Citrus Sinensis ID: 018348
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 357 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.983 | 0.720 | 0.809 | 1e-175 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.977 | 0.681 | 0.650 | 1e-138 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.941 | 0.722 | 0.454 | 4e-85 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.521 | 0.478 | 0.317 | 4e-22 | |
| Q9LFP7 | 493 | Probable receptor-like pr | no | no | 0.498 | 0.361 | 0.336 | 1e-21 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.504 | 0.439 | 0.343 | 2e-21 | |
| O48814 | 395 | Serine/threonine-protein | no | no | 0.526 | 0.475 | 0.315 | 4e-21 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.515 | 0.446 | 0.341 | 4e-21 | |
| O49839 | 426 | Protein kinase 2A, chloro | no | no | 0.560 | 0.469 | 0.314 | 3e-20 | |
| Q9SRH7 | 490 | Receptor-like serine/thre | no | no | 0.498 | 0.363 | 0.321 | 9e-20 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 615 bits (1585), Expect = e-175, Method: Compositional matrix adjust.
Identities = 284/351 (80%), Positives = 316/351 (90%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHWE+ PMKWAMRLRV LH+AQALEYCTSKGRALYHDLNAYR+LFD+D N
Sbjct: 135 MPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDAN 194
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS
Sbjct: 195 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRN+QML DS LEGQF+ DDGTEL+RLASRCLQYEPRERPNPKSLV+A+ PLQ
Sbjct: 255 HALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQ 314
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
K+ E+ SH L+G+P+SA+ + LSPLGEAC R DLTAIHEI+EK+ YKDDEG ELSFQM
Sbjct: 315 KDLEIASHQLLGVPNSATTTALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQM 374
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WTDQMQ+TL KKKGD AFR KD AIECY+QFI+ GTM SPTV+AR+SLCYLM+DMP+
Sbjct: 375 WTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPR 434
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351
+ALN+AMQAQ+ISP WHIASYLQA ALSA+G ENEA ALK+G LE+K+N
Sbjct: 435 EALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAMLESKRN 485
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 231/355 (65%), Positives = 283/355 (79%), Gaps = 6/355 (1%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPN+TLAKHLFHWE ++WAMRLRV ++A+AL+YC+++GR LYHDLNAYR+LFDEDG+
Sbjct: 152 MPNDTLAKHLFHWENQTIEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGD 211
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMKNSRDGKSYSTNLA+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPS
Sbjct: 212 PRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPS 271
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALD+IR +N+ +L DS LEG+F+ ++ T +V LAS+CLQYEPRERPN K LV L+PLQ
Sbjct: 272 HALDMIRGKNIILLMDSHLEGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQ 331
Query: 181 KETEVPSHVLMGIPH-----SASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANE 235
+++VPS+V++GI S PLSPLGEACSR DLTAIH+IL Y+DDEG NE
Sbjct: 332 TKSDVPSYVMLGIKKQEEAPSTPQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NE 390
Query: 236 LSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM 295
LSFQ WT QM++ L+++K+GD +FR+KD K AI+CY+QFID GTMVSPTV+ RRSLCYL+
Sbjct: 391 LSFQEWTQQMKDMLDARKRGDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLL 450
Query: 296 SDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350
D P AL DAMQAQ + P W A Y+Q+ AL+ + M +A L E LE K+
Sbjct: 451 CDQPDAALRDAMQAQCVYPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 315 bits (807), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/354 (45%), Positives = 228/354 (64%), Gaps = 18/354 (5%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M N+TLAK LF + M W++RLRV +A+AL+YC + G A Y++L+AY++LFDEDG+
Sbjct: 126 MANDTLAKRLFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGD 185
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
LS FGLMK + + + TG V PE+VIY FGT+L++LLSGK IPPS
Sbjct: 186 ACLSCFGLMKEINNDQ-------------ITTGSVNPENVIYRFGTVLVNLLSGKQIPPS 232
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HA ++I +N+ L D L+G+F+ D+ + +LAS+CL+YE +E PN K +V L LQ
Sbjct: 233 HAPEMIHRKNVFKLMDPYLKGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQ 292
Query: 181 KETEVPSHVLMGIPH----SASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANEL 236
TE PS+ ++ + + ++S S LSPLGEAC R DL +IH IL Y DD+ + EL
Sbjct: 293 TRTEAPSYEVVEMTNQEKDASSSSNLSPLGEACLRMDLASIHSILVLAGYDDDKDII-EL 351
Query: 237 SFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS 296
SF+ W +++E + ++ GD AF ++D K AI CY+QF++ ++V P+VYARRSL YL
Sbjct: 352 SFEEWIQEVKELQDVRRNGDRAFVEQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFC 411
Query: 297 DMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350
D P+ AL D M AQ + P W A YLQ+ AL+ + M ++ LKE LE KK
Sbjct: 412 DEPEKALLDGMHAQGVFPDWPTAFYLQSVALAKLDMNTDSADTLKEAALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 107/214 (50%), Gaps = 28/214 (13%)
Query: 1 MPNETLAKHLF---HWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFD 56
M +L HLF + + P+ W +R++V L A+ L + S + +Y D+ A IL D
Sbjct: 147 MHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLD 206
Query: 57 EDGNPRLSTFGLMKNSRDG----KSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTL 107
D N +LS FGL +RDG +SY + + PEY+ TG + S +YSFG +
Sbjct: 207 SDFNAKLSDFGL---ARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVV 263
Query: 108 LLDLLSGK----HIPPSHALDLI--------RDRNLQMLTDSCLEGQFTDDDGTELVRLA 155
LL+LL G+ H P+ +L+ R + ++ D+ L Q+ + L +A
Sbjct: 264 LLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIA 323
Query: 156 SRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
+CL +EP+ RP +V AL LQ P++V
Sbjct: 324 VQCLSFEPKSRPTMDQVVRALVQLQDSVVKPANV 357
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 21/199 (10%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDED 58
MP +L HLF + P+ W++R+++ L A+ L + + +Y D IL D D
Sbjct: 228 MPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDAD 286
Query: 59 GNPRLSTFGLMKNSRD-GKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 112
N +LS FGL K++ D GK++ + + PEY+ TG +T +S +YSFG +LL++L
Sbjct: 287 YNAKLSDFGLAKDAPDEGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 346
Query: 113 SG-----KHIPPS-HAL------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 160
+G K+ P H L L+ R L D LEG F+ ++ +LA++CL
Sbjct: 347 TGRRSMDKNRPNGEHNLVEWARPHLLDKRRFYRLLDPRLEGHFSIKGAQKVTQLAAQCLS 406
Query: 161 YEPRERPNPKSLVTALSPL 179
+P+ RP +V AL PL
Sbjct: 407 RDPKIRPKMSDVVEALKPL 425
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 108/201 (53%), Gaps = 21/201 (10%)
Query: 1 MPNETLAKHLFHWETH--PMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDE 57
MP +L HLF + P+ W +RL+V L A+ L + +S+ R +Y D IL D
Sbjct: 154 MPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDS 213
Query: 58 DGNPRLSTFGLMKNSRDG-KSY-STNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDL 111
+ N +LS FGL K+ G KS+ ST + + PEYL TG +T +S +YSFG +LL+L
Sbjct: 214 EYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLEL 273
Query: 112 LSGKHIP----PSHALD--------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159
LSG+ PS + L+ R + + D+ L+ Q++ ++ ++ L+ RCL
Sbjct: 274 LSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCL 333
Query: 160 QYEPRERPNPKSLVTALSPLQ 180
E + RPN +V+ L +Q
Sbjct: 334 TTEIKLRPNMSEVVSHLEHIQ 354
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 21/209 (10%)
Query: 1 MPNETLAKHLFHWETH--PMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDE 57
M +L HLF + P+ W +R+ V L A+ L + S + +Y D+ A IL D
Sbjct: 153 MQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDA 212
Query: 58 DGNPRLSTFGLMKNSRDGK-SYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL 111
D N +LS FGL ++ G SY + + PEY+ +G + S +YSFG LLL++
Sbjct: 213 DYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEI 272
Query: 112 LSGK----HIPPSHALDLI--------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159
LSGK H P+ +L+ R + ++ D+ L+ Q+ ++ + +A +CL
Sbjct: 273 LSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCL 332
Query: 160 QYEPRERPNPKSLVTALSPLQKETEVPSH 188
+EP+ RP +V AL LQ PS
Sbjct: 333 SFEPKSRPTMDQVVRALQQLQDNLGKPSQ 361
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Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 111/205 (54%), Gaps = 21/205 (10%)
Query: 1 MPNETLAKHLFHWETH--PMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDE 57
MP +L HLF ++ P+ W +RL+V L A+ L + ++ +Y D IL D
Sbjct: 155 MPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDS 214
Query: 58 DGNPRLSTFGLMKNSRDG-KSY-STNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDL 111
+ N +LS FGL K+ G KS+ ST + + PEYL TG +T +S +YS+G +LL++
Sbjct: 215 EYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEV 274
Query: 112 LSG-----KHIPPSH------ALDLIRD-RNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159
LSG K+ PP A L+ + R L + D+ L+ Q++ ++ ++ LA RCL
Sbjct: 275 LSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCL 334
Query: 160 QYEPRERPNPKSLVTALSPLQKETE 184
+E + RPN +V+ L +Q E
Sbjct: 335 TFEIKLRPNMNEVVSHLEHIQTLNE 359
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 110/232 (47%), Gaps = 32/232 (13%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDG 59
MP +L HLF P+ WA+R++V + A+ L + +K + +Y D A IL D D
Sbjct: 172 MPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADF 231
Query: 60 NPRLSTFGLMKN--SRDGKSYSTNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
N +LS FGL K + D ST + + PEY+ TGR+T +S +YSFG +LL+L+S
Sbjct: 232 NAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELIS 291
Query: 114 GKHIPPSHALD-----------------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156
G+ A+D L R L + D+ L GQ+ LA
Sbjct: 292 GR-----RAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLAL 346
Query: 157 RCLQYEPRERPNPKSLVTALSPLQKETEVPS-HVLMGIP--HSASVSPLSPL 205
+CL + + RP ++ L L+ + + H M P H +SV SP+
Sbjct: 347 QCLNPDAKLRPKMSEVLVTLEQLESVAKPGTKHTQMESPRFHHSSVMQKSPV 398
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SRH7|Y3130_ARATH Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana GN=At3g01300 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 21/199 (10%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR--ALYHDLNAYRILFDED 58
MP +L HLF + P+ W++R+++ L A+ L + + +Y D IL D +
Sbjct: 222 MPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDGE 280
Query: 59 GNPRLSTFGLMKNSRD-GKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 112
N +LS FGL K++ D GK++ + + PEY+ TG +T +S +YSFG +LL++L
Sbjct: 281 YNAKLSDFGLAKDAPDEGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
Query: 113 SG-----KHIPPS-HAL------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 160
+G K+ P H L L+ R L D LEG F+ ++ +LA++CL
Sbjct: 341 TGRRSMDKNRPNGEHNLVEWARPHLLDKRRFYRLLDPRLEGHFSVKGAQKVTQLAAQCLS 400
Query: 161 YEPRERPNPKSLVTALSPL 179
+ + RP +V L PL
Sbjct: 401 RDSKIRPKMSEVVEVLKPL 419
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 357 | ||||||
| 225454188 | 491 | PREDICTED: probable serine/threonine-pro | 1.0 | 0.727 | 0.904 | 0.0 | |
| 356520418 | 491 | PREDICTED: probable serine/threonine-pro | 1.0 | 0.727 | 0.876 | 0.0 | |
| 356504529 | 491 | PREDICTED: probable serine/threonine-pro | 0.988 | 0.718 | 0.881 | 0.0 | |
| 255541562 | 493 | receptor protein kinase, putative [Ricin | 1.0 | 0.724 | 0.868 | 0.0 | |
| 224064025 | 491 | predicted protein [Populus trichocarpa] | 1.0 | 0.727 | 0.854 | 0.0 | |
| 224127648 | 491 | predicted protein [Populus trichocarpa] | 1.0 | 0.727 | 0.851 | 0.0 | |
| 357507281 | 492 | hypothetical protein MTR_7g077150 [Medic | 1.0 | 0.725 | 0.849 | 0.0 | |
| 225426412 | 488 | PREDICTED: probable serine/threonine-pro | 0.991 | 0.725 | 0.864 | 0.0 | |
| 297814269 | 490 | kinase family protein [Arabidopsis lyrat | 0.983 | 0.716 | 0.855 | 0.0 | |
| 22328189 | 489 | BR-signaling kinase 3 [Arabidopsis thali | 0.985 | 0.719 | 0.852 | 0.0 |
| >gi|225454188|ref|XP_002272416.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297745267|emb|CBI40347.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/357 (90%), Positives = 340/357 (95%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHWET PMKWAMRLRVVLHLAQALEYCT +GRALYHDLNAYRILFDEDGN
Sbjct: 135 MPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTGRGRALYHDLNAYRILFDEDGN 194
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS
Sbjct: 195 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRNLQMLTDSCLEGQFT+DDGTELVRLASRCLQYEPRERPNPKSLV AL+PLQ
Sbjct: 255 HALDLIRDRNLQMLTDSCLEGQFTNDDGTELVRLASRCLQYEPRERPNPKSLVAALTPLQ 314
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
KETEVPSHVLMGIPHSAS SPLSPLGEACSR DLTAIHEILE + YKDDEG+ NELSFQM
Sbjct: 315 KETEVPSHVLMGIPHSASFSPLSPLGEACSRMDLTAIHEILESVGYKDDEGMTNELSFQM 374
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WTDQMQETLNSKKKGD AFRQKD + AI+CYTQFID GTMVSPTV ARRSLCYLMSDMPQ
Sbjct: 375 WTDQMQETLNSKKKGDAAFRQKDFRAAIDCYTQFIDVGTMVSPTVCARRSLCYLMSDMPQ 434
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 357
+ALNDAMQAQ+ISP+WHIASYLQAAAL+ +GMENEAQ ALK+GTTLEA++N+ +GQK
Sbjct: 435 EALNDAMQAQVISPVWHIASYLQAAALTGLGMENEAQAALKDGTTLEAQRNTPSGQK 491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520418|ref|XP_003528859.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/357 (87%), Positives = 338/357 (94%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHWET PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR+LFDEDGN
Sbjct: 135 MPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGN 194
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS
Sbjct: 195 PRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALD+IR RNLQMLTDSCLEGQF+DDDGTELVRLASRCLQYEPRERPNPKSLV AL+PLQ
Sbjct: 255 HALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVVALAPLQ 314
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
KETEVPSHVLMGI HS + + LSPLGEACSR+DLTAI E+LE I YKDDEGVANELSF M
Sbjct: 315 KETEVPSHVLMGIQHSTTFASLSPLGEACSRKDLTAIQEVLESIGYKDDEGVANELSFHM 374
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WTDQMQ+TLN KKKGDVAFRQKD + AIECY+QFIDAGTMVSPTVYARRSLCYL+SDMPQ
Sbjct: 375 WTDQMQDTLNCKKKGDVAFRQKDFRLAIECYSQFIDAGTMVSPTVYARRSLCYLISDMPQ 434
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 357
++LNDA+QAQI+SP+WHIASYLQ+ AL+ +GMENEAQ ALKEGTT+E+K+N+T QK
Sbjct: 435 ESLNDAIQAQIVSPVWHIASYLQSVALTGLGMENEAQAALKEGTTMESKRNATPKQK 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504529|ref|XP_003521048.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/353 (88%), Positives = 336/353 (95%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHWET PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR+LFDEDGN
Sbjct: 135 MPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGN 194
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS
Sbjct: 195 PRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALD+IR RNLQMLTDSCLEGQF+DDDGTELVRLASRCLQYEPRERPNPKSLV AL+PLQ
Sbjct: 255 HALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQ 314
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
KETEV SH+LMGI HS + + LSPLGEACSR+DLTAIHE+LE + YKDDEGVANELSFQM
Sbjct: 315 KETEVLSHILMGIQHSTTFASLSPLGEACSRKDLTAIHEVLESLGYKDDEGVANELSFQM 374
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WTDQMQ+TLN KKKGDVAFRQKD + AIECY+QFID GTMVSPTVYARRSLCYL+SDMPQ
Sbjct: 375 WTDQMQDTLNCKKKGDVAFRQKDFRLAIECYSQFIDTGTMVSPTVYARRSLCYLISDMPQ 434
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353
+ALNDAMQA++ISP+WHIASYLQ+ AL+ +GMENEAQ ALKEGTTLE+K+N+T
Sbjct: 435 EALNDAMQAEVISPVWHIASYLQSVALTGLGMENEAQAALKEGTTLESKRNAT 487
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541562|ref|XP_002511845.1| receptor protein kinase, putative [Ricinus communis] gi|223549025|gb|EEF50514.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/357 (86%), Positives = 339/357 (94%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+PNETLAKHLFHWET PMKWAMRLRV LHLA+ALEYCTSKGRALYHDLNAYRILFDEDGN
Sbjct: 137 LPNETLAKHLFHWETQPMKWAMRLRVALHLAEALEYCTSKGRALYHDLNAYRILFDEDGN 196
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLL+DLLSGKHIPP+
Sbjct: 197 PRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLVDLLSGKHIPPN 256
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRNLQMLTDSCLEGQF++DDGTELVRLASRCLQYE RERP+ KSLV AL+PLQ
Sbjct: 257 HALDLIRDRNLQMLTDSCLEGQFSNDDGTELVRLASRCLQYELRERPSSKSLVAALTPLQ 316
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
KETEVPSHVLMGIPHSAS+SPLSP+GEACSR+DLTAIHEIL+ + YKDDEGV NELSFQM
Sbjct: 317 KETEVPSHVLMGIPHSASLSPLSPIGEACSRKDLTAIHEILDGLGYKDDEGVTNELSFQM 376
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WTD+MQETL KKKGD AF+QKDL+DAIECYTQFIDAGTMVSPT++ARRSL +LM+DMPQ
Sbjct: 377 WTDEMQETLTFKKKGDSAFKQKDLRDAIECYTQFIDAGTMVSPTLFARRSLSFLMTDMPQ 436
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 357
+ALNDAMQAQ+ISP+WH+ASYLQA AL +GME EAQVALKEGT LEA+KN+T+ QK
Sbjct: 437 EALNDAMQAQVISPVWHVASYLQAVALGVLGMETEAQVALKEGTNLEAQKNATSEQK 493
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064025|ref|XP_002301354.1| predicted protein [Populus trichocarpa] gi|222843080|gb|EEE80627.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/357 (85%), Positives = 333/357 (93%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M NETLAKHLFHWET P+KW MRLRVVLHLA+ALEYCTSKGRALYHDLNAYRILFDEDGN
Sbjct: 135 MLNETLAKHLFHWETQPIKWPMRLRVVLHLAEALEYCTSKGRALYHDLNAYRILFDEDGN 194
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
P+LS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS
Sbjct: 195 PKLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRNLQMLTDSCLEGQF+ DDGTELVRLASRCLQYE RERP+ KSLV AL+PLQ
Sbjct: 255 HALDLIRDRNLQMLTDSCLEGQFSSDDGTELVRLASRCLQYELRERPSLKSLVAALTPLQ 314
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
KE +VPSH+LMGIPH AS SPLSP GEACSRRDLTAI+EIL+ I YKDD+GVANELSFQM
Sbjct: 315 KENDVPSHILMGIPHGASSSPLSPFGEACSRRDLTAINEILDNIGYKDDQGVANELSFQM 374
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WTD+MQETLN+KKKGD AF+QKD + AIECYTQFID GTMVSPTV+ARRSL YLMSD+PQ
Sbjct: 375 WTDEMQETLNTKKKGDSAFKQKDYRIAIECYTQFIDVGTMVSPTVFARRSLSYLMSDLPQ 434
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 357
+AL+DAMQAQ+ISP+WH+ASYLQA AL+ +GMENEA ALKEGT LEA+KN+ +GQK
Sbjct: 435 EALSDAMQAQVISPVWHVASYLQAVALATLGMENEAHAALKEGTNLEAEKNANSGQK 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127648|ref|XP_002320126.1| predicted protein [Populus trichocarpa] gi|222860899|gb|EEE98441.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/357 (85%), Positives = 332/357 (92%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHWET P+KWAMRLRVVLHLA+ALEYCTSKGRALYHDLNAYRILFDEDGN
Sbjct: 135 MPNETLAKHLFHWETQPIKWAMRLRVVLHLAEALEYCTSKGRALYHDLNAYRILFDEDGN 194
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
P+LS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLD LSGKHIPPS
Sbjct: 195 PKLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDHLSGKHIPPS 254
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRNLQMLTDSCLEGQF++DDGTELVRLASRCLQYE RERP+ K LV AL+PLQ
Sbjct: 255 HALDLIRDRNLQMLTDSCLEGQFSNDDGTELVRLASRCLQYELRERPSLKFLVAALTPLQ 314
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
KET+V SH+LMGIPHSAS SPLSP GEAC R+DLTAIHEIL+ I YKDD+GVANELSFQM
Sbjct: 315 KETDVASHILMGIPHSASSSPLSPFGEACLRKDLTAIHEILDNIGYKDDQGVANELSFQM 374
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WTD+MQETLN+KKKGD +F+QKD + AIECYTQFID GTMVSPTV+ARRSL YLMSDMPQ
Sbjct: 375 WTDEMQETLNTKKKGDASFKQKDFRVAIECYTQFIDVGTMVSPTVFARRSLSYLMSDMPQ 434
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 357
+ L+DAMQAQ+ISP+WH+ASYLQA AL+ +GMENEA ALKEGT +EAKKN +GQK
Sbjct: 435 EGLSDAMQAQVISPVWHVASYLQAVALATLGMENEAHAALKEGTNIEAKKNQDSGQK 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507281|ref|XP_003623929.1| hypothetical protein MTR_7g077150 [Medicago truncatula] gi|355498944|gb|AES80147.1| hypothetical protein MTR_7g077150 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/358 (84%), Positives = 335/358 (93%), Gaps = 1/358 (0%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHW++ PMKWAMRLRVVLHLA+ALEYCTS GRALYHDLNAYR+LFDEDGN
Sbjct: 135 MPNETLAKHLFHWDSQPMKWAMRLRVVLHLAEALEYCTSNGRALYHDLNAYRVLFDEDGN 194
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS
Sbjct: 195 PRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRN+QMLTDSCLEGQF++DDGTELVRLASRCLQYEPRERPN KSLV AL+PLQ
Sbjct: 255 HALDLIRDRNIQMLTDSCLEGQFSEDDGTELVRLASRCLQYEPRERPNTKSLVAALAPLQ 314
Query: 181 KETEVPSHVLMGIPHSASVSP-LSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQ 239
KETEVPSH LMGI HSA++S LSPLG+ACSR+DLTAIHE+LE I YKDD+GVANELSFQ
Sbjct: 315 KETEVPSHSLMGIQHSATISASLSPLGDACSRKDLTAIHEVLENIGYKDDDGVANELSFQ 374
Query: 240 MWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMP 299
MWTDQMQ++LN K+KGD AFR KD K AIECYTQFID GTMVSPTV+ARRSLCYL++DMP
Sbjct: 375 MWTDQMQDSLNCKQKGDAAFRHKDFKLAIECYTQFIDVGTMVSPTVHARRSLCYLINDMP 434
Query: 300 QDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 357
Q+A+NDAMQAQ+ISP+WHIASYLQ+ +LS +GM NEAQVAL EGTTLE K+N+ G+K
Sbjct: 435 QEAMNDAMQAQVISPLWHIASYLQSVSLSGLGMVNEAQVALMEGTTLEEKRNTPTGKK 492
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426412|ref|XP_002270065.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297742525|emb|CBI34674.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/354 (86%), Positives = 328/354 (92%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPN+TLAKHLFHWET PMKWAMRLRV L+LAQALEYCTSKGRALYHDLNAYRI+FD+DG+
Sbjct: 135 MPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRIVFDDDGD 194
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS FG+MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV+YSFGTLLLDLLSGKHIPPS
Sbjct: 195 PRLSCFGMMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRN+QMLTDSCLEGQF+ DDGTELVRLASRCLQYEPRERPNPKSLV AL PLQ
Sbjct: 255 HALDLIRDRNIQMLTDSCLEGQFSSDDGTELVRLASRCLQYEPRERPNPKSLVAALIPLQ 314
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
KETEVPSHVLMG+P S + PLSPLGEAC R DLTAIHEILEK+ YKDDEG ELSFQM
Sbjct: 315 KETEVPSHVLMGMPQSGATLPLSPLGEACLRMDLTAIHEILEKLGYKDDEGATTELSFQM 374
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WT+QMQETLNSKKKGDVAFR KD + AIECYTQFID GTMVSPTV+ARRSLCYLMSDMPQ
Sbjct: 375 WTNQMQETLNSKKKGDVAFRHKDFRAAIECYTQFIDVGTMVSPTVFARRSLCYLMSDMPQ 434
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354
+ALNDA+QAQ+ISPIWHIASYLQA ALSA+G ENE++V LKEG+ LE KKN TA
Sbjct: 435 EALNDAVQAQVISPIWHIASYLQAVALSALGRENESEVTLKEGSVLEEKKNKTA 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297814269|ref|XP_002875018.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320855|gb|EFH51277.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/352 (85%), Positives = 333/352 (94%), Gaps = 1/352 (0%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHWET PMKW MRLRVVL+LAQALEYCTSKGR LYHDLNAYR+LFDE+ N
Sbjct: 135 MPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECN 194
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+TPESVIYSFGTLLLDLLSGKHIPPS
Sbjct: 195 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRNLQ LTDSCL+GQF+D DGTELVRLASRCLQYE RERPN KSLVTAL+PLQ
Sbjct: 255 HALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQ 314
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
K+TEVPSHVLMG+PHS SVSPLSPLGEACSRRDLTA+ EIL+K+ YKDDEGV NELSFQM
Sbjct: 315 KDTEVPSHVLMGLPHSGSVSPLSPLGEACSRRDLTAMLEILDKLGYKDDEGVTNELSFQM 374
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WTDQMQE+LNSKKKGDVAFRQKD ++AIECYTQFID G M+SPTV ARRSLCYLMSDMP+
Sbjct: 375 WTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPK 433
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 352
+AL+DA+QAQ+ISP+WH+ASYLQ+A+L+ +GME E+Q+ALKEG+ LEAK+N+
Sbjct: 434 EALDDAIQAQVISPVWHVASYLQSASLAFLGMEKESQIALKEGSNLEAKRNA 485
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22328189|ref|NP_191980.2| BR-signaling kinase 3 [Arabidopsis thaliana] gi|17064838|gb|AAL32573.1| Unknown protein [Arabidopsis thaliana] gi|20259854|gb|AAM13274.1| unknown protein [Arabidopsis thaliana] gi|332656524|gb|AEE81924.1| BR-signaling kinase 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/353 (85%), Positives = 328/353 (92%), Gaps = 1/353 (0%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHWET PMKW MRLRVVL+LAQALEYCTSKGR LYHDLNAYR+LFDE+ N
Sbjct: 134 MPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECN 193
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+TPESVIYSFGTLLLDLLSGKHIPPS
Sbjct: 194 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPS 253
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRNLQ LTDSCL+GQF+D DGTELVRLASRCLQYE RERPN KSLVTAL+PLQ
Sbjct: 254 HALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQ 313
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
KETEV SHVLMG+PHS SVSPLSPLGEACSRRDLTA+ EILEK+ YKDDEGV NELSF M
Sbjct: 314 KETEVLSHVLMGLPHSGSVSPLSPLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHM 373
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WTDQMQE+LNSKKKGDVAFRQKD ++AIECYTQFID G M+SPTV ARRSLCYLMSDMP+
Sbjct: 374 WTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPK 432
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353
+AL+DA+QAQ+ISP+WH+ASYLQ+A+L +GME E+Q+ALKEG+ LEAK N
Sbjct: 433 EALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIALKEGSNLEAKMNGV 485
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 357 | ||||||
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.980 | 0.715 | 0.857 | 1.3e-164 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.983 | 0.720 | 0.834 | 1e-162 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.983 | 0.720 | 0.809 | 1.1e-156 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.983 | 0.717 | 0.778 | 3.7e-151 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.985 | 0.718 | 0.756 | 4.6e-144 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.980 | 0.724 | 0.739 | 7.2e-139 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.977 | 0.681 | 0.650 | 4.3e-125 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.988 | 0.721 | 0.608 | 4.2e-118 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.974 | 0.729 | 0.630 | 3.2e-113 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.974 | 0.697 | 0.594 | 1.9e-108 |
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1602 (569.0 bits), Expect = 1.3e-164, P = 1.3e-164
Identities = 301/351 (85%), Positives = 328/351 (93%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHWET PMKW MRLRVVL+LAQALEYCTSKGR LYHDLNAYR+LFDE+ N
Sbjct: 134 MPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECN 193
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+TPESVIYSFGTLLLDLLSGKHIPPS
Sbjct: 194 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPS 253
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRNLQ LTDSCL+GQF+D DGTELVRLASRCLQYE RERPN KSLVTAL+PLQ
Sbjct: 254 HALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQ 313
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
KETEV SHVLMG+PHS SVSPLSPLGEACSRRDLTA+ EILEK+ YKDDEGV NELSF M
Sbjct: 314 KETEVLSHVLMGLPHSGSVSPLSPLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHM 373
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WTDQMQE+LNSKKKGDVAFRQKD ++AIECYTQFID G M+SPTV ARRSLCYLMSDMP+
Sbjct: 374 WTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPK 432
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351
+AL+DA+QAQ+ISP+WH+ASYLQ+A+L +GME E+Q+ALKEG+ LEAK N
Sbjct: 433 EALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIALKEGSNLEAKMN 483
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1584 (562.7 bits), Expect = 1.0e-162, P = 1.0e-162
Identities = 293/351 (83%), Positives = 323/351 (92%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHWE+ PMKWAMRLRV LH+AQALEYCT KGRALYHDLNAYR+LFD+D N
Sbjct: 135 MPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSN 194
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV+YS+GTLLLDLLSGKHIPPS
Sbjct: 195 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRN+QML DSCLEGQF+ DDGTEL+RLASRCLQYEPRERPNPKSLVTA+ PLQ
Sbjct: 255 HALDLIRDRNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQ 314
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
K+ E PSH LMGIP SAS +PLSPLGEAC R DLTAIHEILEK+SYKDDEG A ELSFQM
Sbjct: 315 KDLETPSHQLMGIPSSASTTPLSPLGEACLRTDLTAIHEILEKLSYKDDEGAATELSFQM 374
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WT+QMQ++LN KKKGDVAFR K+ +AI+CY+QFI+ GTMVSPTVYARRSLCYLM++MPQ
Sbjct: 375 WTNQMQDSLNFKKKGDVAFRHKEFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMNEMPQ 434
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351
+ALNDAMQAQ+ISP WHIASYLQA ALSA+G ENEA ALK+G+ LE+K+N
Sbjct: 435 EALNDAMQAQVISPAWHIASYLQAVALSALGQENEAHAALKDGSMLESKRN 485
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
Identities = 284/351 (80%), Positives = 316/351 (90%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHWE+ PMKWAMRLRV LH+AQALEYCTSKGRALYHDLNAYR+LFD+D N
Sbjct: 135 MPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDAN 194
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS
Sbjct: 195 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRN+QML DS LEGQF+ DDGTEL+RLASRCLQYEPRERPNPKSLV+A+ PLQ
Sbjct: 255 HALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQ 314
Query: 181 KETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQM 240
K+ E+ SH L+G+P+SA+ + LSPLGEAC R DLTAIHEI+EK+ YKDDEG ELSFQM
Sbjct: 315 KDLEIASHQLLGVPNSATTTALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQM 374
Query: 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ 300
WTDQMQ+TL KKKGD AFR KD AIECY+QFI+ GTM SPTV+AR+SLCYLM+DMP+
Sbjct: 375 WTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPR 434
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351
+ALN+AMQAQ+ISP WHIASYLQA ALSA+G ENEA ALK+G LE+K+N
Sbjct: 435 EALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAMLESKRN 485
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1475 (524.3 bits), Expect = 3.7e-151, P = 3.7e-151
Identities = 278/357 (77%), Positives = 319/357 (89%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MP ETL+KHLFHW++ PMKW+MRLRV L+LAQALEYC+SKGRALYHDLNAYRILFD+DGN
Sbjct: 131 MPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGN 190
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESV+YSFGTLLLDLLSGKHIPPS
Sbjct: 191 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 250
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIR +N ML DSCL+G F++DDGT+LVRLASRCLQYE RERPN KSLV++L+PLQ
Sbjct: 251 HALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQ 310
Query: 181 KETEVPSHVLMGIPHSASVSP-----LSPLGEACSRRDLTAIHEILEKISYKDDEGVANE 235
KET++PSHVLMGIPH A+ SP L+PLG+ACSR DLTAIHEILEK+ YKDDEGVANE
Sbjct: 311 KETDIPSHVLMGIPHGAA-SPKETTSLTPLGDACSRHDLTAIHEILEKVGYKDDEGVANE 369
Query: 236 LSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM 295
LSFQ+WTDQ+QETLNSKK+GD AF+ KD A+ECYTQFI+ GTMVSPTV+ARR LCYLM
Sbjct: 370 LSFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLM 429
Query: 296 SDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 352
S+MPQ+AL DAMQAQ++SP W A YLQAAAL ++GM+ +A LK+GT+LEAKK++
Sbjct: 430 SNMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLKDGTSLEAKKHN 486
|
|
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1408 (500.7 bits), Expect = 4.6e-144, P = 4.6e-144
Identities = 270/357 (75%), Positives = 308/357 (86%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MP+ETLAKHLFHWE +PMKWAMRLRV L LAQALEYC++KGRALYHDLNAYR+LFD+DGN
Sbjct: 132 MPHETLAKHLFHWENNPMKWAMRLRVALCLAQALEYCSNKGRALYHDLNAYRVLFDKDGN 191
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV++SFGT+LLDL+SGKHIPPS
Sbjct: 192 PRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVFSFGTVLLDLMSGKHIPPS 251
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIR +N ML DS LEG F+++DGTELVRLA+RCLQYE RERPN KSLVT+L LQ
Sbjct: 252 HALDLIRGKNCAMLMDSALEGHFSNEDGTELVRLATRCLQYEARERPNVKSLVTSLVTLQ 311
Query: 181 KETEVPSHVLMGIPHSASV---SPLS--PLGEACSRRDLTAIHEILEKISYKDDEGVANE 235
KE++V S+VLMGIPH SPLS P G+AC R DLTAI EIL KI YKDDEG+ANE
Sbjct: 312 KESDVASYVLMGIPHETEAEEESPLSLTPFGDACLRVDLTAIQEILSKIGYKDDEGIANE 371
Query: 236 LSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM 295
LSFQMWT+QMQE+LNSKK+GD+AFR KD A++CYTQFID GTMVSPTV+ARR L YLM
Sbjct: 372 LSFQMWTNQMQESLNSKKQGDLAFRSKDFTTAVDCYTQFIDGGTMVSPTVHARRCLSYLM 431
Query: 296 SDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 352
+D Q+AL DA+QAQ++SP W A YLQAA L +GME +AQ ALK+GTTLEAKK++
Sbjct: 432 NDNAQEALTDALQAQVVSPDWPTALYLQAACLFKLGMEADAQQALKDGTTLEAKKSN 488
|
|
| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1359 (483.5 bits), Expect = 7.2e-139, P = 7.2e-139
Identities = 264/357 (73%), Positives = 305/357 (85%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHW+T PMKWAMRLRV L++++ALEYC++ G LYHDLNAYR+LFDE+ N
Sbjct: 132 MPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYHDLNAYRVLFDEECN 191
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+T ESVIYSFGTLLLDLL+GKHIPPS
Sbjct: 192 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGTLLLDLLTGKHIPPS 251
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDLIRDRNLQ LTDSCLEGQF+D DGTELVRL S CLQYE RERPN KSLVTAL LQ
Sbjct: 252 HALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARERPNIKSLVTALISLQ 311
Query: 181 KETEVPSHVLMGIPHSAS-VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQ 239
K+TEV SHVLMG+P S + SP SP EACS +DLT++ EILEKI YKDDE +LSF
Sbjct: 312 KDTEVLSHVLMGLPQSGTFASPPSPFAEACSGKDLTSMVEILEKIGYKDDE----DLSF- 366
Query: 240 MWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMP 299
MWT+QMQE +NSKKKGD+AFR+KD +AIE YTQF+D G M+S TV RRS YLMS+M
Sbjct: 367 MWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLG-MISATVLVRRSQSYLMSNMA 425
Query: 300 QDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQ 356
++AL+DAM+AQ ISP+W++A YLQ+AALS +GME E+Q+AL EG+ LEA+K S + Q
Sbjct: 426 KEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTEGSILEARKISASTQ 482
|
|
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
Identities = 231/355 (65%), Positives = 283/355 (79%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPN+TLAKHLFHWE ++WAMRLRV ++A+AL+YC+++GR LYHDLNAYR+LFDEDG+
Sbjct: 152 MPNDTLAKHLFHWENQTIEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGD 211
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMKNSRDGKSYSTNLA+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPS
Sbjct: 212 PRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPS 271
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALD+IR +N+ +L DS LEG+F+ ++ T +V LAS+CLQYEPRERPN K LV L+PLQ
Sbjct: 272 HALDMIRGKNIILLMDSHLEGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQ 331
Query: 181 KETEVPSHVLMGIPH-----SASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANE 235
+++VPS+V++GI S PLSPLGEACSR DLTAIH+IL Y+DDEG NE
Sbjct: 332 TKSDVPSYVMLGIKKQEEAPSTPQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NE 390
Query: 236 LSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM 295
LSFQ WT QM++ L+++K+GD +FR+KD K AI+CY+QFID GTMVSPTV+ RRSLCYL+
Sbjct: 391 LSFQEWTQQMKDMLDARKRGDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLL 450
Query: 296 SDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350
D P AL DAMQAQ + P W A Y+Q+ AL+ + M +A L E LE K+
Sbjct: 451 CDQPDAALRDAMQAQCVYPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
|
|
| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 216/355 (60%), Positives = 279/355 (78%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPN+TL+KHLFHWE P+ W MR+R+ ++A+AL+YC + R +YHDLNAYRILFDE+G+
Sbjct: 132 MPNDTLSKHLFHWEKQPLPWDMRVRIADYIAEALDYCNIENRKIYHDLNAYRILFDEEGD 191
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLSTFGLMKNSRDGKSYSTNLA+TPPE+LRTGRV PESVI+S+GT+LLDLLSGKHIPPS
Sbjct: 192 PRLSTFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIFSYGTILLDLLSGKHIPPS 251
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALD+IR +N +L DS LEGQ+ +DD T+LV LAS+CLQ E ++RP+ K L++A++PLQ
Sbjct: 252 HALDIIRGKNALLLMDSSLEGQYANDDATKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQ 311
Query: 181 KETEVPSHVLMGIPHSASVSP--LSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSF 238
K+ EV SHVLMG+P + + P LSPLG+AC++ DL H+IL K Y+D+EG NELSF
Sbjct: 312 KQEEVASHVLMGLPKNTVILPTMLSPLGKACAKMDLATFHDILLKTGYRDEEGAENELSF 371
Query: 239 QMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM 298
Q WT Q+QE LN+KK GD+AFR KD K++IE Y++ + + S TV+ARR+ YLM+D
Sbjct: 372 QEWTQQVQEMLNTKKFGDIAFRDKDFKNSIEYYSKLVGMMPVPSATVFARRAFSYLMTDQ 431
Query: 299 PQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353
+ AL DAMQAQ+ P W A YLQA ALS +GME +AQ L +G +AK+ ++
Sbjct: 432 QELALRDAMQAQVCIPEWPTAFYLQALALSKLGMETDAQDMLNDGAAYDAKRQNS 486
|
|
| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 225/357 (63%), Positives = 267/357 (74%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPNETLAKHLFHWE PMKW MRLRV LH A ALEYC G LYHDLN YRILFD+ GN
Sbjct: 120 MPNETLAKHLFHWEKRPMKWEMRLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGN 179
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
PRLS FGLMK SR+GKSYSTNLAF PPEYLR G V PESV +SFGTLLLDL+SG+HIPP+
Sbjct: 180 PRLSCFGLMKCSREGKSYSTNLAFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPN 239
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDL R +N +L DS L+GQF+D+D TEL+ LASRCL+ EP ERP+ K L++ALS L+
Sbjct: 240 HALDLFRGKNYLVLMDSALDGQFSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLE 299
Query: 181 KETEV-PSHVLMGIPHSASVSP-------LSPLGEACSRRDLTAIHEILEKISY-KDDEG 231
K E+ P+ IP + P L+P GEAC R DL+ +HE+LEK+ Y +DD
Sbjct: 300 KRAELWPNVKEENIPTPSYTEPATKEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVV 359
Query: 232 VANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSL 291
V NE SFQMWT QMQE ++ KK GD AFR KD + AIE YT+F+ +VSPTV ARR L
Sbjct: 360 VTNEFSFQMWTGQMQENMDYKKHGDAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCL 419
Query: 292 CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 348
CYLMSDM ++AL+DAMQ Q+ SP + IA YLQAA L +GME EA+ AL+ G++LEA
Sbjct: 420 CYLMSDMFREALSDAMQTQVASPEFSIALYLQAACLLKLGMEAEAKEALRHGSSLEA 476
|
|
| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 214/360 (59%), Positives = 261/360 (72%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MPN TLAKHLFHWE PMKW MRL+V LH A+ALEYC KG LYHDLN YRI+FD+ G
Sbjct: 139 MPNGTLAKHLFHWEKRPMKWEMRLKVALHTARALEYCNDKGIDLYHDLNPYRIMFDKTGI 198
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120
P+LS FGLMKNS +GK YSTNLAF PPEYLR G V ESV +SFGTLLLDL+SG+HIPP+
Sbjct: 199 PKLSCFGLMKNSHEGKIYSTNLAFAPPEYLRLGTVIAESVTFSFGTLLLDLMSGRHIPPN 258
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
HALDL R +N +L DS L+GQF+D+D TEL+ +ASRC + EP ERP+ K L LS LQ
Sbjct: 259 HALDLFRGKNYLVLMDSALDGQFSDEDRTELIHVASRCFKTEPEERPSIKFLKATLSRLQ 318
Query: 181 KETEV-PSHVLMGI-PHSASV----SP------LSPLGEACSRRDLTAIHEILEKISYKD 228
K ++ P +V + P S ++ P L+P G+ACSR DL++IHE+LEK+ Y++
Sbjct: 319 KRAKLCPINVKRPMSPPSKNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEE 378
Query: 229 DEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYAR 288
D GV NE SFQMWT +MQE ++ KK GD AF KD AIE YT+F+ VSPTV AR
Sbjct: 379 DNGVGNEFSFQMWTGEMQENMDYKKHGDAAFLAKDFDTAIEFYTEFMTGAPTVSPTVLAR 438
Query: 289 RSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 348
R LCYLM++M +AL+DAMQAQ+ SP W I YLQAA L + ME EA+ AL+ G+ LEA
Sbjct: 439 RCLCYLMTEMFSEALSDAMQAQVASPEWPIPLYLQAACLFKLEMEAEAKEALRHGSALEA 498
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 357 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-16 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 9e-13 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-12 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 6e-11 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-10 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-10 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-10 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-09 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 2e-09 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 5e-09 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 7e-09 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 1e-08 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-08 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-08 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 5e-08 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 9e-08 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-07 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-07 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 4e-07 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 4e-06 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 6e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 7e-06 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 7e-06 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-06 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 8e-06 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 1e-05 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 1e-05 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 1e-05 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 2e-05 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 2e-05 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 2e-05 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-05 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 3e-05 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 3e-05 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 3e-05 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 4e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 4e-05 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 4e-05 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 5e-05 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 5e-05 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 5e-05 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 6e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 6e-05 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 6e-05 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 6e-05 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 7e-05 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 8e-05 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 9e-05 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 1e-04 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-04 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 2e-04 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-04 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 3e-04 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 3e-04 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 3e-04 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 3e-04 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 4e-04 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 4e-04 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 5e-04 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 5e-04 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 5e-04 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 5e-04 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 5e-04 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 8e-04 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 8e-04 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 8e-04 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.001 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 0.001 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 0.001 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 0.001 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 0.001 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 0.001 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 0.001 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 0.001 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 0.002 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 0.002 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 0.002 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 0.002 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 0.002 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 0.002 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 0.002 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 0.003 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 0.003 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 0.003 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 0.003 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 0.003 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 0.003 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 0.004 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 0.004 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 0.004 | |
| COG0457 | 291 | COG0457, NrfG, FOG: TPR repeat [General function p | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 1e-16
Identities = 47/180 (26%), Positives = 68/180 (37%), Gaps = 47/180 (26%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDED- 58
+L L E + LR++L + + LEY S G + H DL IL D D
Sbjct: 73 CEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDN 129
Query: 59 GNPRLSTFGLMKNSRDGKSYST----NLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLS 113
G +L+ FGL K KS A+ PE L G + +S I+S G +L +L
Sbjct: 130 GKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-- 187
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
DLIR + LQ +P +RP+ K ++
Sbjct: 188 ------PELKDLIR-----------------------------KMLQKDPEKRPSAKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 9e-13
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDG 75
P+ ++ L + + LEY S G + H DL IL DE+G +++ FGL K
Sbjct: 94 PLSEDEAKKIALQILRGLEYLHSNG--IIHRDLKPENILLDENGVVKIADFGLAKKLLKS 151
Query: 76 KSYSTNLAFTP----PEYLRTGR-VTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIR-- 127
S T TP PE L G P+ ++S G +L +LL+GK + LD ++
Sbjct: 152 SSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLI 211
Query: 128 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
R L + + E L +CL +P +RP + ++
Sbjct: 212 RRILGPPLEF--DEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 3e-12
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNL 82
L+ L +A+ +EY SK + ++ DL A IL EDG ++S FGL + S + +
Sbjct: 103 LQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPV 161
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 141
+T PE L+ + + +S ++S+G LL ++ S G+ P +L +++ C+E
Sbjct: 162 KWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKE---------CVEK 212
Query: 142 QFTDDDGTE----LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
+ + + L + C + EP++RP+ L L+KE
Sbjct: 213 GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLR---EKLEKE 254
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 6e-11
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
+++V + A +EY SK ++ DL A L E ++S FG+ + DG ST
Sbjct: 97 IQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 137
+ +T PE L GR + ES ++SFG LL + S +P ++ + ++ + +
Sbjct: 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYAN----LSNQQTREAIEQ 211
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+ + + RL RC +Y+P +RP+
Sbjct: 212 GVRLPCPELCPDAVYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 60.6 bits (148), Expect = 1e-10
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD 74
+ + L L +A+ +EY SK H DL A L E+ ++S FGL ++ D
Sbjct: 98 KELSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155
Query: 75 GKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALD 124
Y + PE L+ G+ T +S ++SFG LL ++ + G+ + + L+
Sbjct: 156 DDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLE 215
Query: 125 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
++ +C EL +L +C +P +RP LV L
Sbjct: 216 YLKKGYRLPKPPNCPP---------ELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 60.2 bits (147), Expect = 2e-10
Identities = 42/183 (22%), Positives = 64/183 (34%), Gaps = 24/183 (13%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL---NAYRILFDE 57
L L A + + ALEY SKG ++ DL N IL DE
Sbjct: 79 CEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYLHSKGI-VHRDLKPEN---ILLDE 132
Query: 58 DGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
DG+ +L+ FGL + G+ +T + PE L I+S G +L +LL+G
Sbjct: 133 DGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTG 192
Query: 115 K-----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169
K I + +L+R + L +P +R
Sbjct: 193 KPPFPGDDQLLELFKKIGKPKPPFPPPEWD----ISPEAKDLIR---KLLVKDPEKRLTA 245
Query: 170 KSL 172
+
Sbjct: 246 EEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 60.2 bits (147), Expect = 2e-10
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 22/172 (12%)
Query: 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD 74
+ + L L +A+ +EY SK H DL A L E+ ++S FGL ++ D
Sbjct: 97 PKLSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYD 154
Query: 75 GKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALD 124
Y + PE L+ G+ T +S ++SFG LL ++ + G+ + L+
Sbjct: 155 DDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLE 214
Query: 125 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+++ +C EL L +C +P +RP LV L
Sbjct: 215 YLKNGYRLPQPPNCPP---------ELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.5 bits (140), Expect = 2e-09
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 23 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN- 81
L + +A+ +EY SK + ++ DL A L ED ++S FGL ++ D Y
Sbjct: 107 LLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKT 165
Query: 82 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNL 131
+ + PE L+ G T +S ++SFG LL ++ + G + L+ +R
Sbjct: 166 GGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR 225
Query: 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+ C + EL L C Q +P +RP LV L
Sbjct: 226 LPKPEYCPD---------ELYELMLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 2e-09
Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 24 LRVVLHLAQALEYC----TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 79
R++ L AL C L+ DL I D + N +L FGL K S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167
Query: 80 TNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 135
TP PE L +S I+S G L+ +L + PP A RN L
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTA------RNQLQLA 219
Query: 136 DSCLEGQFTDDDG---TELVRLASRCLQYEPRERPNPKSL 172
EG+F +EL + L +P +RP+ + L
Sbjct: 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.0 bits (136), Expect = 5e-09
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 86
+ ALEY S G +Y DL IL D DG+ +L+ FGL K S + TP
Sbjct: 102 IVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL 160
Query: 87 -PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--F 143
PE L +S G LL ++L+GK PP +A + + + + L+ F
Sbjct: 161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGK--PPFYA------EDRKEIYEKILKDPLRF 212
Query: 144 TDDDGTELVRLASRCLQYEPRER 166
+ E L S LQ +P +R
Sbjct: 213 PEFLSPEARDLISGLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 7e-09
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 21 AMRLRVVLHL----AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 76
+ ++ +L + A +EY SK ++ DL A L E+ ++S FG M +G
Sbjct: 89 RLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFG-MSREEEGG 146
Query: 77 SYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALD 124
Y+ + + +T PE L GR T ES ++S+G LL + S P +
Sbjct: 147 IYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE 206
Query: 125 LIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167
I + +M C E E+ RL +C Y+P RP
Sbjct: 207 RI-ESGYRMPAPQLCPE---------EIYRLMLQCWAYDPENRP 240
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 55.9 bits (133), Expect = 1e-08
Identities = 57/274 (20%), Positives = 92/274 (33%), Gaps = 28/274 (10%)
Query: 12 HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-PRLSTFGLMK 70
P+ + L ++ + ALEY SKG ++ D+ IL D DG +L FGL K
Sbjct: 92 IGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAK 150
Query: 71 NSRDGKSYSTN----------LAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKH- 116
D S S+ + PE L + S I+S G L +LL+G
Sbjct: 151 LLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPP 210
Query: 117 -------IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169
S L +I + L + L + L +P+ R +
Sbjct: 211 FEGEKNSSATSQTLKIILELPTPSLASPLSP-SNPELISKAASDLLKKLLAKDPKNRLSS 269
Query: 170 KSLVTA--LSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYK 227
S ++ L+ L+ + S +L + L P EA I
Sbjct: 270 SSDLSHDLLAHLKLKESDLSDLLKPDDSAPLRLSLPPSLEALISS--LNSLAISGSDLKL 327
Query: 228 DDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQ 261
DD + EL+ + + + + R
Sbjct: 328 DDSNFSKELAPNGVSSSPHNSSSLLLSTASSKRS 361
|
Length = 384 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 54.8 bits (133), Expect = 1e-08
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 25/174 (14%)
Query: 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKN-SR 73
+ L++ L +A+ +EY SK H DL A L E+ ++S FGL ++
Sbjct: 97 EKLTLKDLLQMALQIAKGMEYLESKN--FVHRDLAARNCLVTENLVVKISDFGLSRDIYE 154
Query: 74 DGKSYSTNLAFTP-----PEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPSHAL 123
D P PE L+ G+ T +S ++SFG LL ++ + + L
Sbjct: 155 DDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVL 214
Query: 124 DLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+L+ D ++ ++C + EL L +C Y+P +RP LV L
Sbjct: 215 ELLEDGY-RLPRPENCPD---------ELYELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 2e-08
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 18 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 77
+K ++ L A + Y SK ++ DL A L E+ ++S FG+ + DG
Sbjct: 90 LKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY 148
Query: 78 YSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNL 131
S+ L +T PE L GR + ES ++S+G LL + S P P R++
Sbjct: 149 SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE 208
Query: 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
+ SC Q DD + ++ RC Y+P RP S LQKE
Sbjct: 209 KGYRMSC--PQKCPDD---VYKVMQRCWDYKPENRPK-------FSELQKE 247
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 5e-08
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTN 81
L + + ++Y S+ R ++ DL A IL + + ++S FGL K Y
Sbjct: 112 LLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKE 170
Query: 82 LAFTP-----PEYLRTGRVTPESVIYSFGTLLLDLLS-GKH--IPPSHALDLIRDRNLQM 133
+P PE LRT + + S ++SFG L +L + G PP+ L +I QM
Sbjct: 171 PGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQM 230
Query: 134 LTDSCLEGQFTDDDGTELVR----------LASRCLQYEPRERPNPKSLV 173
+ LE +G L R L C + EP++RP+ L+
Sbjct: 231 IVTRLLE---LLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 9e-08
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYL-MSDMPQDALNDAMQAQ 310
K G+ F+ D +AIE Y + ++ + Y +L YL + ++AL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 311 IISP 314
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 1e-07
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 15/148 (10%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNLAFTPPE 88
+ LEY S G ++ D+ A IL DG +L FGL + +++ + + PE
Sbjct: 109 KGLEYLHSNGI-IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPE 167
Query: 89 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 148
+ ++ I+S G ++L GK PP +L + L + G +
Sbjct: 168 VINGKPYDYKADIWSLGITAIELAEGK--PPYS--ELPPMKALFKIAT---NGPPGLRNP 220
Query: 149 ----TELVRLASRCLQYEPRERPNPKSL 172
E +CLQ P +RP + L
Sbjct: 221 EKWSDEFKDFLKKCLQKNPEKRPTAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 14/155 (9%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTP 86
L + + +EY K ++ DL A +L ED ++S FGL K + G S + +T
Sbjct: 109 LDVCEGMEYLEEK-NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTA 167
Query: 87 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDR---NLQMLTDSCLEGQ 142
PE LR + + +S ++SFG LL ++ S +P P L + +M EG
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM---EAPEGC 224
Query: 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177
E+ ++ C + +P +RP K L L+
Sbjct: 225 -----PPEVYKVMKDCWELDPAKRPTFKQLREQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 4e-07
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
G++ ++ D +A+E Y + ++ + Y + Y ++AL D +A
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALE 62
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 349
+ P A Y A +G EA A ++ L+
Sbjct: 63 LDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELDPN 100
|
Length = 100 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 4e-06
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
++ + LEY S + ++ D+ A IL +E+G +L+ FG+ D + + T
Sbjct: 104 ILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGT 162
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 137
P PE ++ ++ I+S G +++ GK I P A+ +I ++ L+D
Sbjct: 163 PFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDP 222
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
+ E +CL +P ERP+ L
Sbjct: 223 -------EKWSPEFNDFVKKCLVKDPEERPSAIQL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 6e-06
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDG 75
+ W +L V LA AL + KG L H ++ A +L + + + +K S G
Sbjct: 98 NISW--KLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153
Query: 76 KSYST--------NLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 126
S + + + PPE + + ++ + +SFGT L ++ SG P S ALD
Sbjct: 154 ISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD-- 210
Query: 127 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177
+ LQ D Q TEL L ++C+ YEP RP+ ++++ L+
Sbjct: 211 SQKKLQFYED---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 7e-06
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+ +A + Y SK R ++ DL A IL D ++ FGLM+ + +
Sbjct: 104 VQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV 162
Query: 82 -LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-----GKHIPPSHALDLIRDRNLQMLT 135
A+ PE LRT + S ++ FG L ++ + + S L I D+ + L
Sbjct: 163 PFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI-DKEGERLE 221
Query: 136 --DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177
++C + ++ + +C + P +RP +L L
Sbjct: 222 RPEACPQ---------DIYNVMLQCWAHNPADRPTFAALREFLP 256
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 7e-06
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 18/178 (10%)
Query: 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 75
H + A L + + + Y S+ ++ DL A +L D D ++ FGL K +G
Sbjct: 102 HKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160
Query: 76 KSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDL 125
Y + + + E L+ + + S ++SFG L +LL+ K PP ++
Sbjct: 161 HEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEM 220
Query: 126 IRDRNLQM----LTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
I + QM L + G + E+ L C + E + RP +SL+ L
Sbjct: 221 IGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPIL 278
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 7e-06
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 18 MKWAMRLRVVLHLAQALEY--CTSKGRALYHDLNAYRILFDEDGNPRL--STFGLMKNSR 73
+ W R ++ + +A+AL + C + +L+ +I+ D P L S GL+
Sbjct: 777 LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLL--CT 834
Query: 74 DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA--------LDL 125
D K + ++ A+ PE T +T +S IY FG +L++LL+GK P+ A ++
Sbjct: 835 DTKCFISS-AYVAPETRETKDITEKSDIYGFGLILIELLTGKS--PADAEFGVHGSIVEW 891
Query: 126 IR----DRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
R D +L M D + G + ++ E++ LA C +P RP ++ L
Sbjct: 892 ARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951
Query: 180 QKET 183
+ +
Sbjct: 952 SRSS 955
|
Length = 968 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 8e-06
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-NL 82
L+ L + +A+EY + ++ DL A +L ED ++S FGL K + + +
Sbjct: 105 LKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS--TNLAFT 85
LA AL++ S G +Y DL IL DE+G+ +L+ FGL K S D K+YS + +
Sbjct: 107 LALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 165
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
PE + T + +SFG L+ ++L+G
Sbjct: 166 APEVVNRRGHTQSADWWSFGVLMFEMLTG 194
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 1e-05
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 76
P++ ++ + + L+Y S+ R ++ D+ A +L E G+ +L+ FG+ D +
Sbjct: 97 PLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155
Query: 77 SYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL- 131
TP PE ++ ++ I+S G ++L G+ PP+ L +R L
Sbjct: 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMRVLFLI 213
Query: 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
+ LEGQ++ CL +PR RP K L+
Sbjct: 214 PKNSPPTLEGQYS----KPFKEFVEACLNKDPRFRPTAKELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 1e-05
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 34 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY 89
L++ SKG +Y DL IL D DG+ +++ FG+ K + G + + TP PE
Sbjct: 109 LQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEI 167
Query: 90 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 124
L + +SFG LL ++L G+ P H D
Sbjct: 168 LLGQKYNTSVDWWSFGVLLYEMLIGQ--SPFHGHD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 2e-05
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 5/128 (3%)
Query: 42 RALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNLAFTPPEYLRTGRVTPE 98
R +Y DL +L D+ GN R+S GL +K + K + + PE L+
Sbjct: 115 RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFS 174
Query: 99 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158
++ G L ++++G P + + L+ T + ++ D E L
Sbjct: 175 VDWFALGCTLYEMIAG-RSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEAL 232
Query: 159 LQYEPRER 166
LQ +P +R
Sbjct: 233 LQKDPEKR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 37/170 (21%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG----LMKNSRDGKSYS 79
L+ VL + LEY S G+ ++ D+ A IL EDG+ +++ FG L +
Sbjct: 108 LKEVL---KGLEYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVR 163
Query: 80 TNLAFTP----PEYLRTGRVTPESV-IYSFGTLLLDLLSGK----HIPPSHALDLIRDRN 130
TP PE + I+SFG ++L +G PP L
Sbjct: 164 KTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL------- 216
Query: 131 LQMLT----DSCLEGQFTDDD----GTELVRLASRCLQYEPRERPNPKSL 172
MLT LE T D ++ S CLQ +P +RP + L
Sbjct: 217 --MLTLQNDPPSLE---TGADYKKYSKSFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ +EY SK + ++ DL A + DE +++ FGL ++ D + YS +
Sbjct: 105 LQVAKGMEYLASK-KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAK 163
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-------LIRDRNLQ 132
+ + E L+T + T +S ++SFG LL +L++ + PP +D L++ R L
Sbjct: 164 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVDSFDITVYLLQGRRL- 221
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177
L+ ++ D L + C +P RP LV+ +
Sbjct: 222 ------LQPEYCPD---PLYEVMLSCWHPKPEMRPTFSELVSRIE 257
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 2e-05
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 22 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 81
M ++ + +A +EY +SK ++ DL A + +E+ N ++ FGL K +G Y
Sbjct: 113 MLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQG 171
Query: 82 LAFTPP------EYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRN 130
P E L T +S ++SFG + ++ + P S D +R N
Sbjct: 172 RIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN 231
Query: 131 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
CL+G L L S C P++RP+ ++L
Sbjct: 232 RLKQPPDCLDG---------LYSLMSSCWLLNPKDRPSFETL 264
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 3e-05
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M N +L L E + + + +A+ + + K ++ DL A IL E
Sbjct: 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLC 140
Query: 61 PRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++++
Sbjct: 141 CKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 198
Query: 114 GKHIP-PSHA-LDLIR--DRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167
IP P ++I+ +R +M D+C E EL L C + +P ERP
Sbjct: 199 YGRIPYPGMTNPEVIQNLERGYRMPRPDNCPE---------ELYELMRLCWKEKPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 3e-05
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 34 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY 89
L++ SKG +Y DL ++ D DG+ +++ FG+ K + G + ++ TP PE
Sbjct: 109 LQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEI 167
Query: 90 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 124
L+ + T +SFG LL ++L G+ P H D
Sbjct: 168 LQGLKYTFSVDWWSFGVLLYEMLIGQ--SPFHGDD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 3e-05
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + + +A +EY +S ++ DL A IL E + ++S GL + Y
Sbjct: 127 LHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ + PPE + G+ + +S I+SFG +L ++ S P ++++R R L
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL 245
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
++ C ++ L + C Q P RP K + T L
Sbjct: 246 PCSEDCPPRMYS---------LMTECWQEGPSRRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 4e-05
Identities = 36/184 (19%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
Query: 7 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66
+ +L + + + + +++ ++Y ++ + ++ DL A +L E ++S F
Sbjct: 113 SSYLDNPDERALTMGDLISFAWQISRGMQY-LAEMKLVHRDLAARNVLVAEGRKMKISDF 171
Query: 67 GLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH--- 116
GL ++ + SY + + E L T +S ++SFG LL ++++ G +
Sbjct: 172 GLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 231
Query: 117 -IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175
I P +L++ ++C E E+ L C + EP +RP +
Sbjct: 232 GIAPERLFNLLKTGYRMERPENCSE---------EMYNLMLTCWKQEPDKRPTFADISKE 282
Query: 176 LSPL 179
L +
Sbjct: 283 LEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 4e-05
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 28/156 (17%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF----- 84
L AL+Y S+ + L+ D+ I +G +L FG+ K S+ +
Sbjct: 112 LCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTVDLAKTVV 164
Query: 85 -TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
TP PE + +S I+S G +L +L + KH P NL L L
Sbjct: 165 GTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH--PFEG------ENLLELALKIL 216
Query: 140 EGQFTDDD---GTELVRLASRCLQYEPRERPNPKSL 172
+GQ+ +EL L S LQ +P ERP+ +
Sbjct: 217 KGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 4e-05
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 87
Q L Y +G ++ D+ A IL +DG +L+ FG+ D ++ TP P
Sbjct: 110 QGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAP 168
Query: 88 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----LQMLTDSCLEGQ 142
E + + S I+S G +++LL+G PP + D N +++ D
Sbjct: 169 EVIEMSGASTASDIWSLGCTVIELLTGN--PPYY------DLNPMAALFRIVQDDHPP-- 218
Query: 143 FTDDDGTELVRLASRCLQYEPRERPNPKSL 172
+ EL +C Q +P RP K L
Sbjct: 219 LPEGISPELKDFLMQCFQKDPNLRPTAKQL 248
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 5e-05
Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + + +A +EY +S ++ DL A L E ++S FGL SRD YS +
Sbjct: 127 LHIAIQIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTVKISDFGL---SRDI--YSADYY 180
Query: 82 ---------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIR 127
+ + PPE + G+ T ES I+SFG +L ++ S P +++IR
Sbjct: 181 RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIR 240
Query: 128 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
R L + C + L C P RP K + T L
Sbjct: 241 SRQLLPCPEDC---------PARVYALMIECWNEIPARRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 5e-05
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 12/151 (7%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTN 81
+ + + L Y S G H D+ IL D DG +L+ FG K + + +
Sbjct: 105 KYTRQILEGLAYLHSNGIV--HRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGS 162
Query: 82 LAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 137
+ TP PE +R + I+S G ++++ +GK P S + + L + S
Sbjct: 163 VRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP-PWSELGNPM--AALYKIGSS 219
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+ + E +CL+ +P++RP
Sbjct: 220 GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 5e-05
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN--- 81
+A+ +EY S+ R ++ DL A +L ED +++ FGL + D Y ++N
Sbjct: 140 AYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRL 198
Query: 82 -LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKH---IPPSHALDLIRDRNLQMLT 135
+ + PE L T +S ++SFG L+ ++ L G IP L+R+ +
Sbjct: 199 PVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKP 258
Query: 136 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+C EL L C P +RP K LV AL
Sbjct: 259 SNCTH---------ELYMLMRECWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 6e-05
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V L + +AL ++G ++ D+ + IL DG +LS FG +L T
Sbjct: 121 VCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 179
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD 128
P PE + PE I+S G ++++++ G+ + PP A+ +IRD
Sbjct: 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 230
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 6e-05
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 25 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 81
R + AQ LE+ + R +Y DL +L D DGN R+S GL +DG+S +
Sbjct: 98 RACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156
Query: 82 LAFTP----PEYLRTGRVTPESVIY-SFGTLLLDLLSGK 115
A TP PE L+ G SV Y + G L ++++ +
Sbjct: 157 YAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 6e-05
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 22 MRLRVVLHLAQA----LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRD 74
+ + ++ +A A L Y + R ++ D+ IL + G +L FG+ + NS
Sbjct: 100 IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK------------HIPPSHA 122
T+ + PE ++ G+ T +S ++S G +++L GK P
Sbjct: 160 DTFVGTS-TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGI 218
Query: 123 LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
LDL++ + +Q F +D L CL +P ERP P+ L
Sbjct: 219 LDLLQ-QIVQEPPPRLPSSDFPED----LRDFVDACLLKDPTERPTPQQLC 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 6e-05
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E+ ++ FGL ++ Y
Sbjct: 181 FQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P ++ + Q L D
Sbjct: 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN---EEFCQRLKDGT-R 295
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
+ ++ E+ R+ C Q +P+ERP +LV L L +E
Sbjct: 296 MRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 7e-05
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 73
E P+ ++ + + L+Y S+ + ++ D+ A +L E G +L+ FG+
Sbjct: 94 EPGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 152
Query: 74 DGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDL 125
D + TP PE ++ ++ I+S G ++L G+ + P L L
Sbjct: 153 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL 212
Query: 126 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
I N LEG ++ L CL EP RP K L+
Sbjct: 213 IPKNN-----PPTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 8e-05
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 22/187 (11%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 82
+A+ +EY S+ + ++ DL A +L ED +++ FGL ++ + Y +TN +
Sbjct: 142 QVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPV 200
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPSHALDLIRDRNLQMLTDS 137
+ PE L T +S ++SFG LL ++ + IP L+++ + +
Sbjct: 201 KWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 260
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSA 197
C EL + C P +RP K LV L + T ++ + +P
Sbjct: 261 CTH---------ELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTSTDEYLDLSVPFE- 310
Query: 198 SVSPLSP 204
SP P
Sbjct: 311 QYSPGCP 317
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 9e-05
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTN 81
+A+ + + + ++ DL A IL +++ FGL + +R+G +
Sbjct: 110 QIAEGMAF-IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-- 166
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM-LTD 136
+ +T PE + G T +S ++SFG LL+++++ IP P + ++IR +R +M +
Sbjct: 167 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 226
Query: 137 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+C E EL + RC + P ERP + + + L
Sbjct: 227 NCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 1e-04
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--- 80
L+ + + + ++Y S+ + ++ DL A +L + + ++ FGL K K Y T
Sbjct: 112 LKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKD 170
Query: 81 ----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLIRDRNLQM 133
+ + PE L + S ++SFG L +LL+ + P + L +I + QM
Sbjct: 171 DLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQM 230
Query: 134 ----LTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
L EG+ + E+ +L +C +++P +R ++L+
Sbjct: 231 TVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 1e-04
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 16/179 (8%)
Query: 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 61
N L K L P+ R + + L + SK + L+ D+ + + D N
Sbjct: 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLDAYDNV 140
Query: 62 RLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 117
++ G+ K D +++ + TP PE +S +++ G +L + +GKH
Sbjct: 141 KIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKH- 199
Query: 118 PPSHALDLIRDRNLQMLTDSCLEGQFTDDDG---TELVRLASRCLQYEPRERPNPKSLV 173
P A N L + G F +L +L +CL + R+RP+ L+
Sbjct: 200 -PFDA------NNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 33 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLAFTP----P 87
AL + KG +Y DL +L D +G+ +L+ FG+ K +GK+ ST TP P
Sbjct: 108 ALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST-FCGTPDYIAP 165
Query: 88 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
E L+ P ++ G LL ++L G H P
Sbjct: 166 EILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 21 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 80
L + + +A+EY S G ++ DL A L ED ++S FGL + D + S+
Sbjct: 100 EWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS 158
Query: 81 N-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 135
+ + PPE R + +S ++SFG L+ ++ S +P R N +++
Sbjct: 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYE------RFSNSEVV- 211
Query: 136 DSCLEGQFTDDD---GTELVRLASRCLQYEPRERPNPKSLVTAL 176
+S G TE+ + C +P +RP K L++ L
Sbjct: 212 ESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 3e-04
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 11/100 (11%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK------ 76
V + + L Y ++G ++ D+ IL D G ++S FG+ K NS K
Sbjct: 112 VRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARP 170
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH 116
S ++ + PE ++ T ++ I+S G L++++L+GKH
Sbjct: 171 SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH 210
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 3e-04
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 33 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE 88
L++ KG +Y DL +L D+DG+ +++ FG+ K + +G+ ++ TP PE
Sbjct: 108 GLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPE 166
Query: 89 YLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALD 124
L+ G+ ESV +SFG LL ++L G+ P H D
Sbjct: 167 ILK-GQKYNESVDWWSFGVLLYEMLIGQ--SPFHGED 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 3e-04
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNL 82
+V + + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDSCLEG 141
++ PE L+ + +S I+S G L+++ G++ IPP A + L+++ +EG
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA------KELELMFGCPVEG 220
Query: 142 QFTDDDGTELVRLASRCL-QYEPRERP 167
+ + + R R L Y P RP
Sbjct: 221 DPAESETSPRPRPPGRPLSSYGPDSRP 247
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 33 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT 92
ALEY SK +Y DL IL D++G+ +L+ FG K RD ++++ L T PEYL
Sbjct: 113 ALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT-PEYL-- 165
Query: 93 GRVTPESV----------IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142
PE + ++ G L+ ++L G PP D N + + L G+
Sbjct: 166 ---APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP------FFDDNPFGIYEKILAGK 214
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP---PSH--ALDLIRDRNLQMLTDSCLE 140
PE L+ G T +S ++SFG +L ++ + P S+ L + D L ++C +
Sbjct: 189 APESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPD 248
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 178
+L+ L C QY P+ RP +V++L
Sbjct: 249 ---------KLLELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 4e-04
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 6 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLST 65
L HL+ E H + +R+ + + AL+ + +Y D+ IL D +G+ L+
Sbjct: 92 LFTHLYQRE-HFTESEVRV-YIAEIVLALD-HLHQLGIIYRDIKLENILLDSEGHVVLTD 148
Query: 66 FGLMK-----NSRDGKSYSTNLAFTPPEYLRTGRVTPESVI--YSFGTLLLDLLSG 114
FGL K S+ + + PE +R G + + +S G L +LL+G
Sbjct: 149 FGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 5e-04
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTN 81
R+ + + + L Y S + L+ D+ +L + G +L FG+ + NS K+Y
Sbjct: 99 RIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-AKTYVGT 156
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-----------HIPPSHALDLIRDRN 130
A+ PE + + S ++S G ++L G+ + P L I D +
Sbjct: 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED 216
Query: 131 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
+L GQF++ + V ++C++ +P+ERP P++L+
Sbjct: 217 PPVLPV----GQFSE----KFVHFITQCMRKQPKERPAPENLM 251
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 5e-04
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 23/136 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 181
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151
+S ++SFG LL +L++ +P L+ + +R +M C +G + EL
Sbjct: 182 IKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQV-ERGYRM---PCPQG--CPESLHEL 235
Query: 152 VRLASRCLQYEPRERP 167
++L C + +P ERP
Sbjct: 236 MKL---CWKKDPDERP 248
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 5e-04
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTNLAFT-- 85
L + L+Y S G L+ D+ IL + DG +L+ FGL + R+ Y TN T
Sbjct: 109 LLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLW 166
Query: 86 --PPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPP----SHALDLI 126
PPE L G R PE ++S G +L +L GK I L+ I
Sbjct: 167 YRPPELL-LGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKI 214
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 5e-04
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 82
+A+ +EY SK + ++ DL A +L ED +++ FGL ++ Y +TN +
Sbjct: 148 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 206
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKHIPPSHALDLIRDRNLQMLTDSCLE 140
+ PE L T +S ++SFG LL ++ L G P +L + +L E
Sbjct: 207 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-----LLK----E 257
Query: 141 GQFTDDDGT---ELVRLASRCLQYEPRERPNPKSLVTAL 176
G D EL + C P +RP K LV L
Sbjct: 258 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 5e-04
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 86
+A AL Y S +Y DL IL D G+ L+ FGL K + ++ TP
Sbjct: 105 IASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYL 163
Query: 87 -PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 124
PE LR + G +L ++L G +PP ++ D
Sbjct: 164 APEVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 8e-04
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 9/166 (5%)
Query: 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 76
P+ ++ + +A +++ S R ++ DL A L ++S L K+ + +
Sbjct: 113 PLSTKQKVALCTQIALGMDH-LSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE 171
Query: 77 SYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 131
Y L + PE ++ + +S ++SFG L+ ++ + +P L + L
Sbjct: 172 YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY---GLSDEEVL 228
Query: 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177
L LE + + L +L +RC P++RP+ LV+AL
Sbjct: 229 NRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 8e-04
Identities = 42/194 (21%), Positives = 73/194 (37%), Gaps = 25/194 (12%)
Query: 1 MPNETLAKHLFH--WETHPMKWA--MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 56
M + L L + P K L+ ++ +A +EY +++ ++ DL A +
Sbjct: 89 MKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR-NFIHRDLAARNCMLR 147
Query: 57 EDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVTPESVIYSFGTLLLD 110
ED ++ FGL K G Y P E L T +S +++FG + +
Sbjct: 148 EDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWE 207
Query: 111 LLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 165
+ + P D +R N + CL+ EL L C + +P++
Sbjct: 208 IATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLD---------ELYDLMYSCWRADPKD 258
Query: 166 RPNPKSLVTALSPL 179
RP L L +
Sbjct: 259 RPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 8e-04
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FT 85
+ L Y SKG L+ DL A +L D DG ++S FG+ K S D N++ +
Sbjct: 119 EGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177
Query: 86 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGK 115
PE + + + + I+S G ++L++ +G+
Sbjct: 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNLAFTPPEY 89
+ L Y K + ++ D+ IL + G +L FG+ + K++ ++ PE
Sbjct: 111 KGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPER 170
Query: 90 LRTGRVTPESVIYSFGTLLLDLLSGK------HIPPSHALDLIRDRNLQMLTDSCLEGQF 143
++ + +S I+S G L++L +G+ + PP +L+ + G+F
Sbjct: 171 IQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELL-QYIVNEPPPRLPSGKF 229
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSL 172
+ D + CL +PRERP+ K L
Sbjct: 230 SPD----FQDFVNLCLIKDPRERPSYKEL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 23/150 (15%)
Query: 34 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS---RDGKSYSTNLAFTPPEYL 90
LEY + ++ D+ IL D +G +L+ FG+ K KS+ + + PE +
Sbjct: 115 LEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVI 173
Query: 91 -RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-------RDRNLQMLTDSCLEGQ 142
+ G + I+S G +L++ +GK PP L+ + R + L + D
Sbjct: 174 AQQGGYGLAADIWSLGCTVLEMATGK--PPWSQLEGVAAVFKIGRSKELPPIPDH----- 226
Query: 143 FTDDDGTELVRLASRCLQYEPRERPNPKSL 172
D+ + + CLQ +P RP L
Sbjct: 227 -LSDEAKDFILK---CLQRDPSLRPTAAEL 252
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.001
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 24/179 (13%)
Query: 12 HWETHPMKWAMRLRVVLHLAQALEYCTSK--------GRALY---HDLNAYRILFDEDGN 60
H E + + +L V LA AL Y K G+ + + LN + F + +
Sbjct: 92 HREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV--IYSFGTLLLDLLSGKHIP 118
P + L + R + + PE +R G+ + +SFGT LL++ S P
Sbjct: 152 PGIPITVLSREERVERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEP 206
Query: 119 PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177
S L + D + D EL L ++C Y+P +RP+ ++++ L+
Sbjct: 207 LS---TLSSSEKERFYQDQH---RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.001
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-----NLAF 84
+ + + Y SK + ++ DL A L D+ G ++S FGL + D + S+ + +
Sbjct: 109 VCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 167
Query: 85 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+PPE L + + +S +++FG L+ ++ S +P
Sbjct: 168 SPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.001
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 83
LR VL LEY +G+ ++ D+ A IL E+G+ +L+ FG+ S
Sbjct: 104 LREVLL---GLEYLHEEGK-IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFV 159
Query: 84 FTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLT 135
TP PE ++ ++ I+S G ++L G+ + P L LI N L
Sbjct: 160 GTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLE 219
Query: 136 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
+ +F+ + V L CL +P+ERP+ K L
Sbjct: 220 GN----KFSKP-FKDFVSL---CLNKDPKERPSAKEL 248
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.001
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 25/137 (18%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 181
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS-CLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 182 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------S 231
Query: 151 LVRLASRCLQYEPRERP 167
L L +C + EP ERP
Sbjct: 232 LHDLMCQCWRKEPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.001
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLA 83
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 128 IADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 186
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSC 138
+ PE L+ G T S ++SFG +L ++ + P L + + L D+C
Sbjct: 187 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNC 246
Query: 139 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+ F EL+R+ C QY P+ RP+ +++++
Sbjct: 247 PDMLF------ELMRM---CWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 39.7 bits (92), Expect = 0.001
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 87
+ L+Y S+ + ++ D+ A +L E G+ +L+ FG+ D + TP P
Sbjct: 112 KGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170
Query: 88 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-NLQMLTDSCLEGQFTDD 146
E ++ ++ I+S G ++L G+ PP+ + +R + L G+F+
Sbjct: 171 EVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDMHPMRVLFLIPKNNPPTLTGEFSKP 228
Query: 147 DGTELVRLASRCLQYEPRERPNPKSLV 173
CL +P RP K L+
Sbjct: 229 ----FKEFIDACLNKDPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.002
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V L + +AL Y ++G ++ D+ + IL DG +LS FG +L T
Sbjct: 123 VCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGT 181
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD 128
P PE + E I+S G ++++++ G+ + PP A+ IRD
Sbjct: 182 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD 232
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.002
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNL 82
+V + + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDL 125
++ PE L+ + +S I+S G L++L G++ IPP A +L
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.002
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 42 RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPE 98
R +Y DL IL D+ G+ R+S GL + +G K + + PE ++ R T
Sbjct: 122 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 181
Query: 99 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158
++ G LL ++++G+ P I+ ++ L E ++++ + L
Sbjct: 182 PDWWALGCLLYEMIAGQS-PFQQRKKKIKREEVERLVKEVQE-EYSEKFSPDARSLCKML 239
Query: 159 LQYEPRER 166
L +P+ER
Sbjct: 240 LCKDPKER 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.002
Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 28/162 (17%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V L + +AL + ++G ++ D+ + IL DG +LS FG +L T
Sbjct: 120 VCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGT 178
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD------RNL 131
P PE + E I+S G ++++++ G+ + PP A+ IRD +NL
Sbjct: 179 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNL 238
Query: 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
++ L R L +P +R L+
Sbjct: 239 HKVS-------------PRLRSFLDRMLVRDPAQRATAAELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.002
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 87
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 88 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 147
E + P+ I+S G + ++++ G+ PP + +R L + T+ E Q +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKL 242
Query: 148 GTELVRLASRCLQYEPRERPNPKSLV 173
+RCL + +R + K L+
Sbjct: 243 SAIFRDFLNRCLDMDVEKRGSAKELL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.002
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 25 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST- 80
+++L+ +Q +EY SK R ++ DL IL + + ++ FGL K K Y
Sbjct: 109 KLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKV 167
Query: 81 ------NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI---PPSHALDLI-RDRN 130
+ + PE L + + S ++SFG +L +L + PP+ + ++ D+
Sbjct: 168 REPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQ 227
Query: 131 LQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNPKSL 172
QM+ +E G+ G E+ + C +P +RP+ L
Sbjct: 228 GQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSEL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.002
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 34/173 (19%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP 87
+A+ +E+ S+ + ++ DL A IL E+ ++ FGL +RD + P
Sbjct: 180 FQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGL---ARD--------IYKDP 227
Query: 88 EYLRTGR-------VTPESV----------IYSFGTLLLDLLS-GKHIPPSHALDLIRDR 129
+Y+R G + PES+ ++SFG LL ++ S G P +D R
Sbjct: 228 DYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCR 287
Query: 130 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
L+ T T E+ + C P +RP LV L L +E
Sbjct: 288 RLKEGTRMRAPEYATP----EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 38.9 bits (90), Expect = 0.003
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK--NSRD 74
M + + +A+ +EY S+ + ++ DL A +L E+ +++ FGL + N+ D
Sbjct: 133 QMTFKDLVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDVNNID 191
Query: 75 GKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDL 125
+TN + + PE L T +S ++SFG L+ ++ L G IP L
Sbjct: 192 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 251
Query: 126 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+++ + +C EL + C P RP K LV L
Sbjct: 252 LKEGHRMDKPANCT---------NELYMMMRDCWHAIPSHRPTFKQLVEDL 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.003
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 23/165 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 83
+R ++ +A +EY +SK ++ DL A + +E+ ++ FGL K G Y A
Sbjct: 116 VRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCA 174
Query: 84 FTPP------EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD------LIRDRNL 131
P E L T S +++FG + ++++ P + + LI+ L
Sbjct: 175 SKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL 234
Query: 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+ D CLE ++ L +C EP+ RP+ + L L
Sbjct: 235 KQPPD-CLE---------DVYELMCQCWSPEPKCRPSFQHLRDQL 269
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.003
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAF 84
V + +AL + S + ++ DL A IL DG+ +L+ FG+ KN + T +
Sbjct: 108 VCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIG- 165
Query: 85 TP----PEYL--RTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 127
TP PE + T + P ++ I+S G L++L + PP H L+ +R
Sbjct: 166 TPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME--PPHHELNPMR 215
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.003
Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 21/158 (13%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLA 83
+A + Y +K + ++ DL A + D ++ FG+ ++ R G +
Sbjct: 128 IADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 186
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSC 138
+ PE L+ G T S ++SFG +L ++ S P L + D D+C
Sbjct: 187 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 246
Query: 139 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
E + L C Q+ P+ RP +V L
Sbjct: 247 PE---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.003
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTNLAF--T 85
+A+ + Y + +++ DL A IL ED +++ FGL + ++ S + + T
Sbjct: 113 VAEGMAYLEEQ-NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWT 171
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCL 139
PE G + +S ++SFG LL ++ + +P D I +M C
Sbjct: 172 APEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI-TAGYRMPCPAKCP 230
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177
+ E+ ++ C EP +RP+ K+L L
Sbjct: 231 Q---------EIYKIMLECWAAEPEDRPSFKALREELD 259
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 76
P WA + + + +E +G ++ D+ +L D+ G+ +L+ FGL +N + K
Sbjct: 95 PEDWAKQY--IAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENK 151
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ + PE + S +S G ++ + L G PP HA
Sbjct: 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFG--YPPFHA 195
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.004
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
++ + AL+Y G ++ D+ A IL GN +L FG+ S + T
Sbjct: 106 IIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGT 164
Query: 86 P----PEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 140
P PE + G+ I+S G + ++ +G PP +D R ML
Sbjct: 165 PYWMAPEVITEGKYYDTKADIWSLGITIYEMATGN--PPYSDVDAFR---AMMLIPKSKP 219
Query: 141 GQFTDDDGTELVR-LASRCLQYEPRER 166
+ D+ ++L+R + CL EP+ER
Sbjct: 220 PRLEDNGYSKLLREFVAACLDEEPKER 246
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.004
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTN----LA 83
L + L YC K L+ D+ IL + G +L+ FGL + NS + + Y TN L
Sbjct: 125 LLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPY-TNKVITLW 182
Query: 84 FTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHI 117
+ PPE L R P ++S G +L +L + K I
Sbjct: 183 YRPPELLLGEERYGPAIDVWSCGCILGELFTKKPI 217
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.004
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 33 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTP----P 87
L++ +G +Y DL +L D +G+ +++ FG+ K G + ST TP P
Sbjct: 108 GLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST-FCGTPDYIAP 165
Query: 88 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 124
E L P ++ G LL ++L+G+ P D
Sbjct: 166 EILSYQPYGPAVDWWALGVLLYEMLAGQ--SPFEGDD 200
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|223533 COG0457, NrfG, FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.3 bits (87), Expect = 0.004
Identities = 22/136 (16%), Positives = 46/136 (33%)
Query: 219 EILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG 278
L ++ ++ E + ++ + + G + ++A+E + +
Sbjct: 138 GALYELGDYEEALELYEKALELDPELNELAEALLALGALLEALGRYEEALELLEKALKLN 197
Query: 279 TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQV 338
L YL ++AL +A + P A Y A L +G EA
Sbjct: 198 PDDDAEALLNLGLLYLKLGKYEEALEYYEKALELDPDNAEALYNLALLLLELGRYEEALE 257
Query: 339 ALKEGTTLEAKKNSTA 354
AL++ L+ +
Sbjct: 258 ALEKALELDPDLYNLG 273
|
Length = 291 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 357 | |||
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.98 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.98 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.97 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.97 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.97 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.97 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.97 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.97 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.97 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.97 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.97 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.97 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.97 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.97 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.96 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.96 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.96 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.96 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.96 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.96 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.96 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.96 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.96 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.96 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.96 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.96 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.96 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.96 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.96 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.96 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.96 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.96 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.96 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.96 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.96 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.96 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.96 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.96 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.96 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.96 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.96 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.96 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.96 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.96 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.96 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.96 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.96 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.96 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.96 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.96 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.96 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.96 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.96 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.96 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.96 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.96 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.96 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.96 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.96 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.96 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.96 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.96 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.96 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.96 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.96 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.96 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.96 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.96 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.96 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.96 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.96 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.96 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.96 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.96 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.96 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.96 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.96 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.95 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.95 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.95 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.95 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.95 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.95 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.95 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.95 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.95 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.95 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.95 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.95 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.95 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.95 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.95 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.95 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.95 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.95 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.95 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.95 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.95 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.95 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.95 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.95 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.95 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.95 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.95 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.95 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.95 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.95 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.95 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.95 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.95 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.95 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.95 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.95 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.95 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.95 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.95 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.95 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.95 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.95 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.95 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.95 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.95 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.95 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.95 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.95 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.94 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.94 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.94 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.94 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.94 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.94 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.94 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.94 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.94 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.94 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.94 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.94 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.94 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.94 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.94 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.94 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.94 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.94 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.94 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.94 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.94 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.94 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.94 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.94 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.94 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.94 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.94 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.94 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.94 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.94 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.94 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.94 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.94 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.94 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.94 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.94 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.94 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.94 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.94 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.94 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.94 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.94 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.94 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.94 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.94 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.94 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.94 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.94 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.94 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.93 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.93 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.93 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.93 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.93 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.93 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.93 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.93 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.93 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.93 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.93 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.93 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.93 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.93 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.93 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.93 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.93 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.93 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.93 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.93 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.93 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.93 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.93 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.93 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.93 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.93 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.93 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.93 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.93 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.92 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.92 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.92 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.92 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.92 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.92 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.92 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.92 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.92 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.92 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.92 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.92 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.92 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.92 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.92 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.92 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.92 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.92 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.91 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.91 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.91 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.91 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.91 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.91 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.91 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.91 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.91 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.91 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.91 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.91 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.9 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.9 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.9 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.9 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.89 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.89 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.89 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.88 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.88 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.88 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.88 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.88 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.88 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.88 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.87 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.87 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.86 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.86 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.85 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.84 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.83 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.81 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.81 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.79 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.78 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.78 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.77 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.75 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.75 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.74 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.72 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.72 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.71 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.7 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.7 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.7 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.68 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.67 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.67 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.67 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.66 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.65 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.64 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.63 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.63 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.62 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.61 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.6 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.6 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.58 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.57 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.55 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.55 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.53 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.53 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.51 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.5 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.49 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.48 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.46 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.44 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.43 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.42 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.42 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.42 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.41 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.39 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.39 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.39 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.38 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.38 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.38 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.37 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.37 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.36 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.36 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.34 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.32 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.29 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.29 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.29 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.28 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.27 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.27 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.26 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.26 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.25 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.25 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.24 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.23 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.23 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 99.23 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 99.22 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.21 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.21 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.2 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.2 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.2 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.2 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.19 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.17 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.16 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 99.16 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.16 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.15 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.15 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.14 | |
| KOG4162 | 799 | consensus Predicted calmodulin-binding protein [Si | 99.14 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.14 | |
| PRK10049 | 765 | pgaA outer membrane protein PgaA; Provisional | 99.13 | |
| COG4235 | 287 | Cytochrome c biogenesis factor [Posttranslational | 99.11 | |
| PF13512 | 142 | TPR_18: Tetratricopeptide repeat | 99.08 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.06 | |
| KOG2076 | 895 | consensus RNA polymerase III transcription factor | 99.06 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.06 | |
| PF13429 | 280 | TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 | 99.05 | |
| PRK11447 | 1157 | cellulose synthase subunit BcsC; Provisional | 99.05 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.04 | |
| PLN03098 | 453 | LPA1 LOW PSII ACCUMULATION1; Provisional | 99.02 | |
| COG4785 | 297 | NlpI Lipoprotein NlpI, contains TPR repeats [Gener | 99.02 | |
| PRK11447 | 1157 | cellulose synthase subunit BcsC; Provisional | 99.0 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 98.99 |
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=272.06 Aligned_cols=169 Identities=21% Similarity=0.325 Sum_probs=140.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~ 77 (357)
|+||||++.+. ..+.+++...-+|+.+|++||.|||. .+ ||||||||+|||++..|.|||||||+++..... .+
T Consensus 160 MDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~t 236 (364)
T KOG0581|consen 160 MDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANT 236 (364)
T ss_pred cCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhccc
Confidence 78999999996 45889999999999999999999996 55 999999999999999999999999998876544 57
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh--HHhhhccccccccccccCCCCch-hHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNLQMLTDSCLEGQFTDD-DGTELVRL 154 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l 154 (357)
++||..|||||.+.++.++.++||||||++++|+.+|+.|++.... ..+-. .+..+.+. .++..|.. ++++++.+
T Consensus 237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~-Ll~~Iv~~-ppP~lP~~~fS~ef~~F 314 (364)
T KOG0581|consen 237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFE-LLCAIVDE-PPPRLPEGEFSPEFRSF 314 (364)
T ss_pred ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHH-HHHHHhcC-CCCCCCcccCCHHHHHH
Confidence 8999999999999999999999999999999999999988776411 01111 11111111 12334444 78899999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
|..||+.||.+|||+.+++.
T Consensus 315 V~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 315 VSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHHHhcCCcccCCCHHHHhc
Confidence 99999999999999999886
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=277.18 Aligned_cols=179 Identities=27% Similarity=0.414 Sum_probs=151.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-CeEEecCCCccccCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-~~kl~dfg~~~~~~~~---- 75 (357)
|+||||.++|+......+++..+++|+.||++|+.|||++++||||||||.|||++.++ ++||+|||+++.....
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~ 201 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSM 201 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccc
Confidence 79999999997544789999999999999999999999998789999999999999997 9999999999765532
Q ss_pred CCccCCCCCCchhhhc--CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLR--TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~--~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
+...||..|||||+++ ...++.|+||||||+++|||+||+.||............... ..+...|..+++.+..
T Consensus 202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~----~~Rp~~p~~~~~~l~~ 277 (362)
T KOG0192|consen 202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG----GLRPPIPKECPPHLSS 277 (362)
T ss_pred cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc----CCCCCCCccCCHHHHH
Confidence 2357999999999999 558999999999999999999999998776543333222222 2344455557789999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
+|.+||+.||+.||++.+|+..|+.+....
T Consensus 278 l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 278 LMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred HHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999887653
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=265.08 Aligned_cols=182 Identities=34% Similarity=0.610 Sum_probs=152.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CceecCCCCCCeeeCCCCCeEEecCCCccccCC-CCC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-GKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~-~~~ 77 (357)
|+||||+++|+.....+++|.++++|+.++++||+|||+.. +||||||||+|||||.++.+||+|||+++..+. ...
T Consensus 154 m~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~ 233 (361)
T KOG1187|consen 154 MPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTS 233 (361)
T ss_pred cCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccc
Confidence 78999999998643339999999999999999999999976 599999999999999999999999999977654 332
Q ss_pred ---c-cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcc-----------hhHHhhhcccccccccccc-C
Q 018348 78 ---Y-STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-----------ALDLIRDRNLQMLTDSCLE-G 141 (357)
Q Consensus 78 ---~-~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~ 141 (357)
. .||.+|++||++..+..+.|+|||||||+++||+||+.+.... ....+.......+.++.+. .
T Consensus 234 ~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~ 313 (361)
T KOG1187|consen 234 VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEG 313 (361)
T ss_pred eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCC
Confidence 1 7999999999999899999999999999999999999765421 1233444456677787766 5
Q ss_pred CCCc-hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 142 QFTD-DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 142 ~~~~-~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.++. .....+..+..+|++.+|..||+|.+|+..|+.+...
T Consensus 314 ~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 314 EYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred CCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 5554 5677789999999999999999999999999665443
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=260.20 Aligned_cols=176 Identities=26% Similarity=0.362 Sum_probs=147.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCc--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-- 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 78 (357)
|++|||.++|....++.++..+.+.++.|||+|++||++++ +|||||-++||||+++..+||+|||+++...++...
T Consensus 283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~ 361 (468)
T KOG0197|consen 283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS 361 (468)
T ss_pred cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeec
Confidence 78999999998766788999999999999999999999999 999999999999999999999999999965544321
Q ss_pred cC---CCCCCchhhhcCCCCCCcccchhHHHHHHHHHcC-CCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 79 ST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 79 ~g---t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
.| ...|+|||.+..++++.|||||||||++|||+|- +.|++....... ...+....+...|..|+..+.+|
T Consensus 362 ~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev-----~~~le~GyRlp~P~~CP~~vY~l 436 (468)
T KOG0197|consen 362 EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV-----LELLERGYRLPRPEGCPDEVYEL 436 (468)
T ss_pred CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH-----HHHHhccCcCCCCCCCCHHHHHH
Confidence 12 3579999999999999999999999999999984 445454333222 22233344556788899999999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
|+.||..+|++|||+..+...|+.+...
T Consensus 437 M~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 437 MKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred HHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 9999999999999999999999887654
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=236.58 Aligned_cols=170 Identities=21% Similarity=0.302 Sum_probs=139.6
Q ss_pred CCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC
Q 018348 2 PNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 76 (357)
Q Consensus 2 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~---~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~ 76 (357)
.+|+|..+|.+. +.+.+++.++++++.|++.||..+|.+ +.|+||||||.||+|+.+|.|||+|||+++.+....
T Consensus 103 ~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~ 182 (375)
T KOG0591|consen 103 DAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT 182 (375)
T ss_pred cccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh
Confidence 579999999654 356899999999999999999999993 249999999999999999999999999999887654
Q ss_pred ----CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCC-chhHHHH
Q 018348 77 ----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-DDDGTEL 151 (357)
Q Consensus 77 ----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 151 (357)
+.+||+.||+||.+...+++.||||||+||++|||+.-+.||.+.....+-....+. --++.| .-.+.++
T Consensus 183 tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-----d~~~~p~~~YS~~l 257 (375)
T KOG0591|consen 183 TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-----DYPPLPDEHYSTDL 257 (375)
T ss_pred HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-----CCCCCcHHHhhhHH
Confidence 568999999999999999999999999999999999999999877443332222111 111233 3457889
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHHh
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTAL 176 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~L 176 (357)
..||..|+..||..||+...++..+
T Consensus 258 ~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 258 RELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred HHHHHHHccCCcccCCCcchHHHHH
Confidence 9999999999999999864444433
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=248.85 Aligned_cols=170 Identities=23% Similarity=0.396 Sum_probs=135.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-CCCeEEecCCCccccCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRD----- 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-~~~~kl~dfg~~~~~~~----- 74 (357)
+++|||.+++....+ .|++..+..+..||++||.|||+++ ++||||||+|||++. ++.+||+|||+++....
T Consensus 98 ~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~ 175 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKS 175 (313)
T ss_pred cCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCccccccccccccc
Confidence 589999999975433 8999999999999999999999999 999999999999998 79999999998876552
Q ss_pred --CCCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 75 --GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 75 --~~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
.....||+.|||||++..+ ...+++|||||||++.||+||+.|+... ... ........... ..+.+|...+.+.
T Consensus 176 ~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~-~~~~~~ig~~~-~~P~ip~~ls~~a 252 (313)
T KOG0198|consen 176 DSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEE-AEALLLIGRED-SLPEIPDSLSDEA 252 (313)
T ss_pred cccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cch-HHHHHHHhccC-CCCCCCcccCHHH
Confidence 1246799999999999963 3345999999999999999998776542 000 00000111111 1125566677899
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
.+++.+|+..||++|||+.+++..
T Consensus 253 ~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 253 KDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred HHHHHHHhhcCcccCcCHHHHhhC
Confidence 999999999999999999999874
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=254.65 Aligned_cols=165 Identities=20% Similarity=0.286 Sum_probs=142.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
.++|||..++. ..+++++.++..+++||+.||.|||+.+ |+|||||..|+|++++.+|||+|||++...... .
T Consensus 100 C~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~ 176 (592)
T KOG0575|consen 100 CHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKK 176 (592)
T ss_pred cCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCcccccc
Confidence 36899999995 5789999999999999999999999999 999999999999999999999999999887643 3
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
+.+||+.|.|||++.....+..+||||+|||+|-|+.|++||............... ....|...+.+..+||.
T Consensus 177 TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~------~Y~~P~~ls~~A~dLI~ 250 (592)
T KOG0575|consen 177 TLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN------EYSMPSHLSAEAKDLIR 250 (592)
T ss_pred eecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc------CcccccccCHHHHHHHH
Confidence 678999999999999888999999999999999999999998776544433332211 12234456678899999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
++|+.||.+|||+++|+.
T Consensus 251 ~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 251 KLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHhcCCcccCCCHHHHhc
Confidence 999999999999999986
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=247.71 Aligned_cols=172 Identities=21% Similarity=0.300 Sum_probs=147.4
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---Cc
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SY 78 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~~ 78 (357)
+.|-|.+.|. .+.+++......|..+|+.|+.|||.+. |||||||+-||||..+..|||+|||.++....-. ++
T Consensus 195 a~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSF 271 (904)
T KOG4721|consen 195 AQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSF 271 (904)
T ss_pred ccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhh
Confidence 5688999996 5778999999999999999999999998 9999999999999999999999999887655432 56
Q ss_pred cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 79 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
.||..|||||+++..+.+.|.||||||||||||+||..|+..-....+- -.+-...+....|..|+..+.-|+++|
T Consensus 272 aGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII----wGVGsNsL~LpvPstcP~GfklL~Kqc 347 (904)
T KOG4721|consen 272 AGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII----WGVGSNSLHLPVPSTCPDGFKLLLKQC 347 (904)
T ss_pred hhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE----EeccCCcccccCcccCchHHHHHHHHH
Confidence 7999999999999999999999999999999999999988654333222 223334455567778889999999999
Q ss_pred hhcCCCCCCChhhHHHHhcccc
Q 018348 159 LQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~~L~~~~ 180 (357)
|+..|..||||++|+..|+-..
T Consensus 348 w~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 348 WNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred HhcCCCCCccHHHHHHHHhhcC
Confidence 9999999999999999886553
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-33 Score=245.74 Aligned_cols=169 Identities=21% Similarity=0.301 Sum_probs=139.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC---CCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~---~~~kl~dfg~~~~~~~~-- 75 (357)
|+||.|.+.+. .++.+.+.....++.|++.|+.|||++| |+||||||+|||+..+ ..+||+|||+++.....
T Consensus 258 v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sf 334 (475)
T KOG0615|consen 258 VEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSF 334 (475)
T ss_pred ecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEecccchhhcccccee
Confidence 68999999997 5778999999999999999999999999 9999999999999755 78999999999988654
Q ss_pred -CCccCCCCCCchhhhcCCC---CCCcccchhHHHHHHHHHcCCCCCCcchhHH-hhhccccccccccccCCCCchhHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~---~~~~~Di~slG~vl~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
.+.+||+.|.|||++.+.. +..+.|+||+|||+|-+++|.+||..+.... ..+.....-.. ..+..+..++++
T Consensus 335 m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~--f~p~~w~~Isee 412 (475)
T KOG0615|consen 335 MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYA--FGPLQWDRISEE 412 (475)
T ss_pred hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccc--ccChhhhhhhHH
Confidence 4678999999999998753 2348899999999999999999998765443 33222222111 122345567889
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHH
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..++|.+||..||++|||+.|++.
T Consensus 413 a~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 413 ALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred HHHHHHHhhEeCcccCcCHHHHhc
Confidence 999999999999999999999886
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-32 Score=236.99 Aligned_cols=160 Identities=25% Similarity=0.322 Sum_probs=135.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
|+||.|.-.|. +.+.+++..+.-++.+|+.||.|||+++ ||||||||+|||+|.+|.++|+|||+++..... .
T Consensus 107 ~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~ 183 (357)
T KOG0598|consen 107 LNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATR 183 (357)
T ss_pred cCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCCCccc
Confidence 57999999996 5789999999999999999999999999 999999999999999999999999999854332 3
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
+++||+.|||||++.+..++..+|.||||+++|||++|.+||.......+.......- ....+.-.+.+.+++++
T Consensus 184 tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-----~~~~p~~ls~~ardll~ 258 (357)
T KOG0598|consen 184 TFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-----LPLPPGYLSEEARDLLK 258 (357)
T ss_pred cccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-----CCCCCccCCHHHHHHHH
Confidence 5689999999999999999999999999999999999999998776554443333321 01122225578999999
Q ss_pred HhhhcCCCCCCC
Q 018348 157 RCLQYEPRERPN 168 (357)
Q Consensus 157 ~cl~~~p~~Rps 168 (357)
+.|+.||.+|..
T Consensus 259 ~LL~rdp~~RLg 270 (357)
T KOG0598|consen 259 KLLKRDPRQRLG 270 (357)
T ss_pred HHhccCHHHhcC
Confidence 999999999953
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-32 Score=244.31 Aligned_cols=165 Identities=22% Similarity=0.342 Sum_probs=141.2
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC------
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------ 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------ 75 (357)
|||.|-++|. +-+.|++.-...++.+|+.||+|||+.| ||||||||+|||||.||.++|.|||.++.+.+.
T Consensus 157 ~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~ 233 (604)
T KOG0592|consen 157 PNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQEN 233 (604)
T ss_pred CCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChhhccccC
Confidence 7999999997 5689999989999999999999999999 999999999999999999999999998865421
Q ss_pred -----------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCC
Q 018348 76 -----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 144 (357)
Q Consensus 76 -----------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (357)
.+++||..|.+||++..+..+..+|+|+|||++|.|+.|++||.......+-.+.+. +.-.+|
T Consensus 234 ~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~------l~y~fp 307 (604)
T KOG0592|consen 234 PVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQA------LDYEFP 307 (604)
T ss_pred ccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHH------hcccCC
Confidence 246899999999999999999999999999999999999999876543332222211 123456
Q ss_pred chhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 145 DDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 145 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
...++.+.+||++.|..||.+|++..+|.+.
T Consensus 308 ~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 308 EGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred CCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 6677899999999999999999999999874
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-32 Score=246.19 Aligned_cols=166 Identities=18% Similarity=0.309 Sum_probs=140.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
|+||+|.|.+. ...+++.++..|.++++.||+|||.++ |+|||||.+|||++.+|.+||+|||++..+... .
T Consensus 352 m~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~ 427 (550)
T KOG0578|consen 352 MEGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS 427 (550)
T ss_pred cCCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence 78999999994 456999999999999999999999999 999999999999999999999999998876654 3
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccc-cccccCCCCchhHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li 155 (357)
+.+||+.|||||+.....|++|.||||||++++||+-|++||..+..... +..+. ........+...++.+.+++
T Consensus 428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA----lyLIa~ng~P~lk~~~klS~~~kdFL 503 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LYLIATNGTPKLKNPEKLSPELKDFL 503 (550)
T ss_pred cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH----HHHHhhcCCCCcCCccccCHHHHHHH
Confidence 67899999999999988999999999999999999999988765432211 11111 11222334556778999999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.|+++|+|+.|+++
T Consensus 504 ~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 504 DRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHhhcchhcCCCHHHHhc
Confidence 9999999999999999987
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-32 Score=256.80 Aligned_cols=263 Identities=17% Similarity=0.197 Sum_probs=197.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
|+||+|+.+|+. +++.+++.+...++++|+.|+.||-+.+ +|||||-.+|||++.+..+|++|||+++...++..
T Consensus 712 MENGsLDsFLR~-~DGqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y 789 (996)
T KOG0196|consen 712 MENGSLDSFLRQ-NDGQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY 789 (996)
T ss_pred hhCCcHHHHHhh-cCCceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeeccceEEEeccccceeecccCCCccc
Confidence 899999999975 5577999999999999999999999999 99999999999999999999999999998765541
Q ss_pred -ccC---CCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 78 -YST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 78 -~~g---t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
..| ...|+|||.+...+++.+|||||||+|+||.++ |.+|+...+... +.+.+....+.+.|.+|+..|.
T Consensus 790 tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd-----VIkaIe~gyRLPpPmDCP~aL~ 864 (996)
T KOG0196|consen 790 TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-----VIKAIEQGYRLPPPMDCPAALY 864 (996)
T ss_pred cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH-----HHHHHHhccCCCCCCCCcHHHH
Confidence 112 367999999999999999999999999999874 778876654332 2233344556677889999999
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccccCCCCCcccccCCCCCCCCCCCCCCCcccccchhhhHHHHHHHhcccCcchh
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGV 232 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~l~~~~~~~~ 232 (357)
+||..||++|..+||.+.+|+..|.++.... .......+....++...+....++.....++..+++.+......+-
T Consensus 865 qLMldCWqkdR~~RP~F~qiV~~lDklIrnP---~SLk~~~~~~~r~s~~lld~~~~~~~~f~sv~~WL~aIkm~rY~~~ 941 (996)
T KOG0196|consen 865 QLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP---NSLKTIAPESPRPSQPLLDRSGSDFTPFRSVGDWLEAIKMGRYKEH 941 (996)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc---hhhcccCCCCCCCcccccCCCCCCCcccCCHHHHHHHhhhhHHHHH
Confidence 9999999999999999999999999997652 2222222222223333333333344556688899999998887777
Q ss_pred hhhhhhhhhhhhh-HhhHHHHHHHhHHHh-ccCHHHHHHHHHH
Q 018348 233 ANELSFQMWTDQM-QETLNSKKKGDVAFR-QKDLKDAIECYTQ 273 (357)
Q Consensus 233 ~~~~~~~~~~~~~-~~~~~~~~~g~~~~~-~~~~~~Ai~~~~~ 273 (357)
+...-|....... -.++++...|..+.. +++.--.|+.++.
T Consensus 942 F~~ag~~s~~~V~q~s~eDl~~~Gitl~GhqkkIl~SIq~m~~ 984 (996)
T KOG0196|consen 942 FAAAGYTSFEDVAQMSAEDLLRLGITLAGHQKKILSSIQAMRA 984 (996)
T ss_pred HHhcCcccHHHHHhhhHHHHHhhceeecchhHHHHHHHHHHHH
Confidence 6666666555554 345677777766432 2233334444443
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=238.43 Aligned_cols=173 Identities=18% Similarity=0.205 Sum_probs=141.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~ 78 (357)
++||+|.+++. +.+.+++...+.++.+++.||.|||.. + ++||||||+||+++.++.+||+|||+++..... ...
T Consensus 104 ~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~ 180 (283)
T PHA02988 104 CTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKN 180 (283)
T ss_pred CCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEECCCCcEEEcccchHhhhccccccc
Confidence 57899999996 356899999999999999999999985 6 889999999999999999999999998765433 245
Q ss_pred cCCCCCCchhhhcC--CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 79 STNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 79 ~gt~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
.|+..|+|||.+.+ ..++.++|||||||++|||++|..||.......+...... ...+...+..++..+.+++.
T Consensus 181 ~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~----~~~~~~~~~~~~~~l~~li~ 256 (283)
T PHA02988 181 VNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIIN----KNNSLKLPLDCPLEIKCIVE 256 (283)
T ss_pred cCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh----cCCCCCCCCcCcHHHHHHHH
Confidence 67899999999976 5789999999999999999999999875433222211111 11122334456789999999
Q ss_pred HhhhcCCCCCCChhhHHHHhcccc
Q 018348 157 RCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
+||+.||++|||+.+++..|+.++
T Consensus 257 ~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 257 ACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHhcCCcccCcCHHHHHHHHHHHH
Confidence 999999999999999999998764
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=235.20 Aligned_cols=173 Identities=21% Similarity=0.290 Sum_probs=135.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
|.+||+.+.+...-...+++..+..|++++++||.|||.+| .||||||+.||||+.+|.|||+|||+.-.+.+.
T Consensus 106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~ 184 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQV 184 (516)
T ss_pred hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCceee
Confidence 78999999997554567999999999999999999999999 999999999999999999999999976543322
Q ss_pred ---CCccCCCCCCchhhhcC--CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccccc----ccccCCCCch
Q 018348 76 ---KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD----SCLEGQFTDD 146 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 146 (357)
.+++||+.|||||++.. ..|+.|+||||||++..||.+|..||.......+--..++.-+. ..+.......
T Consensus 185 ~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~ 264 (516)
T KOG0582|consen 185 TRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKK 264 (516)
T ss_pred EeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhh
Confidence 34578999999999654 46899999999999999999999988654332222222222111 1111112223
Q ss_pred hHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 147 DGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 147 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+..+.++|..||+.||.+|||+++++.
T Consensus 265 ~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 265 FSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred hcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 4567999999999999999999998875
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=241.95 Aligned_cols=160 Identities=25% Similarity=0.390 Sum_probs=126.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC------CccCCCCCCchhhh
Q 018348 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYL 90 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------~~~gt~~y~aPE~~ 90 (357)
++++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++...... ...++..|+|||++
T Consensus 170 ~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 248 (338)
T cd05102 170 PLTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI 248 (338)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHh
Confidence 5888999999999999999999999 9999999999999999999999999987643221 22346789999999
Q ss_pred cCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCCh
Q 018348 91 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169 (357)
Q Consensus 91 ~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 169 (357)
.+..++.++||||||+++|||++ |..||............... ......+..+++.+.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 324 (338)
T cd05102 249 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD----GTRMRAPENATPEIYRIMLACWQGDPKERPTF 324 (338)
T ss_pred hcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence 88889999999999999999997 88787653221110000000 01112234456789999999999999999999
Q ss_pred hhHHHHhccccc
Q 018348 170 KSLVTALSPLQK 181 (357)
Q Consensus 170 ~~i~~~L~~~~~ 181 (357)
.+|++.|+.+..
T Consensus 325 ~el~~~l~~~~~ 336 (338)
T cd05102 325 SALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHHHh
Confidence 999999987654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-31 Score=241.84 Aligned_cols=166 Identities=18% Similarity=0.301 Sum_probs=144.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
|+||-|.+||. ..+++++.+..+++.||+.|+.|+|..+ |+|||+||+|+|||..+++||+|||++..-.++ .+
T Consensus 94 v~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeT 170 (786)
T KOG0588|consen 94 VPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLET 170 (786)
T ss_pred cCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCCccccc
Confidence 68999999998 5789999999999999999999999999 999999999999999999999999998876655 46
Q ss_pred ccCCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
.+|++.|.+||++.+.+| +.++||||.|||++.|+||+.||.++....+..+...... ..|..++.+.++|+.
T Consensus 171 SCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f------~MPs~Is~eaQdLLr 244 (786)
T KOG0588|consen 171 SCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF------EMPSNISSEAQDLLR 244 (786)
T ss_pred cCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc------cCCCcCCHHHHHHHH
Confidence 789999999999999887 6699999999999999999999987655444433333322 235667789999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+|+..||+.|.|+++|...
T Consensus 245 ~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 245 RMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HHhccCccccccHHHHhhC
Confidence 9999999999999999873
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=220.97 Aligned_cols=169 Identities=21% Similarity=0.261 Sum_probs=141.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~ 77 (357)
||.|.|.|||+ ..-.+++....+|++|+.+|++|||..+ ||||||||+|||++++.++||+|||++....++. .
T Consensus 105 ~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLre 181 (411)
T KOG0599|consen 105 MPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRE 181 (411)
T ss_pred cccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEeccceeeccCCchhHHH
Confidence 68999999997 4568999999999999999999999999 9999999999999999999999999999988775 5
Q ss_pred ccCCCCCCchhhhcCC------CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 78 YSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~------~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
.+||++|+|||.+... .|+...|+|+.||++|.|+.|.+||.-.....+--..+.... .+..+.+.+.+...
T Consensus 182 lCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky--qF~speWadis~~~ 259 (411)
T KOG0599|consen 182 LCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY--QFRSPEWADISATV 259 (411)
T ss_pred hcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc--ccCCcchhhccccH
Confidence 6899999999998753 478899999999999999999988865443332222222211 22334456677889
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||.+||+.||.+|.|+.++++
T Consensus 260 KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 260 KDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHHHHeeCchhcccHHHHhc
Confidence 99999999999999999999876
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-31 Score=241.43 Aligned_cols=178 Identities=21% Similarity=0.314 Sum_probs=142.6
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC------
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------ 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------ 75 (357)
+|.||+.+|+. ....|...+.+.|+.||++|+.|||.++ |||||||+.|||+..++.|||+|||++......
T Consensus 470 eGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~ 547 (678)
T KOG0193|consen 470 EGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL 547 (678)
T ss_pred cCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeecccccc
Confidence 68899999975 4477999999999999999999999999 999999999999999999999999997654321
Q ss_pred CCccCCCCCCchhhhcC---CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
....|...|||||+++. .++++.+||||||+|+|||++|..|+.....+.+-.+.-+....+. .......++.++.
T Consensus 548 ~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd-~s~~~s~~pk~mk 626 (678)
T KOG0193|consen 548 EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD-LSKIRSNCPKAMK 626 (678)
T ss_pred CCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc-chhhhccCHHHHH
Confidence 23457889999999986 3689999999999999999999998864433332222212211111 1123446778999
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+|+..||..++++||.+.+|+..|+.+...
T Consensus 627 ~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 627 RLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred HHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 999999999999999999999988887654
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-31 Score=239.12 Aligned_cols=164 Identities=23% Similarity=0.309 Sum_probs=138.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC-CCeEEecCCCccccC-C---C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSR-D---G 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~-~~~kl~dfg~~~~~~-~---~ 75 (357)
.+||.|.+++.. .+++.+..+..++.|++.|++|+|+.+ |+||||||+||+++.+ +.+||+|||++.... . .
T Consensus 102 ~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l 178 (370)
T KOG0583|consen 102 CSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLL 178 (370)
T ss_pred cCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcc
Confidence 368999999973 789999999999999999999999999 9999999999999999 999999999998772 2 2
Q ss_pred CCccCCCCCCchhhhcCCC-CC-CcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchh-HHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGR-VT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD-GTELV 152 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~-~~-~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 152 (357)
.+.+||+.|+|||++.+.. ++ .++||||+||++|.|++|..||.......+....... ...+|..+ +.++.
T Consensus 179 ~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~------~~~~p~~~~S~~~~ 252 (370)
T KOG0583|consen 179 KTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG------EFKIPSYLLSPEAR 252 (370)
T ss_pred cCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC------CccCCCCcCCHHHH
Confidence 4678999999999999866 74 6999999999999999999999875444333331111 11234444 68899
Q ss_pred HHHHHhhhcCCCCCCChhhHH
Q 018348 153 RLASRCLQYEPRERPNPKSLV 173 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~ 173 (357)
.++.+||..||.+|+++.+|+
T Consensus 253 ~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 253 SLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred HHHHHHcCCCcccCCCHHHHh
Confidence 999999999999999999998
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-31 Score=221.97 Aligned_cols=157 Identities=19% Similarity=0.281 Sum_probs=139.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-Ccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-~~~ 79 (357)
++||-|..+|+ +.+++++..+.-++.+|+.||+|||+.+ |++|||||+|||+|.+|.+||.|||+++.....+ +.+
T Consensus 126 v~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlC 202 (355)
T KOG0616|consen 126 VPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLC 202 (355)
T ss_pred cCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEEEec
Confidence 58999999996 6789999999999999999999999999 9999999999999999999999999998876664 568
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
||+.|+|||.++..++..++|.|+|||++|||+.|.+||..+....+....... .-.+|.-.++++.+|+...|
T Consensus 203 GTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~------~v~fP~~fs~~~kdLl~~LL 276 (355)
T KOG0616|consen 203 GTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG------KVKFPSYFSSDAKDLLKKLL 276 (355)
T ss_pred CCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC------cccCCcccCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999887765555444433 22356666789999999999
Q ss_pred hcCCCCC
Q 018348 160 QYEPRER 166 (357)
Q Consensus 160 ~~~p~~R 166 (357)
+.|-.+|
T Consensus 277 ~vD~t~R 283 (355)
T KOG0616|consen 277 QVDLTKR 283 (355)
T ss_pred hhhhHhh
Confidence 9999999
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=233.53 Aligned_cols=171 Identities=17% Similarity=0.295 Sum_probs=135.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
++||+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG 160 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence 57899999886544567999999999999999999999999 999999999999999999999999998765433 23
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
..||..|+|||++.+..++.++|||||||++|+|++|+.||...............+.. ....++...+..+.+|+++
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~ 238 (285)
T cd05631 161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE--DQEEYSEKFSEDAKSICRM 238 (285)
T ss_pred CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc--ccccCCccCCHHHHHHHHH
Confidence 46899999999999888999999999999999999999888653221110000011111 1123444566789999999
Q ss_pred hhhcCCCCCCC-----hhhHHH
Q 018348 158 CLQYEPRERPN-----PKSLVT 174 (357)
Q Consensus 158 cl~~~p~~Rps-----~~~i~~ 174 (357)
||+.||.+||+ +.++++
T Consensus 239 ~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 239 LLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HhhcCHHHhcCCCCCCHHHHhc
Confidence 99999999997 566654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=250.92 Aligned_cols=346 Identities=17% Similarity=0.117 Sum_probs=216.2
Q ss_pred CCCccHHhhhccC---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccc
Q 018348 1 MPNETLAKHLFHW---------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 71 (357)
Q Consensus 1 ~~~gsL~~~l~~~---------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~ 71 (357)
++||||.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.+|.++|+|||+++.
T Consensus 84 ~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGLAk~ 162 (932)
T PRK13184 84 IEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGAAIF 162 (932)
T ss_pred CCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCccee
Confidence 5799999998531 1234677888999999999999999999 99999999999999999999999999876
Q ss_pred cCCC----------------------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhc
Q 018348 72 SRDG----------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR 129 (357)
Q Consensus 72 ~~~~----------------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~ 129 (357)
.... ....||+.|+|||++.+..++.++|||||||++|||++|..|+...........
T Consensus 163 i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~ 242 (932)
T PRK13184 163 KKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR 242 (932)
T ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh
Confidence 5110 123589999999999988899999999999999999999988765322211111
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCC-ChhhHHHHhcccccCCCCCccc-------------------
Q 018348 130 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-NPKSLVTALSPLQKETEVPSHV------------------- 189 (357)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-s~~~i~~~L~~~~~~~~~~~~~------------------- 189 (357)
.....+.. ......+++.+.+++.+||+.||++|| +++++...|+............
T Consensus 243 --~~i~~P~~-~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~e~iLl 319 (932)
T PRK13184 243 --DVILSPIE-VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFYEPILL 319 (932)
T ss_pred --hhccChhh-ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhccccchhhh
Confidence 11111100 011124557899999999999999996 5666777665543221100000
Q ss_pred ---cc-CCCCCC-----------------------------CCCCCCCCCcccccchhh-----------------hHHH
Q 018348 190 ---LM-GIPHSA-----------------------------SVSPLSPLGEACSRRDLT-----------------AIHE 219 (357)
Q Consensus 190 ---~~-~~~~~~-----------------------------~~~~~~p~~~~~~~~~~~-----------------~l~~ 219 (357)
.. ..+++. ......|......+.+.. .+.+
T Consensus 320 sk~~~~l~~s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 399 (932)
T PRK13184 320 SKYFPMLESSPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCGYGLWLHIKNNELSVSLVKN 399 (932)
T ss_pred hhhcccccCCchhheeccccccccccceeeeeeeccCccccccceecCcccccccCccccccceeeecccccceeeeecc
Confidence 00 000000 000011111111110000 0000
Q ss_pred HHHHhcccCcchhhhhhhhhhhhhhh-------------------------------HhhHHH-----------------
Q 018348 220 ILEKISYKDDEGVANELSFQMWTDQM-------------------------------QETLNS----------------- 251 (357)
Q Consensus 220 ~~~~l~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~----------------- 251 (357)
..+-.. +..........|....++. ++++.-
T Consensus 400 ~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (932)
T PRK13184 400 GLEIQK-KSQEIISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGALRVSC 478 (932)
T ss_pred cceeec-CCcccccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCceeeec
Confidence 000000 0000011111111111110 112111
Q ss_pred HHHHhHHHhccCHHHHHHHHHHHhhcCCCc--chHHHhhHHHHHHhcC-------ChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSD-------MPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 252 ~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~--~~~~~~~~a~~~~~~~-------~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
..-.++....+.|++|+..|++.-..=|.- ..++.+..|...+..- .+++|+..|++. .-.|.-+--|+.
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 557 (932)
T PRK13184 479 LAVPDAFLAEKLYDQALIFYRRIRESFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSYL-HGGVGAPLEYLG 557 (932)
T ss_pred ccCcHHHHhhHHHHHHHHHHHHHhhcCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHHh-cCCCCCchHHHh
Confidence 223567788899999999999998887661 3567888888887742 355555555442 334666677999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
++.+|..+|+|+|-+++|.-|++-=|+++.
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (932)
T PRK13184 558 KALVYQRLGEYNEEIKSLLLALKRYSQHPE 587 (932)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999998888764
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=234.66 Aligned_cols=168 Identities=21% Similarity=0.242 Sum_probs=136.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++..... .
T Consensus 75 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 151 (312)
T cd05585 75 INGGELFHHLQ--REGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTN 151 (312)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccc
Confidence 57999999996 3567999999999999999999999999 999999999999999999999999998753322 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||............... ...++...++.+.+++.
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~ 225 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE------PLRFPDGFDRDAKDLLI 225 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHH
Confidence 346899999999999888999999999999999999999988654433322221111 11234456678999999
Q ss_pred HhhhcCCCCCCChhhHHHHhc
Q 018348 157 RCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+||+.||.+||++..+.+.|.
T Consensus 226 ~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 226 GLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred HHcCCCHHHcCCCCCHHHHHc
Confidence 999999999998766655554
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=211.61 Aligned_cols=177 Identities=18% Similarity=0.220 Sum_probs=138.7
Q ss_pred CCccHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--
Q 018348 2 PNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 2 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~-~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-- 76 (357)
..|||.+.|...+ +..+++.+++.|+.+|++||++||+.. ++.||||||.||++++++.+++.|||.+......-
T Consensus 106 ~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~ 185 (302)
T KOG2345|consen 106 KRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEG 185 (302)
T ss_pred ccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeec
Confidence 3689999997553 447999999999999999999999986 69999999999999999999999999887654221
Q ss_pred -----------CccCCCCCCchhhhcC---CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCC
Q 018348 77 -----------SYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 77 -----------~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
....|..|.|||.+.- ...+.++|||||||++|.|+.|..||..... .++...-.+......-+
T Consensus 186 ~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~--~GgSlaLAv~n~q~s~P 263 (302)
T KOG2345|consen 186 SRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ--QGGSLALAVQNAQISIP 263 (302)
T ss_pred hHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh--cCCeEEEeeeccccccC
Confidence 2246899999999864 3468899999999999999999988754322 11111122222223223
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
.....++.+.++|..|++.||.+||++.+++..++.+.
T Consensus 264 ~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 264 NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 33447789999999999999999999999999887653
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-31 Score=231.34 Aligned_cols=166 Identities=18% Similarity=0.302 Sum_probs=136.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+.|||+.+.|. .+..+.+..+.-|+++++.||.|||.++ .+|||||+.||++..+|.+|++|||++...... .
T Consensus 93 ~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~ 169 (467)
T KOG0201|consen 93 CGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRK 169 (467)
T ss_pred hcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhccc
Confidence 46899999994 3445588888889999999999999999 999999999999999999999999998766543 4
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
+++||+.|||||++.+..|+.|+||||||++.+||.+|.+|+..... +.+.-++....++.+...+++.+.++|.
T Consensus 170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-----mrvlflIpk~~PP~L~~~~S~~~kEFV~ 244 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-----MRVLFLIPKSAPPRLDGDFSPPFKEFVE 244 (467)
T ss_pred cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-----ceEEEeccCCCCCccccccCHHHHHHHH
Confidence 77899999999999988999999999999999999999977654322 1222222222333444466788999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
.||..||+.|||+.+++.
T Consensus 245 ~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 245 ACLDKNPEFRPSAKELLK 262 (467)
T ss_pred HHhhcCcccCcCHHHHhh
Confidence 999999999999988765
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=228.89 Aligned_cols=172 Identities=23% Similarity=0.309 Sum_probs=137.6
Q ss_pred CCCccHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
+++|+|.++|..... +.+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+||
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~L~df 168 (283)
T cd05048 90 LAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVKISDF 168 (283)
T ss_pred CCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcEEECCC
Confidence 468999999964311 56889999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....++..|+|||.+.+..++.++||||||+++|||++ |..|+............... .
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~-----~ 243 (283)
T cd05048 169 GLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR-----Q 243 (283)
T ss_pred cceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----C
Confidence 998754322 12345778999999988889999999999999999998 88777653332221111111 1
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcc
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
....+..++..+.+|+.+||+.||.+||++.+|...|+.
T Consensus 244 ~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 244 LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 122345567899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=235.97 Aligned_cols=165 Identities=19% Similarity=0.291 Sum_probs=134.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 77 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 153 (323)
T cd05571 77 ANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence 47899999996 4568999999999999999999999999 999999999999999999999999998753221 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|||++|..||............... ...++...+..+.+++.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~ 227 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLA 227 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999888654333222111111 11234456678999999
Q ss_pred HhhhcCCCCCC-----ChhhHHH
Q 018348 157 RCLQYEPRERP-----NPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~i~~ 174 (357)
+||+.||++|| ++.+++.
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 228 GLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHccCCHHHcCCCCCCCHHHHHc
Confidence 99999999999 6777764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-30 Score=225.08 Aligned_cols=173 Identities=20% Similarity=0.308 Sum_probs=139.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~ 162 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 162 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence 47899999997545567999999999999999999999999 99999999999999999999999999876543321
Q ss_pred --ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 78 --YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 78 --~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
..++..|++||.+.+..++.++||||||+++|+|++ |..|++............. ......+..++..+.++
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l 237 (263)
T cd05052 163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-----GYRMERPEGCPPKVYEL 237 (263)
T ss_pred CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-----CCCCCCCCCCCHHHHHH
Confidence 123567999999988889999999999999999998 8777765433222111111 11223344566889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+.+||..+|++||++.++.+.|+.+
T Consensus 238 i~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 238 MRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHccCCcccCCCHHHHHHHHHhh
Confidence 9999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-30 Score=223.75 Aligned_cols=166 Identities=17% Similarity=0.213 Sum_probs=131.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC------CCeEEecCCCccccCC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED------GNPRLSTFGLMKNSRD 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~------~~~kl~dfg~~~~~~~ 74 (357)
..||+|.+||+ ..+.+++.++...+.|++.||++||+++ ||||||||.||||+.. -.+||+|||+++...+
T Consensus 91 C~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~ 167 (429)
T KOG0595|consen 91 CNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP 167 (429)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc
Confidence 36899999997 4569999999999999999999999999 9999999999999754 4689999999999886
Q ss_pred CC---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 75 GK---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 75 ~~---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
.. +.+|++.|||||++..++|+.|+|+||+|+++|++++|+.||...+..++.......- ......+......+
T Consensus 168 ~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~---~~~~~~~~~~s~~~ 244 (429)
T KOG0595|consen 168 GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGN---EIVPVLPAELSNPL 244 (429)
T ss_pred hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccc---cccCchhhhccCch
Confidence 63 6789999999999999999999999999999999999999998766554433221110 01111122223345
Q ss_pred HHHHHHhhhcCCCCCCChhhH
Q 018348 152 VRLASRCLQYEPRERPNPKSL 172 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i 172 (357)
.+++...++.++.+|.++.+.
T Consensus 245 ~~Ll~~ll~~~~~~~~~~~~~ 265 (429)
T KOG0595|consen 245 RELLISLLQRNPKDRISFEDF 265 (429)
T ss_pred hhhhhHHHhcCccccCchHHh
Confidence 567777777777777666553
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=223.33 Aligned_cols=173 Identities=24% Similarity=0.344 Sum_probs=138.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-Ccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-~~~ 79 (357)
+++|+|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... ...
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 160 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence 47899999997544556899999999999999999999999 9999999999999999999999999887544332 233
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
++..|+|||++.+..++.++||||||+++|+|++ |+.|+.............. ......+..+++.+.+++.+|
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05082 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPVVYDVMKQC 235 (256)
T ss_pred cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----CCCCCCCCCCCHHHHHHHHHH
Confidence 4568999999988889999999999999999997 8777654332222111111 111223345668899999999
Q ss_pred hhcCCCCCCChhhHHHHhccc
Q 018348 159 LQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~~L~~~ 179 (357)
|+.+|++|||+.+++..|+.+
T Consensus 236 l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 236 WHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred hcCChhhCcCHHHHHHHHhcC
Confidence 999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-30 Score=230.03 Aligned_cols=165 Identities=21% Similarity=0.269 Sum_probs=134.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-Ccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-~~~ 79 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.+|.+||+|||+++...... ...
T Consensus 83 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (291)
T cd05612 83 VPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLC 159 (291)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCccccc
Confidence 47899999996 4568999999999999999999999999 9999999999999999999999999987654432 456
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
||+.|+|||++.+..++.++|||||||++|+|++|..|+............... ...++...+..+.+++++||
T Consensus 160 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l 233 (291)
T cd05612 160 GTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG------KLEFPRHLDLYAKDLIKKLL 233 (291)
T ss_pred CChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CcCCCccCCHHHHHHHHHHc
Confidence 899999999999888899999999999999999999888654332222111111 11233344578999999999
Q ss_pred hcCCCCCCC-----hhhHHH
Q 018348 160 QYEPRERPN-----PKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rps-----~~~i~~ 174 (357)
+.||.+||+ +.+++.
T Consensus 234 ~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 234 VVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred CCCHHHccCCccCCHHHHhc
Confidence 999999995 666664
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=223.17 Aligned_cols=171 Identities=18% Similarity=0.216 Sum_probs=137.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++. ....+++..+..++.|++.||.|||+++ ++||||||.||+++.++.++|+|||++........
T Consensus 77 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 77 AELGPLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 36899999995 3457999999999999999999999999 99999999999999999999999999876543321
Q ss_pred ----ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 78 ----YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 78 ----~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
..++..|+|||.+....++.++|+||||+++|||++ |..||.............. ......+..+++.+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~ 228 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES-----GERMECPQRCPPEMY 228 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC-----CCCCCCCCCCCHHHH
Confidence 123468999999988888999999999999999998 8877765432222111111 111233445678899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
++|.+||+.||++||++.+|...|+..
T Consensus 229 ~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 229 DLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-30 Score=231.07 Aligned_cols=175 Identities=15% Similarity=0.215 Sum_probs=139.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ....+++..++.++.||+.||+|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 167 (316)
T cd05108 90 MPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYH 167 (316)
T ss_pred CCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCCccee
Confidence 578999999964 3456899999999999999999999999 99999999999999999999999999886543321
Q ss_pred ---ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 78 ---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 78 ---~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
..++..|++||++.+..++.++||||||+++|||++ |..|+............. .......+..++..+..
T Consensus 168 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 242 (316)
T cd05108 168 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQPPICTIDVYM 242 (316)
T ss_pred ccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-----CCCCCCCCCCCCHHHHH
Confidence 123567999999998889999999999999999997 887775543322211111 11111223345578999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
++.+||..+|++||++.+++..|..+...
T Consensus 243 li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 243 IMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 99999999999999999999998877654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=226.20 Aligned_cols=175 Identities=17% Similarity=0.241 Sum_probs=138.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|||.+++.. ..+.+++..+..|+.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 167 (279)
T cd05111 90 SPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYF 167 (279)
T ss_pred CCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCcccc
Confidence 478999999963 4567999999999999999999999999 9999999999999999999999999987653321
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...++..|++||.+.++.++.++||||||+++||+++ |..|+............ . .......+..++..+..
T Consensus 168 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~ 242 (279)
T cd05111 168 YSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL-E----KGERLAQPQICTIDVYM 242 (279)
T ss_pred cCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-H----CCCcCCCCCCCCHHHHH
Confidence 2235678999999988889999999999999999998 88777554322211110 0 00111122234567899
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
++.+||..||++|||+.++...|..+...
T Consensus 243 li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 243 VMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 99999999999999999999998887543
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=223.49 Aligned_cols=173 Identities=22% Similarity=0.297 Sum_probs=138.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 161 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence 47899999997555677999999999999999999999999 9999999999999999999999999987654322
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||++.+..++.++||||||+++|+|++ |..|+................ .......++..+.++
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l 236 (261)
T cd05072 162 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY-----RMPRMENCPDELYDI 236 (261)
T ss_pred CCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHHHHH
Confidence 1234567999999988888999999999999999998 887776543322221111111 112223455789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+.+||+.+|++||++.++...|+.+
T Consensus 237 i~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 237 MKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHHccCCcccCcCHHHHHHHHhcC
Confidence 9999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-30 Score=231.88 Aligned_cols=165 Identities=19% Similarity=0.288 Sum_probs=134.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... .
T Consensus 77 ~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 153 (328)
T cd05593 77 VNGGELFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK 153 (328)
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence 47899999986 3567999999999999999999999999 999999999999999999999999998753221 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+..+.+++.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~ 227 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------DIKFPRTLSADAKSLLS 227 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC------CccCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999988654333222111111 11234455678999999
Q ss_pred HhhhcCCCCCC-----ChhhHHH
Q 018348 157 RCLQYEPRERP-----NPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~i~~ 174 (357)
+||+.||++|| ++.+++.
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 228 GLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHcCCCHHHcCCCCCCCHHHHhc
Confidence 99999999997 6777765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=226.57 Aligned_cols=176 Identities=21% Similarity=0.253 Sum_probs=138.9
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
++||+|.+++.... .+.+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+||
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df 167 (291)
T cd05094 89 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKIGDF 167 (291)
T ss_pred CCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEECCC
Confidence 47899999996421 234899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|++...... ....++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .
T Consensus 168 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-----~ 242 (291)
T cd05094 168 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG-----R 242 (291)
T ss_pred CcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC-----C
Confidence 998754332 22345678999999988889999999999999999998 88776543322211111111 1
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
....+..++..+.+++.+||+.+|++||++.+|++.|+.+...
T Consensus 243 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 243 VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1122334567899999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=243.04 Aligned_cols=169 Identities=17% Similarity=0.271 Sum_probs=137.8
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--- 75 (357)
+++|+|.++|... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 121 ~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~ 199 (496)
T PTZ00283 121 ANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD 199 (496)
T ss_pred CCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecccCeeccccccc
Confidence 4789999999643 2467999999999999999999999999 999999999999999999999999998764322
Q ss_pred ---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 76 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
....||..|+|||++.+..++.++||||||+++|||++|+.||................ ....+..+++.+.
T Consensus 200 ~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~ 274 (496)
T PTZ00283 200 DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR-----YDPLPPSISPEMQ 274 (496)
T ss_pred cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCCCHHHH
Confidence 24568999999999998889999999999999999999999887644332221111111 1123445668899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
+++.+||+.||.+||++.+++..
T Consensus 275 ~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 275 EIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHHHcccChhhCcCHHHHHhC
Confidence 99999999999999999998764
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-30 Score=227.85 Aligned_cols=170 Identities=28% Similarity=0.448 Sum_probs=131.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.++|.......+++.+++.|+.|++.||.|||+.+ ++|++|+++||+++.++.+||+|||+........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 47899999998655678999999999999999999999999 9999999999999999999999999987763221
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
.......|+|||.+.+..++.++||||||+++|||++ |..|+............... .....+..++..+.+
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 236 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQG-----QRLPIPDNCPKDIYS 236 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTT-----EETTSBTTSBHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccceeccchhHHHHH
Confidence 2335678999999998889999999999999999999 56666543222221111111 112234445688999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHh
Q 018348 154 LASRCLQYEPRERPNPKSLVTAL 176 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L 176 (357)
++.+||..+|++|||+.+|++.|
T Consensus 237 li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 237 LIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHhcC
Confidence 99999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=227.57 Aligned_cols=171 Identities=19% Similarity=0.252 Sum_probs=132.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 92 ~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 170 (290)
T cd07862 92 DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 170 (290)
T ss_pred CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEeccCCccccccc
Confidence 468888886545567999999999999999999999999 999999999999999999999999998765433 2345
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc--------------cccccc------
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------LTDSCL------ 139 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~--------------~~~~~~------ 139 (357)
||..|+|||++.+..++.++|||||||++|+|++|..||............... ......
T Consensus 171 ~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (290)
T cd07862 171 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ 250 (290)
T ss_pred ccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCC
Confidence 789999999998888999999999999999999999887653221110000000 000000
Q ss_pred -cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 140 -EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 140 -~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.....+..+..+.+++.+||+.||++|||+.+++.
T Consensus 251 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 251 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00111234567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-30 Score=209.13 Aligned_cols=169 Identities=20% Similarity=0.275 Sum_probs=141.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC---CCCeEEecCCCccccCCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~---~~~~kl~dfg~~~~~~~~~- 76 (357)
|.||.|..-|+. .-.+++..+-.++.||+++|.|+|.++ |||||+||+|+++.. .--+||+|||++.....+.
T Consensus 92 m~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~ 168 (355)
T KOG0033|consen 92 VTGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA 168 (355)
T ss_pred ccchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence 678888877763 356788888999999999999999999 999999999999953 3459999999999887544
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||++||+||+++..+++..+|||+-||+++-|+.|.+||.++....+.++......+ ..++..+...++..+|
T Consensus 169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd--~~~~~w~~is~~Ak~L 246 (355)
T KOG0033|consen 169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD--YPSPEWDTVTPEAKSL 246 (355)
T ss_pred cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC--CCCcccCcCCHHHHHH
Confidence 356899999999999999999999999999999999999999987666666555554333 2334555677889999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
+++||..||.+|.|+.|++.
T Consensus 247 vrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 247 IRRMLTVNPKKRITADEALK 266 (355)
T ss_pred HHHHhccChhhhccHHHHhC
Confidence 99999999999999988774
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=234.53 Aligned_cols=158 Identities=21% Similarity=0.342 Sum_probs=125.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC------CccCCCCCCchhhh
Q 018348 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYL 90 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------~~~gt~~y~aPE~~ 90 (357)
++++..+++|+.||+.||.|||+.+ ++||||||+||+++.++.++|+|||+++...... ...++..|+|||++
T Consensus 208 ~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~ 286 (374)
T cd05106 208 PLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI 286 (374)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHh
Confidence 5888999999999999999999999 9999999999999999999999999987643322 12245679999999
Q ss_pred cCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCCh
Q 018348 91 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169 (357)
Q Consensus 91 ~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 169 (357)
.+..++.++||||||+++|+|++ |..||......... ............+...++++.+++.+||+.||.+|||+
T Consensus 287 ~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 362 (374)
T cd05106 287 FDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKF----YKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTF 362 (374)
T ss_pred cCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHH----HHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 88889999999999999999997 88887653221110 00111111122233345789999999999999999999
Q ss_pred hhHHHHhccc
Q 018348 170 KSLVTALSPL 179 (357)
Q Consensus 170 ~~i~~~L~~~ 179 (357)
.+|++.|+.+
T Consensus 363 ~~l~~~l~~~ 372 (374)
T cd05106 363 SQISQLIQRQ 372 (374)
T ss_pred HHHHHHHHHH
Confidence 9999999875
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=229.30 Aligned_cols=164 Identities=21% Similarity=0.338 Sum_probs=133.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 78 ~~gg~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 78 LNGGDLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence 47999999996 3567999999999999999999999999 999999999999999999999999998754321 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||............... ...++..++..+.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~ll~ 228 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND------RPHFPRWISKEAKDCLS 228 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999988754332222111111 12234445678899999
Q ss_pred HhhhcCCCCCCChh-hHH
Q 018348 157 RCLQYEPRERPNPK-SLV 173 (357)
Q Consensus 157 ~cl~~~p~~Rps~~-~i~ 173 (357)
+||+.||++||++. +++
T Consensus 229 ~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 229 KLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHccCCHHHcCCChHHHH
Confidence 99999999999875 443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=229.74 Aligned_cols=173 Identities=20% Similarity=0.283 Sum_probs=133.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CCc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~~ 78 (357)
++||+|.+++. ....+++..+..++.|++.||.|||+.+.++||||||+||+++.++.++|+|||++...... ...
T Consensus 85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 85 MDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 57899999996 34579999999999999999999998644999999999999999999999999998765433 245
Q ss_pred cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc-------------------------
Q 018348 79 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------------- 133 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~------------------------- 133 (357)
.||..|+|||++.+..++.++|||||||++|+|++|+.|+.......+.......
T Consensus 163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence 6899999999999888999999999999999999999888543221111000000
Q ss_pred -----------------cccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 134 -----------------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 134 -----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
+.....+.......+.++.+++.+||+.||++|||+.+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000112345789999999999999999999999864
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=220.58 Aligned_cols=172 Identities=22% Similarity=0.302 Sum_probs=137.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05069 82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence 46889999997544556899999999999999999999999 9999999999999999999999999987654322
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|++||.+.+..++.++|+||||+++|+|++ |..|+............... .....+...+..+.++
T Consensus 161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 235 (260)
T cd05069 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-----YRMPCPQGCPESLHEL 235 (260)
T ss_pred CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCcccCHHHHHH
Confidence 1234678999999988889999999999999999999 77777654332221111111 1112334456789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
+.+||+.||++||++.+|.+.|+.
T Consensus 236 i~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 236 MKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHccCCcccCcCHHHHHHHHhc
Confidence 999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=231.45 Aligned_cols=159 Identities=20% Similarity=0.247 Sum_probs=130.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-Ccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-~~~ 79 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++...... ...
T Consensus 100 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 176 (329)
T PTZ00263 100 VVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLC 176 (329)
T ss_pred CCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceec
Confidence 47899999996 3567899999999999999999999999 9999999999999999999999999987664432 456
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
||+.|+|||++.+..++.++|||||||++|+|++|..||............... ....+..++..+.+++.+||
T Consensus 177 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L 250 (329)
T PTZ00263 177 GTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG------RLKFPNWFDGRARDLVKGLL 250 (329)
T ss_pred CChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CcCCCCCCCHHHHHHHHHHh
Confidence 899999999999888899999999999999999999988654332222111111 11223335578999999999
Q ss_pred hcCCCCCCC
Q 018348 160 QYEPRERPN 168 (357)
Q Consensus 160 ~~~p~~Rps 168 (357)
+.||.+||+
T Consensus 251 ~~dP~~R~~ 259 (329)
T PTZ00263 251 QTDHTKRLG 259 (329)
T ss_pred hcCHHHcCC
Confidence 999999987
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=229.88 Aligned_cols=161 Identities=20% Similarity=0.286 Sum_probs=131.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 78 ~~~g~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 78 VNGGDLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred CCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence 57899999986 4568999999999999999999999999 999999999999999999999999997753221 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............... ....+...+..+.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~ 228 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLSQDAVDILK 228 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHH
Confidence 346899999999999888899999999999999999999998765433322221111 11223345678999999
Q ss_pred HhhhcCCCCCCChh
Q 018348 157 RCLQYEPRERPNPK 170 (357)
Q Consensus 157 ~cl~~~p~~Rps~~ 170 (357)
+||+.||.+||++.
T Consensus 229 ~~L~~dP~~R~~~~ 242 (320)
T cd05590 229 AFMTKNPTMRLGSL 242 (320)
T ss_pred HHcccCHHHCCCCC
Confidence 99999999999983
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=224.94 Aligned_cols=169 Identities=20% Similarity=0.304 Sum_probs=133.8
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC---CCCccC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---GKSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~---~~~~~g 80 (357)
-+|++.+.++ ++.|++..+..|+.||++||+|+|.+| +.|||+||+|||+.....+||+|||+++.... -+.++.
T Consensus 94 ~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVS 171 (538)
T KOG0661|consen 94 CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVS 171 (538)
T ss_pred hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCCcchhhh
Confidence 3678888664 889999999999999999999999999 99999999999999888999999999997653 356788
Q ss_pred CCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchh-HH---------------hhh-ccccc--------c
Q 018348 81 NLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DL---------------IRD-RNLQM--------L 134 (357)
Q Consensus 81 t~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-~~---------------~~~-~~~~~--------~ 134 (357)
|++|.|||++.. +-|+.+.|+|++|||++|+.+-++.|++... +. +.. ..... +
T Consensus 172 TRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~ 251 (538)
T KOG0661|consen 172 TRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQV 251 (538)
T ss_pred cccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcC
Confidence 999999998765 6789999999999999999999988876311 00 000 00000 1
Q ss_pred ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 135 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 135 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
....+....| .++.+..++|.+|+.+||++|||+.++++.
T Consensus 252 ~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 252 KPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111111122 367889999999999999999999999874
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=229.92 Aligned_cols=160 Identities=24% Similarity=0.375 Sum_probs=125.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC------CccCCCCCCchhhh
Q 018348 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYL 90 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------~~~gt~~y~aPE~~ 90 (357)
++++..+..++.||+.||.|||+.+ |+||||||.||+++.++.++|+|||++....... ...++..|+|||++
T Consensus 169 ~l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 247 (337)
T cd05054 169 PLTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESI 247 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHh
Confidence 6899999999999999999999999 9999999999999999999999999987653321 23356789999999
Q ss_pred cCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCCh
Q 018348 91 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169 (357)
Q Consensus 91 ~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 169 (357)
.+..++.++|||||||++|+|++ |..|+............... ......+...+..+.+++.+||+.+|++||++
T Consensus 248 ~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~ 323 (337)
T cd05054 248 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE----GTRMRAPEYATPEIYSIMLDCWHNNPEDRPTF 323 (337)
T ss_pred cCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc----cCCCCCCccCCHHHHHHHHHHccCChhhCcCH
Confidence 98889999999999999999997 88777542211100000000 01111223445789999999999999999999
Q ss_pred hhHHHHhccccc
Q 018348 170 KSLVTALSPLQK 181 (357)
Q Consensus 170 ~~i~~~L~~~~~ 181 (357)
.+|+..|+.+..
T Consensus 324 ~ell~~l~~~~~ 335 (337)
T cd05054 324 SELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHh
Confidence 999999987643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=222.07 Aligned_cols=172 Identities=19% Similarity=0.245 Sum_probs=136.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++++|||.........
T Consensus 88 ~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 165 (266)
T cd05064 88 MSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTT 165 (266)
T ss_pred CCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccchhcc
Confidence 478999999964 3457999999999999999999999999 9999999999999999999999999865532221
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||.+.+..++.++||||||+++||+++ |..|+............... .....+..++..+.++
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 240 (266)
T cd05064 166 MSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG-----FRLPAPRNCPNLLHQL 240 (266)
T ss_pred cCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-----CCCCCCCCCCHHHHHH
Confidence 1234578999999988889999999999999999775 88887654332211111111 1112344566889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+.+||+.+|++||++.+|.+.|..+
T Consensus 241 i~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 241 MLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHcCCCchhCCCHHHHHHHHHhh
Confidence 9999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-30 Score=230.11 Aligned_cols=169 Identities=20% Similarity=0.211 Sum_probs=147.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
.+||+|.+.|.+.++..++++.++.++.|++.|+.|||++. |+|||||+.|||+..++.|+|+|||+++......
T Consensus 86 ~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~ 164 (426)
T KOG0589|consen 86 CEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLAS 164 (426)
T ss_pred cCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchhhhh
Confidence 37999999998777788999999999999999999999887 9999999999999999999999999999877653
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
+.+||+.||+||.+.+.++..|+|||||||++|||++-+.+|.......+......... .+.|.....++..+|.
T Consensus 165 tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~-----~Plp~~ys~el~~lv~ 239 (426)
T KOG0589|consen 165 TVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLY-----SPLPSMYSSELRSLVK 239 (426)
T ss_pred eecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccC-----CCCCccccHHHHHHHH
Confidence 56899999999999999999999999999999999999988876655554444444432 2345566789999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
.|+..+|..||++.+++..
T Consensus 240 ~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 240 SMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHhhcCCccCCCHHHHhhC
Confidence 9999999999999998875
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-29 Score=220.11 Aligned_cols=172 Identities=23% Similarity=0.318 Sum_probs=137.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++.++..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05070 82 MSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccc
Confidence 46899999997544567999999999999999999999999 9999999999999999999999999987654322
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||.+.+..++.++|+||||+++|+|++ |..|+.............. ......+...+..+.++
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l 235 (260)
T cd05070 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER-----GYRMPCPQDCPISLHEL 235 (260)
T ss_pred cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHH
Confidence 1234567999999988889999999999999999999 7777655332221111111 11223344566789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
+.+||..+|++|||+.++.+.|+.
T Consensus 236 i~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 236 MLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHcccCcccCcCHHHHHHHHhc
Confidence 999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=226.57 Aligned_cols=176 Identities=19% Similarity=0.256 Sum_probs=132.1
Q ss_pred CCCccHHhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEE
Q 018348 1 MPNETLAKHLFHWE-----------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 63 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl 63 (357)
+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl 179 (304)
T cd05096 101 MENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATRNCLVGENLTIKI 179 (304)
T ss_pred CCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCcchhheEEcCCccEEE
Confidence 47899999985421 134788999999999999999999999 999999999999999999999
Q ss_pred ecCCCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcC--CCCCCcchhHHhhhcccccc-
Q 018348 64 STFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG--KHIPPSHALDLIRDRNLQML- 134 (357)
Q Consensus 64 ~dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g--~~~~~~~~~~~~~~~~~~~~- 134 (357)
+|||+++...... ...++..|+|||++.++.++.++||||||+++|+|+++ ..|+................
T Consensus 180 ~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~ 259 (304)
T cd05096 180 ADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFR 259 (304)
T ss_pred CCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhh
Confidence 9999987653322 22346789999999888899999999999999999874 34443322111111000000
Q ss_pred -ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 135 -TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 135 -~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
.........++.++..+.+++.+||+.||++|||+.+|...|+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 260 DQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred hccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 0001111223456688999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=231.64 Aligned_cols=165 Identities=16% Similarity=0.199 Sum_probs=135.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ....
T Consensus 113 ~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~ 189 (340)
T PTZ00426 113 VIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLC 189 (340)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceec
Confidence 47899999996 4567999999999999999999999999 999999999999999999999999998765443 3456
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
||+.|+|||++.+..++.++|||||||++|+|++|..||................ ..+|...+..+.+++++||
T Consensus 190 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~~~li~~~l 263 (340)
T PTZ00426 190 GTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI------IYFPKFLDNNCKHLMKKLL 263 (340)
T ss_pred CChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHHHHHHHc
Confidence 8999999999998888999999999999999999999887644332222211111 1233445578899999999
Q ss_pred hcCCCCCC-----ChhhHHH
Q 018348 160 QYEPRERP-----NPKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rp-----s~~~i~~ 174 (357)
+.||.+|+ ++.+++.
T Consensus 264 ~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 264 SHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ccCHHHcCCCCCCCHHHHHc
Confidence 99999995 6777664
|
|
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=222.79 Aligned_cols=175 Identities=17% Similarity=0.225 Sum_probs=137.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ..+.+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~ 167 (279)
T cd05109 90 MPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 167 (279)
T ss_pred CCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccceee
Confidence 578999999963 3457999999999999999999999999 99999999999999999999999999876543221
Q ss_pred ---ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 78 ---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 78 ---~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
..++..|++||.+.+..++.++||||||+++|||++ |..|+............ .. ......+..++..+.+
T Consensus 168 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~ 242 (279)
T cd05109 168 ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL-EK----GERLPQPPICTIDVYM 242 (279)
T ss_pred cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HC----CCcCCCCccCCHHHHH
Confidence 223567999999988889999999999999999998 77766543222111111 01 1111223345678999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
++.+||+.||++||++.+++..|+.+...
T Consensus 243 li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 243 IMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 99999999999999999999998777544
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=220.42 Aligned_cols=173 Identities=23% Similarity=0.337 Sum_probs=139.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++....+..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~ 162 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS 162 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCcccccc
Confidence 47899999997655678999999999999999999999999 9999999999999999999999999987654332
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...++..|++||.+....++.++||||||+++++|++ |..|+............. .......+..++..+.+++
T Consensus 163 ~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i 237 (261)
T cd05148 163 DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-----AGYRMPCPAKCPQEIYKIM 237 (261)
T ss_pred CCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-----hCCcCCCCCCCCHHHHHHH
Confidence 2234567999999988888999999999999999998 777775433222111111 1112233445668899999
Q ss_pred HHhhhcCCCCCCChhhHHHHhccc
Q 018348 156 SRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
.+||+.||.+|||+.++.+.|+.+
T Consensus 238 ~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 238 LECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHcCCCchhCcCHHHHHHHHhcC
Confidence 999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=230.52 Aligned_cols=165 Identities=19% Similarity=0.307 Sum_probs=133.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 77 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 153 (323)
T cd05595 77 ANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence 57999999986 3568999999999999999999999999 999999999999999999999999987753221 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||............... ...++..+++.+.+++.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~ 227 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLA 227 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999888654332221111111 11234455688999999
Q ss_pred HhhhcCCCCCC-----ChhhHHH
Q 018348 157 RCLQYEPRERP-----NPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~i~~ 174 (357)
+||..||.+|| ++.+++.
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 228 GLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHccCCHHHhCCCCCCCHHHHHc
Confidence 99999999998 6666654
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=224.15 Aligned_cols=176 Identities=23% Similarity=0.349 Sum_probs=136.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 90 ~~~~~l~~~~~---~~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 165 (283)
T cd05080 90 VPLGSLRDYLP---KHKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 165 (283)
T ss_pred CCCCCHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcchhhc
Confidence 46899999995 346999999999999999999999999 9999999999999999999999999987654322
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhH---Hhhhcc-------ccccccccccCCC
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD---LIRDRN-------LQMLTDSCLEGQF 143 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~---~~~~~~-------~~~~~~~~~~~~~ 143 (357)
...++..|++||.+.+...+.++||||||+++++|++|..|+...... ...... .............
T Consensus 166 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (283)
T cd05080 166 VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPC 245 (283)
T ss_pred cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCC
Confidence 123456799999998888899999999999999999998776432111 010000 0000111111223
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
+..++..+.+++.+||+.+|++|||+.+|+..|+.+.
T Consensus 246 ~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 246 PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 4456689999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-30 Score=231.77 Aligned_cols=165 Identities=21% Similarity=0.313 Sum_probs=133.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---- 75 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+ .+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 77 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (325)
T cd05594 77 ANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 153 (325)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc
Confidence 47899999986 35689999999999999999999997 67 999999999999999999999999998653221
Q ss_pred CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
....||..|+|||++.+..++.++|||||||++|+|++|..||............... ...++...++.+.+++
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 227 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLL 227 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHH
Confidence 2346899999999999888999999999999999999999888654332222111111 1123444567899999
Q ss_pred HHhhhcCCCCCC-----ChhhHHH
Q 018348 156 SRCLQYEPRERP-----NPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rp-----s~~~i~~ 174 (357)
.+||+.||++|+ ++.+++.
T Consensus 228 ~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 228 SGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHhhcCHHHhCCCCCCCHHHHhc
Confidence 999999999997 7777765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=221.24 Aligned_cols=173 Identities=24% Similarity=0.284 Sum_probs=135.7
Q ss_pred CCCccHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC
Q 018348 1 MPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~ 76 (357)
|++|+|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (272)
T cd05075 88 MKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSKKIYNGD 166 (272)
T ss_pred CCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCcccccCccc
Confidence 4689999988422 2346899999999999999999999999 9999999999999999999999999988654322
Q ss_pred ------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHH
Q 018348 77 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 77 ------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
...++..|++||.+.+..++.++||||||+++|+|++ |..|+............... .....+..++.
T Consensus 167 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 241 (272)
T cd05075 167 YYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG-----NRLKQPPDCLD 241 (272)
T ss_pred ceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCH
Confidence 2234668999999998889999999999999999999 67676543322211111110 01122334567
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
.+.+++.+||+.||++|||+.+++..|+.+
T Consensus 242 ~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 242 GLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 899999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-29 Score=219.85 Aligned_cols=173 Identities=24% Similarity=0.298 Sum_probs=137.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~ 160 (262)
T cd05071 82 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 160 (262)
T ss_pred CCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccc
Confidence 47899999997544557899999999999999999999999 9999999999999999999999999987654332
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|++||+..+..++.++||||||+++|+|++ |..|+............... .....+..++..+.++
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~l 235 (262)
T cd05071 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDL 235 (262)
T ss_pred cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC-----CCCCCccccCHHHHHH
Confidence 2234567999999988889999999999999999999 66666544332221111111 1112234456789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+.+||+.+|++||++.++.+.|+..
T Consensus 236 i~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 236 MCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHccCCcccCCCHHHHHHHHHHh
Confidence 9999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=228.07 Aligned_cols=164 Identities=18% Similarity=0.272 Sum_probs=132.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||+++.... ..
T Consensus 78 ~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 78 LNGGDLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 46899999996 3567999999999999999999999999 99999999999999999999999998864321 12
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||............... ...++..++.++.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~ 228 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD------TPHYPRWITKESKDILE 228 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHH
Confidence 456899999999999888999999999999999999999988654433222111111 11233345578999999
Q ss_pred HhhhcCCCCCCChh-hHH
Q 018348 157 RCLQYEPRERPNPK-SLV 173 (357)
Q Consensus 157 ~cl~~~p~~Rps~~-~i~ 173 (357)
+||+.||++||++. ++.
T Consensus 229 ~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 229 KLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHccCCHHHcCCChHHHH
Confidence 99999999999985 454
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=229.23 Aligned_cols=160 Identities=18% Similarity=0.294 Sum_probs=131.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... .
T Consensus 83 ~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~ 159 (323)
T cd05616 83 VNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK 159 (323)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccc
Confidence 47899999996 3467999999999999999999999999 999999999999999999999999998754321 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...+|...+..+.+++.
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 233 (323)
T cd05616 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAVAICK 233 (323)
T ss_pred cCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCcCCHHHHHHHH
Confidence 456899999999999888999999999999999999999988654333222111111 11234455678999999
Q ss_pred HhhhcCCCCCCCh
Q 018348 157 RCLQYEPRERPNP 169 (357)
Q Consensus 157 ~cl~~~p~~Rps~ 169 (357)
+||+.+|++|++.
T Consensus 234 ~~l~~~p~~R~~~ 246 (323)
T cd05616 234 GLMTKHPGKRLGC 246 (323)
T ss_pred HHcccCHHhcCCC
Confidence 9999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=224.11 Aligned_cols=167 Identities=19% Similarity=0.304 Sum_probs=131.1
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-- 76 (357)
++||+|.+++... .+..+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 75 ~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 153 (280)
T cd05608 75 MNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK 153 (280)
T ss_pred CCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc
Confidence 5799999888532 3467999999999999999999999999 9999999999999999999999999987654332
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||..|+|||++.+..++.++||||||+++|+|++|+.||................... ...++..++..+.++
T Consensus 154 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 231 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSF 231 (280)
T ss_pred ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHH
Confidence 3468899999999998889999999999999999999998886432111100111111111 112344566889999
Q ss_pred HHHhhhcCCCCCCChh
Q 018348 155 ASRCLQYEPRERPNPK 170 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~ 170 (357)
+.+||+.||++||+++
T Consensus 232 i~~~l~~~P~~R~~~~ 247 (280)
T cd05608 232 CEALLAKDPEKRLGFR 247 (280)
T ss_pred HHHHhcCCHHHhcCCC
Confidence 9999999999999553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=218.61 Aligned_cols=172 Identities=17% Similarity=0.229 Sum_probs=136.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 76 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 76 ASGGPLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 478999999963 3567999999999999999999999999 99999999999999999999999999875433211
Q ss_pred ----ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 78 ----YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 78 ----~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
..++..|+|||++.+..++.++||||||+++|++++ |..|+............. .......+..+++++.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~ 228 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIE-----QGKRLDCPAECPPEMY 228 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-----CCCCCCCCCCCCHHHH
Confidence 122467999999988888999999999999999996 887775433222111111 1112233445668999
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+++.+||+.+|++||++.+|.+.|+.+
T Consensus 229 ~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 229 ALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 999999999999999999999988765
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=239.07 Aligned_cols=168 Identities=20% Similarity=0.250 Sum_probs=135.7
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--- 75 (357)
++||+|.++|... ...++++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 5799999988532 3457999999999999999999999999 999999999999999999999999998865432
Q ss_pred ---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 76 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..|+................. ...+..++..+.
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~ 300 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-----DPFPCPVSSGMK 300 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CCCCccCCHHHH
Confidence 234689999999999988899999999999999999999988865433222111111111 112334557899
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
++|.+||+.||++||++.+++.
T Consensus 301 ~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 301 ALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHhccChhhCcCHHHHHh
Confidence 9999999999999999998864
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=229.23 Aligned_cols=161 Identities=22% Similarity=0.259 Sum_probs=131.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 78 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 78 VNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 47899999996 4568999999999999999999999999 999999999999999999999999998653221 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||................ ...+...+..+.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~li~ 228 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP------LRLKPNISVSARHLLE 228 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHHHHH
Confidence 3468999999999998889999999999999999999999886543332222111111 1223344678999999
Q ss_pred HhhhcCCCCCCChh
Q 018348 157 RCLQYEPRERPNPK 170 (357)
Q Consensus 157 ~cl~~~p~~Rps~~ 170 (357)
+||+.||.+||++.
T Consensus 229 ~~l~~~p~~R~~~~ 242 (323)
T cd05575 229 GLLQKDRTKRLGAK 242 (323)
T ss_pred HHhhcCHHhCCCCC
Confidence 99999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=228.36 Aligned_cols=165 Identities=17% Similarity=0.270 Sum_probs=132.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 78 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 78 VNGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence 47899999996 4567999999999999999999999999 999999999999999999999999988753221 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++||||||+++|+|++|+.||............... ....+..++..+.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~ll~ 228 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD------DVLYPVWLSKEAVSILK 228 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999988765433222211111 11223345578999999
Q ss_pred HhhhcCCCCCC-------ChhhHHH
Q 018348 157 RCLQYEPRERP-------NPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rp-------s~~~i~~ 174 (357)
+||+.||++|| ++.+++.
T Consensus 229 ~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 229 AFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHhccCHHHcCCCCCCCCCHHHHhc
Confidence 99999999999 5555553
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-29 Score=218.48 Aligned_cols=172 Identities=20% Similarity=0.287 Sum_probs=137.2
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--Ccc
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYS 79 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~--~~~ 79 (357)
++++|.+++....+..+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||+++...... ...
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEARE 162 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccC
Confidence 6899999997544567999999999999999999999999 9999999999999999999999999987654321 112
Q ss_pred C---CCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 80 T---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 80 g---t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
+ +..|+|||++.+..++.++||||||+++++|++ |+.|+............... .....+..++..+.+++
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li 237 (261)
T cd05068 163 GAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-----YRMPCPPGCPKELYDIM 237 (261)
T ss_pred CCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCcCCHHHHHHH
Confidence 2 357999999988889999999999999999999 88777654332221111111 11122344567899999
Q ss_pred HHhhhcCCCCCCChhhHHHHhccc
Q 018348 156 SRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
.+||+.+|++||++.++...|+.+
T Consensus 238 ~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 238 LDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HHHhhcCcccCCCHHHHHHHHhcC
Confidence 999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=223.36 Aligned_cols=176 Identities=22% Similarity=0.261 Sum_probs=137.8
Q ss_pred CCCccHHhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCc
Q 018348 1 MPNETLAKHLFHWE-----------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 69 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~ 69 (357)
+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~ 167 (288)
T cd05093 89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMS 167 (288)
T ss_pred CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccCCcc
Confidence 47899999996321 235899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCC
Q 018348 70 KNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 70 ~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
+...... ...++..|+|||.+.+..++.++||||||+++++|++ |..|+................. ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~-----~~ 242 (288)
T cd05093 168 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV-----LQ 242 (288)
T ss_pred ccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc-----CC
Confidence 7543221 2234678999999998889999999999999999998 7777654332221111111110 11
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.+..++..+.+++.+||+.||.+|||+.++...|+.+...
T Consensus 243 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 243 RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 2233457899999999999999999999999999888643
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=218.42 Aligned_cols=172 Identities=20% Similarity=0.276 Sum_probs=136.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCc--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-- 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 78 (357)
+++|+|.++|.. .+.+++..+..++.|++.||.|||..+ ++|+||||+||+++.++.++|+|||+++........
T Consensus 77 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 77 APLGPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 468999999963 447999999999999999999999999 999999999999999999999999998765433211
Q ss_pred -----cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 79 -----STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 79 -----~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
.++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............. ......+..++..+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~ 228 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLES-----GERLPRPEECPQEIY 228 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-----CCcCCCCCCCCHHHH
Confidence 12457999999988889999999999999999998 8877654322211111101 111223445667899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
+++.+||..+|++||++.++...|+.+.
T Consensus 229 ~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 229 SIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 9999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-29 Score=219.12 Aligned_cols=169 Identities=23% Similarity=0.337 Sum_probs=132.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC--------eEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--------PRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~--------~kl~dfg~~~~~ 72 (357)
+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++. ++++|||++...
T Consensus 81 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 81 VKFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred CCCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 478999999963 3447899999999999999999999999 999999999999987654 689999998776
Q ss_pred CCCCCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 73 RDGKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 73 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
.......++..|+|||++.+. .++.++||||||+++|+|++|..++............... ....+.....++
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 232 (258)
T cd05078 159 LPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED------RHQLPAPKWTEL 232 (258)
T ss_pred CCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc------cccCCCCCcHHH
Confidence 655566788999999999863 5789999999999999999996443222111100000000 112333445789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
.+++.+||+.+|++|||+.+|++.|+
T Consensus 233 ~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 233 ANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHHhccChhhCCCHHHHHHhcC
Confidence 99999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-29 Score=218.35 Aligned_cols=172 Identities=24% Similarity=0.317 Sum_probs=137.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++....+..+++.++..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc
Confidence 46899999997555668999999999999999999999999 9999999999999999999999999987654221
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||++.+..++.++||||||++++++++ |..|+............... .....+...+..+.++
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 235 (260)
T cd05067 161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-----YRMPRPDNCPEELYEL 235 (260)
T ss_pred cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-----CCCCCCCCCCHHHHHH
Confidence 2234578999999988888999999999999999998 88877644322221111111 1112233455789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
+.+||..+|++||+++++...|+.
T Consensus 236 i~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 236 MRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHccCChhhCCCHHHHHHHhhc
Confidence 999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=227.87 Aligned_cols=160 Identities=19% Similarity=0.303 Sum_probs=130.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..... ..
T Consensus 83 ~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05587 83 VNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR 159 (324)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCcee
Confidence 47899999996 3567899999999999999999999999 99999999999999999999999998764321 12
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+..+.+++.
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~ 233 (324)
T cd05587 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSICK 233 (324)
T ss_pred eecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999888654332221111111 12234455678999999
Q ss_pred HhhhcCCCCCCCh
Q 018348 157 RCLQYEPRERPNP 169 (357)
Q Consensus 157 ~cl~~~p~~Rps~ 169 (357)
+||+.||.+|++.
T Consensus 234 ~~l~~~P~~R~~~ 246 (324)
T cd05587 234 GLLTKHPAKRLGC 246 (324)
T ss_pred HHhhcCHHHcCCC
Confidence 9999999999986
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=228.49 Aligned_cols=163 Identities=22% Similarity=0.237 Sum_probs=132.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.++...+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.... ..
T Consensus 78 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 78 INGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence 57899999996 4567888999999999999999999999 99999999999999999999999999875322 12
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||............... ....++..+..+.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~ 228 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSARHLLE 228 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CcCCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999988754433221111111 11223345678999999
Q ss_pred HhhhcCCCCCCChhhH
Q 018348 157 RCLQYEPRERPNPKSL 172 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i 172 (357)
+||+.||.+||++.+.
T Consensus 229 ~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 229 GLLQKDRTKRLGAKDD 244 (325)
T ss_pred HHcccCHHHCCCCCCC
Confidence 9999999999998753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=227.48 Aligned_cols=165 Identities=22% Similarity=0.293 Sum_probs=132.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 82 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 47899999996 4567899999999999999999999999 999999999999999999999999998643222 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++||||||+++|||++|..||............... ....+..+++.+.+++.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~ 232 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG------KLNLPPYLTPEARDLLK 232 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 346899999999998888899999999999999999999888654332211111111 11234445678999999
Q ss_pred HhhhcCCCCCC-----ChhhHHH
Q 018348 157 RCLQYEPRERP-----NPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~i~~ 174 (357)
+||+.+|++|| ++.+++.
T Consensus 233 ~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 233 KLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHcccCHhHcCCCCCCCHHHHhc
Confidence 99999999999 6666654
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-29 Score=221.98 Aligned_cols=172 Identities=16% Similarity=0.260 Sum_probs=133.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~ 77 (357)
++||+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 75 ~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 153 (277)
T cd05607 75 MNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQ 153 (277)
T ss_pred CCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeec
Confidence 47899999986555567999999999999999999999999 9999999999999999999999999987654332 3
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
..|+..|+|||++.+..++.++|||||||++|+|++|..|+....................... ....++.++.+++.+
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~ 232 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF-EHQNFTEESKDICRL 232 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc-ccccCCHHHHHHHHH
Confidence 4578999999999888899999999999999999999988764321111111111111111110 112345789999999
Q ss_pred hhhcCCCCCCChhhHHH
Q 018348 158 CLQYEPRERPNPKSLVT 174 (357)
Q Consensus 158 cl~~~p~~Rps~~~i~~ 174 (357)
||+.||++||++.++++
T Consensus 233 ~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 233 FLAKKPEDRLGSREKND 249 (277)
T ss_pred HhccCHhhCCCCccchh
Confidence 99999999999987653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=229.97 Aligned_cols=158 Identities=21% Similarity=0.322 Sum_probs=122.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC------CccCCCCCCchhhh
Q 018348 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYL 90 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------~~~gt~~y~aPE~~ 90 (357)
.+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++...... ...++..|+|||++
T Consensus 210 ~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 288 (375)
T cd05104 210 ALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESI 288 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHh
Confidence 5889999999999999999999999 9999999999999999999999999987654322 12235679999999
Q ss_pred cCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCCh
Q 018348 91 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169 (357)
Q Consensus 91 ~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 169 (357)
.+..++.++||||||+++|+|++ |..|+............ .........+...+.++.+++.+||+.||++|||+
T Consensus 289 ~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 364 (375)
T cd05104 289 FNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM----IKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTF 364 (375)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH----HHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCH
Confidence 98889999999999999999998 66666543211100000 00011111223345789999999999999999999
Q ss_pred hhHHHHhccc
Q 018348 170 KSLVTALSPL 179 (357)
Q Consensus 170 ~~i~~~L~~~ 179 (357)
.+|++.|+..
T Consensus 365 ~eil~~l~~~ 374 (375)
T cd05104 365 KQIVQLIEQQ 374 (375)
T ss_pred HHHHHHHHhh
Confidence 9999998753
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=227.01 Aligned_cols=165 Identities=18% Similarity=0.294 Sum_probs=133.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. +.+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++..... .
T Consensus 78 ~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 78 VNGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 47899999986 3568999999999999999999999999 999999999999999999999999988653211 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||............... ...++..++..+.++++
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~ 228 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED------EVRYPRWLSKEAKSILK 228 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHH
Confidence 345899999999999888999999999999999999999988654332221111111 11233445678999999
Q ss_pred HhhhcCCCCCCCh-----hhHHH
Q 018348 157 RCLQYEPRERPNP-----KSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~-----~~i~~ 174 (357)
+||+.||++||++ .+++.
T Consensus 229 ~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 229 SFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHccCCHHHcCCCCCCCHHHHhc
Confidence 9999999999999 66654
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=230.34 Aligned_cols=165 Identities=21% Similarity=0.287 Sum_probs=127.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~ 163 (332)
T cd05614 87 VSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERT 163 (332)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCcc
Confidence 47899999996 3567999999999999999999999999 999999999999999999999999998754322
Q ss_pred CCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....||..|+|||++.+. .++.++|||||||++|+|++|..||...............+.. .....+...+..+.++
T Consensus 164 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l 241 (332)
T cd05614 164 YSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIGPEAQDL 241 (332)
T ss_pred ccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHHH
Confidence 134689999999999864 4788999999999999999999887532111000000000100 1122344456789999
Q ss_pred HHHhhhcCCCCCCChh
Q 018348 155 ASRCLQYEPRERPNPK 170 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~ 170 (357)
+.+||+.||++||++.
T Consensus 242 i~~~l~~dp~~R~~~~ 257 (332)
T cd05614 242 LHKLLRKDPKKRLGAG 257 (332)
T ss_pred HHHHcCCCHHHcCCCC
Confidence 9999999999999443
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-29 Score=226.51 Aligned_cols=164 Identities=21% Similarity=0.307 Sum_probs=132.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 78 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 78 LNGGDLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 47899999996 3467999999999999999999999999 999999999999999999999999998753221 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||.............. . ...++...+..+.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~--~----~~~~~~~~~~~~~~li~ 228 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM--D----NPCYPRWLTREAKDILV 228 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--C----CCCCCccCCHHHHHHHH
Confidence 34689999999999988899999999999999999999988865433222111110 0 11223335578899999
Q ss_pred HhhhcCCCCCCChh-hHH
Q 018348 157 RCLQYEPRERPNPK-SLV 173 (357)
Q Consensus 157 ~cl~~~p~~Rps~~-~i~ 173 (357)
+||+.||++||++. ++.
T Consensus 229 ~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 229 KLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHhccCHhhcCCChHHHH
Confidence 99999999999997 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=217.07 Aligned_cols=172 Identities=20% Similarity=0.279 Sum_probs=136.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.+||+|||+++......
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 36899999996533357899999999999999999999999 9999999999999999999999999987654421
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...++..|++||++.+..++.++||||||+++|+|++ |..|+............... ......+...+..+.
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 231 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE----GERLERPEACPQDIY 231 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc----CCcCCCCccCCHHHH
Confidence 2345678999999988889999999999999999998 88876433222111111100 011112334557899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+++.+||+.+|++|||+.++++.|.
T Consensus 232 ~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 232 NVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHHHCCCCcccCCCHHHHHHHhc
Confidence 9999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-29 Score=220.61 Aligned_cols=171 Identities=19% Similarity=0.251 Sum_probs=133.8
Q ss_pred CCccHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCC
Q 018348 2 PNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67 (357)
Q Consensus 2 ~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg 67 (357)
++++|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||.||+++.++.+||+|||
T Consensus 91 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~kl~Dfg 169 (283)
T cd05091 91 SHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLNVKISDLG 169 (283)
T ss_pred CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCceEecccc
Confidence 578888888422 1245889999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhcccccccccccc
Q 018348 68 LMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140 (357)
Q Consensus 68 ~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (357)
+++...... ...++..|+|||.+.++.++.++||||||+++|||++ |..|+............... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~-----~~ 244 (283)
T cd05091 170 LFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR-----QV 244 (283)
T ss_pred cccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----Cc
Confidence 987653321 2234678999999988889999999999999999998 66565443222221111111 11
Q ss_pred CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcc
Q 018348 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 141 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
...+..++..+.+++.+||+.+|.+||++.+|+..|+.
T Consensus 245 ~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 245 LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 23345677889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-29 Score=220.37 Aligned_cols=171 Identities=20% Similarity=0.267 Sum_probs=135.4
Q ss_pred CCCccHHhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCC
Q 018348 1 MPNETLAKHLFHWE------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 68 (357)
Q Consensus 1 ~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~ 68 (357)
++||+|.++|.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~d~g~ 168 (280)
T cd05049 90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIGDFGM 168 (280)
T ss_pred CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEECCccc
Confidence 57899999996421 245889999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccC
Q 018348 69 MKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 141 (357)
Q Consensus 69 ~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
++..... ....++..|+|||++.+..++.++||||||+++|+|++ |..|+................ ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~-----~~ 243 (280)
T cd05049 169 SRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR-----LL 243 (280)
T ss_pred ceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----cC
Confidence 8754322 12334678999999998889999999999999999998 888775433322211111111 11
Q ss_pred CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 142 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
..+..++..+.+++.+||+.||++||++.+|++.|+
T Consensus 244 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 244 QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 223345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-29 Score=222.67 Aligned_cols=177 Identities=20% Similarity=0.252 Sum_probs=137.4
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ ++||||||+||+++.++.+||+||
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~df 163 (297)
T cd05089 85 APYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASKIADF 163 (297)
T ss_pred cCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEEECCc
Confidence 47899999996421 135899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCC
Q 018348 67 GLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 67 g~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
|++...... .....+..|++||++.+..++.++|||||||++|+|++ |..||............... ....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~-----~~~~ 238 (297)
T cd05089 164 GLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-----YRME 238 (297)
T ss_pred CCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----CCCC
Confidence 987643221 11223457999999988888999999999999999997 88777554332221111111 1112
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
.+..++..+.+++.+||+.+|.+|||+.+++..|+.+....
T Consensus 239 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 239 KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 33445678999999999999999999999999988776543
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=216.35 Aligned_cols=171 Identities=26% Similarity=0.351 Sum_probs=137.8
Q ss_pred CCCccHHhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC
Q 018348 1 MPNETLAKHLFHWE-------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~ 73 (357)
+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+....
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEcccccccccc
Confidence 36899999996431 478999999999999999999999999 9999999999999999999999999988765
Q ss_pred CC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCch
Q 018348 74 DG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 146 (357)
Q Consensus 74 ~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (357)
.. ....++..|+|||.+....++.++||||||+++++|++ |..|+.............. ......+..
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~ 231 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-----GYRLPKPEY 231 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCcc
Confidence 43 23346788999999988888999999999999999998 5777655432222111111 111233445
Q ss_pred hHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 147 DGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 147 ~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
++..+.+++.+||..+|++|||+.+++..|+
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 232 CPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 5688999999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=218.26 Aligned_cols=172 Identities=22% Similarity=0.282 Sum_probs=137.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 87 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (266)
T cd05033 87 MENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYT 164 (266)
T ss_pred CCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhccccccccee
Confidence 478999999964 3457999999999999999999999999 9999999999999999999999999988764211
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...++..|++||.+.+..++.++||||||+++|+|++ |..|+............... .....+..++..+.+
T Consensus 165 ~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~ 239 (266)
T cd05033 165 TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG-----YRLPPPMDCPSALYQ 239 (266)
T ss_pred ccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHH
Confidence 1223567999999998889999999999999999998 88776544332221111111 111223445678999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
++.+||+.+|++||++.+|++.|+.+
T Consensus 240 li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 240 LMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=211.43 Aligned_cols=159 Identities=19% Similarity=0.362 Sum_probs=125.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC-CCC---CccCCCCCCchhh
Q 018348 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-DGK---SYSTNLAFTPPEY 89 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~-~~~---~~~gt~~y~aPE~ 89 (357)
....++...+.+++.|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+++... ++. .++.|++|.|||.
T Consensus 94 ~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPEL 172 (396)
T KOG0593|consen 94 YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPEL 172 (396)
T ss_pred ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhh
Confidence 3567889999999999999999999999 9999999999999999999999999999876 443 4567999999999
Q ss_pred hcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHH--------------------hhhcccccccccc------ccCC
Q 018348 90 LRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--------------------IRDRNLQMLTDSC------LEGQ 142 (357)
Q Consensus 90 ~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~--------------------~~~~~~~~~~~~~------~~~~ 142 (357)
+-+ .+|+...|||++||++.||++|.+.+++.+.-. .....+..+.-|. ++..
T Consensus 173 LvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k 252 (396)
T KOG0593|consen 173 LVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERK 252 (396)
T ss_pred hcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhh
Confidence 987 679999999999999999999998887642110 0001111111111 1111
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+| ..+.-+.++++.||..||++|++-++++.
T Consensus 253 ~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 253 YP-KISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cc-cchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 22 24456889999999999999999988764
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-29 Score=220.29 Aligned_cols=171 Identities=19% Similarity=0.282 Sum_probs=133.2
Q ss_pred CCCccHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 169 (277)
T cd05062 91 MTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 169 (277)
T ss_pred CCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCcccc
Confidence 47899999996422 134688899999999999999999999 999999999999999999999999998754
Q ss_pred CCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCc
Q 018348 73 RDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145 (357)
Q Consensus 73 ~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
.... ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+.
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~ 244 (277)
T cd05062 170 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-----GLLDKPD 244 (277)
T ss_pred CCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CcCCCCC
Confidence 3221 2234678999999988889999999999999999999 56666543322211111111 0112234
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
.++..+.+++.+||+.+|++|||+.+++..|+
T Consensus 245 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 245 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 45678999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=227.93 Aligned_cols=172 Identities=16% Similarity=0.138 Sum_probs=136.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 83 ~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~ 159 (333)
T cd05600 83 VPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVV 159 (333)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcc
Confidence 57999999995 4568999999999999999999999999 999999999999999999999999998765432 3457
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc--cccccccccCCCCchhHHHHHHHHHH
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--QMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
||..|+|||++.+..++.++|||||||++|||++|..||............. ...............++..+.+++.+
T Consensus 160 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~ 239 (333)
T cd05600 160 GSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITK 239 (333)
T ss_pred cCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHH
Confidence 8999999999998889999999999999999999999886543322111110 11010000000012345789999999
Q ss_pred hhhcCCCCCCChhhHHHH
Q 018348 158 CLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 158 cl~~~p~~Rps~~~i~~~ 175 (357)
||..+|.+||++.+++..
T Consensus 240 ~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 240 LINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HhhChhhhcCCHHHHHhC
Confidence 999999999999998864
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=230.25 Aligned_cols=169 Identities=24% Similarity=0.283 Sum_probs=134.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. .+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (350)
T cd05573 83 MPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159 (350)
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence 478999999963 378999999999999999999999999 9999999999999999999999999987654322
Q ss_pred -----------------------------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh
Q 018348 77 -----------------------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR 127 (357)
Q Consensus 77 -----------------------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~ 127 (357)
...||..|+|||++.+..++.++|||||||++|+|++|+.||.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~ 239 (350)
T cd05573 160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETY 239 (350)
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHH
Confidence 345889999999999888999999999999999999999988765432222
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCC-hhhHHHH
Q 018348 128 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-PKSLVTA 175 (357)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-~~~i~~~ 175 (357)
....... ..........+++.+.++|.+|+. ||.+||+ +.+++..
T Consensus 240 ~~i~~~~--~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 240 NKIINWK--ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHhccC--CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 1111100 011111112246789999999997 9999999 9999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=226.67 Aligned_cols=162 Identities=19% Similarity=0.250 Sum_probs=140.7
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----Ccc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----~~~ 79 (357)
|+|+.+|. .++.++++.+..|+.+++.||.|||+.. |+|||+||.|||++..|.+|+||||+++.+...+ +..
T Consensus 85 g~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik 161 (808)
T KOG0597|consen 85 GDLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK 161 (808)
T ss_pred hhHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc
Confidence 68999996 5789999999999999999999999999 9999999999999999999999999999887664 346
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
||+-|||||+..+++++..+|+||+||++||+++|++||.......+-...... +..+|...+..+..+++..|
T Consensus 162 GtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d------~v~~p~~~S~~f~nfl~gLL 235 (808)
T KOG0597|consen 162 GTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD------PVKPPSTASSSFVNFLQGLL 235 (808)
T ss_pred CcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC------CCCCcccccHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998876554433333222 12345567788999999999
Q ss_pred hcCCCCCCChhhHHH
Q 018348 160 QYEPRERPNPKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rps~~~i~~ 174 (357)
..||.+|.+..+++.
T Consensus 236 ~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 236 IKDPAQRLTWTDLLG 250 (808)
T ss_pred hcChhhcccHHHHhc
Confidence 999999999988765
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=229.45 Aligned_cols=167 Identities=23% Similarity=0.266 Sum_probs=134.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. +...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 80 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 80 LRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCcee
Confidence 47899999995 4567999999999999999999999999 999999999999999999999999998765433 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||.+.+..++.++||||||+++|+|++|+.|+............... ....+...+..+.++++
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 230 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQSLLR 230 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 346899999999998888899999999999999999999888654332221111111 11233445678999999
Q ss_pred HhhhcCCCCCCChhh--HHHHh
Q 018348 157 RCLQYEPRERPNPKS--LVTAL 176 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~--i~~~L 176 (357)
+||+.||++||++.+ +.+.+
T Consensus 231 ~~l~~~P~~R~~a~~~~~~~~~ 252 (318)
T cd05582 231 ALFKRNPANRLGAGPDGVEEIK 252 (318)
T ss_pred HHhhcCHhHcCCCCCCCHHHHh
Confidence 999999999999766 44444
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-29 Score=225.76 Aligned_cols=159 Identities=20% Similarity=0.307 Sum_probs=129.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|..++. .+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 84 ~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05589 84 AAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTS 159 (324)
T ss_pred CCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccc
Confidence 47899998884 457999999999999999999999999 999999999999999999999999987653221 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...|+..|+|||.+.+..++.++|||||||++|+|++|..||............... ...++..++..+.+++.
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 233 (324)
T cd05589 160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSREAISIMR 233 (324)
T ss_pred ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHH
Confidence 456899999999999888999999999999999999999988654332221111111 11234445678999999
Q ss_pred HhhhcCCCCCCCh
Q 018348 157 RCLQYEPRERPNP 169 (357)
Q Consensus 157 ~cl~~~p~~Rps~ 169 (357)
+||+.||++||+.
T Consensus 234 ~~L~~dP~~R~~~ 246 (324)
T cd05589 234 RLLRRNPERRLGS 246 (324)
T ss_pred HHhhcCHhHcCCC
Confidence 9999999999954
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=221.49 Aligned_cols=174 Identities=22% Similarity=0.299 Sum_probs=137.2
Q ss_pred CCCccHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
+++|+|.+++... ..+.+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+||
T Consensus 98 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~kL~Df 176 (293)
T cd05053 98 AAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVMKIADF 176 (293)
T ss_pred CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeEEeCcc
Confidence 3689999998532 2457899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...++..|+|||++.+..++.++|||||||++|+|++ |..|+............... .
T Consensus 177 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~ 251 (293)
T cd05053 177 GLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-----Y 251 (293)
T ss_pred ccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----C
Confidence 9987654322 1224567999999988889999999999999999997 77776554332221111111 1
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
....+..++..+.+++.+||..||++|||+.+++..|+.+.
T Consensus 252 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 252 RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11233445678999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=215.98 Aligned_cols=169 Identities=19% Similarity=0.274 Sum_probs=137.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++|++|.+++.......+++..++.++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 47899999997544578999999999999999999999999 9999999999999999999999999887654432
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...|+..|+|||++.+..++.++|+||||+++++|++|+.|+................. ...+..++..+.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~ 234 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF-----PPVSQMYSQQLAQLID 234 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----CCCccccCHHHHHHHH
Confidence 23578899999999988889999999999999999999988865543222221111111 1222245578999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+||+.+|++||++.+++..
T Consensus 235 ~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 235 QCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHccCCcccCcCHHHHhhC
Confidence 9999999999999998863
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=218.07 Aligned_cols=177 Identities=17% Similarity=0.252 Sum_probs=138.6
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-- 76 (357)
+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd08229 84 ADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred cCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc
Confidence 4688999988532 2457899999999999999999999999 9999999999999999999999999877654332
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||++.+...+.++|+||||+++|+|++|..|+......... ....+.........+...+..+.++
T Consensus 163 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l 240 (267)
T cd08229 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS--LCKKIEQCDYPPLPSDHYSEELRQL 240 (267)
T ss_pred cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHH--HhhhhhcCCCCCCCcccccHHHHHH
Confidence 346788999999998888899999999999999999999887543221110 0011111111111123456789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
+.+||+.+|++|||+.+|++.+.++.
T Consensus 241 i~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 241 VNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 99999999999999999999987763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=219.88 Aligned_cols=172 Identities=20% Similarity=0.245 Sum_probs=133.8
Q ss_pred CCCccHHhhhccCCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCC
Q 018348 1 MPNETLAKHLFHWET-------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg 67 (357)
+++|+|.+++..... ..+++..++.++.|++.||.|||+.+ ++||||||+||++++++.++|+|||
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~kL~dfg 167 (280)
T cd05092 89 MRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVKIGDFG 167 (280)
T ss_pred CCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEEECCCC
Confidence 478999999864321 35899999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhcccccccccccc
Q 018348 68 LMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140 (357)
Q Consensus 68 ~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (357)
++....... ...++..|++||++.+..++.++||||||+++|+|++ |..|+............... ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~ 242 (280)
T cd05092 168 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG-----RE 242 (280)
T ss_pred ceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC-----cc
Confidence 986543221 2234678999999998889999999999999999998 77666443221111111110 11
Q ss_pred CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcc
Q 018348 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 141 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
...+..+++.+.+++.+||+.||.+||++.+|...|+.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 243 LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 12233456789999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=217.87 Aligned_cols=173 Identities=21% Similarity=0.287 Sum_probs=136.2
Q ss_pred CCCccHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC
Q 018348 1 MPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~ 76 (357)
+++|+|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 89 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 167 (273)
T cd05035 89 MKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGD 167 (273)
T ss_pred cCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccceeeccccc
Confidence 4789999998543 2246899999999999999999999999 9999999999999999999999999987654332
Q ss_pred C------ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHH
Q 018348 77 S------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 77 ~------~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
. ..++..|++||.+.+..++.++||||||+++|||++ |..|+............... .....+..++.
T Consensus 168 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 242 (273)
T cd05035 168 YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG-----NRLKQPEDCLD 242 (273)
T ss_pred cccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCcCCCH
Confidence 1 224568999999988888999999999999999999 77666543322221111111 11123445667
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
.+.+++.+||+.||++|||+.+++..|+.+
T Consensus 243 ~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 243 ELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 899999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-29 Score=222.42 Aligned_cols=158 Identities=12% Similarity=0.118 Sum_probs=124.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----------CCccCCCCC
Q 018348 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----------KSYSTNLAF 84 (357)
Q Consensus 16 ~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-----------~~~~gt~~y 84 (357)
...++..+..|+.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++..... ....||+.|
T Consensus 121 ~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y 199 (294)
T PHA02882 121 KCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYY 199 (294)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccc
Confidence 34678889999999999999999999 999999999999999999999999998754321 123589999
Q ss_pred CchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh-HHh----hhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 85 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLI----RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 85 ~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
+|||++.+..++.++|||||||+++||++|..||..... ... .......+..... ....++..+.++++.||
T Consensus 200 ~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 276 (294)
T PHA02882 200 AGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVT 276 (294)
T ss_pred cCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHH
Confidence 999999988899999999999999999999988865421 110 0001111111111 12234578999999999
Q ss_pred hcCCCCCCChhhHHHHhc
Q 018348 160 QYEPRERPNPKSLVTALS 177 (357)
Q Consensus 160 ~~~p~~Rps~~~i~~~L~ 177 (357)
..+|++||++.++++.|+
T Consensus 277 ~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 277 KLSYEEKPDYDALIKIFD 294 (294)
T ss_pred hCCCCCCCCHHHHHHhhC
Confidence 999999999999998763
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=227.98 Aligned_cols=164 Identities=20% Similarity=0.234 Sum_probs=132.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. +.+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.... ..
T Consensus 78 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 78 VNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 47899999986 4568999999999999999999999999 99999999999999999999999999865322 12
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||............... ....++..+..+.++++
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ll~ 228 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK------PLVLRPGASLTAWSILE 228 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC------CccCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999888655433222211111 01122334577899999
Q ss_pred HhhhcCCCCCCChhhHH
Q 018348 157 RCLQYEPRERPNPKSLV 173 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~ 173 (357)
+|++.+|.+||++.+.+
T Consensus 229 ~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 229 ELLEKDRQRRLGAKEDF 245 (325)
T ss_pred HHhccCHHhcCCCCCCH
Confidence 99999999999987533
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=245.55 Aligned_cols=177 Identities=24% Similarity=0.327 Sum_probs=143.2
Q ss_pred CCCccHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC
Q 018348 1 MPNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~ 75 (357)
|+||+|..+|.+.. ...++....+.++.||++|+.||++++ +|||||..+|+||+....|||+|||+++.+-..
T Consensus 777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~ 855 (1025)
T KOG1095|consen 777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARDIYDK 855 (1025)
T ss_pred cccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHhhhhc
Confidence 89999999997542 457899999999999999999999999 999999999999999999999999999954333
Q ss_pred CCc------cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCC-CCCcchhHHhhhccccccccccccCCCCchhH
Q 018348 76 KSY------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 148 (357)
Q Consensus 76 ~~~------~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (357)
..+ .-...|||||.+..+.++.|+|||||||++||++|... |++.......-.. +... -+.+.|..|+
T Consensus 856 ~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~----~~~g-gRL~~P~~CP 930 (1025)
T KOG1095|consen 856 DYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD----VLEG-GRLDPPSYCP 930 (1025)
T ss_pred hheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH----HHhC-CccCCCCCCC
Confidence 211 11357999999999999999999999999999998554 4444322211111 1111 1445677888
Q ss_pred HHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 149 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 149 ~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
..+.++|.+||+.+|++||++..|+..+..+....
T Consensus 931 ~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 931 EKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred hHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 99999999999999999999999999888886653
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=220.02 Aligned_cols=177 Identities=20% Similarity=0.332 Sum_probs=135.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCc--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-- 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 78 (357)
+++|+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++........
T Consensus 89 ~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 166 (284)
T cd05081 89 LPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYK 166 (284)
T ss_pred cCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCCccee
Confidence 478999999953 3456999999999999999999999999 999999999999999999999999998865443211
Q ss_pred -----cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh---hccc--------cccccccccCC
Q 018348 79 -----STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---DRNL--------QMLTDSCLEGQ 142 (357)
Q Consensus 79 -----~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~ 142 (357)
.++..|+|||++.+..++.++||||||++++||++|..++......... .... ...........
T Consensus 167 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (284)
T cd05081 167 VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLP 246 (284)
T ss_pred ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCC
Confidence 1234599999998888999999999999999999987554322111110 0000 00001111112
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
.+..++..+.+++.+||..+|++|||+.+|+..|+.+
T Consensus 247 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 247 APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 2345667899999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-29 Score=231.18 Aligned_cols=169 Identities=18% Similarity=0.304 Sum_probs=137.0
Q ss_pred CCCccHHhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-CCCeEEecCCCccccC----
Q 018348 1 MPNETLAKHLFHWETHPM--KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSR---- 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-~~~~kl~dfg~~~~~~---- 73 (357)
+|||||.+.|.. +=+|+ ++.++-.+..||++||.|||++. |||||||.+||||+. .|.+||+|||.++...
T Consensus 654 VPGGSLSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP 731 (1226)
T KOG4279|consen 654 VPGGSLSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP 731 (1226)
T ss_pred CCCCcHHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCc
Confidence 699999999953 45778 88899999999999999999999 999999999999974 6899999999877543
Q ss_pred CCCCccCCCCCCchhhhcCC--CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 74 DGKSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 74 ~~~~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
-..++.||+.|||||++..+ .|+.++|||||||++.||.||++||....... ..+....+. ..-+..|...+.+.
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-AAMFkVGmy--KvHP~iPeelsaea 808 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-AAMFKVGMY--KVHPPIPEELSAEA 808 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-Hhhhhhcce--ecCCCCcHHHHHHH
Confidence 23577899999999999875 48899999999999999999998875432111 111111111 11235677788899
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..+|.+|+.++|.+|||+.+++.
T Consensus 809 k~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 809 KNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHcCCCcccCccHHHhcc
Confidence 99999999999999999999875
|
|
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=222.28 Aligned_cols=176 Identities=20% Similarity=0.289 Sum_probs=138.1
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
+++|+|.++|.... ...+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 103 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~~~~kl~D~ 181 (304)
T cd05101 103 ASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADF 181 (304)
T ss_pred CCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCCCcEEECCC
Confidence 46899999996432 235888999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...++..|+|||++.+..++.++||||||+++|+|++ |..|+............... .
T Consensus 182 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~ 256 (304)
T cd05101 182 GLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-----H 256 (304)
T ss_pred ccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-----C
Confidence 9987654321 1234567999999988889999999999999999998 66666543332222111111 1
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
....+..++..+.+++.+||+.+|++|||+.++++.|+++...
T Consensus 257 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 257 RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1122345668899999999999999999999999999887543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=216.39 Aligned_cols=173 Identities=24% Similarity=0.273 Sum_probs=132.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 79 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 79 MKHGDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 468999999963 3445788888999999999999999999 9999999999999999999999999987543211
Q ss_pred ----CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCC-CCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 77 ----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...++..|+|||.+.+..++.++||||||+++|||++|..| +............... .....+..++..+
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 231 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG-----RRLLQPEYCPDPL 231 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCcCCHHH
Confidence 22346689999999888899999999999999999996544 3332211111111110 0111222345789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
.+++.+||+.+|++||++.+|+..|+.+.
T Consensus 232 ~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 232 YEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 99999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=222.44 Aligned_cols=176 Identities=22% Similarity=0.312 Sum_probs=138.1
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
+++|+|.++|.... ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 100 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~~kL~Df 178 (314)
T cd05099 100 AAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDNVMKIADF 178 (314)
T ss_pred CCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCCcEEEccc
Confidence 47899999996432 246899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...++..|++||++.+..++.++||||||+++|+|++ |..|+............... .
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~ 253 (314)
T cd05099 179 GLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREG-----H 253 (314)
T ss_pred cccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----C
Confidence 9987654321 1123457999999988889999999999999999998 77666543322211111111 1
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
....+..++..+.+++.+||+.+|++|||+.+++..|..+...
T Consensus 254 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 254 RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 1123445567899999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=215.69 Aligned_cols=170 Identities=25% Similarity=0.339 Sum_probs=133.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
++|++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (256)
T cd05059 81 MANGCLLNYLRE-RKGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS 158 (256)
T ss_pred CCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceeccccccccc
Confidence 478999999964 3357899999999999999999999999 99999999999999999999999998876543221
Q ss_pred --ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 78 --YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 78 --~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
..++..|+|||.+.+..++.++|+||||+++|+|++ |..|+............... .....+..++..+.++
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 233 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-----YRLYRPKLAPTEVYTI 233 (256)
T ss_pred CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHH
Confidence 122357999999998889999999999999999999 67666543222211111111 1122334466889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+.+||..+|++|||+.+++..|.
T Consensus 234 i~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 234 MYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred HHHHhcCChhhCcCHHHHHHHhC
Confidence 99999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=203.41 Aligned_cols=167 Identities=19% Similarity=0.259 Sum_probs=131.2
Q ss_pred cHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----CccC
Q 018348 5 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYST 80 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----~~~g 80 (357)
+|+..|.+ +...++...+..++.++++||+|||+++ |+||||||.|+|++.+|.+||+|||+++.+.... ..+-
T Consensus 86 dLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~ 163 (318)
T KOG0659|consen 86 DLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVV 163 (318)
T ss_pred cHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCccccccee
Confidence 57777753 5678999999999999999999999999 9999999999999999999999999999876442 2356
Q ss_pred CCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-----------------------cccccc
Q 018348 81 NLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------------------LQMLTD 136 (357)
Q Consensus 81 t~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-----------------------~~~~~~ 136 (357)
|.+|.|||.+.+. .|+...|+||.||++.||+-|.+.+++.+.-..-... ++....
T Consensus 164 TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~ 243 (318)
T KOG0659|consen 164 TRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPK 243 (318)
T ss_pred eeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCC
Confidence 8999999999874 6899999999999999999999777664211110110 111111
Q ss_pred ccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 137 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 137 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+.... +-+.++.+..+++..||..||.+|+++++++.
T Consensus 244 ~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 244 PPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred Ccccc-ccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 11111 22345667899999999999999999999875
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=215.06 Aligned_cols=170 Identities=19% Similarity=0.299 Sum_probs=133.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ..+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||.++......
T Consensus 81 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 81 MENGCLLNYLRQ-RQGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred CCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence 478999999964 2356899999999999999999999999 9999999999999999999999999887543322
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||.+.+..++.++|+||||+++|+|++ |+.|+................ ....+...+..+.++
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~l 233 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-----RLYRPKLASMTVYEV 233 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-----CCCCCCCCCHHHHHH
Confidence 1224567999999988888999999999999999999 777765443222211111110 111222345689999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+.+||+.+|++|||+.+++..|.
T Consensus 234 i~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 234 MYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHHHccCCcccCcCHHHHHHhhC
Confidence 99999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=217.57 Aligned_cols=174 Identities=20% Similarity=0.258 Sum_probs=134.3
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
+++|+|.+++.... ...+++.++..++.|++.||+|||+.+ ++|+||||+||+++.++.+|++||
T Consensus 78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCC
Confidence 47899999996422 135889999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCC
Q 018348 67 GLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 67 g~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
|++...... .....+..|+|||++....++.++||||||+++++|++ |..||............. ......
T Consensus 157 gl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~-----~~~~~~ 231 (270)
T cd05047 157 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-----QGYRLE 231 (270)
T ss_pred CCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHh-----CCCCCC
Confidence 987533211 11223567999999988888999999999999999997 887775432221111110 011112
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
.+..++..+.+++.+||..+|.+|||+.+++..|..+.
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 232 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 23345578999999999999999999999999997763
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=215.13 Aligned_cols=170 Identities=22% Similarity=0.315 Sum_probs=133.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||.||+++.++.+||+|||.++......
T Consensus 81 ~~~~~l~~~i~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 81 MSNGCLLNYLRE-HGKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence 368999999964 2347999999999999999999999999 9999999999999999999999999877543322
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|++||.+.+..++.++||||||+++|+|++ |..|+................ ....+...+..+.++
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l 233 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL-----RLYRPHLASEKVYAI 233 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCC-----CCCCCCCCCHHHHHH
Confidence 1234567999999988888999999999999999998 877765433222211111111 111222345789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+.+||+.+|.+||++.+|+..|+
T Consensus 234 i~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 234 MYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHcCCCcccCCCHHHHHHhhC
Confidence 99999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=221.02 Aligned_cols=174 Identities=19% Similarity=0.280 Sum_probs=136.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.......+++.++..++.+++.||.|||+++ ++|+||||+||+++.++.++++|||+++......
T Consensus 121 ~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 199 (302)
T cd05055 121 CCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVV 199 (302)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCCCceee
Confidence 47899999997544445899999999999999999999999 9999999999999999999999999987654322
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............. .......+...+..+.+
T Consensus 200 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 275 (302)
T cd05055 200 KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK----EGYRMAQPEHAPAEIYD 275 (302)
T ss_pred cCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH----cCCcCCCCCCCCHHHHH
Confidence 2234678999999988889999999999999999998 8877654322111000000 00111122234578999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
++.+||+.+|++||++.+++..|+.+
T Consensus 276 li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 276 IMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 99999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=214.99 Aligned_cols=172 Identities=26% Similarity=0.396 Sum_probs=136.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
+++|+|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSK 158 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCC
Confidence 47899999997544557899999999999999999999999 999999999999999999999999998764432 2233
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
.+..|+|||.+.++.++.++|+||||+++|+|++ |..|+............... .....+..++..+.+++.+|
T Consensus 159 ~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~ 233 (254)
T cd05083 159 LPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-----YRMEPPEGCPADVYVLMTSC 233 (254)
T ss_pred CCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-----CCCCCCCcCCHHHHHHHHHH
Confidence 4567999999988889999999999999999997 87776554332221111111 11122334567899999999
Q ss_pred hhcCCCCCCChhhHHHHhcc
Q 018348 159 LQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~~L~~ 178 (357)
|+.+|++||++.+++..|+.
T Consensus 234 l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 234 WETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred cCCChhhCcCHHHHHHHHcc
Confidence 99999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=225.08 Aligned_cols=172 Identities=20% Similarity=0.309 Sum_probs=131.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CCc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~~ 78 (357)
++||+|.+++. ..+.+++..+..++.+++.||.|||+.+.++|+||||+||+++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 162 (333)
T cd06650 85 MDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (333)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence 46899999996 35678999999999999999999998533999999999999999999999999998754332 345
Q ss_pred cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc---cc-----------------------
Q 018348 79 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---LQ----------------------- 132 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~---~~----------------------- 132 (357)
.|+..|+|||++.+..++.++|||||||++|+|++|+.|+............ ..
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
T cd06650 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYG 242 (333)
T ss_pred CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhc
Confidence 6889999999999888999999999999999999999887643221111000 00
Q ss_pred --------------ccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 133 --------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 133 --------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+.....+.......+.++.+++.+||+.||++|||+.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 243 PDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred ccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 000000000001123467899999999999999999999975
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=215.98 Aligned_cols=167 Identities=19% Similarity=0.314 Sum_probs=129.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC-------eEEecCCCccccC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-------PRLSTFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~-------~kl~dfg~~~~~~ 73 (357)
+++|+|..++.. ....+++..++.++.||+.||.|||+.+ ++||||||.||+++.++. ++++|||++....
T Consensus 86 ~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~ 163 (262)
T cd05077 86 VEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVL 163 (262)
T ss_pred ccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCCcccc
Confidence 468899988853 3467999999999999999999999999 999999999999986654 8999999987665
Q ss_pred CCCCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHH-cCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 74 DGKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLL-SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 74 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
......++..|+|||++.. ..++.++||||||+++|+|+ +|..|+.......... . ..... ......+..+
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~----~~~~~--~~~~~~~~~~ 236 (262)
T cd05077 164 SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-F----YEGQC--MLVTPSCKEL 236 (262)
T ss_pred CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-H----HhcCc--cCCCCChHHH
Confidence 5555678889999999874 56888999999999999998 4666554332211110 0 00000 1122234678
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHHh
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTAL 176 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~L 176 (357)
.+++.+||+.||.+||++.+|+..+
T Consensus 237 ~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 237 ADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHhc
Confidence 9999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=218.00 Aligned_cols=172 Identities=20% Similarity=0.320 Sum_probs=135.5
Q ss_pred CCCccHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~~~~~ 169 (277)
T cd05032 91 MAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGMTRDI 169 (277)
T ss_pred CCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCcccchhh
Confidence 36899999996432 234789999999999999999999999 999999999999999999999999988754
Q ss_pred CCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCc
Q 018348 73 RDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145 (357)
Q Consensus 73 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
... ....++..|+|||.+.++.++.++||||||+++|++++ |..|+............. . ......+.
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~----~-~~~~~~~~ 244 (277)
T cd05032 170 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI----D-GGHLDLPE 244 (277)
T ss_pred ccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh----c-CCCCCCCC
Confidence 332 22345778999999988889999999999999999998 877765433222111111 1 11112344
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcc
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
.++..+.+++.+||+.+|++|||+.+++..|+.
T Consensus 245 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 245 NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 456889999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=223.16 Aligned_cols=168 Identities=22% Similarity=0.319 Sum_probs=127.1
Q ss_pred CCCc--cHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--
Q 018348 1 MPNE--TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~g--sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-- 76 (357)
|+.| +|..+|.....-...| .+..+..|++.++.++|..+ |||.||||.|+|+- .|.+||+|||++..+...+
T Consensus 439 mE~Gd~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 439 MECGDIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred eecccccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCccccc
Confidence 3444 7888886433333334 68889999999999999999 99999999999998 6789999999999887664
Q ss_pred ----CccCCCCCCchhhhcCC-----------CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccC
Q 018348 77 ----SYSTNLAFTPPEYLRTG-----------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 141 (357)
Q Consensus 77 ----~~~gt~~y~aPE~~~~~-----------~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
+++||+.||+||.+... +.+++|||||+||++|+|+.|+.||..-....- .+..+.++...-
T Consensus 516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a---Kl~aI~~P~~~I 592 (677)
T KOG0596|consen 516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA---KLHAITDPNHEI 592 (677)
T ss_pred eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH---HHHhhcCCCccc
Confidence 46799999999988441 368899999999999999999987754321111 122333332222
Q ss_pred CCCchh-HHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 142 QFTDDD-GTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 142 ~~~~~~-~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
++|.-- ..+++++++.||..||.+||++.++++
T Consensus 593 efp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 593 EFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred cccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 222111 133999999999999999999999986
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=215.05 Aligned_cols=170 Identities=26% Similarity=0.373 Sum_probs=132.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||.||+++.++.++|+|||++........
T Consensus 75 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 152 (252)
T cd05084 75 VQGGDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST 152 (252)
T ss_pred ccCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCccccccccccc
Confidence 468999999953 3457899999999999999999999999 99999999999999999999999999875433211
Q ss_pred ---ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 78 ---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 78 ---~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
..++..|+|||.+.++.++.++||||||+++|+|++ |..|+.............. ......+..++..+.+
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 227 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ-----GVRLPCPELCPDAVYR 227 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc-----CCCCCCcccCCHHHHH
Confidence 112356999999988889999999999999999997 7666543322211111111 1122334455678999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhc
Q 018348 154 LASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
++.+||+.+|++|||+.++.+.|.
T Consensus 228 li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 228 LMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHh
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=218.52 Aligned_cols=177 Identities=16% Similarity=0.220 Sum_probs=138.1
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-- 76 (357)
+++|+|.+++... +...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~ 162 (267)
T cd08228 84 ADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred cCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchhHH
Confidence 4688999988532 2356899999999999999999999999 9999999999999999999999999887654332
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||.+.+...+.++|+||||+++|+|++|..|+......... ....+.....+...+...+..+.++
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l 240 (267)
T cd08228 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS--LCQKIEQCDYPPLPTEHYSEKLREL 240 (267)
T ss_pred HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH--HHHHHhcCCCCCCChhhcCHHHHHH
Confidence 345788999999998878899999999999999999999887543221100 0000101111111222345789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
+.+||+.+|++||++.+|+..|+.+.
T Consensus 241 i~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 241 VSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 99999999999999999999988763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-29 Score=224.99 Aligned_cols=161 Identities=22% Similarity=0.272 Sum_probs=131.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.+|.+||+|||+++..... .
T Consensus 78 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 78 VNGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence 57899999885 3567899999999999999999999999 999999999999999999999999998753221 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||............... ....+...+..+.+++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~ 228 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK------PLQLPGGKTVAACDLLV 228 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999988665433222222111 11234445578999999
Q ss_pred HhhhcCCCCCCChh
Q 018348 157 RCLQYEPRERPNPK 170 (357)
Q Consensus 157 ~cl~~~p~~Rps~~ 170 (357)
+||+.+|.+||+..
T Consensus 229 ~~l~~~p~~R~~~~ 242 (321)
T cd05603 229 GLLHKDQRRRLGAK 242 (321)
T ss_pred HHccCCHhhcCCCC
Confidence 99999999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=224.27 Aligned_cols=161 Identities=16% Similarity=0.291 Sum_probs=131.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++..... .
T Consensus 83 ~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 83 VNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 47899999995 3567999999999999999999999999 999999999999999999999999998754322 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..|+............... ...++...+..+.+++.
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 233 (323)
T cd05615 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSICK 233 (323)
T ss_pred CccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHH
Confidence 345899999999999888999999999999999999999888654332221111111 11234445678899999
Q ss_pred HhhhcCCCCCCChh
Q 018348 157 RCLQYEPRERPNPK 170 (357)
Q Consensus 157 ~cl~~~p~~Rps~~ 170 (357)
+||+.+|.+|++..
T Consensus 234 ~~l~~~p~~R~~~~ 247 (323)
T cd05615 234 GLMTKHPSKRLGCG 247 (323)
T ss_pred HHcccCHhhCCCCC
Confidence 99999999999864
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-29 Score=225.33 Aligned_cols=164 Identities=16% Similarity=0.298 Sum_probs=128.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.... ..
T Consensus 78 ~~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 78 VSGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 57999999985 3568999999999999999999999999 99999999999999999999999999864221 12
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH-----hhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...||..|+|||++.+..++.++|+|||||++|+|++|+.||....... ........+... ....|..++..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~ 232 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKA 232 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHH
Confidence 3568999999999998889999999999999999999998875211100 000000011111 112344556789
Q ss_pred HHHHHHhhhcCCCCCCCh
Q 018348 152 VRLASRCLQYEPRERPNP 169 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~ 169 (357)
.+++.+||+.||.+|+++
T Consensus 233 ~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 233 SSVLKGFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHHhccCHHHcCCC
Confidence 999999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-29 Score=221.01 Aligned_cols=171 Identities=17% Similarity=0.283 Sum_probs=134.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~ 77 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 47899999986544567999999999999999999999999 9999999999999999999999999987654332 3
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
..|+..|++||++.+..++.++||||+|+++|+|++|..||...............+.. ....++...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--DQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh--cccccCcccCHHHHHHHHH
Confidence 46789999999998888999999999999999999999888654321111111111111 1122334456789999999
Q ss_pred hhhcCCCCCC-----ChhhHHH
Q 018348 158 CLQYEPRERP-----NPKSLVT 174 (357)
Q Consensus 158 cl~~~p~~Rp-----s~~~i~~ 174 (357)
||+.||++|| ++.+++.
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhc
Confidence 9999999999 6666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=215.30 Aligned_cols=166 Identities=19% Similarity=0.344 Sum_probs=129.5
Q ss_pred cHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC------CCc
Q 018348 5 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSY 78 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------~~~ 78 (357)
+|...|. .++.++...+..++.|+++||.|+|+-+ |+||||||+|++++.+..+||||||+++..... +..
T Consensus 111 DL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeY 187 (359)
T KOG0660|consen 111 DLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEY 187 (359)
T ss_pred HHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccCcccchhcc
Confidence 5677774 4556999999999999999999999999 999999999999999999999999999987531 345
Q ss_pred cCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcch-------------------hHHhhhccccccc---
Q 018348 79 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHA-------------------LDLIRDRNLQMLT--- 135 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~-------------------~~~~~~~~~~~~~--- 135 (357)
+.|.+|.|||.+.. ..++...||||.||++.||++|++.|++.. ...+.........
T Consensus 188 VaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~sl 267 (359)
T KOG0660|consen 188 VATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSL 267 (359)
T ss_pred eeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhC
Confidence 67999999998865 579999999999999999999998887631 1111111111111
Q ss_pred ----cccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 ----DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 ----~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...+...+ +...+...+|+.+||+.||.+|+|++++++
T Consensus 268 p~~p~~~f~~~f-p~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 268 PQIPKQPFSSIF-PNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred CCCCCCCHHHHc-CCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00111112 245578899999999999999999999886
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-29 Score=225.34 Aligned_cols=164 Identities=17% Similarity=0.296 Sum_probs=128.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.... ..
T Consensus 78 ~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 78 VNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 57899999885 4568999999999999999999999999 99999999999999999999999999875322 12
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH-----hhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..||....... ........+... ....|...+..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~ 232 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKA 232 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC--CCCCCCCCCHHH
Confidence 3468999999999998889999999999999999999998874211000 000000001111 112444566789
Q ss_pred HHHHHHhhhcCCCCCCCh
Q 018348 152 VRLASRCLQYEPRERPNP 169 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~ 169 (357)
.+++++||+.||.+||++
T Consensus 233 ~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 233 ASVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHHhcCCHHHcCCC
Confidence 999999999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=214.57 Aligned_cols=173 Identities=25% Similarity=0.386 Sum_probs=138.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC-cc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~-~~ 79 (357)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||.||+++.++.++|+|||.++....... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~ 160 (256)
T cd05039 82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGK 160 (256)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCC
Confidence 46899999997544457999999999999999999999999 99999999999999999999999999877643322 23
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
.+..|++||++..+.++.++|+||||++++++++ |..|+............... .....+..+++.+.+++.+|
T Consensus 161 ~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05039 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-----YRMEAPEGCPPEVYKVMKDC 235 (256)
T ss_pred CcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-----CCCCCccCCCHHHHHHHHHH
Confidence 4567999999988888999999999999999997 88776544332221111111 11122334567899999999
Q ss_pred hhcCCCCCCChhhHHHHhccc
Q 018348 159 LQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~~L~~~ 179 (357)
|..+|++||++.+++..|+.+
T Consensus 236 l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 236 WELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred hccChhhCcCHHHHHHHHhcC
Confidence 999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=218.61 Aligned_cols=174 Identities=17% Similarity=0.220 Sum_probs=138.0
Q ss_pred CCccHHhhhccCCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC
Q 018348 2 PNETLAKHLFHWET------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~ 75 (357)
++|+|.++|..... ..+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++.+...
T Consensus 92 ~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~ 170 (280)
T cd05043 92 NWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSRDLFPM 170 (280)
T ss_pred CCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCcccccCC
Confidence 67999999964321 56999999999999999999999999 999999999999999999999999998765432
Q ss_pred C------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhH
Q 018348 76 K------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 148 (357)
Q Consensus 76 ~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (357)
. ...++..|+|||++.+..++.++||||||+++|++++ |+.|+.......+....... .....+..++
T Consensus 171 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 245 (280)
T cd05043 171 DYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-----YRLAQPINCP 245 (280)
T ss_pred ceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-----CCCCCCCcCC
Confidence 2 2235678999999988888999999999999999998 88777654322222111111 1112233456
Q ss_pred HHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 149 TELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 149 ~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
..+.+++.+||..+|++|||+.+++..|+.+..
T Consensus 246 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 246 DELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 789999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=220.40 Aligned_cols=175 Identities=16% Similarity=0.254 Sum_probs=137.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 167 (303)
T cd05110 90 MPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 167 (303)
T ss_pred cCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCcccccc
Confidence 478999999863 3457899999999999999999999999 9999999999999999999999999987654322
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...++..|++||.+.+..++.++||||||+++|||++ |+.|+.............. ......+..++..+..
T Consensus 168 ~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 242 (303)
T cd05110 168 ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK-----GERLPQPPICTIDVYM 242 (303)
T ss_pred cCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC-----CCCCCCCCCCCHHHHH
Confidence 1224668999999988889999999999999999997 7777754322221111110 0111122334578899
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
++.+||..+|++||++.+++..|..+...
T Consensus 243 li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 243 VMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999887544
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=216.67 Aligned_cols=169 Identities=11% Similarity=0.135 Sum_probs=132.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++..... .
T Consensus 91 ~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (272)
T cd06637 91 CGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 169 (272)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccccccCC
Confidence 46899999997544567999999999999999999999999 999999999999999999999999998754322 2
Q ss_pred CccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...|+..|+|||++.+ ..++.++|+|||||++|+|++|..|+............. ........+..++..+
T Consensus 170 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 245 (272)
T cd06637 170 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP----RNPAPRLKSKKWSKKF 245 (272)
T ss_pred cccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh----cCCCCCCCCCCcCHHH
Confidence 3467889999999863 357889999999999999999998875432211111000 1111111223455789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+||+.+|.+|||+.+++.
T Consensus 246 ~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 246 QSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHHHHHcCCChhhCCCHHHHhh
Confidence 99999999999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=217.37 Aligned_cols=171 Identities=19% Similarity=0.285 Sum_probs=133.4
Q ss_pred CCCccHHhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC---CeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWET-----HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~---~~kl~dfg~~~~~ 72 (357)
++||+|.+++..... ..+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++ .+||+|||+++..
T Consensus 91 ~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~ 169 (277)
T cd05036 91 MAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMARDI 169 (277)
T ss_pred CCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCcccccc
Confidence 468999999964321 25899999999999999999999999 99999999999998654 5999999998765
Q ss_pred CCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCc
Q 018348 73 RDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145 (357)
Q Consensus 73 ~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
.... ....+..|+|||++.+..++.++|||||||++|+|++ |..||............. .......+.
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~-----~~~~~~~~~ 244 (277)
T cd05036 170 YRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT-----GGGRLDPPK 244 (277)
T ss_pred CCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----cCCcCCCCC
Confidence 3221 1223467999999988889999999999999999997 877776543322211111 111222344
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
.++..+.+++.+||+.+|++|||+.+|++.|+
T Consensus 245 ~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 245 GCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 55678999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=219.34 Aligned_cols=159 Identities=21% Similarity=0.231 Sum_probs=129.9
Q ss_pred CCC-CCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---------CCccCCCCC
Q 018348 15 THP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---------KSYSTNLAF 84 (357)
Q Consensus 15 ~~~-l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---------~~~~gt~~y 84 (357)
.++ +++.++.+|+++++.||+|||.++ ||||||||+|+||+++|++||+|||++..+..+ ....||+.|
T Consensus 203 d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF 281 (576)
T KOG0585|consen 203 DKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAF 281 (576)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccc
Confidence 455 899999999999999999999999 999999999999999999999999998766322 135799999
Q ss_pred CchhhhcCCC----CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhh
Q 018348 85 TPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 160 (357)
Q Consensus 85 ~aPE~~~~~~----~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 160 (357)
+|||...++. .+.+.||||+||+||.|+.|+.||.......+....... .+.-+..+++.+.+.+||.+||.
T Consensus 282 ~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~----pL~fP~~pe~~e~~kDli~~lL~ 357 (576)
T KOG0585|consen 282 FAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVND----PLEFPENPEINEDLKDLIKRLLE 357 (576)
T ss_pred cchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcC----cccCCCcccccHHHHHHHHHHhh
Confidence 9999988732 367899999999999999999999887655444333332 22222223466889999999999
Q ss_pred cCCCCCCChhhHHHHhcc
Q 018348 161 YEPRERPNPKSLVTALSP 178 (357)
Q Consensus 161 ~~p~~Rps~~~i~~~L~~ 178 (357)
+||++|.++.+|....--
T Consensus 358 KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 358 KDPEQRITLPDIKLHPWV 375 (576)
T ss_pred cChhheeehhhheeccee
Confidence 999999999998765433
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-29 Score=208.86 Aligned_cols=173 Identities=16% Similarity=0.180 Sum_probs=142.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC---CCCCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~---~~~~~kl~dfg~~~~~~~~-- 75 (357)
|+||.|...|.++..+.++++++-.|+.||+.|+.|||+.+ |.||||||+|+|.. .+-.+||+|||+++.....
T Consensus 141 meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~ 219 (400)
T KOG0604|consen 141 MEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGD 219 (400)
T ss_pred ccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecccccccccCCCcc
Confidence 78999999998877789999999999999999999999999 99999999999996 4557999999999876533
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccc--cccCCCCchhHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--CLEGQFTDDDGTELV 152 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~ 152 (357)
.+.+.|+.|.|||++...+++..+|+||+||++|-|++|-+||++.....+..+....+... .++.+-+...++...
T Consensus 220 L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aK 299 (400)
T KOG0604|consen 220 LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAK 299 (400)
T ss_pred ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHH
Confidence 34567999999999999999999999999999999999999987653332222222222221 122333455678899
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
++|+.+|..+|.+|.++.+++.
T Consensus 300 dlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 300 DLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred HHHHHHhcCCchhheeHHHhhc
Confidence 9999999999999999999876
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=221.35 Aligned_cols=176 Identities=20% Similarity=0.264 Sum_probs=136.1
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
++||+|.+++.... ...+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+||
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~kl~df 168 (303)
T cd05088 90 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADF 168 (303)
T ss_pred CCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcEEeCcc
Confidence 47899999996431 236899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCC
Q 018348 67 GLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 67 g~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
|++...... ....++..|++||.+.+..++.++||||||+++++|+| |..|+............. ......
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-----~~~~~~ 243 (303)
T cd05088 169 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-----QGYRLE 243 (303)
T ss_pred ccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh-----cCCcCC
Confidence 998643211 11223567999999987788999999999999999998 887765432222111110 111112
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.+..++..+.+++.+||+.+|++||++.+++..|..+...
T Consensus 244 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 244 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 2334557899999999999999999999999998877554
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=217.98 Aligned_cols=172 Identities=22% Similarity=0.323 Sum_probs=134.3
Q ss_pred CCCccHHhhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEec
Q 018348 1 MPNETLAKHLFHWE---------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLST 65 (357)
Q Consensus 1 ~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~d 65 (357)
+++|+|.+++.... ...+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~~kl~d 167 (283)
T cd05090 89 LNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLHVKISD 167 (283)
T ss_pred CCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCcEEecc
Confidence 46889999985321 235889999999999999999999999 99999999999999999999999
Q ss_pred CCCccccCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhcccccccccc
Q 018348 66 FGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSC 138 (357)
Q Consensus 66 fg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 138 (357)
||+++..... ....++..|++||++.+..++.++||||||+++|||++ |..|+................
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~---- 243 (283)
T cd05090 168 LGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQ---- 243 (283)
T ss_pred ccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC----
Confidence 9998764322 12334667999999988889999999999999999998 777765433222111111111
Q ss_pred ccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcc
Q 018348 139 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 139 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
....+..++..+.+++.+||+.||.+||++.+|.+.|..
T Consensus 244 -~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 244 -LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 112334456789999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=221.88 Aligned_cols=176 Identities=22% Similarity=0.297 Sum_probs=137.6
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
+++|+|.++|.... ...+++.+++.++.|++.||+|||+.+ ++||||||+||+++.++.++|+||
T Consensus 106 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~~kL~df 184 (307)
T cd05098 106 ASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADF 184 (307)
T ss_pred CCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCCCcEEECCC
Confidence 46899999996432 135899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .
T Consensus 185 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~ 259 (307)
T cd05098 185 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG-----H 259 (307)
T ss_pred cccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcC-----C
Confidence 9987554321 1123467999999988888999999999999999998 66666543322211111111 1
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
....+..++..+.+++.+||..+|.+||++.+|+..|..+...
T Consensus 260 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 260 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1123344567899999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=214.73 Aligned_cols=168 Identities=24% Similarity=0.354 Sum_probs=131.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-------CeEEecCCCccccC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-------NPRLSTFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-------~~kl~dfg~~~~~~ 73 (357)
+++|+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++ .++|+|||++....
T Consensus 82 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~ 159 (259)
T cd05037 82 VKFGPLDVFLHR-EKNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVL 159 (259)
T ss_pred CCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCcccccc
Confidence 478999999964 2337899999999999999999999999 99999999999999887 79999999988765
Q ss_pred CCCCccCCCCCCchhhhcCC--CCCCcccchhHHHHHHHHHcC-CCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 74 DGKSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 74 ~~~~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~vl~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
......++..|++||++.+. .++.++||||||+++|+|++| ..|+.......... ... . ....+......
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-~~~---~---~~~~~~~~~~~ 232 (259)
T cd05037 160 SREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-FYQ---D---QHRLPMPDCAE 232 (259)
T ss_pred cccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-HHh---c---CCCCCCCCchH
Confidence 55555677889999999876 689999999999999999996 44443221111100 000 0 01112222268
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+.+++.+||..+|.+||++.+|+..|+
T Consensus 233 ~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 233 LANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 899999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-28 Score=214.12 Aligned_cols=172 Identities=24% Similarity=0.336 Sum_probs=137.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++++|.+++....+..+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++++|||+++......
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR 161 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence 47899999997545568999999999999999999999999 9999999999999999999999999987654321
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||.+.+..++.++|+||||++++++++ |+.|+............... .....+...+..+.++
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 236 (261)
T cd05034 162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG-----YRMPRPPNCPEELYDL 236 (261)
T ss_pred hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHH
Confidence 1224567999999998889999999999999999998 88777553322211111111 1112233445789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
+.+||+.+|++||++.++.+.|+.
T Consensus 237 i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 237 MLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHcccCcccCCCHHHHHHHHhc
Confidence 999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=213.76 Aligned_cols=168 Identities=17% Similarity=0.235 Sum_probs=135.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++++|.+++.......+++.+++.++.+++.||.+||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 46899999997544567999999999999999999999999 999999999999999999999999998765332 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|+|||++.+..++.++|+||||+++++|++|+.|+................ ....+...+..+.+++.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 235 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-----LPPMPKDYSPELGELIA 235 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC-----CCCCccccCHHHHHHHH
Confidence 3457889999999998888999999999999999999998876543222111111111 11233445678999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.+|++||++.+++.
T Consensus 236 ~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 236 TMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HHhccCcccCCCHHHHhc
Confidence 999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-28 Score=213.48 Aligned_cols=172 Identities=21% Similarity=0.307 Sum_probs=136.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++....+..+++.++..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 160 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc
Confidence 46899999997555567899999999999999999999999 9999999999999999999999999887654322
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|++||++....++.++|+||||++++++++ |..|+............... .....+...+..+.++
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 235 (260)
T cd05073 161 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-----YRMPRPENCPEELYNI 235 (260)
T ss_pred cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-----CCCCCcccCCHHHHHH
Confidence 1234567999999988888999999999999999998 77777653322211111111 1112233455789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
+.+||+.+|++||++.++...|+.
T Consensus 236 i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 236 MMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHcccCcccCcCHHHHHHHHhc
Confidence 999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=215.87 Aligned_cols=175 Identities=15% Similarity=0.201 Sum_probs=127.9
Q ss_pred CCCccHHhhhccCCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWET---HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-- 75 (357)
+++|+|.++|..... ...++.....++.||+.||.|||+.+ ++||||||.||+++.++.+||+|||++......
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchh
Confidence 478999999965322 34577888999999999999999999 999999999999999999999999998653322
Q ss_pred ----CCccCCCCCCchhhhcC-------CCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCC
Q 018348 76 ----KSYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143 (357)
Q Consensus 76 ----~~~~gt~~y~aPE~~~~-------~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
....++..|+|||++.. ...+.++||||||+++|+|++ |..|+.........................
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (269)
T cd05042 156 YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQL 235 (269)
T ss_pred eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcc
Confidence 12234667999999753 346789999999999999999 565655432221111111111111111222
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+..++..+..++..|| .||++|||+.+|++.|.
T Consensus 236 ~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 236 DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 3345577888999999 59999999999998873
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=202.40 Aligned_cols=165 Identities=18% Similarity=0.159 Sum_probs=125.8
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccCCCC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 83 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~gt~~ 83 (357)
|||.+++.. .+.++++..++.|+.|++.||.|||+.+ ||+||+++.++.+++ ||+++...... ..||..
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 899999963 3567999999999999999999999986 999999999999999 99987655433 368899
Q ss_pred CCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhH-Hhhhccccccccccc-cCCCCchhHH--HHHHHHHHhh
Q 018348 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCL-EGQFTDDDGT--ELVRLASRCL 159 (357)
Q Consensus 84 y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~--~l~~li~~cl 159 (357)
|||||++.+..++.++|||||||++|||++|+.|+...... ............... ....+..... .+.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 99999999888999999999999999999999887543211 000000001010000 0011122233 6899999999
Q ss_pred hcCCCCCCChhhHHHHhccc
Q 018348 160 QYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 160 ~~~p~~Rps~~~i~~~L~~~ 179 (357)
+.+|.+||++.+++..+..+
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 150 SRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hcccccccCHHHHHHHHHHH
Confidence 99999999999999877554
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=224.22 Aligned_cols=165 Identities=17% Similarity=0.284 Sum_probs=129.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.... ..
T Consensus 78 ~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 78 VNGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 57999999885 3567999999999999999999999999 99999999999999999999999999875321 12
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH---hhhccccccccccccCCCCchhHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||....... ........+... ....|...+..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~ 232 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSVKASH 232 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCHHHHH
Confidence 3568999999999998889999999999999999999998884311100 000000011111 11234445678999
Q ss_pred HHHHhhhcCCCCCCChh
Q 018348 154 LASRCLQYEPRERPNPK 170 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~ 170 (357)
++.+||+.||.+|+++.
T Consensus 233 li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 233 VLKGFLNKDPKERLGCQ 249 (327)
T ss_pred HHHHHhccCHHHcCCCC
Confidence 99999999999999864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-29 Score=228.94 Aligned_cols=179 Identities=22% Similarity=0.382 Sum_probs=147.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCc--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-- 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 78 (357)
++||+|.++|.. ....++..+.+.++.+.++||+|||+++ +|||||-.+|+|++.++.+||+|||+++........
T Consensus 243 ~~gGsL~~~L~k-~~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~ 320 (474)
T KOG0194|consen 243 CNGGSLDDYLKK-NKKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKF 320 (474)
T ss_pred cCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceeeccc
Confidence 589999999964 3347999999999999999999999999 999999999999999999999999998775422211
Q ss_pred --cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 79 --~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
.-...|+|||.+..+.++.++|||||||++||+++ |..|+++........... ....+...|...+..+..++
T Consensus 321 ~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~----~~~~r~~~~~~~p~~~~~~~ 396 (474)
T KOG0194|consen 321 LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV----KNGYRMPIPSKTPKELAKVM 396 (474)
T ss_pred cccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH----hcCccCCCCCCCHHHHHHHH
Confidence 12468999999999999999999999999999998 677877765554443332 22233444556778999999
Q ss_pred HHhhhcCCCCCCChhhHHHHhcccccCCCC
Q 018348 156 SRCLQYEPRERPNPKSLVTALSPLQKETEV 185 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~ 185 (357)
.+||..+|++||+|.++...|+.+......
T Consensus 397 ~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 397 KQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 999999999999999999999988766554
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-28 Score=218.85 Aligned_cols=170 Identities=14% Similarity=0.186 Sum_probs=130.3
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCccC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~g 80 (357)
++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....+
T Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 169 (288)
T cd07863 91 QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVV 169 (288)
T ss_pred cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccc
Confidence 57888886544556999999999999999999999999 999999999999999999999999998765433 23457
Q ss_pred CCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc--------------cccccccc------
Q 018348 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------MLTDSCLE------ 140 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~--------------~~~~~~~~------ 140 (357)
|..|+|||++.+..++.++|||||||++|+|++|.+||.............. ........
T Consensus 170 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (288)
T cd07863 170 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRP 249 (288)
T ss_pred cccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCc
Confidence 8899999999888899999999999999999999987754322111000000 00000000
Q ss_pred -CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 141 -GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 141 -~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....+.++..+.+++.+||+.||.+|||+.+++.
T Consensus 250 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 250 VQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0111234567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-28 Score=225.15 Aligned_cols=170 Identities=15% Similarity=0.158 Sum_probs=128.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. +.+.+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~ 159 (363)
T cd05628 83 LPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF 159 (363)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCcccccccccccc
Confidence 57999999996 3568999999999999999999999999 999999999999999999999999998643211
Q ss_pred ----------------------------------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcc
Q 018348 76 ----------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 121 (357)
Q Consensus 76 ----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~ 121 (357)
...+||..|+|||++.+..++.++|||||||++|||++|..||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~ 239 (363)
T cd05628 160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (363)
T ss_pred cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence 1246899999999999888999999999999999999999998764
Q ss_pred hhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhh--cCCCCCCChhhHHHH
Q 018348 122 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ--YEPRERPNPKSLVTA 175 (357)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~~p~~Rps~~~i~~~ 175 (357)
..................+. ....++.+.+++.+++. .++..||++.+|+..
T Consensus 240 ~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 240 TPQETYKKVMNWKETLIFPP--EVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CHHHHHHHHHcCcCcccCCC--cCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 43322221111100111111 11244677888887553 234456888888763
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=217.94 Aligned_cols=171 Identities=16% Similarity=0.229 Sum_probs=129.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++++|..+.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 35666665442 3467999999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhc--c------------------ccccc
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR--N------------------LQMLT 135 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~--~------------------~~~~~ 135 (357)
....||..|+|||++.+..++.++|||||||++|+|++|+.||+.......... . .....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 134578999999999888899999999999999999999988865321110000 0 00000
Q ss_pred cccc------cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 DSCL------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 ~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+.. .......++..+.+++++||+.||++|||+++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 00111224567999999999999999999998875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-29 Score=234.90 Aligned_cols=176 Identities=24% Similarity=0.350 Sum_probs=143.7
Q ss_pred CCCccHHhhhccCC--------CC----CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCC
Q 018348 1 MPNETLAKHLFHWE--------TH----PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 68 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------~~----~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~ 68 (357)
|..|+|.++|.-.. +. +|+..+.+.|+.||+.|++||-+.. +|||||-.+|+||+++..|||+|||+
T Consensus 571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIsDfGL 649 (774)
T KOG1026|consen 571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKISDFGL 649 (774)
T ss_pred cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEeccccc
Confidence 67899999996441 12 3899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCCcc------CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccC
Q 018348 69 MKNSRDGKSYS------TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 141 (357)
Q Consensus 69 ~~~~~~~~~~~------gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
++..-...-+. -...|||||.+..++++.+|||||||||+||+++ |+.|+.+.+..+.-+..... .+ .
T Consensus 650 sRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g----~l-L 724 (774)
T KOG1026|consen 650 SRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAG----QL-L 724 (774)
T ss_pred chhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcC----Cc-c
Confidence 98654333221 1468999999999999999999999999999986 66677665443332222222 11 3
Q ss_pred CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 142 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
..|..||.++..||..||+.+|.+||||++|-..|+.....
T Consensus 725 ~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 725 SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 56778899999999999999999999999999999887554
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=205.44 Aligned_cols=158 Identities=22% Similarity=0.339 Sum_probs=126.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---CccCCCCCCchhhh
Q 018348 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYL 90 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~~~gt~~y~aPE~~ 90 (357)
-.+++++...-++...++.||.||.++..|+|||+||+|||+|+.|++|+||||++-...+.. ...|...||+||.+
T Consensus 184 ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERi 263 (391)
T KOG0983|consen 184 IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERI 263 (391)
T ss_pred hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCcccc
Confidence 457899998889999999999999988779999999999999999999999999987765553 34578999999998
Q ss_pred cC---CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh-hccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCC
Q 018348 91 RT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 166 (357)
Q Consensus 91 ~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 166 (357)
.. .+|+.++||||||++++||.||+.|+.....+..- ...... ..+.+++ -..+++.+++++..||+.|+.+|
T Consensus 264 dp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~-ePP~L~~--~~gFSp~F~~fv~~CL~kd~r~R 340 (391)
T KOG0983|consen 264 DPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE-EPPLLPG--HMGFSPDFQSFVKDCLTKDHRKR 340 (391)
T ss_pred CCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc-CCCCCCc--ccCcCHHHHHHHHHHhhcCcccC
Confidence 65 35888999999999999999999998763322211 111111 1122222 12266889999999999999999
Q ss_pred CChhhHHH
Q 018348 167 PNPKSLVT 174 (357)
Q Consensus 167 ps~~~i~~ 174 (357)
|.+.++++
T Consensus 341 P~Y~~Ll~ 348 (391)
T KOG0983|consen 341 PKYNKLLE 348 (391)
T ss_pred cchHHHhc
Confidence 99999886
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=232.00 Aligned_cols=172 Identities=19% Similarity=0.182 Sum_probs=138.9
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-C--
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-S-- 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-~-- 77 (357)
+||+|-|++..+-...|++.++++|+.++++|+.+||... ||||||||-+||||+.+|..||||||.+....... +
T Consensus 125 ~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~ 204 (738)
T KOG1989|consen 125 KGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQ 204 (738)
T ss_pred cCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHH
Confidence 6899999998665567999999999999999999999876 79999999999999999999999999876543222 1
Q ss_pred ----------ccCCCCCCchhhh---cCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCC
Q 018348 78 ----------YSTNLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 144 (357)
Q Consensus 78 ----------~~gt~~y~aPE~~---~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (357)
...|+.|.+||.+ ++.+.+.|+|||+|||+||.|+....||.......+ ......-+..
T Consensus 205 e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI--------lng~Y~~P~~ 276 (738)
T KOG1989|consen 205 EVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI--------LNGNYSFPPF 276 (738)
T ss_pred HHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE--------EeccccCCCC
Confidence 1358999999976 445789999999999999999999988864322221 2222222223
Q ss_pred chhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 145 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 145 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+..+..+..||..||+.||++||++-+|+..+..+..
T Consensus 277 p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 277 PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 4677899999999999999999999999888765543
|
|
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-28 Score=218.43 Aligned_cols=177 Identities=19% Similarity=0.338 Sum_probs=134.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 90 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 167 (284)
T cd05079 90 LPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYT 167 (284)
T ss_pred cCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCcccee
Confidence 478999999953 3346899999999999999999999999 9999999999999999999999999987654321
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhh---cccc-------ccccccccCCC
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---RNLQ-------MLTDSCLEGQF 143 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~ 143 (357)
...++..|+|||.+.+..++.++||||||+++|+|+++..|........... .... ...........
T Consensus 168 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (284)
T cd05079 168 VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPR 247 (284)
T ss_pred ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCC
Confidence 2345677999999988888999999999999999999875432211100000 0000 00000011122
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+..++..+.+++.+||+.+|++||++.+++..|+.+
T Consensus 248 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 248 PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 344668899999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=214.14 Aligned_cols=169 Identities=18% Similarity=0.247 Sum_probs=136.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++....+..++...+..++.|++.||.|||+.+ ++|+||||+||+++.++.++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYAC 158 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeecccccccc
Confidence 47899999986555667899999999999999999999999 9999999999999999999999999987654322
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|+|||++.+..++.++|+||||+++|+|++|..|+................ ....+..++..+.+++.
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 233 (255)
T cd08219 159 TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS-----YKPLPSHYSYELRSLIK 233 (255)
T ss_pred cccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC-----CCCCCcccCHHHHHHHH
Confidence 3457889999999988888999999999999999999998886543322211111111 11223345578999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+||+.||++||++.+++..
T Consensus 234 ~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 234 QMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHhCCcccCCCHHHHhhc
Confidence 9999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=220.86 Aligned_cols=177 Identities=21% Similarity=0.301 Sum_probs=138.4
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
+++|+|.++|.... ...+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 100 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~~~kL~Df 178 (334)
T cd05100 100 ASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDNVMKIADF 178 (334)
T ss_pred CCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCc
Confidence 46899999996432 235889999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~ 253 (334)
T cd05100 179 GLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-----H 253 (334)
T ss_pred ccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----C
Confidence 9987654322 1123467999999988889999999999999999998 66666543322221111111 1
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
....+..++..+.+++.+||+.+|.+||++.+++..|+.+....
T Consensus 254 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 254 RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 11233445678999999999999999999999999999887543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-28 Score=231.85 Aligned_cols=169 Identities=18% Similarity=0.283 Sum_probs=126.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCC----------------CeEEec
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDG----------------NPRLST 65 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~----------------~~kl~d 65 (357)
|++|.+++. +.+.+++..+..|+.||+.||.|||++ + ||||||||+|||++.++ .+||+|
T Consensus 215 g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~D 291 (467)
T PTZ00284 215 GPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICD 291 (467)
T ss_pred CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCCCceEEECC
Confidence 678888886 346899999999999999999999984 7 99999999999998665 499999
Q ss_pred CCCccccCCC-CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc---c----------
Q 018348 66 FGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---L---------- 131 (357)
Q Consensus 66 fg~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~---~---------- 131 (357)
||.+...... ....||..|+|||++.+..++.++|||||||++|||++|+.||............ .
T Consensus 292 fG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~ 371 (467)
T PTZ00284 292 LGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGR 371 (467)
T ss_pred CCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhh
Confidence 9987654332 3457899999999999888999999999999999999999988653211000000 0
Q ss_pred ------cccc------cccccC---------C-C-CchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 132 ------QMLT------DSCLEG---------Q-F-TDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 132 ------~~~~------~~~~~~---------~-~-~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..+. .+.... . . .....+.+.+||.+||+.||.+|||+.+++.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 372 CGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred ccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 0000 000000 0 0 0001346789999999999999999999986
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=213.98 Aligned_cols=168 Identities=17% Similarity=0.225 Sum_probs=134.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++|++|.+++. ..+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++.....
T Consensus 86 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 162 (263)
T cd06625 86 MPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGT 162 (263)
T ss_pred CCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceeccccccccc
Confidence 47899999996 3467899999999999999999999999 999999999999999999999999998654322
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....++..|+|||++.+..++.++||||||+++|+|++|+.|+............. ........+..++..+.+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 238 (263)
T cd06625 163 GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA----TQPTNPQLPSHVSPDARN 238 (263)
T ss_pred cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHh----ccCCCCCCCccCCHHHHH
Confidence 12346788999999998889999999999999999999998875432211111111 111122334456678999
Q ss_pred HHHHhhhcCCCCCCChhhHHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~ 175 (357)
++.+||..+|.+||++.+++..
T Consensus 239 li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 239 FLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHhhcCcccCCCHHHHhhC
Confidence 9999999999999999998763
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=217.21 Aligned_cols=176 Identities=15% Similarity=0.230 Sum_probs=132.0
Q ss_pred CCCccHHhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccc
Q 018348 1 MPNETLAKHLFHWE---------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 71 (357)
Q Consensus 1 ~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~ 71 (357)
+++++|.++|.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 179 (296)
T cd05051 101 MENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVGKNYTIKIADFGMSRN 179 (296)
T ss_pred CCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeecCCCceEEccccceee
Confidence 36889999996432 126899999999999999999999999 99999999999999999999999999875
Q ss_pred cCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc--CCCCCCcchhHHhhhccccc--cccccccC
Q 018348 72 SRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRDRNLQM--LTDSCLEG 141 (357)
Q Consensus 72 ~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~--g~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 141 (357)
.... ....++..|+|||++.+..++.++||||||+++|+|++ |..|+........-...... ........
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (296)
T cd05051 180 LYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYL 259 (296)
T ss_pred cccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccC
Confidence 4322 12345678999999988889999999999999999998 44444332111110000000 00001111
Q ss_pred CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 142 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
..+..++.++.+++.+||+.||++|||+.+|++.|+
T Consensus 260 ~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 260 PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 123345578999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=213.92 Aligned_cols=171 Identities=22% Similarity=0.311 Sum_probs=134.6
Q ss_pred CCCccHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-----CeEEecCCCcc
Q 018348 1 MPNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-----NPRLSTFGLMK 70 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-----~~kl~dfg~~~ 70 (357)
++||+|.++|.... ...+++.+++.++.|++.||.|||+.+ ++|+||+|+||+++.++ .++++|||++.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 47899999996432 235899999999999999999999999 99999999999999877 89999999987
Q ss_pred ccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCC
Q 018348 71 NSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143 (357)
Q Consensus 71 ~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
...... ...++..|++||++.++.++.++||||||+++|+|++ |..|+............. .......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~-----~~~~~~~ 234 (269)
T cd05044 160 DIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT-----AGGRLQK 234 (269)
T ss_pred ccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh-----cCCccCC
Confidence 543221 2234678999999998889999999999999999998 887776433222111110 0111123
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+..++..+.+++.+||..+|.+||++.+|...|+
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred cccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 3456688999999999999999999999999885
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=224.48 Aligned_cols=168 Identities=20% Similarity=0.382 Sum_probs=128.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------- 75 (357)
+++|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 163 (338)
T cd07859 87 ESDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 163 (338)
T ss_pred CCCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCccccccccccCccccc
Confidence 468888885 3567999999999999999999999999 999999999999999999999999998754321
Q ss_pred CCccCCCCCCchhhhcC--CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHh-------------------hhcccc--
Q 018348 76 KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-------------------RDRNLQ-- 132 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~-------------------~~~~~~-- 132 (357)
....||..|+|||++.+ ..++.++|||||||++|+|++|+.||........ ......
T Consensus 164 ~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 243 (338)
T cd07859 164 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRY 243 (338)
T ss_pred cCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHH
Confidence 23468899999999875 5688999999999999999999988754321100 000000
Q ss_pred --ccc---cccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 133 --MLT---DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 133 --~~~---~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+. .......+ +..++.+.+++.+||+.||++|||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 244 LSSMRKKQPVPFSQKF-PNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHhhcccCCCchHHhc-CCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000 00000001 123467889999999999999999999986
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=214.68 Aligned_cols=172 Identities=21% Similarity=0.262 Sum_probs=136.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ..+.+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++++|||++........
T Consensus 88 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 165 (268)
T cd05063 88 MENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTY 165 (268)
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceecccccccce
Confidence 478999999953 3467999999999999999999999999 99999999999999999999999999876543211
Q ss_pred ----ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 78 ----YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 78 ----~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...+..|++||++.+..++.++||||||+++|+|++ |..|+.............. ......+..++..+.
T Consensus 166 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~ 240 (268)
T cd05063 166 TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND-----GFRLPAPMDCPSAVY 240 (268)
T ss_pred eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc-----CCCCCCCCCCCHHHH
Confidence 112356999999988888999999999999999987 8888754332221111111 112222334567899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+++.+||+.+|++||++.+|++.|+++
T Consensus 241 ~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 241 QLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-28 Score=217.71 Aligned_cols=175 Identities=18% Similarity=0.273 Sum_probs=137.4
Q ss_pred CCCccHHhhhccC----------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC
Q 018348 1 MPNETLAKHLFHW----------------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 58 (357)
Q Consensus 1 ~~~gsL~~~l~~~----------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~ 58 (357)
+++|+|.++|... ....+++.+++.++.|++.||.|||+.+ ++||||||+||+++++
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill~~~ 163 (290)
T cd05045 85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLVAEG 163 (290)
T ss_pred cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEEcCC
Confidence 3678999988532 1245889999999999999999999999 9999999999999999
Q ss_pred CCeEEecCCCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccc
Q 018348 59 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 131 (357)
Q Consensus 59 ~~~kl~dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~ 131 (357)
+.++|+|||+++...... ...++..|++||.+.+..++.++||||||+++++|++ |..|+.............
T Consensus 164 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~ 243 (290)
T cd05045 164 RKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLK 243 (290)
T ss_pred CcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Confidence 999999999987543221 2234678999999988888999999999999999998 887776543322211111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
.......+..++..+.+++.+||+.+|++||++.+++..|+.+..
T Consensus 244 -----~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 244 -----TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -----CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 111122334456789999999999999999999999999987743
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-28 Score=213.59 Aligned_cols=175 Identities=17% Similarity=0.180 Sum_probs=128.9
Q ss_pred CCCccHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-
Q 018348 1 MPNETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~- 76 (357)
+++|+|.++|.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence 57899999996432 235677888899999999999999999 9999999999999999999999999886543221
Q ss_pred -----CccCCCCCCchhhhcCC-------CCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCC
Q 018348 77 -----SYSTNLAFTPPEYLRTG-------RVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143 (357)
Q Consensus 77 -----~~~gt~~y~aPE~~~~~-------~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
...++..|+|||++.+. .++.++|+||||+++|||++ |..|+.........................
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (269)
T cd05087 156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRL 235 (269)
T ss_pred eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCcc
Confidence 23456789999998642 35789999999999999996 887775433222111111110000111112
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
....+..+.+++.+|| .+|++|||+.+|+..|+
T Consensus 236 ~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 236 KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 2234567889999999 68999999999998875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=216.04 Aligned_cols=169 Identities=17% Similarity=0.227 Sum_probs=135.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-CeEEecCCCccccCCCCCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDGKSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-~~kl~dfg~~~~~~~~~~~~ 79 (357)
++||+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++ .++|+|||++..........
T Consensus 91 ~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 167 (267)
T PHA03390 91 IKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYD 167 (267)
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCC
Confidence 478999999963 348999999999999999999999999 99999999999999888 99999999988776666667
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
++..|+|||++.+..++.++|+||||+++++|++|..|+................... ....+...++.+.+++.+||
T Consensus 168 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l 245 (267)
T PHA03390 168 GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK--KLPFIKNVSKNANDFVQSML 245 (267)
T ss_pred CCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc--cCCcccccCHHHHHHHHHHh
Confidence 8999999999998888999999999999999999998876432211110011000010 11222345678999999999
Q ss_pred hcCCCCCCC-hhhHHH
Q 018348 160 QYEPRERPN-PKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rps-~~~i~~ 174 (357)
+.+|.+||+ +.+++.
T Consensus 246 ~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 246 KYNINYRLTNYNEIIK 261 (267)
T ss_pred ccChhhCCchHHHHhc
Confidence 999999995 688774
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-28 Score=211.43 Aligned_cols=170 Identities=27% Similarity=0.411 Sum_probs=134.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++++|.+++.. ....+++..+..++.+++.+|.|||+++ ++||||+|+||+++.++.++|+|||++........
T Consensus 74 ~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 151 (251)
T cd05041 74 VPGGSLLTFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS 151 (251)
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceec
Confidence 468999999964 3457899999999999999999999999 99999999999999999999999999876542211
Q ss_pred ---ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 78 ---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 78 ---~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...+..|+|||.+.++.++.++|+||||+++|+|++ |..|+.............. ......+...+..+.+
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 226 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES-----GYRMPAPQLCPEEIYR 226 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-----CCCCCCCccCCHHHHH
Confidence 123456999999988889999999999999999998 6666654432222111111 1112234455678999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhc
Q 018348 154 LASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
++.+||+.+|++||++.+++..|+
T Consensus 227 li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 227 LMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHhccChhhCcCHHHHHHHhh
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-28 Score=218.83 Aligned_cols=171 Identities=19% Similarity=0.347 Sum_probs=134.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~ 77 (357)
++||+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 47899999996544567999999999999999999999999 9999999999999999999999999987654332 2
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
..|+..|+|||++.+..++.++||||||+++|+|++|..||......... ........ ......+..+++.+.+++.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVK-EVQEEYSEKFSPDARSLCKM 238 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhhh-hhhhhcCccCCHHHHHHHHH
Confidence 46889999999999888999999999999999999999888643211000 00001100 01112344456789999999
Q ss_pred hhhcCCCCCCC-----hhhHHH
Q 018348 158 CLQYEPRERPN-----PKSLVT 174 (357)
Q Consensus 158 cl~~~p~~Rps-----~~~i~~ 174 (357)
||+.||++||| +.+++.
T Consensus 239 ~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 239 LLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HhhcCHHHccCCCCCchHHHHc
Confidence 99999999999 666665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-28 Score=217.11 Aligned_cols=167 Identities=19% Similarity=0.312 Sum_probs=131.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
+++|+|.+++......++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 47899999987544567999999999999999999999999 999999999999999999999999988654432 23
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
..|+..|+|||++.+..++.++|+||||+++|+|++|..||...............+... ...++...+..+.+++.+
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~ 238 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET--EEVYSAKFSEEAKSICKM 238 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--ccccCccCCHHHHHHHHH
Confidence 467899999999988889999999999999999999998886543221111111111111 112334455788999999
Q ss_pred hhhcCCCCCCChh
Q 018348 158 CLQYEPRERPNPK 170 (357)
Q Consensus 158 cl~~~p~~Rps~~ 170 (357)
||+.||++||++.
T Consensus 239 ~l~~~P~~R~~~~ 251 (285)
T cd05632 239 LLTKDPKQRLGCQ 251 (285)
T ss_pred HccCCHhHcCCCc
Confidence 9999999999943
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=214.69 Aligned_cols=168 Identities=23% Similarity=0.339 Sum_probs=129.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-------CeEEecCCCccccC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-------NPRLSTFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-------~~kl~dfg~~~~~~ 73 (357)
++||+|.+++.. ..+.+++..+..++.|++.||.|||+++ ++||||||+||+++..+ .++++|||++....
T Consensus 98 ~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~ 175 (274)
T cd05076 98 VEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTAL 175 (274)
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCccceeeecCCccccccc
Confidence 578999999853 3567899999999999999999999999 99999999999997543 37999999876554
Q ss_pred CCCCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHH-cCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 74 DGKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLL-SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 74 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
......++..|++||.+.+ ..++.++||||||+++|||+ +|..|+........... ... ....+....+.+
T Consensus 176 ~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~------~~~~~~~~~~~~ 248 (274)
T cd05076 176 SREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-YEK------KHRLPEPSCKEL 248 (274)
T ss_pred cccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-HHh------ccCCCCCCChHH
Confidence 4444567888999998875 45789999999999999995 67766654322211110 000 011122234578
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
.+++.+||+.+|++|||+.+|+..|.
T Consensus 249 ~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 249 ATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHHHHcccChhhCcCHHHHHHhhC
Confidence 99999999999999999999998773
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-28 Score=213.67 Aligned_cols=176 Identities=18% Similarity=0.265 Sum_probs=137.9
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-- 76 (357)
+++|+|.+++... ....+++..+..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~ 162 (267)
T cd08224 84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCCcc
Confidence 4789999998542 2456899999999999999999999999 9999999999999999999999999887654322
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCc-hhHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD-DDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ 153 (357)
...++..|+|||.+.+..++.++|+||||+++|+|++|..|+......... ......... ....+. ..+..+.+
T Consensus 163 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~ 239 (267)
T cd08224 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS--LCKKIEKCD-YPPLPADHYSEELRD 239 (267)
T ss_pred cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHH--HHhhhhcCC-CCCCChhhcCHHHHH
Confidence 345788899999998888899999999999999999999887543211100 000000000 111122 44568999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
++.+||..+|++|||+.+|++.|+.+.
T Consensus 240 ~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 240 LVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=225.84 Aligned_cols=168 Identities=17% Similarity=0.179 Sum_probs=129.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++..+..|+.|++.||.|||+.+ ++||||||+|||++.+|.++|+|||+++.....
T Consensus 83 ~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (364)
T cd05599 83 LPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF 159 (364)
T ss_pred CCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceeccccccccc
Confidence 47899999996 3567999999999999999999999999 999999999999999999999999987643211
Q ss_pred -------------------------------------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCC
Q 018348 76 -------------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118 (357)
Q Consensus 76 -------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~ 118 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf 239 (364)
T cd05599 160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPF 239 (364)
T ss_pred cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCC
Confidence 0235899999999998888999999999999999999999988
Q ss_pred CcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCC---hhhHHH
Q 018348 119 PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 174 (357)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps---~~~i~~ 174 (357)
................. ..........++.+.+++.+|+. +|.+|++ +.+++.
T Consensus 240 ~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 240 CSDNPQETYRKIINWKE--TLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCHHHHHHHHHcCCC--ccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 65433222111111100 00111111345788999999996 9999998 666654
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-28 Score=210.19 Aligned_cols=170 Identities=25% Similarity=0.403 Sum_probs=134.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..+..++.+++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 74 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 151 (250)
T cd05085 74 VPGGDFLSFLRK-KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSS 151 (250)
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccC
Confidence 478999999853 3457899999999999999999999999 9999999999999999999999999886543321
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||++.++.++.++||||||+++|++++ |..|+............... .....+..++..+.++
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 226 (250)
T cd05085 152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG-----YRMSCPQKCPDDVYKV 226 (250)
T ss_pred CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHH
Confidence 1223567999999988888999999999999999998 87777554332221111111 1122334456889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+.+||+.+|++||++.++...|.
T Consensus 227 i~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 227 MQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHcccCcccCCCHHHHHHHhc
Confidence 99999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-28 Score=226.92 Aligned_cols=158 Identities=21% Similarity=0.344 Sum_probs=133.4
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC----CCCC
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~----~~~~ 77 (357)
.||++.-++ ..+.+++..+.-++..|+.||.|||+++ ||+||||.+|||+|.+|.+||+|||+++... ...+
T Consensus 452 ~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsT 527 (694)
T KOG0694|consen 452 AGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTST 527 (694)
T ss_pred CCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCCCCCcccc
Confidence 467743333 5689999999999999999999999999 9999999999999999999999999998644 2346
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
++||+.|||||++.+..|+...|.|||||++|||+.|+.||+++..+.+-...... ...+|.-++.+...|+++
T Consensus 528 fCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d------~~~yP~~ls~ea~~il~~ 601 (694)
T KOG0694|consen 528 FCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSKEAIAIMRR 601 (694)
T ss_pred ccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CCCCCCcccHHHHHHHHH
Confidence 78999999999999999999999999999999999999999876444332222111 235677788999999999
Q ss_pred hhhcCCCCCCCh
Q 018348 158 CLQYEPRERPNP 169 (357)
Q Consensus 158 cl~~~p~~Rps~ 169 (357)
+|..+|++|..+
T Consensus 602 ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 602 LLRKNPEKRLGS 613 (694)
T ss_pred HhccCcccccCC
Confidence 999999999765
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=231.17 Aligned_cols=170 Identities=24% Similarity=0.337 Sum_probs=128.6
Q ss_pred ccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-CeEEecCCCccccCCC---CC
Q 018348 4 ETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 4 gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-~~kl~dfg~~~~~~~~---~~ 77 (357)
|+|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++..... ..
T Consensus 151 ~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~ 229 (440)
T PTZ00036 151 QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVS 229 (440)
T ss_pred ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccchhccCCCCccc
Confidence 5676666422 3567999999999999999999999999 99999999999998654 7999999999865433 24
Q ss_pred ccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-----------------------c
Q 018348 78 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------------------M 133 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-----------------------~ 133 (357)
..||+.|+|||++.+. .++.++|||||||++|||++|..||.............. .
T Consensus 230 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~ 309 (440)
T PTZ00036 230 YICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPD 309 (440)
T ss_pred CCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCc
Confidence 5689999999998764 689999999999999999999988865422111000000 0
Q ss_pred cccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+....+...+|...+.++.+|+.+||+.||.+|||+.+++.
T Consensus 310 ~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 310 VKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred cCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00011111233345578999999999999999999999875
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-28 Score=225.43 Aligned_cols=169 Identities=18% Similarity=0.239 Sum_probs=127.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----CC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 77 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-----~~ 77 (357)
+++|.+++. ..+.+++..++.|+.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 166 ~~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~ 242 (391)
T PHA03212 166 KTDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYG 242 (391)
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCccccccccccccccc
Confidence 467888885 3467899999999999999999999999 999999999999999999999999998653221 23
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh--------HHhh---h--c------------ccc
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--------DLIR---D--R------------NLQ 132 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~--------~~~~---~--~------------~~~ 132 (357)
..||+.|+|||++.+..++.++|||||||++|||++|..|+..... ..+. . + ...
T Consensus 243 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~ 322 (391)
T PHA03212 243 WAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD 322 (391)
T ss_pred ccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence 4689999999999988899999999999999999999876532110 0000 0 0 000
Q ss_pred --------c-cccccccCCC--CchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 133 --------M-LTDSCLEGQF--TDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 133 --------~-~~~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
. ...+...... ....+.++.+++.+||+.||.+|||+.+++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 0000000000 0123567899999999999999999999985
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=218.22 Aligned_cols=167 Identities=19% Similarity=0.241 Sum_probs=133.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++. ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 99 ~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (296)
T cd06654 99 LAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (296)
T ss_pred cCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhccccccccC
Confidence 47899999984 456899999999999999999999999 9999999999999999999999999877644322
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|+|||.+.+...+.++|||||||++|+|++|..||.............. ........+...+..+.+++.
T Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~ 251 (296)
T cd06654 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFLN 251 (296)
T ss_pred cccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc---CCCCCCCCccccCHHHHHHHH
Confidence 34678899999999888889999999999999999999998865432111100000 000111123345578999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||..+|++||++.+|+.
T Consensus 252 ~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 252 RCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHCcCCcccCcCHHHHhh
Confidence 999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-28 Score=224.60 Aligned_cols=169 Identities=17% Similarity=0.169 Sum_probs=132.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ...++...+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 125 ~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~ 200 (370)
T cd05596 125 MPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRC 200 (370)
T ss_pred CCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccC
Confidence 57999999994 346888999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCCCCchhhhcCC----CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~----~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
....||+.|+|||++.+. .++.++|||||||++|||++|..||.................. .........+..+
T Consensus 201 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~ 278 (370)
T cd05596 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS--LTFPDDIEISKQA 278 (370)
T ss_pred CCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc--CCCCCcCCCCHHH
Confidence 234689999999998753 3788999999999999999999998765433222211111000 1111112346789
Q ss_pred HHHHHHhhhcCCCC--CCChhhHHHH
Q 018348 152 VRLASRCLQYEPRE--RPNPKSLVTA 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~--Rps~~~i~~~ 175 (357)
.+++++||+.+|.+ |+++.+++..
T Consensus 279 ~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 279 KDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HHHHHHHccChhhccCCCCHHHHhcC
Confidence 99999999999987 9999998764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=224.38 Aligned_cols=169 Identities=17% Similarity=0.199 Sum_probs=131.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~ 160 (330)
T cd05601 83 QPGGDLLSLLNR-YEDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS 160 (330)
T ss_pred CCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence 479999999964 3468999999999999999999999999 9999999999999999999999999987654332
Q ss_pred -CccCCCCCCchhhhc------CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHH
Q 018348 77 -SYSTNLAFTPPEYLR------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~------~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
...||..|+|||++. ...++.++|||||||++|+|++|..||................. ..........+.
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~ 238 (330)
T cd05601 161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR--FLKFPEDPKVSS 238 (330)
T ss_pred ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC--ccCCCCCCCCCH
Confidence 235899999999986 34577899999999999999999998865433222111111100 001111123457
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+.+++++||. +|.+||++.+++.
T Consensus 239 ~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 239 DFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 89999999998 9999999999875
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=212.44 Aligned_cols=170 Identities=24% Similarity=0.342 Sum_probs=132.8
Q ss_pred ccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC-CCeEEecCCCccccCCCC---C
Q 018348 4 ETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDGK---S 77 (357)
Q Consensus 4 gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~-~~~kl~dfg~~~~~~~~~---~ 77 (357)
.||.+++.+. .+..++.-.+.-+..||++||.|||+.+ |+||||||.|+|+|.+ |.+||||||.++....+. +
T Consensus 106 ~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniS 184 (364)
T KOG0658|consen 106 ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNIS 184 (364)
T ss_pred HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCcee
Confidence 3677777532 3567888888999999999999999999 9999999999999965 999999999999876554 4
Q ss_pred ccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchh----------------HHhhhcccc-------c
Q 018348 78 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL----------------DLIRDRNLQ-------M 133 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~----------------~~~~~~~~~-------~ 133 (357)
...|+.|.|||.+.+. .|+.+.||||.|||+.||+-|++.|++... +.+...... .
T Consensus 185 YicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ 264 (364)
T KOG0658|consen 185 YICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQ 264 (364)
T ss_pred EEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcc
Confidence 5679999999999985 589999999999999999999998877421 122222211 1
Q ss_pred cccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+.............+++..+++.++|+.+|.+|.++.+++.
T Consensus 265 ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 265 IKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11111111134456789999999999999999999988875
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=217.53 Aligned_cols=167 Identities=20% Similarity=0.285 Sum_probs=139.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~ 77 (357)
|.||+|.=+|....+..+++..++.++.+|+.||++||... ||.||+||+|||+|++|.+.|+|.|++..++... .
T Consensus 267 MNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~ 345 (591)
T KOG0986|consen 267 MNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRG 345 (591)
T ss_pred ecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccceEEecCCCCcccc
Confidence 78999999998766779999999999999999999999999 9999999999999999999999999999887764 3
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
.+||.+|||||++.++.|+...|.|||||++|||+.|+.||.......-.+..-+.+.. ....++...+++..+|.+.
T Consensus 346 rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~--~~~ey~~kFS~eakslc~~ 423 (591)
T KOG0986|consen 346 RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE--DPEEYSDKFSEEAKSLCEG 423 (591)
T ss_pred ccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc--chhhcccccCHHHHHHHHH
Confidence 47899999999999999999999999999999999999998654221111111111111 1345677788999999999
Q ss_pred hhhcCCCCCCChh
Q 018348 158 CLQYEPRERPNPK 170 (357)
Q Consensus 158 cl~~~p~~Rps~~ 170 (357)
.|+.||++|...+
T Consensus 424 LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 424 LLTKDPEKRLGCR 436 (591)
T ss_pred HHccCHHHhccCC
Confidence 9999999996654
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=225.03 Aligned_cols=161 Identities=20% Similarity=0.222 Sum_probs=127.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. +.+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 78 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 78 MSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred CCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 47899999986 4567999999999999999999999999 999999999999999999999999998653221 2
Q ss_pred CccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCC-chhHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-DDDGTELVRL 154 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l 154 (357)
...||..|+|||++.+. .++.++|||||||++|+|++|..||................ ...+ ...+..+.++
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~~l 228 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGK------VRFPKNVLSDEGRQF 228 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCC------CCCCCccCCHHHHHH
Confidence 35689999999998764 47899999999999999999999886643322211111110 0111 1245788999
Q ss_pred HHHhhhcCCCCCCChh
Q 018348 155 ASRCLQYEPRERPNPK 170 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~ 170 (357)
+.+||+.||.+||+..
T Consensus 229 i~~~L~~~P~~R~~~~ 244 (330)
T cd05586 229 VKGLLNRNPQHRLGAH 244 (330)
T ss_pred HHHHcCCCHHHCCCCC
Confidence 9999999999999654
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=215.13 Aligned_cols=176 Identities=17% Similarity=0.241 Sum_probs=131.8
Q ss_pred CCCccHHhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccc
Q 018348 1 MPNETLAKHLFHWE---------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 71 (357)
Q Consensus 1 ~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~ 71 (357)
+++|+|.+++.... ...+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 179 (296)
T cd05095 101 MENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNYTIKIADFGMSRN 179 (296)
T ss_pred CCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEcCCCCEEeccCccccc
Confidence 46899999996432 134788899999999999999999999 99999999999999999999999999876
Q ss_pred cCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc--CCCCCCcchhHHhhhcccc--ccccccccC
Q 018348 72 SRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRDRNLQ--MLTDSCLEG 141 (357)
Q Consensus 72 ~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~--g~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 141 (357)
..... ...++..|++||...++.++.++|+||||+++|||++ |..|+.............. .........
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (296)
T cd05095 180 LYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYL 259 (296)
T ss_pred ccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccC
Confidence 53322 1233568999999888889999999999999999998 5555543222111110000 000000011
Q ss_pred CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 142 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
..+..++..+.+++.+||+.||.+||++.+|.+.|+
T Consensus 260 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 260 PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 123345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-28 Score=212.90 Aligned_cols=172 Identities=22% Similarity=0.279 Sum_probs=134.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ..+.+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++++|||++........
T Consensus 87 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 164 (269)
T cd05065 87 MENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 164 (269)
T ss_pred CCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCccccc
Confidence 468999999964 3467899999999999999999999999 99999999999999999999999998765433211
Q ss_pred c---c-C--CCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 78 Y---S-T--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 78 ~---~-g--t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
. . + +..|++||.+.+..++.++||||||+++||+++ |..|+............... .....+..++..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~ 239 (269)
T cd05065 165 YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-----YRLPPPMDCPTA 239 (269)
T ss_pred cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CcCCCcccCCHH
Confidence 1 1 1 346999999988889999999999999999886 88777543322211111111 111223455678
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+.+++.+||..+|++||++.+|+..|+.+
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 240 LHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 99999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=211.02 Aligned_cols=175 Identities=13% Similarity=0.155 Sum_probs=126.6
Q ss_pred CCCccHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----
Q 018348 1 MPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~---- 74 (357)
+++|+|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++.....
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence 47899999996432 245677788899999999999999999 99999999999999999999999998754221
Q ss_pred --CCCccCCCCCCchhhhcC-------CCCCCcccchhHHHHHHHHHcCC-CCCCcchhHHhhhccccccccccccCCCC
Q 018348 75 --GKSYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFT 144 (357)
Q Consensus 75 --~~~~~gt~~y~aPE~~~~-------~~~~~~~Di~slG~vl~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (357)
.....++..|+|||++.. ..++.++||||||+++|||+++. .|+......................+..+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE 235 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC
Confidence 123457789999998753 23577999999999999999754 45433221111111111100011112223
Q ss_pred chhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 145 DDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 145 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
......+.+++..|| .+|++||++.+|+..|.
T Consensus 236 ~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 236 LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 335578889999999 67999999999998774
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-28 Score=212.33 Aligned_cols=172 Identities=18% Similarity=0.225 Sum_probs=136.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 80 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~g 80 (357)
++||+|.+++. ..+++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++.........+
T Consensus 79 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (260)
T cd05611 79 LNGGDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVG 155 (260)
T ss_pred cCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCC
Confidence 47899999995 3467899999999999999999999999 99999999999999999999999999877655556678
Q ss_pred CCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhh
Q 018348 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 160 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 160 (357)
+..|++||.+.+..++.++||||||+++|+|++|..|+................. .........++..+.+++.+||+
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~ 233 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRI--NWPEEVKEFCSPEAVDLINRLLC 233 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--CCCCcccccCCHHHHHHHHHHcc
Confidence 8999999999887789999999999999999999988765433222111111100 01111222456789999999999
Q ss_pred cCCCCCCChhhHHHHhc
Q 018348 161 YEPRERPNPKSLVTALS 177 (357)
Q Consensus 161 ~~p~~Rps~~~i~~~L~ 177 (357)
.+|++||++..+.+.|.
T Consensus 234 ~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 234 MDPAKRLGANGYQEIKS 250 (260)
T ss_pred CCHHHccCCCcHHHHHc
Confidence 99999998876666553
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=217.12 Aligned_cols=170 Identities=19% Similarity=0.293 Sum_probs=128.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
.|+|.+++.. .+..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ...
T Consensus 86 ~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~ 163 (288)
T cd07871 86 DSDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNE 163 (288)
T ss_pred CcCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCc
Confidence 3588888853 3456899999999999999999999999 999999999999999999999999998754322 234
Q ss_pred cCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc--------------------cccccc
Q 018348 79 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------QMLTDS 137 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~--------------------~~~~~~ 137 (357)
.++..|+|||++.+ ..++.++||||+||++|+|++|+.||............. .....+
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (288)
T cd07871 164 VVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFP 243 (288)
T ss_pred eecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccC
Confidence 57889999999875 457899999999999999999998886543211110000 000000
Q ss_pred cccC----CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 138 CLEG----QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 138 ~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.... ...+..+.+..+++.+||+.||.+|||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 244 QYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred ccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000 011234567899999999999999999999874
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=216.25 Aligned_cols=177 Identities=23% Similarity=0.342 Sum_probs=136.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+........
T Consensus 90 ~~~~~l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 167 (284)
T cd05038 90 LPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYY 167 (284)
T ss_pred CCCCCHHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccccccccccCCccee
Confidence 368999999963 2346999999999999999999999999 99999999999999999999999999877653221
Q ss_pred ----ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh----------hccccccccccccCCC
Q 018348 78 ----YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNLQMLTDSCLEGQF 143 (357)
Q Consensus 78 ----~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 143 (357)
..++..|++||.+.+..++.++||||||+++++|++|..|+......... ................
T Consensus 168 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (284)
T cd05038 168 VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPR 247 (284)
T ss_pred ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCC
Confidence 12345699999998888999999999999999999999776432211100 0000000001111122
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+..++..+.+++.+||+.+|++||++.+|+..|+.+
T Consensus 248 ~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 248 PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 334557899999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=210.28 Aligned_cols=169 Identities=20% Similarity=0.258 Sum_probs=136.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++....+..+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 47899999997544567999999999999999999999999 9999999999999999999999999887654432
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|+|||.+.+...+.++|+||||+++++|++|..|+................. ...+..++..+.+++.
T Consensus 160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~ 234 (256)
T cd08221 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY-----TPVVSVYSSELISLVH 234 (256)
T ss_pred ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-----CCCccccCHHHHHHHH
Confidence 34578999999999887788999999999999999999988765433222111111111 1112345578999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+||..+|++|||+.+++..
T Consensus 235 ~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 235 SLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHcccCcccCCCHHHHhhC
Confidence 9999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=198.36 Aligned_cols=166 Identities=22% Similarity=0.284 Sum_probs=142.2
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC--CCCcc
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYS 79 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~--~~~~~ 79 (357)
++|+|...|.....+.+++.....++.|++.||.|+|.++ ||||||||+|+|++..|.+|++|||-+...+. ..+.+
T Consensus 105 ~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlc 183 (281)
T KOG0580|consen 105 PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLC 183 (281)
T ss_pred CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeee
Confidence 5799999998767788999999999999999999999999 99999999999999999999999998776543 35778
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
||.-|++||...+...+...|+|++|+++||++.|.+||..........+.... .-.+|..++....++|.+|+
T Consensus 184 gt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~------~~~~p~~is~~a~dlI~~ll 257 (281)
T KOG0580|consen 184 GTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV------DLKFPSTISGGAADLISRLL 257 (281)
T ss_pred cccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc------cccCCcccChhHHHHHHHHh
Confidence 999999999999999999999999999999999999998766544433332221 12334556688999999999
Q ss_pred hcCCCCCCChhhHHH
Q 018348 160 QYEPRERPNPKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rps~~~i~~ 174 (357)
..+|.+|.+..+++.
T Consensus 258 ~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 258 VKNPIERLALTEVMD 272 (281)
T ss_pred ccCccccccHHHHhh
Confidence 999999999999876
|
|
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=213.41 Aligned_cols=169 Identities=12% Similarity=0.147 Sum_probs=131.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++....+..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 101 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 179 (282)
T cd06636 101 CGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 179 (282)
T ss_pred CCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCC
Confidence 46889999997555667899999999999999999999999 999999999999999999999999987754321 2
Q ss_pred CccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...|+..|+|||.+.. ..++.++|+||||+++|+|++|..|+........... .............++..+
T Consensus 180 ~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 255 (282)
T cd06636 180 TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL----IPRNPPPKLKSKKWSKKF 255 (282)
T ss_pred cccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh----HhhCCCCCCcccccCHHH
Confidence 3467889999999863 3578899999999999999999988754322111110 011111111122355789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.++|.+||+.||.+||++.+|+.
T Consensus 256 ~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 256 IDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HHHHHHHhCCChhhCcCHHHHhc
Confidence 99999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=222.17 Aligned_cols=169 Identities=18% Similarity=0.170 Sum_probs=128.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.+...
T Consensus 83 ~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 159 (377)
T cd05629 83 LPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY 159 (377)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 47999999996 3567999999999999999999999999 999999999999999999999999988532110
Q ss_pred ----------------------------------------------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHH
Q 018348 76 ----------------------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLL 109 (357)
Q Consensus 76 ----------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~ 109 (357)
....||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (377)
T cd05629 160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMF 239 (377)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhh
Confidence 0235899999999998888999999999999999
Q ss_pred HHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCC---CChhhHHHH
Q 018348 110 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER---PNPKSLVTA 175 (357)
Q Consensus 110 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R---ps~~~i~~~ 175 (357)
||++|..||.................. ...+.....+..+.+++.+|+. +|.+| +++.+++..
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 240 ECLIGWPPFCSENSHETYRKIINWRET--LYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhcCCCCCCCCCHHHHHHHHHccCCc--cCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999988654332211111110000 0001111245788999999997 77766 577777653
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=212.55 Aligned_cols=174 Identities=17% Similarity=0.208 Sum_probs=138.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.......
T Consensus 90 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 167 (279)
T cd05057 90 MPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYH 167 (279)
T ss_pred CCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCccccee
Confidence 478999999964 3456999999999999999999999998 99999999999999999999999999876543321
Q ss_pred ---ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 78 ---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 78 ---~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
..++..|++||.+....++.++|+||||+++||+++ |..|+............... .....+..++..+.+
T Consensus 168 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 242 (279)
T cd05057 168 AEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-----ERLPQPPICTIDVYM 242 (279)
T ss_pred cCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-----CCCCCCCCCCHHHHH
Confidence 112467999999988888999999999999999998 88887654333222211111 111223345578899
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
++.+||..+|++||++.+++..|..+..
T Consensus 243 ~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 243 VLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999988744
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=212.17 Aligned_cols=171 Identities=19% Similarity=0.209 Sum_probs=130.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++. ..+++++..+..++.|++.||.|||+.+ ++||||+|.||+++.++.++|+|||++...... .
T Consensus 88 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 88 CGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 47899999986 3567899999999999999999999999 999999999999999999999999998765322 2
Q ss_pred CccCCCCCCchhhhcC---CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-ccccccccccCCCCchhHHHHH
Q 018348 77 SYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-LQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...++..|+|||.+.. ..++.++|+||||+++|+|++|+.|+............ ......+.. ......+..+.
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 242 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKL--KDKTKWSSTFH 242 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCC--ccccccCHHHH
Confidence 3457889999998853 44788999999999999999999876432211110000 001111111 11223457899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHh
Q 018348 153 RLASRCLQYEPRERPNPKSLVTAL 176 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L 176 (357)
+++++||+.+|++||++.+|+..|
T Consensus 243 ~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 243 NFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHhhCChhhCcCHHHHhcCC
Confidence 999999999999999999988754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-28 Score=217.21 Aligned_cols=170 Identities=16% Similarity=0.218 Sum_probs=125.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
+++|.+++.. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ...
T Consensus 86 ~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 163 (303)
T cd07869 86 HTDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNE 163 (303)
T ss_pred CcCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCC
Confidence 4678888753 3467899999999999999999999999 999999999999999999999999988654322 234
Q ss_pred cCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhH--Hhhhc-------c---cc------ccccccc
Q 018348 79 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDR-------N---LQ------MLTDSCL 139 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~--~~~~~-------~---~~------~~~~~~~ 139 (357)
.+|+.|+|||++.+ ..++.++|||||||++|+|++|..||...... ..... . .. .......
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (303)
T cd07869 164 VVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERF 243 (303)
T ss_pred cccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccc
Confidence 57899999999875 35788999999999999999999988653111 00000 0 00 0000000
Q ss_pred cCCCC---------chhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 140 EGQFT---------DDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 140 ~~~~~---------~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....+ ...+..+.+++.+||+.||.+|||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 244 TLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000 012356789999999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=224.05 Aligned_cols=166 Identities=17% Similarity=0.210 Sum_probs=124.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+.. ..++..+..|+.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... .
T Consensus 154 ~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 226 (353)
T PLN00034 154 MDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCN 226 (353)
T ss_pred CCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceeccccccccc
Confidence 3566665432 4567788899999999999999999 999999999999999999999999998765432 2
Q ss_pred CccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...||..|+|||++.. ...+.++|||||||++|||++|+.||.......+........ .......+..++..+
T Consensus 227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 304 (353)
T PLN00034 227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC--MSQPPEAPATASREF 304 (353)
T ss_pred ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh--ccCCCCCCCccCHHH
Confidence 4568999999998853 224568999999999999999998886322111110000000 001122334456789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
.++|.+||+.||++||++.+++..
T Consensus 305 ~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 305 RHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHHHHHccCChhhCcCHHHHhcC
Confidence 999999999999999999999874
|
|
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=213.57 Aligned_cols=174 Identities=19% Similarity=0.265 Sum_probs=134.3
Q ss_pred CCCccHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++..
T Consensus 91 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~~~~~ 169 (288)
T cd05061 91 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDI 169 (288)
T ss_pred CCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCccccc
Confidence 47899999996422 134577889999999999999999999 999999999999999999999999998754
Q ss_pred CCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCc
Q 018348 73 RDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145 (357)
Q Consensus 73 ~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
.... ...++..|++||.+.++.++.++|+||||+++|||++ |..|+............... .....+.
T Consensus 170 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~ 244 (288)
T cd05061 170 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-----GYLDQPD 244 (288)
T ss_pred cccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCC
Confidence 3221 2234667999999988889999999999999999998 56666543322221111100 0112233
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
.+++.+.+++.+||+.+|++|||+.++++.|....
T Consensus 245 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 245 NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 44578999999999999999999999999887753
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=214.85 Aligned_cols=176 Identities=18% Similarity=0.227 Sum_probs=131.2
Q ss_pred CCCccHHhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCcc
Q 018348 1 MPNETLAKHLFHWE----------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 70 (357)
Q Consensus 1 ~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~ 70 (357)
++|++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.
T Consensus 99 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~~~~~kl~dfg~~~ 177 (295)
T cd05097 99 MENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNHYTIKIADFGMSR 177 (295)
T ss_pred CCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcCCCcEEeccccccc
Confidence 47899999985421 124788999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcC--CCCCCcchhHHhhhcccc--cccccccc
Q 018348 71 NSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG--KHIPPSHALDLIRDRNLQ--MLTDSCLE 140 (357)
Q Consensus 71 ~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g--~~~~~~~~~~~~~~~~~~--~~~~~~~~ 140 (357)
...... ...++..|+|||.+..+.++.++|+||||+++++|+++ ..|+.............. ........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (295)
T cd05097 178 NLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIY 257 (295)
T ss_pred ccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhcccccc
Confidence 543321 12346689999999888899999999999999999984 444433222111110000 00000011
Q ss_pred CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 141 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
...+..+++.+.+++.+||+.+|++|||+.+|++.|.
T Consensus 258 ~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 258 LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1123345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-28 Score=218.41 Aligned_cols=168 Identities=19% Similarity=0.213 Sum_probs=135.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC-------
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR------- 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~------- 73 (357)
+|||++..+|. +.+.|++..+..++.+++.||.-+|..| +|||||||+|+|||..|.+||+|||++.-..
T Consensus 223 lPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~ 299 (550)
T KOG0605|consen 223 LPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIES 299 (550)
T ss_pred cCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhhhhhhh
Confidence 59999999997 5789999999999999999999999999 9999999999999999999999999875210
Q ss_pred -------------------C-----CC--------------------CccCCCCCCchhhhcCCCCCCcccchhHHHHHH
Q 018348 74 -------------------D-----GK--------------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLL 109 (357)
Q Consensus 74 -------------------~-----~~--------------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~ 109 (357)
. .. +.+||+-|||||++.+..++..+|.||||||+|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Imy 379 (550)
T KOG0605|consen 300 YRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMY 379 (550)
T ss_pred hcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHH
Confidence 0 00 135899999999999989999999999999999
Q ss_pred HHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCC---hhhHHH
Q 018348 110 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 174 (357)
Q Consensus 110 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps---~~~i~~ 174 (357)
||+.|-+||..+.....-......-.. +.-+....+..+..+||.+|+. ||++|.. +.||..
T Consensus 380 EmLvGyPPF~s~tp~~T~rkI~nwr~~--l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 380 EMLVGYPPFCSETPQETYRKIVNWRET--LKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhhh--ccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 999999999887665544333332111 1112223345789999999998 9999954 556654
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=222.79 Aligned_cols=170 Identities=20% Similarity=0.228 Sum_probs=129.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC------
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~------ 74 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 83 ~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 83 IPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 47999999996 3567999999999999999999999999 99999999999999999999999998653210
Q ss_pred ---------------------------------------------CCCccCCCCCCchhhhcCCCCCCcccchhHHHHHH
Q 018348 75 ---------------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLL 109 (357)
Q Consensus 75 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~ 109 (357)
..+..||..|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILF 239 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHH
Confidence 01246899999999998888999999999999999
Q ss_pred HHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH--hhhcCCCCCCChhhHHHH
Q 018348 110 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR--CLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 110 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~~p~~Rps~~~i~~~ 175 (357)
||++|..||.................. ........+++++.+++.+ |+..+|..||++.+++..
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKVINWENT--LHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHccccc--cCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 999999988654332211111110000 1111112345778889988 556666679999999863
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=223.48 Aligned_cols=168 Identities=14% Similarity=0.178 Sum_probs=128.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. +.+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.+|.++|+|||+++.....
T Consensus 83 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~ 159 (360)
T cd05627 83 LPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF 159 (360)
T ss_pred CCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCccccccccccc
Confidence 57999999996 4567999999999999999999999999 999999999999999999999999987643211
Q ss_pred ----------------------------------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcc
Q 018348 76 ----------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 121 (357)
Q Consensus 76 ----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~ 121 (357)
....||..|+|||++.+..++.++|||||||++|||++|..||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~ 239 (360)
T cd05627 160 YRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (360)
T ss_pred ccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCC
Confidence 1236899999999999888999999999999999999999988665
Q ss_pred hhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 122 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..................+. ....+..+.++|.+|+. ||.+|++...+.+
T Consensus 240 ~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~~-~p~~R~~~~~~~e 289 (360)
T cd05627 240 TPQETYRKVMNWKETLVFPP--EVPISEKAKDLILRFCT-DSENRIGSNGVEE 289 (360)
T ss_pred CHHHHHHHHHcCCCceecCC--CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHH
Confidence 43322221111100001111 11245678889988774 9999986443433
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=211.72 Aligned_cols=166 Identities=20% Similarity=0.360 Sum_probs=133.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++++|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||.++.....
T Consensus 88 ~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06628 88 VPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTK 164 (267)
T ss_pred cCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCcccccccccCC
Confidence 46899999996 3467899999999999999999999999 999999999999999999999999988765421
Q ss_pred -----CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 76 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 76 -----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
....|+..|++||.+.+..++.++|+||||+++|+|++|..|+........... ... ......+...+..
T Consensus 165 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~ 239 (267)
T cd06628 165 TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFK-IGE----NASPEIPSNISSE 239 (267)
T ss_pred ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHH-Hhc----cCCCcCCcccCHH
Confidence 123467889999999888889999999999999999999988765322111000 001 1112234445678
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHH
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+++++||+.+|.+||++.+|+.
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 240 AIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHHHHHHHccCCchhCcCHHHHhh
Confidence 999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-28 Score=221.42 Aligned_cols=167 Identities=16% Similarity=0.245 Sum_probs=126.1
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCccC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~g 80 (357)
++|.+.+. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....|
T Consensus 106 ~~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 180 (355)
T cd07874 106 ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 180 (355)
T ss_pred ccHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccc
Confidence 45555552 35888999999999999999999999 999999999999999999999999998765443 23468
Q ss_pred CCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc----------------------------
Q 018348 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ---------------------------- 132 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~---------------------------- 132 (357)
|..|+|||++.+..++.++|||||||++|+|++|+.||..............
T Consensus 181 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (355)
T cd07874 181 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA 260 (355)
T ss_pred cCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccc
Confidence 9999999999988899999999999999999999988865321110000000
Q ss_pred ccc------cccc--cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 133 MLT------DSCL--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 133 ~~~------~~~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
... +... ....+......+.+++.+||+.||++|||+.+++..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 261 GLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred cccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000 0000 001112234578999999999999999999999873
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=212.42 Aligned_cols=169 Identities=16% Similarity=0.189 Sum_probs=130.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.. ..+++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (282)
T cd06643 84 CAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 161 (282)
T ss_pred cCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEccccccccccccccccc
Confidence 468899988853 3568999999999999999999999999 999999999999999999999999988654322 2
Q ss_pred CccCCCCCCchhhhc-----CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...++..|+|||++. +..++.++|+|||||++|+|++|+.|+................ .+ ....+..++..+
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~ 238 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE-PP--TLAQPSRWSSEF 238 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC-CC--CCCCccccCHHH
Confidence 345789999999984 2346789999999999999999998875432211111111110 00 111233455789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+||+.+|.+||++.+++.
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 239 KDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHHHHccCChhhCcCHHHHhc
Confidence 99999999999999999998875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=211.53 Aligned_cols=174 Identities=22% Similarity=0.284 Sum_probs=137.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++.+++.++.+++.||.|||+.+ ++|+||||+||+++.++.++++|||+++......
T Consensus 88 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 165 (270)
T cd05056 88 APLGELRSYLQV-NKYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKA 165 (270)
T ss_pred CCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeecccccceec
Confidence 468999999963 3446899999999999999999999999 9999999999999999999999999987654332
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||.+....++.++||||||++++++++ |..||............... .....+..++..+.++
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 240 (270)
T cd05056 166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTLYSL 240 (270)
T ss_pred CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHH
Confidence 1123467999999987888999999999999999886 88887554322211111000 0112334566789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+.+||..+|++|||+.+++..|+.+..
T Consensus 241 i~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 241 MTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=210.32 Aligned_cols=172 Identities=16% Similarity=0.283 Sum_probs=135.7
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~- 76 (357)
++|++|.+++... ....+++..++.++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 91 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 169 (269)
T cd08528 91 IEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESK 169 (269)
T ss_pred CCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccceeecccccc
Confidence 4688999988432 34579999999999999999999996 56 9999999999999999999999999987655432
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|++||.+.+..++.++|+||||+++|+|++|..|+..................+ .....++..+.++
T Consensus 170 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l 245 (269)
T cd08528 170 LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP----LPEGMYSEDVTDV 245 (269)
T ss_pred cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc----CCcccCCHHHHHH
Confidence 3457889999999998888999999999999999999998875433222211111111111 1111345789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+.+||+.||++||++.++.+++.
T Consensus 246 i~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 246 ITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHCCCCCccCCCHHHHHHHhc
Confidence 99999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=210.61 Aligned_cols=172 Identities=22% Similarity=0.274 Sum_probs=136.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
++||+|.+++.. ..+.+++.+++.|+.|++.||.|||+.+ ++||||||+||+++.++.++++|||++........
T Consensus 87 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd05066 87 MENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY 164 (267)
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccceee
Confidence 478999999964 3467899999999999999999999999 99999999999999999999999999876543321
Q ss_pred ----ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 78 ----YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 78 ----~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
..++..|++||.+.+..++.++|+||||+++|++++ |..|+............... .....+..+++.+.
T Consensus 165 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 239 (267)
T cd05066 165 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-----YRLPAPMDCPAALH 239 (267)
T ss_pred ecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-----CcCCCCCCCCHHHH
Confidence 112457999999998889999999999999999886 88777543222111111111 11122334567899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+++.+||+.+|.+||++.++++.|..+
T Consensus 240 ~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 240 QLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-28 Score=220.32 Aligned_cols=168 Identities=18% Similarity=0.284 Sum_probs=127.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCccCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++. .+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....||
T Consensus 103 ~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t 178 (343)
T cd07878 103 GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVAT 178 (343)
T ss_pred CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccceecCCCcCCcccc
Confidence 678888773 467999999999999999999999999 999999999999999999999999998765443 345689
Q ss_pred CCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc-----------ccc--------cc--ccc
Q 018348 82 LAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-----------QML--------TD--SCL 139 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~-----------~~~--------~~--~~~ 139 (357)
..|+|||++.+ ..++.++|||||||++|+|++|..||............. ..+ .. +..
T Consensus 179 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (343)
T cd07878 179 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHM 258 (343)
T ss_pred ccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccc
Confidence 99999999876 467889999999999999999998876432110000000 000 00 000
Q ss_pred cC----CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 140 EG----QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 140 ~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.. .......+.+.+++.+||+.||.+|||+.+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 259 PQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred cchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 000112356789999999999999999999985
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=221.34 Aligned_cols=169 Identities=17% Similarity=0.178 Sum_probs=129.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 125 ~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~ 200 (370)
T cd05621 125 MPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRC 200 (370)
T ss_pred CCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccCCceec
Confidence 57999999994 346899999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCCCCchhhhcCC----CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~----~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
....||..|+|||++.+. .++.++|+|||||++|+|++|..||.................. ...+.....+..+
T Consensus 201 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~~~~s~~~ 278 (370)
T cd05621 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS--LNFPEDVEISKHA 278 (370)
T ss_pred ccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcc--cCCCCcccCCHHH
Confidence 245689999999999753 3678999999999999999999998765432222111111000 1111112345778
Q ss_pred HHHHHHhhhcCCCC--CCChhhHHHH
Q 018348 152 VRLASRCLQYEPRE--RPNPKSLVTA 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~--Rps~~~i~~~ 175 (357)
.+++.+|+..++.+ |+++.+++..
T Consensus 279 ~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 279 KNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HHHHHHHccCchhccCCCCHHHHhcC
Confidence 99999999855543 7888888764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-27 Score=207.70 Aligned_cols=169 Identities=17% Similarity=0.218 Sum_probs=133.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|.||+++.++.++|+|||++.......
T Consensus 80 ~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (256)
T cd06612 80 CGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRN 157 (256)
T ss_pred CCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCccccc
Confidence 468899999853 3568999999999999999999999999 9999999999999999999999999987654432
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|++||++.+..++.++||||||+++|+|++|..|+............... .. .....+..++..+.+++.
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~i~ 234 (256)
T cd06612 158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK-PP--PTLSDPEKWSPEFNDFVK 234 (256)
T ss_pred cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC-CC--CCCCchhhcCHHHHHHHH
Confidence 234788999999998888899999999999999999999887543221111000000 00 011122334578999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||++|||+.+|+.
T Consensus 235 ~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 235 KCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHhcChhhCcCHHHHhc
Confidence 999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=212.10 Aligned_cols=172 Identities=23% Similarity=0.318 Sum_probs=132.1
Q ss_pred CCCccHHhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC
Q 018348 1 MPNETLAKHLFHWE--------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~ 60 (357)
+++|+|.+++.... ...+++..++.++.|++.||.|||..+ ++||||||+||+++.++.
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~~~~~ 168 (288)
T cd05050 90 MAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVGENMV 168 (288)
T ss_pred CCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEecCCCc
Confidence 46889999996321 135788999999999999999999999 999999999999999999
Q ss_pred eEEecCCCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccc
Q 018348 61 PRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 133 (357)
Q Consensus 61 ~kl~dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~ 133 (357)
++|+|||++....... ....+..|+|||.+.+..++.++||||||+++|+|++ |..|+............
T Consensus 169 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~--- 245 (288)
T cd05050 169 VKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYV--- 245 (288)
T ss_pred eEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---
Confidence 9999999876543221 2234567999999988889999999999999999997 66666433222111110
Q ss_pred cccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcc
Q 018348 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
.... ....+..++..+.+++.+||+.+|++|||+.+++..|++
T Consensus 246 -~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 246 -RDGN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -hcCC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 0000 011233456789999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=208.07 Aligned_cols=170 Identities=19% Similarity=0.295 Sum_probs=132.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.++++.+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 81 MEHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred CCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence 468999999953 3457899999999999999999999999 9999999999999999999999999877543321
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|++||.+.++.++.++||||||+++|+|++ |..|+............... .....+...+..+.++
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 233 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-----FRLYKPRLASQSVYEL 233 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-----CCCCCCCCCCHHHHHH
Confidence 1234568999999988888999999999999999998 77776543322211111110 0111122345789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+.+||+.+|++||++.++++.|.
T Consensus 234 ~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 234 MQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHHcccChhhCCCHHHHHHhhC
Confidence 99999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=220.89 Aligned_cols=167 Identities=14% Similarity=0.225 Sum_probs=126.3
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCccC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~g 80 (357)
++|.+++. ..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....+
T Consensus 113 ~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~ 187 (364)
T cd07875 113 ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 187 (364)
T ss_pred CCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcc
Confidence 45666663 35888999999999999999999999 999999999999999999999999998765443 23468
Q ss_pred CCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccc--------------------------
Q 018348 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-------------------------- 134 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~-------------------------- 134 (357)
|..|+|||++.+..++.++|||||||++|+|++|+.||................
T Consensus 188 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (364)
T cd07875 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYA 267 (364)
T ss_pred cCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcC
Confidence 899999999998889999999999999999999998886532111100000000
Q ss_pred -------ccccc---cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 135 -------TDSCL---EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 135 -------~~~~~---~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
..... ...........+.+++.+||+.||.+|||+.++++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred CCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 000111123578899999999999999999998863
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=209.99 Aligned_cols=169 Identities=18% Similarity=0.195 Sum_probs=129.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++. ..+.+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 88 ~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06645 88 CGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRK 164 (267)
T ss_pred cCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccc
Confidence 36899999985 3568999999999999999999999999 999999999999999999999999987654322 2
Q ss_pred CccCCCCCCchhhhc---CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhc-cccccccccccCCCCchhHHHHH
Q 018348 77 SYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-NLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...|+..|+|||++. ...++.++|+|||||++|+|++|..|+........... .......+... ....++..+.
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 242 (267)
T cd06645 165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFH 242 (267)
T ss_pred cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHH
Confidence 346889999999984 34578899999999999999999987654321111000 00111111111 1113446789
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+++.+||+.+|++||++.+|+.
T Consensus 243 ~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 243 HFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHccCCchhCcCHHHHhc
Confidence 9999999999999999998875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=210.13 Aligned_cols=172 Identities=20% Similarity=0.290 Sum_probs=133.0
Q ss_pred CCccHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-
Q 018348 2 PNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 2 ~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~- 76 (357)
++|+|.+++... +...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||+++......
T Consensus 90 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~ 168 (273)
T cd05074 90 KHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY 168 (273)
T ss_pred CCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECcccccccccCCcc
Confidence 578998887532 1235899999999999999999999999 9999999999999999999999999987653321
Q ss_pred -----CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 77 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 77 -----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...++..|++||.+.+..++.++||||||+++|+|++ |..|+............... .....+..++..
T Consensus 169 ~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 243 (273)
T cd05074 169 YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-----NRLKQPPDCLED 243 (273)
T ss_pred eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHH
Confidence 2234567999999988888999999999999999999 66666543222111111100 011122345578
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+.+++.+||+.+|++|||+.+++..|+.+
T Consensus 244 ~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 244 VYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 99999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=216.37 Aligned_cols=173 Identities=20% Similarity=0.229 Sum_probs=128.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++||+........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 57899999996544557999999999999999999999999 999999999999999999999999854332111
Q ss_pred ------CCccCCCCCCchhhhcC--CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc----cccccc-------
Q 018348 76 ------KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN----LQMLTD------- 136 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~----~~~~~~------- 136 (357)
....++..|+|||++.+ ..++.++|||||||++|+|++|..||............ .....+
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE 239 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence 12245678999999976 35789999999999999999999887542211100000 000000
Q ss_pred -------------------------c----cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 137 -------------------------S----CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 137 -------------------------~----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+ ..........++.+.+++.+||+.||++|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0 0000111223567899999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=220.75 Aligned_cols=168 Identities=18% Similarity=0.196 Sum_probs=128.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ...++...+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~ 200 (371)
T cd05622 125 MPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 200 (371)
T ss_pred CCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccc
Confidence 47999999994 346899999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCCCCchhhhcCC----CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~----~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
....||+.|+|||++.+. .++.++|||||||++|+|++|..||.................. .........+..+
T Consensus 201 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~ 278 (371)
T cd05622 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS--LTFPDDNDISKEA 278 (371)
T ss_pred cCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCc--ccCCCcCCCCHHH
Confidence 245689999999999753 2688999999999999999999998765432222221111100 1111122456789
Q ss_pred HHHHHHhhhcCCCC---CCChhhHHHH
Q 018348 152 VRLASRCLQYEPRE---RPNPKSLVTA 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~---Rps~~~i~~~ 175 (357)
.++|.+||+ +|.. |+++.+|+..
T Consensus 279 ~~li~~~L~-~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 279 KNLICAFLT-DREVRLGRNGVEEIKRH 304 (371)
T ss_pred HHHHHHHcC-ChhhhcCCCCHHHHhcC
Confidence 999999998 4444 6677777764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=221.90 Aligned_cols=174 Identities=20% Similarity=0.284 Sum_probs=135.7
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------ 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------ 76 (357)
+++|.+.+.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 219 ~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~ 297 (400)
T cd05105 219 DSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKG 297 (400)
T ss_pred hhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccC
Confidence 456777775545568999999999999999999999999 9999999999999999999999999987543321
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|++.............. ......+..++..+.+++
T Consensus 298 ~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li 373 (400)
T cd05105 298 STFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKS----GYRMAKPDHATQEVYDIM 373 (400)
T ss_pred CcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhc----CCCCCCCccCCHHHHHHH
Confidence 2235678999999988889999999999999999997 77776543221110000000 111123345567899999
Q ss_pred HHhhhcCCCCCCChhhHHHHhccccc
Q 018348 156 SRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
.+||+.+|++||++.+|.+.|+.+.+
T Consensus 374 ~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 374 VKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 99999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-28 Score=222.88 Aligned_cols=169 Identities=20% Similarity=0.209 Sum_probs=129.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC------
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~------ 74 (357)
++||+|.++|. +.+.+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++..+..
T Consensus 83 ~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~ 159 (376)
T cd05598 83 IPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (376)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence 47999999996 3567899999999999999999999999 99999999999999999999999998742210
Q ss_pred -----------------------------------------CCCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc
Q 018348 75 -----------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113 (357)
Q Consensus 75 -----------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~ 113 (357)
.....||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~ 239 (376)
T cd05598 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 239 (376)
T ss_pred cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhh
Confidence 012368999999999998889999999999999999999
Q ss_pred CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCC---ChhhHHHH
Q 018348 114 GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP---NPKSLVTA 175 (357)
Q Consensus 114 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp---s~~~i~~~ 175 (357)
|..||................. .........+++.+.+++.+|+ .+|.+|+ ++.+++..
T Consensus 240 G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 240 GQPPFLADTPAETQLKVINWET--TLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred CCCCCCCCCHHHHHHHHhccCc--cccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 9999876543222111111100 0111112234577888998876 5999999 77777653
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=221.46 Aligned_cols=170 Identities=19% Similarity=0.291 Sum_probs=129.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------ 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------ 76 (357)
+++|.+++. ..+.+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.++|+|||+++......
T Consensus 169 ~~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~ 245 (392)
T PHA03207 169 KCDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCY 245 (392)
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCccccccccc
Confidence 467888883 4578999999999999999999999999 9999999999999999999999999987544321
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhH----Hhhh-------cccc--c-----c----
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD----LIRD-------RNLQ--M-----L---- 134 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~----~~~~-------~~~~--~-----~---- 134 (357)
...||..|+|||++.+..++.++|||||||++|||++|+.||...... .+.. .... . +
T Consensus 246 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~ 325 (392)
T PHA03207 246 GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHF 325 (392)
T ss_pred ccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHH
Confidence 346899999999999888999999999999999999999887543210 0000 0000 0 0
Q ss_pred --ccccccCCC-------CchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 135 --TDSCLEGQF-------TDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 135 --~~~~~~~~~-------~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
.....+..+ ....+.++.++|.+||+.||++|||+.+++..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 326 KQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 01234578899999999999999999999864
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=217.31 Aligned_cols=160 Identities=24% Similarity=0.347 Sum_probs=123.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC------CccCCCCCCchhhh
Q 018348 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYL 90 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------~~~gt~~y~aPE~~ 90 (357)
.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... ...++..|++||.+
T Consensus 175 ~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 253 (343)
T cd05103 175 VLTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 253 (343)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHh
Confidence 4788899999999999999999999 9999999999999999999999999987643221 12345679999999
Q ss_pred cCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCCh
Q 018348 91 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169 (357)
Q Consensus 91 ~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 169 (357)
.+..++.++||||||+++|+|++ |..|+.............. .......+...++.+.+++.+||+.+|++||++
T Consensus 254 ~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~ 329 (343)
T cd05103 254 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 329 (343)
T ss_pred cCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh----ccCCCCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence 88889999999999999999996 7777654221110000000 001111222344679999999999999999999
Q ss_pred hhHHHHhccccc
Q 018348 170 KSLVTALSPLQK 181 (357)
Q Consensus 170 ~~i~~~L~~~~~ 181 (357)
.+|+..|+.+..
T Consensus 330 ~eil~~l~~~~~ 341 (343)
T cd05103 330 SELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHHh
Confidence 999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=212.59 Aligned_cols=169 Identities=21% Similarity=0.256 Sum_probs=132.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CCc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~~ 78 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++++|||++...... ...
T Consensus 79 ~~~~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (279)
T cd05633 79 MNGGDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (279)
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCc
Confidence 57899999996 3467999999999999999999999999 999999999999999999999999998654332 234
Q ss_pred cCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 79 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
.|+..|+|||.+.+ ..++.++|+|||||++++|++|..||.......... .... ........+...+..+.+++.+
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~li~~ 232 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRM-TLTVNVELPDSFSPELKSLLEG 232 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH--HHHH-hhcCCcCCccccCHHHHHHHHH
Confidence 68899999999864 457899999999999999999998875432111000 0000 0011122344556789999999
Q ss_pred hhhcCCCCCC-----ChhhHHHH
Q 018348 158 CLQYEPRERP-----NPKSLVTA 175 (357)
Q Consensus 158 cl~~~p~~Rp-----s~~~i~~~ 175 (357)
||..||++|| ++.++++.
T Consensus 233 ~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 233 LLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HhcCCHHHhcCCCCCCHHHHHhC
Confidence 9999999999 58877663
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=213.18 Aligned_cols=167 Identities=18% Similarity=0.229 Sum_probs=132.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. ...+++.++..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (296)
T cd06655 98 LAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRS 173 (296)
T ss_pred cCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccccccCC
Confidence 47899999984 457999999999999999999999999 9999999999999999999999999877654332
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|+|||.+.+..++.++|||||||++|+|++|..||............... .. .....+..++..+.++|.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~li~ 250 (296)
T cd06655 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GT--PELQNPEKLSPIFRDFLN 250 (296)
T ss_pred CcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CC--cccCCcccCCHHHHHHHH
Confidence 235788999999998888899999999999999999999887654321111000000 00 011123345578999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||..||.+||++.+|+.
T Consensus 251 ~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 251 RCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHhhcChhhCCCHHHHhh
Confidence 999999999999999875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=207.85 Aligned_cols=168 Identities=20% Similarity=0.248 Sum_probs=134.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC-CCeEEecCCCccccCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDGK--- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~-~~~kl~dfg~~~~~~~~~--- 76 (357)
+++++|.+++....+..+++..+..++.+++.+|.|||+.+ ++|+||+|.||+++.+ +.++++|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 47899999997544567999999999999999999999999 9999999999999854 468999999987654332
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|+|||.+.+...+.++|+||||+++|+|++|..|+................ ....+..++..+.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~ 234 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT-----FAPISDRYSPDLRQLIL 234 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC-----CCCCCCCcCHHHHHHHH
Confidence 3457889999999988888999999999999999999998876543222211111111 11223345678999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.+|++|||+.+++.
T Consensus 235 ~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 235 SMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHccCChhhCCCHHHHhh
Confidence 999999999999999886
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=219.08 Aligned_cols=167 Identities=14% Similarity=0.195 Sum_probs=124.8
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCccC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~g 80 (357)
++|.+.+. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....|
T Consensus 110 ~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 184 (359)
T cd07876 110 ANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV 184 (359)
T ss_pred cCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcc
Confidence 45555552 35888999999999999999999999 999999999999999999999999998754332 23467
Q ss_pred CCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc------------------cccc--ccccc
Q 018348 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL------------------QMLT--DSCLE 140 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~------------------~~~~--~~~~~ 140 (357)
|..|+|||++.+..++.++||||||+++|+|++|..||............. .... .+...
T Consensus 185 t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (359)
T cd07876 185 TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYP 264 (359)
T ss_pred cCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCC
Confidence 899999999998889999999999999999999998886432110000000 0000 00000
Q ss_pred ----------------CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 141 ----------------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 141 ----------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
.......+..+.+++.+||+.||++|||+.+++..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 265 GISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred CcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00111134678999999999999999999999863
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-27 Score=209.35 Aligned_cols=165 Identities=18% Similarity=0.274 Sum_probs=132.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++. ..++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++..... .
T Consensus 81 ~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (274)
T cd06609 81 CGGGSCLDLLK---PGKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRN 156 (274)
T ss_pred eCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeecccccccc
Confidence 46899999995 338999999999999999999999999 999999999999999999999999998766543 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCch-hHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD-DGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li 155 (357)
...++..|++||.+.+..++.++|+||||+++|+|++|..|+............... .....+.. ++..+.+++
T Consensus 157 ~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l 231 (274)
T cd06609 157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-----NPPSLEGNKFSKPFKDFV 231 (274)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-----CCCCCcccccCHHHHHHH
Confidence 346788899999999888999999999999999999999887543221111111111 11111112 457899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||..+|++||++++++.
T Consensus 232 ~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 232 SLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHHhhCChhhCcCHHHHhh
Confidence 9999999999999999976
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=212.38 Aligned_cols=167 Identities=20% Similarity=0.267 Sum_probs=131.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++++|.+++. .+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 101 ~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 176 (292)
T cd06658 101 LEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK 176 (292)
T ss_pred CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCc
Confidence 47899999884 456899999999999999999999999 999999999999999999999999987654322 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...|+..|+|||.+.+..++.++|+||||+++|||++|..|+........... .......... .....+..+..++.
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~li~ 253 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IRDNLPPRVK--DSHKVSSVLRGFLD 253 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcCCCccc--cccccCHHHHHHHH
Confidence 34578899999999888889999999999999999999988765332211111 1111111111 11234567899999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||..||.+|||+.++++
T Consensus 254 ~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 254 LMLVREPSQRATAQELLQ 271 (292)
T ss_pred HHccCChhHCcCHHHHhh
Confidence 999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=220.95 Aligned_cols=168 Identities=20% Similarity=0.215 Sum_probs=126.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC------
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~------ 74 (357)
++||+|.+++. +.+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++..+..
T Consensus 83 ~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 83 IPGGDMMSLLI--RMGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 57999999996 3467899999999999999999999999 99999999999999999999999998642210
Q ss_pred ---------------------------------------------CCCccCCCCCCchhhhcCCCCCCcccchhHHHHHH
Q 018348 75 ---------------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLL 109 (357)
Q Consensus 75 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~ 109 (357)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 01235889999999999888999999999999999
Q ss_pred HHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCC---hhhHHH
Q 018348 110 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 174 (357)
Q Consensus 110 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps---~~~i~~ 174 (357)
||++|..||................. ..........++...+++.+|+ .+|.+|++ +.+++.
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQT--SLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCC--CcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 99999999875433221111111100 0111111234567888888876 59999987 555543
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=220.84 Aligned_cols=159 Identities=20% Similarity=0.291 Sum_probs=125.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC------CCccCCCCCCchhhh
Q 018348 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYL 90 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------~~~~gt~~y~aPE~~ 90 (357)
.+++..++.|+.|++.||.|||+.+ ++||||||.||+++.++.++|+|||+++..... ....++..|++||.+
T Consensus 235 ~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~ 313 (401)
T cd05107 235 ALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESI 313 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHh
Confidence 4788889999999999999999999 999999999999999999999999998754321 123456789999999
Q ss_pred cCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCCh
Q 018348 91 RTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169 (357)
Q Consensus 91 ~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 169 (357)
.+..++.++||||||+++|||++ |..|+.............. .......+..++..+.+++.+||+.+|.+||++
T Consensus 314 ~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~ 389 (401)
T cd05107 314 FNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK----RGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDF 389 (401)
T ss_pred cCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH----cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence 88888999999999999999998 7767654322111111000 011122344456889999999999999999999
Q ss_pred hhHHHHhcccc
Q 018348 170 KSLVTALSPLQ 180 (357)
Q Consensus 170 ~~i~~~L~~~~ 180 (357)
.+|+..|+.+.
T Consensus 390 ~ell~~L~~~~ 400 (401)
T cd05107 390 SQLVHLVGDLL 400 (401)
T ss_pred HHHHHHHHHHh
Confidence 99999998753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=208.59 Aligned_cols=172 Identities=23% Similarity=0.332 Sum_probs=133.0
Q ss_pred CCCccHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---
Q 018348 1 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~--- 76 (357)
++|++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 159 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT 159 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence 478999999964332 57899999999999999999999999 9999999999999999999999999876554322
Q ss_pred -----CccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCC-CchhHH
Q 018348 77 -----SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF-TDDDGT 149 (357)
Q Consensus 77 -----~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 149 (357)
...++..|++||.+... ..+.++|+||||+++++|++|..|+............... ..+...... ....+.
T Consensus 160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (267)
T cd06610 160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGADYKKYSK 238 (267)
T ss_pred ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-CCCCcCCccccccccH
Confidence 23578899999999876 6889999999999999999999887543322111111111 011111111 124567
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+.+++.+||..||++||++.+++.
T Consensus 239 ~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 239 SFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhh
Confidence 8999999999999999999999875
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=210.96 Aligned_cols=167 Identities=20% Similarity=0.278 Sum_probs=132.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++|++|.+++.. +++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++++|||.+...... .
T Consensus 98 ~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 173 (285)
T cd06648 98 LEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK 173 (285)
T ss_pred cCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccc
Confidence 468999999953 67999999999999999999999999 999999999999999999999999987654332 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...|+..|++||.+.+..++.++||||||+++++|++|..|+............... ..+.. ..+..++..+.++++
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~l~~li~ 250 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPKL--KNLHKVSPRLRSFLD 250 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCCC--cccccCCHHHHHHHH
Confidence 345788999999998888899999999999999999999887553322111111111 11111 112224578999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.+|++||++.+++.
T Consensus 251 ~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 251 RMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHcccChhhCcCHHHHcc
Confidence 999999999999999885
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-27 Score=208.55 Aligned_cols=166 Identities=17% Similarity=0.297 Sum_probs=132.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++.......
T Consensus 84 ~~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06642 84 LGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred cCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhh
Confidence 47899999984 467999999999999999999999999 9999999999999999999999999987654332
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|++||++.+..++.++|+||||+++++|++|..|+........... .........+..++..+.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06642 160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL-----IPKNSPPTLEGQYSKPFKEFVE 234 (277)
T ss_pred cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh-----hhcCCCCCCCcccCHHHHHHHH
Confidence 23578889999999988889999999999999999999987653322111110 0111111223345578999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+||+.+|++||++.+++..
T Consensus 235 ~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 235 ACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHccCCcccCcCHHHHHHh
Confidence 9999999999999999873
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-27 Score=200.44 Aligned_cols=168 Identities=18% Similarity=0.252 Sum_probs=129.4
Q ss_pred cHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCccC
Q 018348 5 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYST 80 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~~g 80 (357)
+|...+.. -..+++..++.-++.|+++|++|||..+ |+|||||++|+|+...|.+||+|||+++.++.. +..+-
T Consensus 162 DLksl~d~-m~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVV 239 (419)
T KOG0663|consen 162 DLKSLMET-MKQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVV 239 (419)
T ss_pred hHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEE
Confidence 45666642 3468999999999999999999999999 999999999999999999999999999988765 34456
Q ss_pred CCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHH-------------------------hhhcccccc
Q 018348 81 NLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-------------------------IRDRNLQML 134 (357)
Q Consensus 81 t~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~-------------------------~~~~~~~~~ 134 (357)
|++|.|||.+.+. .|+...|+||+|||+.||+++++.|++..... ++.......
T Consensus 240 TLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~ 319 (419)
T KOG0663|consen 240 TLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEH 319 (419)
T ss_pred EeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCC
Confidence 9999999999985 48999999999999999999998877632110 000011111
Q ss_pred ccccccCCCCch-hHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 135 TDSCLEGQFTDD-DGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 135 ~~~~~~~~~~~~-~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....++..++.. ....-.+|+..+|..||.+|.|+.+.+.
T Consensus 320 pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 320 PYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred CchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 111222222221 3466788999999999999999998775
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=220.18 Aligned_cols=170 Identities=18% Similarity=0.258 Sum_probs=128.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----CC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 77 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-----~~ 77 (357)
+++|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ..
T Consensus 87 ~~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~ 163 (372)
T cd07853 87 QSDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQ 163 (372)
T ss_pred ccCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccCccccCCC
Confidence 356777774 4568999999999999999999999999 999999999999999999999999998754332 12
Q ss_pred ccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc-----------------------cc
Q 018348 78 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-----------------------QM 133 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~-----------------------~~ 133 (357)
..++..|+|||++.+. .++.++|||||||++|||++|+.||............. ..
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 243 (372)
T cd07853 164 EVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRG 243 (372)
T ss_pred CCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhC
Confidence 3568899999999874 47889999999999999999998875432111000000 00
Q ss_pred ccc-ccc--cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 134 LTD-SCL--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 134 ~~~-~~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
... +.. ........++.+.+++.+||+.||.+|||+.+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 244 PHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000 000 001222345788999999999999999999998763
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=221.59 Aligned_cols=178 Identities=20% Similarity=0.285 Sum_probs=149.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCc--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-- 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 78 (357)
|.+|+|-|||++.+..-++.-..+.++.||..|++||..++ +|||||-..|+|+..+..|||+|||+++.+...+..
T Consensus 345 M~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAH 423 (1157)
T KOG4278|consen 345 MCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAH 423 (1157)
T ss_pred ccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecc
Confidence 78999999998766677888888899999999999999999 999999999999999999999999999988765422
Q ss_pred cC---CCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 79 ST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 79 ~g---t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
.| .+.|+|||-+....++.|+|||+|||+|||+.| |..|+++-.... +..+.....+...|..|++.+.+|
T Consensus 424 AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq-----VY~LLEkgyRM~~PeGCPpkVYeL 498 (1157)
T KOG4278|consen 424 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYGLLEKGYRMDGPEGCPPKVYEL 498 (1157)
T ss_pred cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH-----HHHHHhccccccCCCCCCHHHHHH
Confidence 23 467999999999999999999999999999976 556766543322 223334445556677889999999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
|+.||+++|++||++.+|-+.++-+..+..
T Consensus 499 MraCW~WsPsDRPsFaeiHqafEtmf~~sS 528 (1157)
T KOG4278|consen 499 MRACWNWSPSDRPSFAEIHQAFETMFSSSS 528 (1157)
T ss_pred HHHHhcCCcccCccHHHHHHHHHHHhcccc
Confidence 999999999999999999999988766543
|
|
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-27 Score=206.20 Aligned_cols=170 Identities=25% Similarity=0.366 Sum_probs=132.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||+++.......
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (258)
T smart00219 83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKK 161 (258)
T ss_pred cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceeccccccccc
Confidence 46899999996433333999999999999999999999999 99999999999999999999999999876554321
Q ss_pred --ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 78 --YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 78 --~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
..++..|++||.+.+..++.++|+||||+++++|++ |..|+................ ....+...+..+.++
T Consensus 162 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 236 (258)
T smart00219 162 KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-----RLPKPENCPPEIYKL 236 (258)
T ss_pred ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-----CCCCCCcCCHHHHHH
Confidence 225678999999987889999999999999999998 665554332222111111111 112223356789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHh
Q 018348 155 ASRCLQYEPRERPNPKSLVTAL 176 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L 176 (357)
+.+||..+|++|||+.+++..|
T Consensus 237 i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 237 MLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHCcCChhhCcCHHHHHhhC
Confidence 9999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=208.19 Aligned_cols=166 Identities=17% Similarity=0.239 Sum_probs=129.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++++|.+++. ..+.+++..++.++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++.....
T Consensus 88 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (266)
T cd06651 88 MPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGT 164 (266)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccccccCC
Confidence 36889999996 3457899999999999999999999999 999999999999999999999999988654321
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....++..|+|||++.+..++.++||||||+++|+|++|+.|+................ .....+....+.+..
T Consensus 165 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 240 (266)
T cd06651 165 GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP----TNPQLPSHISEHARD 240 (266)
T ss_pred ccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC----CCCCCchhcCHHHHH
Confidence 12347889999999988888999999999999999999998875432211111111111 112233344567788
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++ +||..+|++||++.+|+.
T Consensus 241 li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 241 FL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HH-HHhcCChhhCcCHHHHhc
Confidence 88 688889999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=220.44 Aligned_cols=166 Identities=18% Similarity=0.266 Sum_probs=134.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCCCCeeeCCC-CCeEEecCCCccccCCC--C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG--K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~~~H~dlk~~Nill~~~-~~~kl~dfg~~~~~~~~--~ 76 (357)
|..|||..|+. +-+.++.+-+..|++||++||.|||++. ||||||||..||||+.+ |.|||+|+|++...... +
T Consensus 125 ~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ak 202 (632)
T KOG0584|consen 125 FTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAK 202 (632)
T ss_pred ccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccc
Confidence 56899999996 4678999999999999999999999986 69999999999999855 89999999999876543 5
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhH-HhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
..+||+.|||||... ..|....||||||++++||+|+..|+..-... .+..+....+.+..+ .... .+++.++|
T Consensus 203 svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl-~kV~---dPevr~fI 277 (632)
T KOG0584|consen 203 SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAAL-SKVK---DPEVREFI 277 (632)
T ss_pred eeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHh-hccC---CHHHHHHH
Confidence 668999999999998 78999999999999999999999887653322 222222222222211 1111 36899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+|+.. .++|||+.+++.
T Consensus 278 ekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 278 EKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHhcC-chhccCHHHHhh
Confidence 999999 999999999875
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=212.58 Aligned_cols=173 Identities=18% Similarity=0.151 Sum_probs=134.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC------
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~------ 74 (357)
++||+|.+++. ..+++++..+..++.+++.||.|||+.+ ++||||||.||+++.++.++++|||+++....
T Consensus 83 ~~g~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 83 VEGGDCATLLK--NIGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 57899999995 3467999999999999999999999999 99999999999999999999999998763110
Q ss_pred -------------CCCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccC
Q 018348 75 -------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 141 (357)
Q Consensus 75 -------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
.....++..|++||.+.+..++.++|+||||+++|+|++|..|+.................. ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~---~~ 236 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE---WP 236 (305)
T ss_pred cccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC---CC
Confidence 01134677899999998888899999999999999999999888754433322221111100 00
Q ss_pred CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 142 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
..+..++..+.+++.+||+.+|++||+..++.+.|+.-
T Consensus 237 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 237 EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 11113457799999999999999999988777777653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-27 Score=206.92 Aligned_cols=170 Identities=16% Similarity=0.191 Sum_probs=132.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (262)
T cd06613 82 CGGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK 159 (262)
T ss_pred CCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence 367899998853 3368999999999999999999999999 999999999999999999999999988765432 2
Q ss_pred CccCCCCCCchhhhcCC---CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc-cccccccCCCCchhHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~ 152 (357)
...++..|++||.+.+. .++.++|+||||+++|+|++|..|+............... ..... ...+...+..+.
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 237 (262)
T cd06613 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPK--LKDKEKWSPVFH 237 (262)
T ss_pred cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc--ccchhhhhHHHH
Confidence 34578889999999776 7888999999999999999999887643221111111111 01111 112234457899
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+++.+||..+|.+|||+.+|+.
T Consensus 238 ~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 238 DFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHcCCChhhCCCHHHHhc
Confidence 9999999999999999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-27 Score=211.77 Aligned_cols=160 Identities=19% Similarity=0.270 Sum_probs=123.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCccCCCCCCchhh
Q 018348 14 ETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEY 89 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~gt~~y~aPE~ 89 (357)
....+++..+..++.+++.||+|||+. + ++||||||+||+++.++.++|+|||+++..... ....|+..|++||+
T Consensus 100 ~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~ 178 (288)
T cd06616 100 LKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPER 178 (288)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHH
Confidence 356899999999999999999999975 7 999999999999999999999999998654332 23457889999999
Q ss_pred hcCC---CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCC
Q 018348 90 LRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 166 (357)
Q Consensus 90 ~~~~---~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 166 (357)
+.+. .++.++||||||+++|+|++|+.|+..................+......+..++..+.+++.+||+.+|++|
T Consensus 179 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 258 (288)
T cd06616 179 IDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKR 258 (288)
T ss_pred hccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhC
Confidence 9865 5788999999999999999999887643211100000000111112222223456789999999999999999
Q ss_pred CChhhHHH
Q 018348 167 PNPKSLVT 174 (357)
Q Consensus 167 ps~~~i~~ 174 (357)
||+.+|+.
T Consensus 259 pt~~~i~~ 266 (288)
T cd06616 259 PKYKELLE 266 (288)
T ss_pred cCHHHHhc
Confidence 99999886
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-27 Score=207.34 Aligned_cols=171 Identities=20% Similarity=0.299 Sum_probs=131.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++.. .+.+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++++|||+++.....
T Consensus 90 ~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 166 (272)
T cd06629 90 VPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQ 166 (272)
T ss_pred CCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeeccccccccccccccc
Confidence 478999999963 468999999999999999999999999 999999999999999999999999998754322
Q ss_pred -CCccCCCCCCchhhhcCCC--CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~--~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
....++..|++||.+.... ++.++|+||||++++++++|..|+............................++..+.
T Consensus 167 ~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T cd06629 167 NMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVAL 246 (272)
T ss_pred cccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHH
Confidence 1235788999999987654 7889999999999999999998875432211111100011111111122223467899
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+++.+||+.+|++||++.+|+.
T Consensus 247 ~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 247 DFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred HHHHHHhcCChhhCCCHHHHhh
Confidence 9999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-27 Score=204.04 Aligned_cols=171 Identities=20% Similarity=0.258 Sum_probs=128.7
Q ss_pred ccHHhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CC
Q 018348 4 ETLAKHLFHWET--HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 77 (357)
Q Consensus 4 gsL~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~ 77 (357)
-+|.+++..... ..++...+..++.||+.||+|||+++ |+||||||.||+|+.+|.+||+|||+++.+... +.
T Consensus 101 ~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~ 179 (323)
T KOG0594|consen 101 RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTP 179 (323)
T ss_pred ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchHHHhcCCcccccc
Confidence 356777754322 46788899999999999999999999 999999999999999999999999999876633 23
Q ss_pred ccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc--------------ccccc--ccc
Q 018348 78 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------MLTDS--CLE 140 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~--------------~~~~~--~~~ 140 (357)
.++|.+|.|||++.+. .|+...|+||+||++.||++++..|++......-..... ...+- ..+
T Consensus 180 evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~ 259 (323)
T KOG0594|consen 180 EVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFP 259 (323)
T ss_pred cEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCc
Confidence 4679999999999986 689999999999999999999988876432111111100 00000 011
Q ss_pred CCC-Cc-------hhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 141 GQF-TD-------DDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 141 ~~~-~~-------~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
... +. ...+...+++.+||+.+|.+|.|+..++..
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 260 KWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 110 11 112478899999999999999999988864
|
|
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-27 Score=210.34 Aligned_cols=170 Identities=13% Similarity=0.119 Sum_probs=130.6
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--- 75 (357)
++||||.+++... ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 106 ~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~ 184 (291)
T cd06639 106 CNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR 184 (291)
T ss_pred CCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEeecccchhccccccc
Confidence 4689999988532 3467999999999999999999999999 999999999999999999999999988764432
Q ss_pred -CCccCCCCCCchhhhcCC-----CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHH
Q 018348 76 -KSYSTNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~-----~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
....|+..|+|||.+... ..+.++|||||||++|+|++|+.|+................. .....+.....
T Consensus 185 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 261 (291)
T cd06639 185 RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPP---PTLLHPEKWCR 261 (291)
T ss_pred ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCC---CCCCcccccCH
Confidence 234578899999998653 257899999999999999999988754322111111111100 01111233446
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+.++|.+||+.+|++||++.+++.
T Consensus 262 ~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 262 SFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHHHHHHhhcChhhCcCHHHHhc
Confidence 7999999999999999999999886
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=224.98 Aligned_cols=171 Identities=20% Similarity=0.273 Sum_probs=126.6
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC------C
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------K 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------~ 76 (357)
+|+|.+++.. ..+.+++..++.|+.|++.||.|||+.+ |+||||||+|||++.++.++|+|||+++..... .
T Consensus 243 ~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 243 RSDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 4688888853 3457999999999999999999999999 999999999999999999999999998764322 1
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcch------------hHHhhhccc--cccccc-----
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA------------LDLIRDRNL--QMLTDS----- 137 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~------------~~~~~~~~~--~~~~~~----- 137 (357)
...||..|++||++.+..++.++|||||||++|||++|..++.... ...+..... ......
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 2458999999999998889999999999999999998875432110 000110000 000000
Q ss_pred ----------cccCCCC-------chhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 138 ----------CLEGQFT-------DDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 138 ----------~~~~~~~-------~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
....... ......+.+||.+||+.||.+|||+.+++..
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000000 0123478899999999999999999999863
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-27 Score=207.68 Aligned_cols=166 Identities=17% Similarity=0.284 Sum_probs=134.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++. .+++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++.......
T Consensus 84 ~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06640 84 LGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence 47899999994 457999999999999999999999999 9999999999999999999999999986654322
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|+|||.+.+...+.++|+||||+++|+|++|..|+........... .........+..++..+.+++.
T Consensus 160 ~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06640 160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL-----IPKNNPPTLTGEFSKPFKEFID 234 (277)
T ss_pred cccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh-----hhcCCCCCCchhhhHHHHHHHH
Confidence 23567889999999888889999999999999999999988754322211111 0111122334456788999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+||+.+|++||++.+++..
T Consensus 235 ~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 235 ACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHcccCcccCcCHHHHHhC
Confidence 9999999999999999764
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-27 Score=205.78 Aligned_cols=168 Identities=17% Similarity=0.237 Sum_probs=135.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++++|.+++.......+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 46889999996544557899999999999999999999999 9999999999999999999999999887654322
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...|+..|+|||++.+...+.++|+||||+++++|++|..|+................ ....+...+..+.+++.
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 234 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-----YPPVSSHYSYDLRNLVS 234 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-----CCCCcccCCHHHHHHHH
Confidence 2357888999999988888999999999999999999998876433222111111111 11223445678999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.+|++||++.+|+.
T Consensus 235 ~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 235 QLFKRNPRDRPSVNSILE 252 (256)
T ss_pred HHhhCChhhCcCHHHHhh
Confidence 999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-27 Score=208.67 Aligned_cols=168 Identities=23% Similarity=0.273 Sum_probs=131.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CCc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~~ 78 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||.||+++.++.++|+|||++...... ...
T Consensus 79 ~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (278)
T cd05606 79 MNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (278)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCc
Confidence 47899999985 4568999999999999999999999999 999999999999999999999999988754332 244
Q ss_pred cCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 79 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
.|+..|++||++.++ .++.++||||+|+++|+|++|..|+........... .... .......+...+..+.+++.+
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~--~~~~-~~~~~~~~~~~s~~~~~li~~ 232 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI--DRMT-LTMAVELPDSFSPELRSLLEG 232 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH--HHHh-hccCCCCCCcCCHHHHHHHHH
Confidence 688999999999754 578999999999999999999988765411110000 0000 001122333456789999999
Q ss_pred hhhcCCCCCC-----ChhhHHH
Q 018348 158 CLQYEPRERP-----NPKSLVT 174 (357)
Q Consensus 158 cl~~~p~~Rp-----s~~~i~~ 174 (357)
||..+|.+|| ++.++++
T Consensus 233 ~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 233 LLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HhhcCHHhccCCCCCCHHHHHh
Confidence 9999999999 7777764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-27 Score=213.07 Aligned_cols=116 Identities=17% Similarity=0.277 Sum_probs=96.3
Q ss_pred CccHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee----CCCCCeEEecCCCccc
Q 018348 3 NETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKN 71 (357)
Q Consensus 3 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill----~~~~~~kl~dfg~~~~ 71 (357)
+++|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++.
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 45676666421 1235899999999999999999999999 9999999999999 4567899999999876
Q ss_pred cCCC-------CCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCC
Q 018348 72 SRDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPP 119 (357)
Q Consensus 72 ~~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~ 119 (357)
.... ....||+.|+|||++.+. .++.++||||+||++|+|++|+.||.
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence 5432 234678999999999764 57889999999999999999998875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=211.94 Aligned_cols=167 Identities=19% Similarity=0.253 Sum_probs=132.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 173 (297)
T cd06656 98 LAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (297)
T ss_pred cCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEccCCccCcC
Confidence 47899999984 456899999999999999999999999 9999999999999999999999999887654332
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|++||.+.+..++.++|+||||+++|++++|..||.......... ............+...+..+.+++.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~ 250 (297)
T cd06656 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGTPELQNPERLSAVFRDFLN 250 (297)
T ss_pred cccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee---eeccCCCCCCCCccccCHHHHHHHH
Confidence 3457889999999988888999999999999999999998875432211100 0000001111123345577899999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.+|++||++.+++.
T Consensus 251 ~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 251 RCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHccCChhhCcCHHHHhc
Confidence 999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.4e-27 Score=208.72 Aligned_cols=171 Identities=12% Similarity=0.152 Sum_probs=131.1
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--- 75 (357)
++||+|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++.....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~ 180 (286)
T cd06638 102 CNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR 180 (286)
T ss_pred cCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCCEEEccCCceeecccCCCc
Confidence 4789999988532 3457899999999999999999999999 999999999999999999999999998765432
Q ss_pred -CCccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHH
Q 018348 76 -KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
....|+..|+|||.+.. ..++.++|||||||++|+|++|..|+............... ..+ ....+..++.
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~ 257 (286)
T cd06638 181 RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN-PPP--TLHQPELWSN 257 (286)
T ss_pred cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc-CCC--cccCCCCcCH
Confidence 23458899999999853 34688999999999999999999887543221111010000 000 1111223456
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
.+..++.+||+.||++|||+.+|+..
T Consensus 258 ~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 258 EFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhhc
Confidence 79999999999999999999999864
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-27 Score=210.92 Aligned_cols=172 Identities=20% Similarity=0.302 Sum_probs=131.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~ 77 (357)
++||+|.+++. +.+.+++..+..++.|++.||.|||+. + ++|+||||.||+++.++.++|+|||++...... ..
T Consensus 81 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (308)
T cd06615 81 MDGGSLDQVLK--KAGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 157 (308)
T ss_pred cCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCccccccccccc
Confidence 46899999996 346799999999999999999999984 6 999999999999999999999999987654332 34
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc---cccccc------------------
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---LQMLTD------------------ 136 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~---~~~~~~------------------ 136 (357)
..++..|++||++.+..++.++|+||||+++|+|++|..|+............ ......
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (308)
T cd06615 158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPM 237 (308)
T ss_pred CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchh
Confidence 56789999999998878899999999999999999999887543211110000 000000
Q ss_pred ----------ccccCCCC-chhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 137 ----------SCLEGQFT-DDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 137 ----------~~~~~~~~-~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
.......+ ...+.++.+++.+||..+|++||++.+|+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 238 AIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred hHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000111 1245679999999999999999999998864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-27 Score=215.92 Aligned_cols=114 Identities=15% Similarity=0.248 Sum_probs=99.3
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~ 79 (357)
.|+|.+++.. ...++++..+..|+.||+.||.|||+.+ |+||||||+||+++.++.++|+|||+++..... ....
T Consensus 140 ~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 140 SSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred CCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 4688888853 4568999999999999999999999999 999999999999999999999999998754322 2346
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCC
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~ 118 (357)
||..|+|||++.+..++.++|||||||++|||+++..++
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 899999999999888999999999999999999865543
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=214.87 Aligned_cols=172 Identities=16% Similarity=0.163 Sum_probs=129.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~ 160 (332)
T cd05623 83 YVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 160 (332)
T ss_pred cCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence 478999999963 3467999999999999999999999999 9999999999999999999999999986543221
Q ss_pred -CccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 77 -SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...||+.|+|||++.. ..++.++|||||||++|||++|+.||..................... ......++..
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~-p~~~~~~s~~ 239 (332)
T cd05623 161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF-PAQVTDVSED 239 (332)
T ss_pred cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccC-CCccccCCHH
Confidence 2468999999999863 45788999999999999999999998764432222221111100001 1112235678
Q ss_pred HHHHHHHhhhcCCCC--CCChhhHHHH
Q 018348 151 LVRLASRCLQYEPRE--RPNPKSLVTA 175 (357)
Q Consensus 151 l~~li~~cl~~~p~~--Rps~~~i~~~ 175 (357)
+.+++.+|+..++.+ |+++.+++..
T Consensus 240 ~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 240 AKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 999999988665444 5788887764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.3e-27 Score=211.49 Aligned_cols=169 Identities=21% Similarity=0.211 Sum_probs=131.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++|++|.+++....+..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (316)
T cd05574 83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS 161 (316)
T ss_pred cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence 36889999997545578999999999999999999999999 9999999999999999999999999876542211
Q ss_pred -----------------------------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh
Q 018348 77 -----------------------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR 127 (357)
Q Consensus 77 -----------------------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~ 127 (357)
...||..|+|||.+.+..++.++||||||+++|+|++|..|+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~ 241 (316)
T cd05574 162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETF 241 (316)
T ss_pred cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHH
Confidence 235678899999998888899999999999999999999988654322211
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCC----hhhHHH
Q 018348 128 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----PKSLVT 174 (357)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~i~~ 174 (357)
...... ..........+..+.+++.+||+.+|++||+ +.+++.
T Consensus 242 ~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 242 SNILKK----EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHhcC----CccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 111111 1111111124678999999999999999999 666655
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=206.29 Aligned_cols=172 Identities=20% Similarity=0.321 Sum_probs=132.6
Q ss_pred CCCccHHhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC
Q 018348 1 MPNETLAKHLFHWET-------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~ 73 (357)
+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++++|||+++...
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~ 168 (275)
T cd05046 90 TDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLSKDVY 168 (275)
T ss_pred cCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEcccccccccC
Confidence 468999999964331 26999999999999999999999999 9999999999999999999999999876433
Q ss_pred CC-----CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchh
Q 018348 74 DG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 147 (357)
Q Consensus 74 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (357)
.. ....++..|++||.+.+...+.++||||||+++++|++ |..|+........... ..........+..+
T Consensus 169 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~ 244 (275)
T cd05046 169 NSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNR----LQAGKLELPVPEGC 244 (275)
T ss_pred cccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHH----HHcCCcCCCCCCCC
Confidence 22 12235677999999988788899999999999999998 5556543222111111 11011111223345
Q ss_pred HHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 148 GTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 148 ~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
+..+.+++.+||+.+|++||++.+++..|.
T Consensus 245 ~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 245 PSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 678999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-27 Score=210.39 Aligned_cols=159 Identities=23% Similarity=0.337 Sum_probs=123.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-----CccCCCCCCchhh
Q 018348 15 THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEY 89 (357)
Q Consensus 15 ~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-----~~~gt~~y~aPE~ 89 (357)
+-.|++.++.-++.|++.||+|+|+++ |+|||||.+|||||.+|.+||+|||+++++.... ..+-|++|.|||+
T Consensus 212 ~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPEL 290 (560)
T KOG0600|consen 212 GVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPEL 290 (560)
T ss_pred CcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHH
Confidence 347999999999999999999999999 9999999999999999999999999999776543 2345899999999
Q ss_pred hcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-------------cccccc-cccc--CCC-------Cc
Q 018348 90 LRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------------LQMLTD-SCLE--GQF-------TD 145 (357)
Q Consensus 90 ~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-------------~~~~~~-~~~~--~~~-------~~ 145 (357)
+.+. .|+.+.|+||.|||+.||++|++.+++.......... ...+.. ..+. ..+ -.
T Consensus 291 LLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~ 370 (560)
T KOG0600|consen 291 LLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFK 370 (560)
T ss_pred hcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhc
Confidence 9984 6999999999999999999999877653211100000 001110 0000 011 12
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..+....+|+..+|..||++|.|+.+++.
T Consensus 371 ~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 371 DFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 24567889999999999999999998875
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-27 Score=210.38 Aligned_cols=168 Identities=22% Similarity=0.277 Sum_probs=132.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 100 ~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 175 (297)
T cd06659 100 LQGGALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 175 (297)
T ss_pred CCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhccccccccc
Confidence 47899999873 457899999999999999999999999 999999999999999999999999988654432 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|+|||.+.+..++.++|+||||+++++|++|..|+........... ....... ........+..+.+++.
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~i~ 252 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPP--KLKNAHKISPVLRDFLE 252 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HhccCCC--CccccCCCCHHHHHHHH
Confidence 34578999999999888889999999999999999999988754322111110 0110000 01112234567899999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+||+.+|.+||++.++++.
T Consensus 253 ~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 253 RMLTREPQERATAQELLDH 271 (297)
T ss_pred HHhcCCcccCcCHHHHhhC
Confidence 9999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-27 Score=211.02 Aligned_cols=170 Identities=26% Similarity=0.391 Sum_probs=131.4
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC----CCCC
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~----~~~~ 77 (357)
++++|.++|. ..+.+++..+..++.|+++||.+||+.+ ++|+||||+||+++.++.++|+|||.+.... ....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred cccccccccc--cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 5679999996 4678999999999999999999999999 9999999999999999999999999987531 1224
Q ss_pred ccCCCCCCchhhhc-CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccccc-ccccCCCCchhHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD-SCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 78 ~~gt~~y~aPE~~~-~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li 155 (357)
..++..|+|||++. +...+.++||||+|+++++|++|..|+.................. ..............+.+++
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 237 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLI 237 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHH
Confidence 56788999999998 678899999999999999999999887654111111111000000 0001111112237899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.||++|||+.+++.
T Consensus 238 ~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 238 KKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHSSSSGGGSTTHHHHHT
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999875
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.3e-27 Score=206.09 Aligned_cols=166 Identities=17% Similarity=0.205 Sum_probs=130.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC------
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~------ 74 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 88 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 164 (265)
T cd06652 88 MPGGSIKDQLK--SYGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGT 164 (265)
T ss_pred cCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCcccccccccccccc
Confidence 47899999996 3356899999999999999999999999 99999999999999999999999998875432
Q ss_pred -CCCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 75 -GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 75 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
.....++..|+|||++.+...+.++||||||+++|+|++|+.|+.............. .......+......+.+
T Consensus 165 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 240 (265)
T cd06652 165 GMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT----QPTNPVLPPHVSDHCRD 240 (265)
T ss_pred ccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc----CCCCCCCchhhCHHHHH
Confidence 1234578899999999888889999999999999999999988754322111111111 11112234445567889
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++++|+. +|++||++.+|+.
T Consensus 241 ~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 241 FLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred HHHHHhc-ChhhCCCHHHHhc
Confidence 9999994 9999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=208.48 Aligned_cols=169 Identities=16% Similarity=0.199 Sum_probs=129.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|..++.. ....+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 91 ~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 168 (292)
T cd06644 91 CPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRD 168 (292)
T ss_pred CCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccceeccccccccc
Confidence 478899888753 3467999999999999999999999999 999999999999999999999999987653322 2
Q ss_pred CccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...++..|++||++.+ ..++.++|+||||+++|+|++|..|+............... ..+ ....+..++..+
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~ 245 (292)
T cd06644 169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-EPP--TLSQPSKWSMEF 245 (292)
T ss_pred eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC-CCc--cCCCCcccCHHH
Confidence 3457889999999853 34678999999999999999999887543221111111111 010 111233455789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+||+.+|++||++.+++.
T Consensus 246 ~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 246 RDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHHHHHHhcCCcccCcCHHHHhc
Confidence 99999999999999999999875
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-27 Score=207.20 Aligned_cols=170 Identities=14% Similarity=0.160 Sum_probs=130.9
Q ss_pred CCCccHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--- 75 (357)
+++++|.+++.... +..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~ 169 (275)
T cd06608 91 CGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGR 169 (275)
T ss_pred CCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceecccchhh
Confidence 46889999986433 568999999999999999999999999 999999999999999999999999987654332
Q ss_pred -CCccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHH
Q 018348 76 -KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
....++..|+|||++.. ..++.++||||||+++++|++|..|+................. .....+...+.
T Consensus 170 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 246 (275)
T cd06608 170 RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP---PTLKSPENWSK 246 (275)
T ss_pred hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCC---CCCCchhhcCH
Confidence 23457889999998864 2467799999999999999999988754322111111111111 01111223557
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+.+++++||+.||++|||+.+++.
T Consensus 247 ~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 247 KFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HHHHHHHHHhhcChhhCcCHHHHhc
Confidence 8999999999999999999999875
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.3e-27 Score=212.83 Aligned_cols=172 Identities=17% Similarity=0.183 Sum_probs=127.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (331)
T cd05597 83 YVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS 160 (331)
T ss_pred CCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence 479999999953 3567999999999999999999999999 9999999999999999999999999986544322
Q ss_pred -CccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 77 -SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...||..|+|||++.. ..++.++|||||||++|+|++|+.||...................... .....++..
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~ 239 (331)
T cd05597 161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFP-PDVTDVSEE 239 (331)
T ss_pred cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCC-CccCCCCHH
Confidence 2358999999999873 346789999999999999999999886543322211111110000011 111234578
Q ss_pred HHHHHHHhhhcCCC--CCCChhhHHHH
Q 018348 151 LVRLASRCLQYEPR--ERPNPKSLVTA 175 (357)
Q Consensus 151 l~~li~~cl~~~p~--~Rps~~~i~~~ 175 (357)
+.+++++|+..++. .|+++.+++..
T Consensus 240 ~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 240 AKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHHccCcccccCCCCHHHHhcC
Confidence 89999998865333 36788777664
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-27 Score=208.46 Aligned_cols=171 Identities=20% Similarity=0.321 Sum_probs=131.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~ 77 (357)
+++++|.+++... ...+++..+..++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 158 (265)
T cd06605 81 MDGGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT 158 (265)
T ss_pred cCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc
Confidence 3678999999642 2789999999999999999999999 88 999999999999999999999999987654322 22
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh-hccccccccccccCCCCch-hHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-DRNLQMLTDSCLEGQFTDD-DGTELVRLA 155 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~~li 155 (357)
..++..|++||.+.+..++.++|+||||+++++|++|..|+......... .......... .....+.. ++..+.++|
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li 237 (265)
T cd06605 159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPPRLPSGKFSPDFQDFV 237 (265)
T ss_pred ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCCCCChhhcCHHHHHHH
Confidence 56788999999998888999999999999999999999887543100000 0000000000 01111222 557899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||..+|++||++.+++.
T Consensus 238 ~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 238 NLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHcCCCchhCcCHHHHhh
Confidence 9999999999999999875
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-27 Score=205.19 Aligned_cols=169 Identities=21% Similarity=0.271 Sum_probs=136.5
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHh-----cCCCceecCCCCCCeeeCCCCCeEEecCCCccccC
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCT-----SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH-----~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~ 73 (357)
+++|+|.+++... ...++++..++.++.+++.||.||| +.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~~~ 161 (265)
T cd08217 83 CEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKILG 161 (265)
T ss_pred ccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEeccccccccc
Confidence 3688999999643 2468999999999999999999999 888 9999999999999999999999999988765
Q ss_pred CCC----CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHH
Q 018348 74 DGK----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 74 ~~~----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
... ...++..|++||.+.+...+.++|+||||+++++|++|..|+............... .....+...+.
T Consensus 162 ~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 236 (265)
T cd08217 162 HDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG-----KFRRIPYRYSS 236 (265)
T ss_pred CCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC-----CCCCCccccCH
Confidence 433 346788999999998888899999999999999999999887654322221111111 11223445567
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
.+.+++.+||+.+|++||++.+|++.
T Consensus 237 ~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 237 ELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhhC
Confidence 89999999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-27 Score=208.69 Aligned_cols=168 Identities=21% Similarity=0.316 Sum_probs=127.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CCc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~~ 78 (357)
+++|+|..+. .+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ...
T Consensus 81 ~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 153 (279)
T cd06619 81 MDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTY 153 (279)
T ss_pred CCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCC
Confidence 3677776543 5788899999999999999999999 999999999999999999999999998765433 345
Q ss_pred cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh---hccccccccccccCCCCchhHHHHHHHH
Q 018348 79 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---DRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
.++..|+|||++.+..++.++|+||||+++|+|++|+.||......... ....................++.+.+++
T Consensus 154 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 233 (279)
T cd06619 154 VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFI 233 (279)
T ss_pred CCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHH
Confidence 6889999999999888999999999999999999999887542111000 0000000000001111122446899999
Q ss_pred HHhhhcCCCCCCChhhHHHH
Q 018348 156 SRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~~ 175 (357)
.+||+.+|++||++.+++..
T Consensus 234 ~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 234 TQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHhhCChhhCCCHHHHhcC
Confidence 99999999999999998863
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-27 Score=211.21 Aligned_cols=171 Identities=16% Similarity=0.266 Sum_probs=122.3
Q ss_pred CccHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee----CCCCCeEEecCCCccc
Q 018348 3 NETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKN 71 (357)
Q Consensus 3 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill----~~~~~~kl~dfg~~~~ 71 (357)
+++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++ +.++.+||+|||+++.
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 35666666321 1235899999999999999999999999 9999999999999 5667899999999876
Q ss_pred cCCC-------CCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhh---------------
Q 018348 72 SRDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD--------------- 128 (357)
Q Consensus 72 ~~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~--------------- 128 (357)
.... ....+|..|+|||.+.+. .++.++|||||||++|||+||..||..........
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 5432 234578899999998764 57899999999999999999998875321100000
Q ss_pred -----cccccc---------cc---------ccc---cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 129 -----RNLQML---------TD---------SCL---EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 129 -----~~~~~~---------~~---------~~~---~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...... .. ... ...........+.+++.+||+.||.+|||+.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 000000 00 000 00001112346888999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-27 Score=213.75 Aligned_cols=171 Identities=16% Similarity=0.178 Sum_probs=128.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 160 (331)
T cd05624 83 YVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS 160 (331)
T ss_pred CCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence 479999999963 3467999999999999999999999999 9999999999999999999999999987654332
Q ss_pred -CccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 77 -SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...||..|+|||++.+ +.++.++|+||||+++|+|++|+.||.....................+ ......+..
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~~~~~~ 239 (331)
T cd05624 161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP-SHITDVSEE 239 (331)
T ss_pred ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCC-CccccCCHH
Confidence 2468999999999875 457889999999999999999999886543322211111110000011 111234578
Q ss_pred HHHHHHHhhhcCCCC--CCChhhHHH
Q 018348 151 LVRLASRCLQYEPRE--RPNPKSLVT 174 (357)
Q Consensus 151 l~~li~~cl~~~p~~--Rps~~~i~~ 174 (357)
+.+++.+|+..++.+ |+++.+++.
T Consensus 240 ~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 240 AKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred HHHHHHHHccCchhhcCCCCHHHHhc
Confidence 999999999865543 356666654
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=214.92 Aligned_cols=164 Identities=19% Similarity=0.262 Sum_probs=134.0
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccCCCC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 83 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~gt~~ 83 (357)
||-.|.|. ...+++.+-++..|..+.+.||+|||+.+ .||||||..|||+++.|.|||+|||.+....+..+++||+.
T Consensus 110 GSAsDlle-VhkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPy 187 (948)
T KOG0577|consen 110 GSASDLLE-VHKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPY 187 (948)
T ss_pred ccHHHHHH-HHhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCCcc
Confidence 56667663 34678999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCchhhhcC---CCCCCcccchhHHHHHHHHHcCCCCCCcch-hHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 84 FTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 84 y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
|||||++.- +.|+.++||||||+++.||.-+++|..... ...+. .+.....+-......+..+..++..||
T Consensus 188 wMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY-----HIAQNesPtLqs~eWS~~F~~Fvd~CL 262 (948)
T KOG0577|consen 188 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-----HIAQNESPTLQSNEWSDYFRNFVDSCL 262 (948)
T ss_pred ccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH-----HHHhcCCCCCCCchhHHHHHHHHHHHH
Confidence 999999854 689999999999999999999886643321 11111 111111111224567789999999999
Q ss_pred hcCCCCCCChhhHHH
Q 018348 160 QYEPRERPNPKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rps~~~i~~ 174 (357)
+.-|.+|||..+++.
T Consensus 263 qKipqeRptse~ll~ 277 (948)
T KOG0577|consen 263 QKIPQERPTSEELLK 277 (948)
T ss_pred hhCcccCCcHHHHhh
Confidence 999999999977654
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=215.36 Aligned_cols=117 Identities=17% Similarity=0.261 Sum_probs=103.6
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC--CCeEEecCCCccccCCCC-Ccc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED--GNPRLSTFGLMKNSRDGK-SYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~--~~~kl~dfg~~~~~~~~~-~~~ 79 (357)
.-+|+++|...+-.+|+...+..++.||+.||.+||+.+ |||+||||+||||... ..+||+|||++....+.. +.+
T Consensus 271 ~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYi 349 (586)
T KOG0667|consen 271 STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYI 349 (586)
T ss_pred hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCCcceeee
Confidence 357999997666678999999999999999999999999 9999999999999644 469999999988766554 445
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCc
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~ 120 (357)
-++.|.|||++.+.+++.+.|+||||||+.||++|.+.|++
T Consensus 350 QSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 350 QSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred eccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 68899999999999999999999999999999999887765
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-27 Score=205.78 Aligned_cols=167 Identities=20% Similarity=0.266 Sum_probs=132.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
++||+|.+++. +...+++..+..++.|++.||.|||+.+ ++|+||+|.||+++.++.++|+|||++...... ..
T Consensus 75 ~~~~~L~~~l~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~ 151 (262)
T cd05572 75 CLGGELWTILR--DRGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT 151 (262)
T ss_pred CCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCccccccc
Confidence 47899999996 3456899999999999999999999999 999999999999999999999999998766543 23
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcch--hHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
..++..|++||.+.+..++.++|+||||+++|+|++|..|+.... ....... .........++...+..+.+++
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i 227 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYND----ILKGNGKLEFPNYIDKAAKDLI 227 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHH----HhccCCCCCCCcccCHHHHHHH
Confidence 457889999999987788999999999999999999998876543 1111111 1111112233444467899999
Q ss_pred HHhhhcCCCCCCC-----hhhHHH
Q 018348 156 SRCLQYEPRERPN-----PKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps-----~~~i~~ 174 (357)
.+||+.+|++||+ +.++++
T Consensus 228 ~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 228 KQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHccCChhhCcCCcccCHHHHhc
Confidence 9999999999999 555554
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9e-27 Score=209.30 Aligned_cols=165 Identities=21% Similarity=0.334 Sum_probs=137.9
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC-CCCCeEEecCCCccccCCCC---C
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDGK---S 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~-~~~~~kl~dfg~~~~~~~~~---~ 77 (357)
.+|+|+|||.+ ....+++....+++.||+.|+.|+|... +|||||||+||++- .-|.|||.|||++..+.++. +
T Consensus 100 D~GDl~DyImK-He~Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 100 DGGDLFDYIMK-HEEGLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred CCchHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence 47899999975 4578999999999999999999999998 99999999998874 66999999999998887764 6
Q ss_pred ccCCCCCCchhhhcCCCCC-CcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~-~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
.+|++.|-|||.+.+..|+ ++.|||||||++|-|++|+.||......+ .+..+.+. ....|...+.++.+||.
T Consensus 178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE----TLTmImDC--KYtvPshvS~eCrdLI~ 251 (864)
T KOG4717|consen 178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE----TLTMIMDC--KYTVPSHVSKECRDLIQ 251 (864)
T ss_pred ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh----hhhhhhcc--cccCchhhhHHHHHHHH
Confidence 7899999999999988774 58999999999999999998875432211 12222322 23456677889999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
.||+.||.+|-|.++|..
T Consensus 252 sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 252 SMLVRDPKKRASLEEIVS 269 (864)
T ss_pred HHHhcCchhhccHHHHhc
Confidence 999999999999999875
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=204.54 Aligned_cols=168 Identities=17% Similarity=0.243 Sum_probs=131.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC------
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~------ 74 (357)
++||+|.+++. +.+++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 84 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (265)
T cd06631 84 VPGGSISSILN--RFGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT 160 (265)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence 47899999996 3457899999999999999999999999 99999999999999999999999998765421
Q ss_pred ----CCCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 75 ----GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 75 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
.....++..|+|||++.+..++.++|+||||+++++|++|..|+........... ... ........+...+..
T Consensus 161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~ 237 (265)
T cd06631 161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY-IGA--HRGLMPRLPDSFSAA 237 (265)
T ss_pred ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH-hhh--ccCCCCCCCCCCCHH
Confidence 1123578899999999988889999999999999999999988754221110000 000 000111233445678
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHH
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+++++||+.+|++||++.+++.
T Consensus 238 ~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 238 AIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred HHHHHHHHhcCCcccCCCHHHHhc
Confidence 999999999999999999998875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=203.78 Aligned_cols=169 Identities=20% Similarity=0.206 Sum_probs=137.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC------
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~------ 74 (357)
.|||+|...+..+.++.+++..+.-++.+|+-||+|||..| ||+|||||+||||.++|.+.|+||.++.....
T Consensus 159 CpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~ 237 (459)
T KOG0610|consen 159 CPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVK 237 (459)
T ss_pred CCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeec
Confidence 48999999998878899999999999999999999999999 99999999999999999999999987442110
Q ss_pred -----------------------------C-------------------------CCccCCCCCCchhhhcCCCCCCccc
Q 018348 75 -----------------------------G-------------------------KSYSTNLAFTPPEYLRTGRVTPESV 100 (357)
Q Consensus 75 -----------------------------~-------------------------~~~~gt~~y~aPE~~~~~~~~~~~D 100 (357)
. .+++||-.|+|||++++...+.+.|
T Consensus 238 s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVD 317 (459)
T KOG0610|consen 238 SSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVD 317 (459)
T ss_pred cCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhh
Confidence 0 0135788999999999999999999
Q ss_pred chhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCC----hhhHHH
Q 018348 101 IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----PKSLVT 174 (357)
Q Consensus 101 i~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~i~~ 174 (357)
.|+|||++|||+.|.-||.+......- ..++...+.-.-.+..+..+.+||++.|.+||.+|.. +.||.+
T Consensus 318 WWtfGIflYEmLyG~TPFKG~~~~~Tl----~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 318 WWTFGIFLYEMLYGTTPFKGSNNKETL----RNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred HHHHHHHHHHHHhCCCCcCCCCchhhH----HHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 999999999999999999876544322 2222222222222255678999999999999999987 777765
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=208.59 Aligned_cols=173 Identities=22% Similarity=0.290 Sum_probs=129.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++++|||.+......
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 46899999997544567899999999999999999999999 999999999999999999999999987543221
Q ss_pred ------CCccCCCCCCchhhhcCC--CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh-hc---ccccc---------
Q 018348 76 ------KSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-DR---NLQML--------- 134 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~-~~---~~~~~--------- 134 (357)
....++..|+|||.+.+. .++.++|+||||+++|+|++|..||......... .. .....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 123456789999998763 4788999999999999999999887643211100 00 00000
Q ss_pred -----------cc----ccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 135 -----------TD----SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 135 -----------~~----~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.. .......+......+.+++.+||+.||++|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00 00011112234567889999999999999999999886
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=202.06 Aligned_cols=169 Identities=22% Similarity=0.281 Sum_probs=133.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
+++++|.+++.. ....+++..+..++.+++.||.|||..+ ++||||+|.||+++.++.++|+|||.+...... ..
T Consensus 79 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 156 (253)
T cd05122 79 CSGGSLKDLLKS-TNQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT 156 (253)
T ss_pred CCCCcHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeeccccccccccccccc
Confidence 468999999964 2368999999999999999999999999 999999999999999999999999998776554 34
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
..++..|++||.+.+...+.++|+||||+++++|++|..|+................. +.. ..+..++..+.+++.+
T Consensus 157 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~i~~ 233 (253)
T cd05122 157 MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP-PGL--RNPEKWSDEFKDFLKK 233 (253)
T ss_pred eecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC-CCc--CcccccCHHHHHHHHH
Confidence 5678899999999888889999999999999999999988765421111111111100 000 1111225789999999
Q ss_pred hhhcCCCCCCChhhHHH
Q 018348 158 CLQYEPRERPNPKSLVT 174 (357)
Q Consensus 158 cl~~~p~~Rps~~~i~~ 174 (357)
||+.||++|||+.+++.
T Consensus 234 ~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 234 CLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HccCChhhCCCHHHHhc
Confidence 99999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-27 Score=208.07 Aligned_cols=172 Identities=20% Similarity=0.338 Sum_probs=133.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~ 77 (357)
+++|+|.+++. +.+++++..+..++.+++.||.|||+. + ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~ 161 (284)
T cd06620 85 MDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT 161 (284)
T ss_pred CCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence 47899999985 356799999999999999999999974 6 999999999999999999999999987654322 23
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh----h---ccccccccccccCCCC-chhHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----D---RNLQMLTDSCLEGQFT-DDDGT 149 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~-~~~~~ 149 (357)
..|+..|+|||++.+..++.++|+|||||++|+|++|..|+......... . .......... ....+ ..++.
T Consensus 162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 240 (284)
T cd06620 162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLPSSDFPE 240 (284)
T ss_pred cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCCchhcCH
Confidence 46889999999998888899999999999999999999887643221000 0 0001111111 11111 22557
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHHHh
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVTAL 176 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~~L 176 (357)
.+.+++.+||+.||++|||+.+++...
T Consensus 241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 241 DLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 899999999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=207.23 Aligned_cols=164 Identities=20% Similarity=0.263 Sum_probs=131.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-Ccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-~~~ 79 (357)
+++|+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++|+||+|.||+++.++.++|+|||++....... ...
T Consensus 83 ~~~~~L~~~~~--~~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 159 (290)
T cd05580 83 VPGGELFSHLR--KSGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLC 159 (290)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCC
Confidence 46899999996 3468999999999999999999999999 9999999999999999999999999987765442 345
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
++..|++||.+.+...+.++|+||||+++|+|++|..|+............... ....+...+..+.+++.+||
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l 233 (290)
T cd05580 160 GTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG------KVRFPSFFSPDAKDLIRNLL 233 (290)
T ss_pred CCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CccCCccCCHHHHHHHHHHc
Confidence 788999999998778889999999999999999999887654322211111110 11233344578999999999
Q ss_pred hcCCCCCC-----ChhhHH
Q 018348 160 QYEPRERP-----NPKSLV 173 (357)
Q Consensus 160 ~~~p~~Rp-----s~~~i~ 173 (357)
+.||.+|+ ++.+++
T Consensus 234 ~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 234 QVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred cCCHHHccCcccCCHHHHH
Confidence 99999998 555554
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-27 Score=215.41 Aligned_cols=173 Identities=23% Similarity=0.325 Sum_probs=146.6
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCcc--
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS-- 79 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~-- 79 (357)
|-|-|..||.. +...++..+...++.||+.+|.|||++. +|||||-.+|||+...-+||++|||+++...+...+.
T Consensus 473 ~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS 550 (974)
T KOG4257|consen 473 PLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS 550 (974)
T ss_pred cchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence 56889999953 5678999999999999999999999999 9999999999999999999999999999887765332
Q ss_pred -C--CCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 80 -T--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 80 -g--t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
| ...|||||.+....++.+||||-|||.+||++. |..||.+- +...+.......-+.+.|+.|++.+..|+
T Consensus 551 ~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgv-----kNsDVI~~iEnGeRlP~P~nCPp~LYslm 625 (974)
T KOG4257|consen 551 RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGV-----KNSDVIGHIENGERLPCPPNCPPALYSLM 625 (974)
T ss_pred ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccc-----cccceEEEecCCCCCCCCCCCChHHHHHH
Confidence 2 356999999999999999999999999999874 66777543 22333344445556678899999999999
Q ss_pred HHhhhcCCCCCCChhhHHHHhccccc
Q 018348 156 SRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
.+||..+|.+||.+.+|...|..+..
T Consensus 626 skcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 626 SKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHHhccCcccCCcHHHHHHHHHHHHH
Confidence 99999999999999999999876654
|
|
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=203.91 Aligned_cols=167 Identities=22% Similarity=0.265 Sum_probs=132.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
++|++|.+++. +.+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 84 ~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 160 (258)
T cd06632 84 VPGGSLAKLLK--KYGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS 160 (258)
T ss_pred cCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence 47899999996 3457899999999999999999999999 999999999999999999999999987764433 23
Q ss_pred ccCCCCCCchhhhcCCC-CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
..++..|++||.+.... ++.++|+||||+++|+|++|..|+............. ........+..+++.+.+++.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~ 236 (258)
T cd06632 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIG----RSKELPPIPDHLSDEAKDFIL 236 (258)
T ss_pred cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHH----hcccCCCcCCCcCHHHHHHHH
Confidence 45788899999987665 8899999999999999999998875433111110000 000112234445678999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.+|++||++.+++.
T Consensus 237 ~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 237 KCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHhhcCcccCcCHHHHhc
Confidence 999999999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=207.18 Aligned_cols=170 Identities=18% Similarity=0.226 Sum_probs=126.4
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----Cc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----~~ 78 (357)
+|+|.+++.. ..+.+++..+..++.||++||.|||+.+ ++|+||||+||+++.++.++|+|||+++...... ..
T Consensus 82 ~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (284)
T cd07839 82 DQDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAE 159 (284)
T ss_pred CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCC
Confidence 4678887753 3567999999999999999999999999 9999999999999999999999999987654321 23
Q ss_pred cCCCCCCchhhhcCCC-CCCcccchhHHHHHHHHHcCCCCCCcchh-HHhhhcc--------------ccccccc----c
Q 018348 79 STNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRN--------------LQMLTDS----C 138 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~~~~~~~~-~~~~~~~--------------~~~~~~~----~ 138 (357)
.++..|+|||++.+.. ++.++||||||+++|+|++|..|+..... ....... ....... .
T Consensus 160 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07839 160 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPM 239 (284)
T ss_pred ccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCC
Confidence 5678999999987644 68899999999999999999877532111 1000000 0000000 0
Q ss_pred cc-----CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 139 LE-----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 139 ~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.. ....+..+..+.+++++||+.||.+|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 240 YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00 0111234578899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=206.98 Aligned_cols=166 Identities=19% Similarity=0.219 Sum_probs=129.9
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccCCCC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 83 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~gt~~ 83 (357)
|+|.+++.. ..+++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........++..
T Consensus 99 g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 176 (307)
T cd06607 99 GSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPY 176 (307)
T ss_pred CCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCcc
Confidence 567776642 3457999999999999999999999999 99999999999999999999999999887666666678889
Q ss_pred CCchhhhc---CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhh
Q 018348 84 FTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 160 (357)
Q Consensus 84 y~aPE~~~---~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 160 (357)
|+|||++. .+.++.++||||||+++|+|++|..|+............... ......+..++..+.+++.+||+
T Consensus 177 y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~ 252 (307)
T cd06607 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----DSPTLSSNDWSDYFRNFVDSCLQ 252 (307)
T ss_pred ccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC----CCCCCCchhhCHHHHHHHHHHhc
Confidence 99999874 345788999999999999999999877543221111100000 00111122355789999999999
Q ss_pred cCCCCCCChhhHHHH
Q 018348 161 YEPRERPNPKSLVTA 175 (357)
Q Consensus 161 ~~p~~Rps~~~i~~~ 175 (357)
.+|++||++.+|+..
T Consensus 253 ~~p~~Rp~~~~il~~ 267 (307)
T cd06607 253 KIPQDRPSSEELLKH 267 (307)
T ss_pred CChhhCcCHHHHhcC
Confidence 999999999999863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=206.08 Aligned_cols=171 Identities=19% Similarity=0.315 Sum_probs=131.7
Q ss_pred CCCccHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--C
Q 018348 1 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~ 76 (357)
+++++|.+++.... ...+++..+..++.+++.||.|||+. + ++|+||||+||+++.++.++|+|||++...... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK 159 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc
Confidence 47899999885321 34799999999999999999999975 6 999999999999999999999999998765332 2
Q ss_pred CccCCCCCCchhhhcCCC------CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 77 SYSTNLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~------~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...++..|++||.+.+.. ++.++|+|||||++|+|++|..|+........... ...+.. ......+..++..
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~ 237 (286)
T cd06622 160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ-LSAIVD-GDPPTLPSGYSDD 237 (286)
T ss_pred cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH-HHHHhh-cCCCCCCcccCHH
Confidence 345788999999986543 47899999999999999999988754322211111 011111 1112334456688
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHH
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+++.+||+.+|++||++.+++.
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 238 AQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHHHHHHcccCcccCCCHHHHhc
Confidence 999999999999999999999886
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=228.00 Aligned_cols=169 Identities=20% Similarity=0.215 Sum_probs=127.7
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC------CceecCCCCCCeeeCC---------------
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG------RALYHDLNAYRILFDE--------------- 57 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~------~~~H~dlk~~Nill~~--------------- 57 (357)
+++|+|.++|... ..+.+++..++.|+.||+.||.|||..+ +||||||||+||||+.
T Consensus 96 ~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ 175 (1021)
T PTZ00266 96 CDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNL 175 (1021)
T ss_pred CCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccccccc
Confidence 4789999999642 2367999999999999999999999842 2999999999999954
Q ss_pred --CCCeEEecCCCccccCCC---CCccCCCCCCchhhhcC--CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc
Q 018348 58 --DGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 130 (357)
Q Consensus 58 --~~~~kl~dfg~~~~~~~~---~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~ 130 (357)
.+.+||+|||++...... ....||+.|+|||++.+ ..++.++||||||||+|+|++|..||............
T Consensus 176 ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~ 255 (1021)
T PTZ00266 176 NGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISE 255 (1021)
T ss_pred CCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHH
Confidence 345899999998765433 23468999999999865 34788999999999999999999888543211100000
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 131 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..... . ......+..+.+||..||+.+|.+||++.+++.
T Consensus 256 lk~~p--~---lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 256 LKRGP--D---LPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HhcCC--C---CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 11100 0 011223578999999999999999999999874
|
|
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=205.55 Aligned_cols=169 Identities=17% Similarity=0.241 Sum_probs=130.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.. ..+++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 84 CDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred cCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 478999999853 3467999999999999999999999999 999999999999999999999999987654322 2
Q ss_pred CccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...++..|++||.+.. ..++.++|+||||+++|+|++|..|+............... ..+ ....+..++..+
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~ 238 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS-EPP--TLDQPSKWSSSF 238 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC-CCC--CcCCcccCCHHH
Confidence 3457889999999853 34678999999999999999999887654222111111110 000 111233455789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+||+.+|.+||++.+++.
T Consensus 239 ~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 239 NDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred HHHHHHHhccChhhCcCHHHHhc
Confidence 99999999999999999999876
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-26 Score=203.40 Aligned_cols=165 Identities=18% Similarity=0.273 Sum_probs=130.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++|++|.+++. .+.+++..++.++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06917 84 AEGGSVRTLMK---AGPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRS 159 (277)
T ss_pred CCCCcHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccc
Confidence 46899999984 348999999999999999999999999 9999999999999999999999999887654332
Q ss_pred CccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCc-hhHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD-DDGTELVRL 154 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l 154 (357)
...|+..|+|||.+.++ .++.++|+||||+++|+|++|..|+............ ..... ...+. ..+..+.++
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~ 234 (277)
T cd06917 160 TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI-PKSKP----PRLEDNGYSKLLREF 234 (277)
T ss_pred cccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc-ccCCC----CCCCcccCCHHHHHH
Confidence 34578889999998754 4688999999999999999999887654322111111 11111 11111 245789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+||+.||++||++.+++.
T Consensus 235 i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 235 VAACLDEEPKERLSAEELLK 254 (277)
T ss_pred HHHHcCCCcccCcCHHHHhh
Confidence 99999999999999999976
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=202.65 Aligned_cols=167 Identities=22% Similarity=0.330 Sum_probs=130.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++++|.+++. .++.+++..+..++.+++.||.|||+.+ ++|+||+|.||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 81 CSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred CCCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 46899999996 3456899999999999999999999999 9999999999999999999999999887654322
Q ss_pred ----CccCCCCCCchhhhcCCC---CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCc--hh
Q 018348 77 ----SYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD--DD 147 (357)
Q Consensus 77 ----~~~gt~~y~aPE~~~~~~---~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 147 (357)
...++..|++||++.+.. .+.++||||||++++++++|..||................ .....+. .+
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 233 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAG----HKPPIPDSLQL 233 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcC----CCCCCCccccc
Confidence 234678999999998765 7889999999999999999998875431111000000010 1111222 23
Q ss_pred HHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 148 GTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 148 ~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+..+.+++.+||+.+|++||++.+++.
T Consensus 234 ~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 234 SPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 578899999999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=205.90 Aligned_cols=171 Identities=18% Similarity=0.272 Sum_probs=128.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++++|..++. ....+++..+..++.|++.||.|||+.+ ++|+||||.||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 46778887764 3457999999999999999999999999 9999999999999999999999999987654432
Q ss_pred CccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhc-------c-------------ccccc
Q 018348 77 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-------N-------------LQMLT 135 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~-------~-------------~~~~~ 135 (357)
...++..|++||.+.+ ..++.++|+||||+++|+|++|..||........... . .....
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3456788999999876 4578899999999999999999988764321110000 0 00000
Q ss_pred cccccCC-----CCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 DSCLEGQ-----FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 ~~~~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+..... .....+..+.+++.+||+.+|++||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000000 01123567899999999999999999998875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=206.14 Aligned_cols=168 Identities=19% Similarity=0.294 Sum_probs=131.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
++||+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 75 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 153 (277)
T cd05577 75 MNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKG 153 (277)
T ss_pred CCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccc
Confidence 46899999997544457999999999999999999999999 999999999999999999999999988765432 23
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
..++..|++||.+.+..++.++|+||||+++++|++|+.|+.................. .....+...++.+.+++.+
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~ 231 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE--MAVEYPDKFSPEAKDLCEA 231 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc--ccccCCccCCHHHHHHHHH
Confidence 35678899999998878899999999999999999999887543221000000011110 1122344456789999999
Q ss_pred hhhcCCCCCCChhh
Q 018348 158 CLQYEPRERPNPKS 171 (357)
Q Consensus 158 cl~~~p~~Rps~~~ 171 (357)
||+.+|++||++++
T Consensus 232 ~l~~~p~~R~~~~~ 245 (277)
T cd05577 232 LLQKDPEKRLGCRG 245 (277)
T ss_pred HccCChhHccCCCc
Confidence 99999999996555
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=205.30 Aligned_cols=172 Identities=16% Similarity=0.260 Sum_probs=132.3
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--C
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~ 76 (357)
++||+|.+++... ....++...+..++.|++.||.|||+.+ ++|+||+|.||+++.++.++|+|||++...... .
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (287)
T cd06621 83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG 161 (287)
T ss_pred cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeeccccccccccccc
Confidence 4689999887532 3467899999999999999999999999 999999999999999999999999997654332 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh-----HHhhhccccccccccccCCCC--chhHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-----DLIRDRNLQMLTDSCLEGQFT--DDDGT 149 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~ 149 (357)
...++..|++||.+.+..++.++|+||||+++|+|++|..|+..... ...... ......+....... ...++
T Consensus 162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd06621 162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSY-IVNMPNPELKDEPGNGIKWSE 240 (287)
T ss_pred cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHH-HhcCCchhhccCCCCCCchHH
Confidence 34568899999999888899999999999999999999988764311 011000 00111111111111 23457
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+.+++.+||..+|++|||+.+++.
T Consensus 241 ~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 241 EFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHh
Confidence 8999999999999999999999887
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-27 Score=215.95 Aligned_cols=162 Identities=21% Similarity=0.320 Sum_probs=126.8
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee-CCCCCeEEecCCCccccCCC-CCcc
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF-DEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill-~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
.||-|-+.+.. .+.....+..|+.+|+.++.|||+++ +|||||||+|||+ +..|.++|+|||.++..... .+.+
T Consensus 399 ~g~ell~ri~~---~~~~~~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~ 474 (612)
T KOG0603|consen 399 DGGELLRRIRS---KPEFCSEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPA 474 (612)
T ss_pred cccHHHHHHHh---cchhHHHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhhcccc
Confidence 34445555531 22222567789999999999999999 9999999999999 68899999999998876655 2335
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
-|..|.|||++....++.++|+||||+++|+|++|..|+.....+ ..+......+.++...+....+|+++||
T Consensus 475 ~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKdLl~~LL 547 (612)
T KOG0603|consen 475 LTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKDLLQQLL 547 (612)
T ss_pred hhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHHHHHHhc
Confidence 688999999999888999999999999999999999888655443 0111111122333556678999999999
Q ss_pred hcCCCCCCChhhHHH
Q 018348 160 QYEPRERPNPKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rps~~~i~~ 174 (357)
+.||.+||++.++..
T Consensus 548 ~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 548 QVDPALRLGADEIGA 562 (612)
T ss_pred cCChhhCcChhhhcc
Confidence 999999999999875
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=201.88 Aligned_cols=158 Identities=22% Similarity=0.282 Sum_probs=125.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++.. ..++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||.+...... ....
T Consensus 67 ~~~~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~ 143 (237)
T cd05576 67 AEGGKLWSHISK--FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEA 143 (237)
T ss_pred CCCCCHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCC
Confidence 478999999963 456999999999999999999999999 999999999999999999999999987654433 2334
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
++..|++||.+.+..++.++|+||+|+++|+|++|..++...... . .. ......+..+++.+.+++.+||
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~-----~~----~~~~~~~~~~~~~~~~li~~~l 213 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-I-----NT----HTTLNIPEWVSEEARSLLQQLL 213 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-c-----cc----ccccCCcccCCHHHHHHHHHHc
Confidence 567899999998778899999999999999999998664322111 0 00 0011223345578999999999
Q ss_pred hcCCCCCCChhh
Q 018348 160 QYEPRERPNPKS 171 (357)
Q Consensus 160 ~~~p~~Rps~~~ 171 (357)
+.||++||++.+
T Consensus 214 ~~dp~~R~~~~~ 225 (237)
T cd05576 214 QFNPTERLGAGV 225 (237)
T ss_pred cCCHHHhcCCCc
Confidence 999999999743
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=202.11 Aligned_cols=168 Identities=24% Similarity=0.305 Sum_probs=133.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++++|.+++.. .+.+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 151 (265)
T cd05579 75 LPGGDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL 151 (265)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc
Confidence 468899999963 348999999999999999999999999 999999999999999999999999987654322
Q ss_pred -------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCch--
Q 018348 76 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD-- 146 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 146 (357)
....++..|++||.+.....+.++|+||||+++++|++|..|+................. ..+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~ 225 (265)
T cd05579 152 NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI------EWPEDVE 225 (265)
T ss_pred ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc------CCCcccc
Confidence 123467889999999887889999999999999999999988765433222111111100 11112
Q ss_pred hHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 147 DGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 147 ~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
.+..+..++.+||+.+|++||++..+.+.|+
T Consensus 226 ~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 226 VSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 2578999999999999999999977776664
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-27 Score=204.19 Aligned_cols=165 Identities=18% Similarity=0.291 Sum_probs=137.3
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCc
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSY 78 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~ 78 (357)
.+|.|+||+. +.+.|++++...+++||..|+.|+|.+. ++|||||.+|||+|.++++||+|||++..+.+. +++
T Consensus 136 S~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTF 212 (668)
T KOG0611|consen 136 SGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTF 212 (668)
T ss_pred CCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHHHHh
Confidence 4799999996 5789999999999999999999999999 999999999999999999999999998877665 478
Q ss_pred cCCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 79 STNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
+|++.|.+||.+.+.+| ++..|.|||||++|-|+.|..||.+.....+-.. +.....+ .+..+.+..-||++
T Consensus 213 CGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQ----Is~GaYr---EP~~PSdA~gLIRw 285 (668)
T KOG0611|consen 213 CGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQ----ISRGAYR---EPETPSDASGLIRW 285 (668)
T ss_pred cCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHH----hhccccc---CCCCCchHHHHHHH
Confidence 99999999999998876 6799999999999999999999987543322111 1111111 11223567889999
Q ss_pred hhhcCCCCCCChhhHHHHh
Q 018348 158 CLQYEPRERPNPKSLVTAL 176 (357)
Q Consensus 158 cl~~~p~~Rps~~~i~~~L 176 (357)
||-.||++|-|+.+|....
T Consensus 286 mLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 286 MLMVNPERRATIEDIASHW 304 (668)
T ss_pred HHhcCcccchhHHHHhhhh
Confidence 9999999999999987754
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=204.34 Aligned_cols=169 Identities=19% Similarity=0.251 Sum_probs=132.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++|++|.+++... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 97 ~~~~~L~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 174 (286)
T cd06614 97 MDGGSLTDIITQN-FVRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRN 174 (286)
T ss_pred cCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhc
Confidence 3689999999642 248999999999999999999999999 999999999999999999999999987654332 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|++||.+.+..++.++|+||||+++|+|++|..|+.................. ....+..++..+.+++.
T Consensus 175 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~ 251 (286)
T cd06614 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP---PLKNPEKWSPEFKDFLN 251 (286)
T ss_pred cccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC---CCcchhhCCHHHHHHHH
Confidence 345678899999998888899999999999999999999887543322111111111000 01112225578999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.+|.+||++.+|+.
T Consensus 252 ~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 252 KCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHhccChhhCcCHHHHhh
Confidence 999999999999999975
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=209.96 Aligned_cols=169 Identities=18% Similarity=0.303 Sum_probs=127.0
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCcc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~~ 79 (357)
++|.+++.. .+..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 88 ~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 165 (309)
T cd07872 88 KDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEV 165 (309)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCcccccccc
Confidence 578888753 3456899999999999999999999999 999999999999999999999999998754322 2335
Q ss_pred CCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc--------------------cccccc
Q 018348 80 TNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------MLTDSC 138 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~--------------------~~~~~~ 138 (357)
+|..|+|||.+.+ ..++.++||||||+++|+|++|+.||.............. ....+.
T Consensus 166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
T cd07872 166 VTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPK 245 (309)
T ss_pred ccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCc
Confidence 6889999999875 4578899999999999999999988865432111000000 000000
Q ss_pred cc----CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 139 LE----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 139 ~~----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.. ......++..+.+++.+||+.||.+|||+.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 246 YKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred cCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00 0011234567899999999999999999999876
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=203.04 Aligned_cols=169 Identities=17% Similarity=0.285 Sum_probs=128.9
Q ss_pred CCCccHHhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-CCCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPM--KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-~~~~kl~dfg~~~~~~~~-- 75 (357)
+++++|.+++.. ..+++ ++..+..++.|++.||.|||+.+ ++||||||+||+++. ++.++|+|||++......
T Consensus 87 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~ 164 (268)
T cd06624 87 VPGGSLSALLRS-KWGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP 164 (268)
T ss_pred CCCCCHHHHHHH-hcccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhheecccCCC
Confidence 478999999964 22455 88889999999999999999999 999999999999976 678999999987654322
Q ss_pred --CCccCCCCCCchhhhcCCC--CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~--~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
....++..|++||++.... ++.++|+||||+++|+|++|..|+........... .. .........+..++..+
T Consensus 165 ~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~ 241 (268)
T cd06624 165 CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMF--KV-GMFKIHPEIPESLSAEA 241 (268)
T ss_pred ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHh--hh-hhhccCCCCCcccCHHH
Confidence 2235788999999987643 78899999999999999999988753211110000 00 00011123344566789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+||+.+|++|||+.+++.
T Consensus 242 ~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 242 KNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred HHHHHHHcCCCchhCCCHHHHHh
Confidence 99999999999999999999875
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-27 Score=215.96 Aligned_cols=167 Identities=17% Similarity=0.244 Sum_probs=139.3
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCcc--
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS-- 79 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~-- 79 (357)
+.|||.++|++.....|-......++.||+.|+.||.++. +|||||-..|+++-....|||+|||+.+.........
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 6899999998645678888999999999999999999999 9999999999999988999999999999877654321
Q ss_pred -----CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCC-CCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 80 -----TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 80 -----gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
-.+.|+|||.++..+++.+||||+|||++|||+++. .|+.+.....+ -..++..-+...|..|++++.+
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI-----L~~iD~~erLpRPk~csedIY~ 346 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI-----LKNIDAGERLPRPKYCSEDIYQ 346 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH-----HHhccccccCCCCCCChHHHHH
Confidence 257899999999999999999999999999999854 45554332221 1122233445668889999999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++..||..+|.+||+|..|++
T Consensus 347 imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 347 IMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred HHHHhccCCccccccHHHHHH
Confidence 999999999999999999974
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=203.54 Aligned_cols=166 Identities=19% Similarity=0.321 Sum_probs=133.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~--- 76 (357)
+++++|.+++.. ..++++..++.++.|+++||.|||+ .+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 157 (264)
T cd06623 81 MDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC 157 (264)
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence 478999999963 4789999999999999999999999 98 9999999999999999999999999887654332
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcch---hHHhhhccccccccccccCCCCch-hHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNLQMLTDSCLEGQFTDD-DGTEL 151 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 151 (357)
...++..|++||.+....++.++|+||||+++|+|++|..|+.... ......... .. .....+.. ++..+
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~l 232 (264)
T cd06623 158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC----DG-PPPSLPAEEFSPEF 232 (264)
T ss_pred cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh----cC-CCCCCCcccCCHHH
Confidence 2356789999999988888999999999999999999998875442 111111111 11 11122233 56789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++++||+.+|++||++.++++
T Consensus 233 ~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 233 RDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred HHHHHHHccCChhhCCCHHHHHh
Confidence 99999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=205.73 Aligned_cols=170 Identities=20% Similarity=0.228 Sum_probs=126.7
Q ss_pred ccHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 4 ETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 4 gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
|+|.+++.... +..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+|.++|+|||++...... ...
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (285)
T cd07861 83 MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHE 161 (285)
T ss_pred CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCC
Confidence 67888875433 367999999999999999999999999 999999999999999999999999988754332 223
Q ss_pred cCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc--------------------cccccc
Q 018348 79 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------QMLTDS 137 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~--------------------~~~~~~ 137 (357)
.++..|+|||.+.+. .++.++||||||+++++|++|+.|+............. ......
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (285)
T cd07861 162 VVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPK 241 (285)
T ss_pred cccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccc
Confidence 467889999998754 46889999999999999999998875432111000000 000000
Q ss_pred ---cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 138 ---CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 138 ---~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.........+++++.++|++||+.||.+|||+.+|+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 242 WKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred cCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000111234578889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=203.82 Aligned_cols=170 Identities=18% Similarity=0.305 Sum_probs=131.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-CeEEecCCCccccCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-~~kl~dfg~~~~~~~~---- 75 (357)
+++++|.+++. +.+++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++ .++|+|||++......
T Consensus 85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 161 (268)
T cd06630 85 MAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA 161 (268)
T ss_pred cCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEcccccccccccccccC
Confidence 47899999996 3468999999999999999999999999 99999999999998775 5999999998765432
Q ss_pred ----CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 76 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 76 ----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
....++..|+|||.+.+..++.++|+||+|+++++|++|..|+........... .............+...++.+
T Consensus 162 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd06630 162 GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL-IFKIASATTAPSIPEHLSPGL 240 (268)
T ss_pred CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHH-HHHHhccCCCCCCchhhCHHH
Confidence 123568899999999887889999999999999999999988753221100000 000000111223344456789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+||+.+|++||++.+++.
T Consensus 241 ~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 241 RDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHHHHHHcCCCcccCcCHHHHhc
Confidence 99999999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-26 Score=205.77 Aligned_cols=171 Identities=19% Similarity=0.215 Sum_probs=133.6
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccCCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 82 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~gt~ 82 (357)
.|+|.+.+.. ...++++.++..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........++.
T Consensus 108 ~g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 185 (317)
T cd06635 108 LGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTP 185 (317)
T ss_pred CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCc
Confidence 3577777743 3567999999999999999999999999 9999999999999999999999999987766666677889
Q ss_pred CCCchhhhc---CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 83 AFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 83 ~y~aPE~~~---~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
.|++||++. .+..+.++|+||||+++|+|++|..|+............... ......+..++..+.+++.+||
T Consensus 186 ~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l 261 (317)
T cd06635 186 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPTLQSNEWSDYFRNFVDSCL 261 (317)
T ss_pred cccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc----cCCCCCCccccHHHHHHHHHHc
Confidence 999999974 356788999999999999999999887543221111111000 0111112234578999999999
Q ss_pred hcCCCCCCChhhHHHHhccc
Q 018348 160 QYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 160 ~~~p~~Rps~~~i~~~L~~~ 179 (357)
+.+|.+||++.+++..+-.+
T Consensus 262 ~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 262 QKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred cCCcccCcCHHHHHhChhhh
Confidence 99999999999998765444
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=200.89 Aligned_cols=168 Identities=18% Similarity=0.266 Sum_probs=133.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-CeEEecCCCccccCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDGK--- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-~~kl~dfg~~~~~~~~~--- 76 (357)
+++++|.+++....+..+++..+..++.+++.||.|||+.+ ++|+||+|.||+++.++ .++++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 46899999997544557899999999999999999999999 99999999999998875 46999999887654432
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...|+..|+|||++.+..++.++|+||||+++++|++|..|+................. ...++..+..+.+++
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i 234 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF-----APISPNFSRDLRSLI 234 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC-----CCCCCCCCHHHHHHH
Confidence 23578889999999888889999999999999999999988764432222111111111 112234457899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||..+|++|||+.+++.
T Consensus 235 ~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 235 SQLFKVSPRDRPSITSILK 253 (257)
T ss_pred HHHhccChhhCcCHHHHhh
Confidence 9999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=201.68 Aligned_cols=164 Identities=23% Similarity=0.298 Sum_probs=133.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
++|++|.+++.. ..++++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 82 LLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence 468999999953 368999999999999999999999999 999999999999999999999999988765443 23
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh---HHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
..|+..|++||.+.+...+.++|+||||+++|+|++|..|+..... ......... .....+...+..+.++
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 232 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET------ADVLYPATWSTEAIDA 232 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc------ccccCcccCcHHHHHH
Confidence 4578889999999887889999999999999999999988765432 111111110 1223344556889999
Q ss_pred HHHhhhcCCCCCCCh--hhHH
Q 018348 155 ASRCLQYEPRERPNP--KSLV 173 (357)
Q Consensus 155 i~~cl~~~p~~Rps~--~~i~ 173 (357)
+.+||+.||.+||++ .+++
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHHccCChhHcCCccHHHHh
Confidence 999999999999999 5544
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=205.37 Aligned_cols=167 Identities=19% Similarity=0.191 Sum_probs=130.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccCCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 82 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~gt~ 82 (357)
.|+|.+++.. ...++++.++..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........++.
T Consensus 98 ~~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 175 (308)
T cd06634 98 LGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP 175 (308)
T ss_pred CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCc
Confidence 3677777743 3467899999999999999999999999 9999999999999999999999999988766666667889
Q ss_pred CCCchhhhcC---CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 83 AFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 83 ~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
.|+|||.+.+ +..+.++||||||+++|+|++|..|+................ .....+..++..+.++|.+||
T Consensus 176 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~cl 251 (308)
T cd06634 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE----SPALQSGHWSEYFRNFVDSCL 251 (308)
T ss_pred cccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcC----CCCcCcccccHHHHHHHHHHh
Confidence 9999999853 457889999999999999999998865432211111111110 011112235577899999999
Q ss_pred hcCCCCCCChhhHHHH
Q 018348 160 QYEPRERPNPKSLVTA 175 (357)
Q Consensus 160 ~~~p~~Rps~~~i~~~ 175 (357)
+.+|++||++.+++..
T Consensus 252 ~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 252 QKIPQDRPTSEVLLKH 267 (308)
T ss_pred hCCcccCCCHHHHhhC
Confidence 9999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=209.04 Aligned_cols=168 Identities=21% Similarity=0.231 Sum_probs=141.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC----CCCeEEecCCCccccCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~----~~~~kl~dfg~~~~~~~~- 75 (357)
+.||.|.++|... .+++..+..++.|++.++.|||+.+ ++||||||+|+|+.. ++.+|++|||++......
T Consensus 118 ~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~ 193 (382)
T KOG0032|consen 118 CEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE 193 (382)
T ss_pred cCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence 3689999999864 3999999999999999999999999 999999999999953 357999999999987763
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...+||+.|+|||++....++..+|+||+|+++|.|++|..||............... +..+.....+..+....+
T Consensus 194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~--~~~f~~~~w~~is~~akd 271 (382)
T KOG0032|consen 194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRG--DFDFTSEPWDDISESAKD 271 (382)
T ss_pred eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcC--CCCCCCCCccccCHHHHH
Confidence 2457999999999999889999999999999999999999999876644333322221 113344555667889999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
+|+.|+..||.+|+++.++++
T Consensus 272 ~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 272 FIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHHHhcccCcccCCCHHHHhc
Confidence 999999999999999999987
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=205.44 Aligned_cols=170 Identities=19% Similarity=0.283 Sum_probs=128.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-----C
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 77 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-----~ 77 (357)
+++|.+++.. ..+++++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (286)
T cd07832 82 PSDLSEVLRD-EERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSH 159 (286)
T ss_pred CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcccc
Confidence 7899999854 3477999999999999999999999999 9999999999999999999999999887654432 3
Q ss_pred ccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc--------------------cccc
Q 018348 78 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------MLTD 136 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~--------------------~~~~ 136 (357)
..++..|+|||.+.+. ..+.++||||+|+++++|++|.+++.............. .+..
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T cd07832 160 QVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF 239 (286)
T ss_pred ccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccC
Confidence 4578899999998754 468899999999999999999766644321110000000 0000
Q ss_pred ccc----cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 137 SCL----EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 137 ~~~----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+.. .....+..+..+.+++++||+.+|.+||++++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 240 PESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred CCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000 00011234578999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=205.52 Aligned_cols=175 Identities=19% Similarity=0.289 Sum_probs=134.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. ....+++..+..++.|++.||.|||+.+ ++||||+|.||+++.++.++|+|||+++......
T Consensus 87 ~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 163 (288)
T cd05583 87 VNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERA 163 (288)
T ss_pred CCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECcccccccccccccc
Confidence 46899999996 3467999999999999999999999999 9999999999999999999999999877644322
Q ss_pred -CccCCCCCCchhhhcCCC--CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~--~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...|+..|++||.+.+.. .+.++|+||||+++++|++|..|+................... ....+..++..+.+
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~ 241 (288)
T cd05583 164 YSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTMSAEARD 241 (288)
T ss_pred ccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCcccCHHHHH
Confidence 235788999999987654 6889999999999999999998874321100000000011110 11233345578999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
++.+||+.+|++|||+.++...|+...
T Consensus 242 li~~~l~~~p~~R~t~~~~~~~l~~~~ 268 (288)
T cd05583 242 FIQKLLEKDPKKRLGANGADEIKNHPF 268 (288)
T ss_pred HHHHHhcCCHhhccCcchHHHHhcCcc
Confidence 999999999999999999988776653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-26 Score=204.86 Aligned_cols=168 Identities=19% Similarity=0.253 Sum_probs=131.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (293)
T cd06647 98 LAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (293)
T ss_pred CCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence 47899999994 346889999999999999999999999 9999999999999999999999999876554332
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|++||.+....++.++|+||||+++|++++|..||........... ...........+...+..+.++++
T Consensus 174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~ 250 (293)
T cd06647 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IATNGTPELQNPEKLSAIFRDFLN 250 (293)
T ss_pred cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee---hhcCCCCCCCCccccCHHHHHHHH
Confidence 23577889999999888889999999999999999999988865422111000 000000011122334567999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+||..+|++||++.+++..
T Consensus 251 ~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 251 RCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHccCChhhCcCHHHHhcC
Confidence 9999999999999998863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-26 Score=204.09 Aligned_cols=170 Identities=19% Similarity=0.302 Sum_probs=128.2
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-----
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 76 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----- 76 (357)
++++|..++. +...+++..+..++.+|+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (288)
T cd07833 83 ERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLT 159 (288)
T ss_pred CCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCcccccc
Confidence 5566665553 3466999999999999999999999999 9999999999999999999999999987654332
Q ss_pred CccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHh--hhc------------c------cc---
Q 018348 77 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI--RDR------------N------LQ--- 132 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~--~~~------------~------~~--- 132 (357)
...++..|+|||++.+. .++.++|+||||+++|+|++|..|+........ ... . ..
T Consensus 160 ~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07833 160 DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVA 239 (288)
T ss_pred CcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccc
Confidence 34567889999999887 788999999999999999999987754311100 000 0 00
Q ss_pred --ccc-cccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 133 --MLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 133 --~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
... .......++..++..+.++|++||..+|++||++++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 240 FPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000 000011223334678999999999999999999998875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-26 Score=219.87 Aligned_cols=171 Identities=18% Similarity=0.220 Sum_probs=122.1
Q ss_pred CccHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---
Q 018348 3 NETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 76 (357)
Q Consensus 3 ~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~--- 76 (357)
+++|.+++.... ........+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+....
T Consensus 246 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 324 (501)
T PHA03210 246 DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAF 324 (501)
T ss_pred ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEeCCCceecCcccccc
Confidence 356666664321 123345677889999999999999999 9999999999999999999999999997654332
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh----HHhhh-ccc-----cccccc-------
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRD-RNL-----QMLTDS------- 137 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~----~~~~~-~~~-----~~~~~~------- 137 (357)
...||..|+|||++.+..++.++|||||||++|||++|..++..... ..+.. ... ....+.
T Consensus 325 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 404 (501)
T PHA03210 325 DYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDY 404 (501)
T ss_pred cccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHH
Confidence 34689999999999988899999999999999999998755432110 00000 000 000000
Q ss_pred -----------cccCC-CCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 138 -----------CLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 138 -----------~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+... .....+..+.+++.+||+.||.+|||+.+++.
T Consensus 405 i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 405 IDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred hhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000 00112356778899999999999999999986
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-26 Score=208.16 Aligned_cols=173 Identities=23% Similarity=0.287 Sum_probs=127.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++||+.+...... .
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 81 MAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred ccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 46789999997544457999999999999999999999999 999999999999999999999999754322111 0
Q ss_pred -------CccCCCCCCchhhhcCC--CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc---------------
Q 018348 77 -------SYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------- 132 (357)
Q Consensus 77 -------~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~--------------- 132 (357)
...++..|++||++.+. .++.++||||||+++|+|++|..|+..............
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCE 239 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchh
Confidence 11235679999999763 468899999999999999999988754321111000000
Q ss_pred --------------------------ccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 133 --------------------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 133 --------------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...........+..++..+.+++++||+.||++|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000001111122345678999999999999999999999875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-27 Score=230.64 Aligned_cols=168 Identities=18% Similarity=0.234 Sum_probs=131.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||||++.+. .++..++.....+..|++.|+.|||+.| ||||||||.||+++.+|.+|++|||.++......
T Consensus 1316 C~~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1316 CEGGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred hccCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 36899999995 3455666666678999999999999999 9999999999999999999999999988765442
Q ss_pred ----CccCCCCCCchhhhcCCC---CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHH
Q 018348 77 ----SYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 77 ----~~~gt~~y~aPE~~~~~~---~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
...||+.|||||++.+.. ...++||||+|||++||+||++|+....... ..+.. +.....++.|...+.
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~---aIMy~-V~~gh~Pq~P~~ls~ 1468 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW---AIMYH-VAAGHKPQIPERLSS 1468 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh---HHHhH-HhccCCCCCchhhhH
Confidence 356999999999998743 4668999999999999999999975421111 00111 111223455666778
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
+-.+++.+||+.||.+|.++.++++.
T Consensus 1469 ~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1469 EGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 89999999999999999888777653
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-26 Score=200.10 Aligned_cols=168 Identities=20% Similarity=0.302 Sum_probs=134.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++++|.+++.. ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 83 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (260)
T cd06606 83 VSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG 159 (260)
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence 368999999963 348999999999999999999999999 9999999999999999999999999887655432
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|++||.+.+...+.++||||||+++++|++|..|+.......... ............+...+..+.++
T Consensus 160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~ 236 (260)
T cd06606 160 TGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAAL---YKIGSSGEPPEIPEHLSEEAKDF 236 (260)
T ss_pred ccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH---HhccccCCCcCCCcccCHHHHHH
Confidence 3457889999999988888999999999999999999998876543111000 01111111223344556889999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+||+.+|++||++.+++.
T Consensus 237 i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 237 LRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHhCcCChhhCCCHHHHhh
Confidence 99999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-26 Score=203.88 Aligned_cols=167 Identities=20% Similarity=0.263 Sum_probs=130.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++++|.+++. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 99 ~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 99 LEGGALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceeccccccccc
Confidence 47889999884 456899999999999999999999999 999999999999999999999999987654332 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|++||.+.+..++.++|+||||+++|+|++|..|+................ ..... .....+..+.+++.
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~l~~li~ 251 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPKLK--NLHKVSPSLKGFLD 251 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC-CcccC--CcccCCHHHHHHHH
Confidence 3457889999999987788999999999999999999998876432221111110111 00110 11234567899999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.+|.+||++.+++.
T Consensus 252 ~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 252 RLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHhCCcccCcCHHHHhc
Confidence 999999999999999886
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-26 Score=209.75 Aligned_cols=168 Identities=18% Similarity=0.218 Sum_probs=131.6
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC----CCCC
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~----~~~~ 77 (357)
+||..+..+.. -+++|++.++.-|++++++||.|||+++ |||||||..|||+.-+|.++|+|||++-... ...+
T Consensus 112 ~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs 189 (1187)
T KOG0579|consen 112 GGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS 189 (1187)
T ss_pred CCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence 57777777753 4688999999999999999999999999 9999999999999999999999999865432 2357
Q ss_pred ccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 78 YSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
++||+.|||||+... .+|+.++||||||+++.||..+.+|-........--.. ....++. ...|..++..+.
T Consensus 190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKi-aKSePPT--LlqPS~Ws~~F~ 266 (1187)
T KOG0579|consen 190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI-AKSEPPT--LLQPSHWSRSFS 266 (1187)
T ss_pred ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHH-hhcCCCc--ccCcchhhhHHH
Confidence 899999999998754 57899999999999999999998654332221111111 1111111 123556778899
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+++.+||..||..||++.+++.
T Consensus 267 DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 267 DFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HHHHHHHhcCCccCCCHHHHhh
Confidence 9999999999999999988765
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-26 Score=199.47 Aligned_cols=168 Identities=23% Similarity=0.279 Sum_probs=136.0
Q ss_pred CCCccHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-- 76 (357)
+++++|.+++.... +..+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 36889999996532 478999999999999999999999999 9999999999999999999999999887654432
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|++||.+.+...+.++|+||+|+++++|++|..|+................ ....+..++..+.++
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 234 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-----YPPIPSQYSSELRNL 234 (258)
T ss_pred ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-----CCCCCCCCCHHHHHH
Confidence 3457788999999988888999999999999999999998875543322222211111 122333556789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+||..+|++||++.+++.
T Consensus 235 i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 235 VSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHHcCCChhhCcCHHHHhc
Confidence 99999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.3e-26 Score=201.84 Aligned_cols=170 Identities=18% Similarity=0.246 Sum_probs=129.2
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---CccC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~~~g 80 (357)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+....... ...+
T Consensus 90 ~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 168 (287)
T cd07838 90 QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVV 168 (287)
T ss_pred cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccc
Confidence 57888886433446999999999999999999999999 9999999999999999999999999887654332 2346
Q ss_pred CCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccc--------------ccccc------
Q 018348 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--------------DSCLE------ 140 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~~------ 140 (357)
+..|++||.+.+..++.++|+||||+++|+|++|..|+................. .....
T Consensus 169 ~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T cd07838 169 TLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRS 248 (287)
T ss_pred cccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccc
Confidence 7889999999988889999999999999999999877654332211110000000 00000
Q ss_pred -CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 141 -GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 141 -~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....+..+..+.+++.+||+.||++||++.+++.
T Consensus 249 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 249 FKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0011233467889999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.7e-26 Score=198.24 Aligned_cols=168 Identities=18% Similarity=0.223 Sum_probs=135.3
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--C
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~ 76 (357)
+++++|.+++.+. ....+++..+..++.+++.||.|||+.+ ++|+||+|.||+++.++.++++|||++...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 159 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence 4688999998642 2367899999999999999999999999 999999999999999999999999998765443 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|++||.+.+..++.++|+||||+++++|++|..|+................ ....+...+.++.+++.
T Consensus 160 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 234 (256)
T cd08530 160 TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK-----YPPIPPIYSQDLQNFIR 234 (256)
T ss_pred cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCchhhCHHHHHHHH
Confidence 3457889999999988888999999999999999999998876543322222111111 11223345678999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.+|++||++.+++.
T Consensus 235 ~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 235 SMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHcCCCcccCCCHHHHhc
Confidence 999999999999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-26 Score=203.55 Aligned_cols=171 Identities=17% Similarity=0.294 Sum_probs=127.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 82 VDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred CCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 46778887764 3456999999999999999999999999 9999999999999999999999999887643322
Q ss_pred CccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc--------------------cccc
Q 018348 77 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------QMLT 135 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~--------------------~~~~ 135 (357)
...++..|++||.+.+ ..++.++||||||+++|+|++|..|+............. ....
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 2356788999999875 346789999999999999999987775432110000000 0000
Q ss_pred ccccc-----CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 DSCLE-----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 ~~~~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+... ....+.++..+.+++++||+.+|++||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000 0012234578999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-26 Score=198.38 Aligned_cols=166 Identities=23% Similarity=0.315 Sum_probs=133.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (254)
T cd06627 81 AENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA 157 (254)
T ss_pred CCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence 468899999963 478999999999999999999999999 9999999999999999999999999987665443
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|++||...+..++.++|+||+|+++++|++|..|+............... .....+...+..+.+++.
T Consensus 158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~ 232 (254)
T cd06627 158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD-----DHPPLPEGISPELKDFLM 232 (254)
T ss_pred ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc-----CCCCCCCCCCHHHHHHHH
Confidence 245788999999998777889999999999999999999877543221111111101 112234445678999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.+|++||++.+++.
T Consensus 233 ~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 233 QCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHhCChhhCcCHHHHhc
Confidence 999999999999998874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-26 Score=203.02 Aligned_cols=169 Identities=18% Similarity=0.250 Sum_probs=128.1
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCcc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~~ 79 (357)
++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 90 ~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 167 (293)
T cd07843 90 HDLKSLMET-MKQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLV 167 (293)
T ss_pred cCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccCCcccccccc
Confidence 588888853 3347999999999999999999999999 999999999999999999999999988765443 2234
Q ss_pred CCCCCCchhhhcCCC-CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-------------------------ccc
Q 018348 80 TNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------------------------LQM 133 (357)
Q Consensus 80 gt~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-------------------------~~~ 133 (357)
++..|+|||.+.+.. .+.++|+||||+++++|++|..|+............ ...
T Consensus 168 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (293)
T cd07843 168 VTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTK 247 (293)
T ss_pred ccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhccccccc
Confidence 678899999987644 688999999999999999999887543221110000 000
Q ss_pred cccccccCCCCch-hHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 LTDSCLEGQFTDD-DGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 ~~~~~~~~~~~~~-~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.....+...++.. .++.+.++|++||+.+|++|||+.+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 248 YPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0011111122222 4577899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-26 Score=203.24 Aligned_cols=170 Identities=19% Similarity=0.191 Sum_probs=127.5
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----Cc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----~~ 78 (357)
+|+|.+++.. ....+++..+..++.||++||.|||+.+ ++|+||+|+||+++.++.++|+|||+++...... ..
T Consensus 85 ~~~L~~~i~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (298)
T cd07841 85 ETDLEKVIKD-KSIVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQ 162 (298)
T ss_pred CCCHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccccc
Confidence 7899999963 2247999999999999999999999999 9999999999999999999999999987654332 23
Q ss_pred cCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-----------------cccccccc
Q 018348 79 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------------MLTDSCLE 140 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 140 (357)
.++..|+|||.+.+ ..++.++|+||||+++++|++|..++.............. ........
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T cd07841 163 VVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPF 242 (298)
T ss_pred ccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccccccc
Confidence 45778999999865 3578899999999999999999765543221110000000 00000000
Q ss_pred -----CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 141 -----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 141 -----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.......+..+.++|.+||+.+|++|||+.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 243 PPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred CCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0111234578899999999999999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-26 Score=205.37 Aligned_cols=169 Identities=18% Similarity=0.294 Sum_probs=127.5
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCcc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~~ 79 (357)
++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....
T Consensus 88 ~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 165 (301)
T cd07873 88 KDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEV 165 (301)
T ss_pred cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccc
Confidence 688888853 3457899999999999999999999999 999999999999999999999999988754322 1234
Q ss_pred CCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-----------ccccc---------ccc
Q 018348 80 TNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQMLT---------DSC 138 (357)
Q Consensus 80 gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-----------~~~~~---------~~~ 138 (357)
++..|+|||.+.+. .++.++||||||+++|+|++|..||............ ..... .+.
T Consensus 166 ~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (301)
T cd07873 166 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPK 245 (301)
T ss_pred eeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCc
Confidence 67899999998753 4788999999999999999999887654321110000 00000 000
Q ss_pred cc----CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 139 LE----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 139 ~~----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.. ......++..+.++|.+||+.||.+|||+.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 246 YRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00 0011234567899999999999999999999886
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=203.62 Aligned_cols=166 Identities=20% Similarity=0.219 Sum_probs=129.5
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccCCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 82 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~gt~ 82 (357)
.|+|.+++.. ...++++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........|+.
T Consensus 104 ~~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~ 181 (313)
T cd06633 104 LGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTP 181 (313)
T ss_pred CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccc
Confidence 3577777743 4567999999999999999999999999 9999999999999999999999999987665555667889
Q ss_pred CCCchhhhc---CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 83 AFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 83 ~y~aPE~~~---~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
.|+|||++. .+.++.++||||||+++|+|++|..|+................ .........+..+.+++.+||
T Consensus 182 ~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l 257 (313)
T cd06633 182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND----SPTLQSNEWTDSFRGFVDYCL 257 (313)
T ss_pred cccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC----CCCCCccccCHHHHHHHHHHc
Confidence 999999984 3567889999999999999999998875432211111111110 011112233467899999999
Q ss_pred hcCCCCCCChhhHHH
Q 018348 160 QYEPRERPNPKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rps~~~i~~ 174 (357)
+.+|.+||++.+++.
T Consensus 258 ~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 258 QKIPQERPASAELLR 272 (313)
T ss_pred cCChhhCcCHHHHhc
Confidence 999999999999885
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-26 Score=202.54 Aligned_cols=166 Identities=19% Similarity=0.314 Sum_probs=126.9
Q ss_pred CccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---
Q 018348 3 NETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 76 (357)
Q Consensus 3 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~--- 76 (357)
.|+|.+++... ....+++..++.++.|++.||.|||++ + ++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 161 (283)
T cd06617 83 DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKT 161 (283)
T ss_pred cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 46788777542 245799999999999999999999997 7 9999999999999999999999999987654332
Q ss_pred CccCCCCCCchhhhcC----CCCCCcccchhHHHHHHHHHcCCCCCCcchh--HHhhhccccccccccccCCCCchhHHH
Q 018348 77 SYSTNLAFTPPEYLRT----GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...++..|++||.+.+ ..++.++|+||||+++|+|++|+.|+..... ..... .............++..
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 236 (283)
T cd06617 162 IDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQ-----VVEEPSPQLPAEKFSPE 236 (283)
T ss_pred cccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHH-----HHhcCCCCCCccccCHH
Confidence 2457889999998865 3458899999999999999999988753211 11110 00000000111234578
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHH
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+++.+||..+|++||++.+++.
T Consensus 237 l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 237 FQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 999999999999999999999876
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=203.70 Aligned_cols=170 Identities=19% Similarity=0.282 Sum_probs=128.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----Cc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----~~ 78 (357)
+++|.+++....+..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (284)
T cd07860 82 HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 160 (284)
T ss_pred ccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccc
Confidence 357888886555678999999999999999999999999 9999999999999999999999999887554321 23
Q ss_pred cCCCCCCchhhhcCCC-CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc------------------------
Q 018348 79 STNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------------ 133 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~------------------------ 133 (357)
.++..|+|||++.+.. ++.++||||||+++|+|+||+.|+...............
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd07860 161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPK 240 (284)
T ss_pred cccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccc
Confidence 4578899999887644 588999999999999999999887653221100000000
Q ss_pred cccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...... .......++.+.++|.+||+.||++||++.+++.
T Consensus 241 ~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 241 WARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred ccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000 0011224467889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=200.03 Aligned_cols=166 Identities=18% Similarity=0.286 Sum_probs=132.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. .+.+++..+..++.+++.++.|||+.+ ++|+||+|+||+++.++.++++|||++.......
T Consensus 84 ~~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06641 84 LGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhc
Confidence 46889999984 457999999999999999999999999 9999999999999999999999999876544321
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...++..|++||.+.+...+.++|+||||+++|+|++|..|+............. .......+..++..+.+++.
T Consensus 160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~ 234 (277)
T cd06641 160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP-----KNNPPTLEGNYSKPLKEFVE 234 (277)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh-----cCCCCCCCcccCHHHHHHHH
Confidence 2457888999999988788999999999999999999998875432221111110 01111233345578999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+||+.+|++||++.+++..
T Consensus 235 ~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 235 ACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHccCChhhCcCHHHHHhC
Confidence 9999999999999999873
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-26 Score=207.10 Aligned_cols=169 Identities=17% Similarity=0.302 Sum_probs=129.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
+++|.+++. ..+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++..... ...
T Consensus 92 ~~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 168 (337)
T cd07858 92 DTDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEY 168 (337)
T ss_pred CCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCCccccccc
Confidence 467888885 3567999999999999999999999999 999999999999999999999999998765433 234
Q ss_pred cCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh-------------------hccccc----c
Q 018348 79 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-------------------DRNLQM----L 134 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~-------------------~~~~~~----~ 134 (357)
.++..|+|||.+.. ..++.++||||||+++|+|++|..||......... ...... .
T Consensus 169 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T cd07858 169 VVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSL 248 (337)
T ss_pred ccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhc
Confidence 57889999998865 45889999999999999999999887543211000 000000 0
Q ss_pred ---ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 135 ---TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 135 ---~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
..... ....+.+++.+.+++++||+.+|++|||+.+++..
T Consensus 249 ~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 249 PYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred CcccccCH-HHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000 01123456788999999999999999999999875
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-26 Score=206.50 Aligned_cols=169 Identities=18% Similarity=0.298 Sum_probs=129.9
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-------
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------- 76 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------- 76 (357)
++|.+++. ...++++..+..++.+++.||.|||+.+ ++||||||.||+++.++.++|+|||.+.......
T Consensus 88 ~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~ 164 (330)
T cd07834 88 TDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLT 164 (330)
T ss_pred hhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeeccccccccccc
Confidence 47888885 3458999999999999999999999999 9999999999999999999999999987655432
Q ss_pred CccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc-------------------ccc
Q 018348 77 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-------------------LTD 136 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~-------------------~~~ 136 (357)
...++..|+|||.+.+. .++.++|+||||+++++|++|..||............... ...
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (330)
T cd07834 165 EYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLK 244 (330)
T ss_pred ccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHh
Confidence 23568889999999877 7899999999999999999999887654321111100000 000
Q ss_pred ------ccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 137 ------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 137 ------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
........+..+..+.+++.+||+.+|++||++.+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 245 SLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000001112345788999999999999999999998863
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.4e-26 Score=229.12 Aligned_cols=163 Identities=15% Similarity=0.156 Sum_probs=120.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-------------------CCCeEE
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-------------------DGNPRL 63 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-------------------~~~~kl 63 (357)
+++|.++|.. ...++++.++..|+.||+.||.|||+++ |+||||||+||||+. ++.+|+
T Consensus 63 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki 140 (793)
T PLN00181 63 DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG-IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKS 140 (793)
T ss_pred CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC-eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccc
Confidence 6799999953 3467999999999999999999999999 999999999999954 455667
Q ss_pred ecCCCccccCCC--------------------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh
Q 018348 64 STFGLMKNSRDG--------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 123 (357)
Q Consensus 64 ~dfg~~~~~~~~--------------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~ 123 (357)
+|||+++..... ....||+.|||||++.+..++.++|||||||++|||++|..|+.....
T Consensus 141 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~ 220 (793)
T PLN00181 141 REIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR 220 (793)
T ss_pred cccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH
Confidence 777776532110 012468889999999988899999999999999999998765432211
Q ss_pred HHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 124 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..... ......+ ... ........++.+||+.+|.+||++.+|+.
T Consensus 221 -~~~~~-~~~~~~~----~~~-~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 221 -TMSSL-RHRVLPP----QIL-LNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred -HHHHH-HHhhcCh----hhh-hcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 11000 0111111 111 11234668889999999999999999976
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=197.49 Aligned_cols=166 Identities=17% Similarity=0.207 Sum_probs=131.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++++|.+++. ..+++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++.....
T Consensus 88 ~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (264)
T cd06653 88 MPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGT 164 (264)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECccccccccccccccCc
Confidence 46899999995 3456899999999999999999999999 999999999999999999999999998754321
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....++..|+|||++.+...+.++|+||||+++++|++|+.|+.......... ...........+......+.+
T Consensus 165 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~p~~~~~~~~~ 240 (264)
T cd06653 165 GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIF----KIATQPTKPMLPDGVSDACRD 240 (264)
T ss_pred cccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHH----HHHcCCCCCCCCcccCHHHHH
Confidence 12457889999999988788999999999999999999998875432211111 111111123345556688999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++.+||+ +|..||+..+++.
T Consensus 241 ~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 241 FLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHHhc-CcccCccHHHHhc
Confidence 9999999 5799999997764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-26 Score=200.92 Aligned_cols=169 Identities=18% Similarity=0.254 Sum_probs=126.6
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+.+.. ....+++..+..++.|++.||.|||+.+ ++||||+|.||+++. +.++|+|||+++..... ....
T Consensus 83 ~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~ 159 (282)
T cd07831 83 DMNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYI 159 (282)
T ss_pred CccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCCC
Confidence 3678888853 3457999999999999999999999999 999999999999999 99999999998765432 2345
Q ss_pred CCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc----------------ccccccccccC-
Q 018348 80 TNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN----------------LQMLTDSCLEG- 141 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~- 141 (357)
++..|+|||++.. ...+.++|||||||++|+|++|..|+............ ...........
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (282)
T cd07831 160 STRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSK 239 (282)
T ss_pred CCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCccc
Confidence 7889999998754 45788999999999999999999887643211100000 00000000000
Q ss_pred ------CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 142 ------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 142 ------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
......+..+.++|.+||+.+|++||++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 240 KGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 001234678999999999999999999999875
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=9e-26 Score=206.16 Aligned_cols=168 Identities=17% Similarity=0.267 Sum_probs=127.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------- 75 (357)
+++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||+++.....
T Consensus 89 ~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 165 (332)
T cd07857 89 EADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGF 165 (332)
T ss_pred cCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceeccccccccccc
Confidence 468888885 4568999999999999999999999999 999999999999999999999999998754422
Q ss_pred -CCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-----------------------
Q 018348 76 -KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN----------------------- 130 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~----------------------- 130 (357)
....|+..|+|||.+.+ ..++.++|+||||+++|+|++|..|+............
T Consensus 166 ~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
T cd07857 166 MTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNY 245 (332)
T ss_pred ccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHH
Confidence 12357889999998865 45789999999999999999999877542211000000
Q ss_pred ---ccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 131 ---LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 131 ---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
........+ ....+..+..+.+++.+||+.||.+|||+.+++.
T Consensus 246 ~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 246 IRSLPNIPKKPF-ESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHhccccCCcch-HhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 0111223567999999999999999999999874
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=201.96 Aligned_cols=170 Identities=19% Similarity=0.249 Sum_probs=126.3
Q ss_pred ccHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-CCCeEEecCCCccccCCC----
Q 018348 4 ETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 4 gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-~~~~kl~dfg~~~~~~~~---- 75 (357)
++|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||+|+||+++. ++.++|+|||+++.....
T Consensus 90 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~ 168 (295)
T cd07837 90 SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSY 168 (295)
T ss_pred cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeecccceecCCCcccc
Confidence 47888875432 346899999999999999999999999 999999999999998 889999999988754322
Q ss_pred CCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccc--------------c----
Q 018348 76 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--------------D---- 136 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~--------------~---- 136 (357)
....++..|+|||.+.+ ..++.++|+||||+++|+|++|..|+...............+. .
T Consensus 169 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (295)
T cd07837 169 THEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEF 248 (295)
T ss_pred CCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhc
Confidence 12345788999998865 3468899999999999999999988765322111100000000 0
Q ss_pred cc----ccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 137 SC----LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 137 ~~----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+. ......+..+..+.++|.+||+.||.+||++.+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 249 PQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 000011235577999999999999999999998875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=206.18 Aligned_cols=168 Identities=18% Similarity=0.310 Sum_probs=124.8
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-------
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------- 76 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------- 76 (357)
++|.+++ ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 92 ~~l~~~~---~~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 167 (336)
T cd07849 92 TDLYKLI---KTQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLT 167 (336)
T ss_pred cCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcC
Confidence 4666666 3467999999999999999999999999 9999999999999999999999999887643321
Q ss_pred CccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhh-----------cccccccc--------
Q 018348 77 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-----------RNLQMLTD-------- 136 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~-----------~~~~~~~~-------- 136 (357)
...|+..|+|||.+.+ ..++.++||||||+++|+|++|+.|+.......... .....+..
T Consensus 168 ~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (336)
T cd07849 168 EYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIK 247 (336)
T ss_pred CcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHh
Confidence 2357889999998765 457889999999999999999998875431110000 00000000
Q ss_pred c-cccCC-----CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 137 S-CLEGQ-----FTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 137 ~-~~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
. ..... ..+..+..+.+++.+||+.+|++|||+.+++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 248 SLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00000 011234678999999999999999999999875
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=206.33 Aligned_cols=167 Identities=15% Similarity=0.226 Sum_probs=126.4
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---Ccc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~~~ 79 (357)
+|+|.+.+.. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++...... ...
T Consensus 104 ~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 178 (353)
T cd07850 104 DANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 178 (353)
T ss_pred CCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCc
Confidence 3567777632 2899999999999999999999999 9999999999999999999999999987654332 335
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-----------------------------
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN----------------------------- 130 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~----------------------------- 130 (357)
++..|+|||.+.+..++.++||||||+++|+|++|+.||............
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
T cd07850 179 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKY 258 (353)
T ss_pred ccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCC
Confidence 788999999999888999999999999999999999887643210000000
Q ss_pred ----ccccccccc----cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 131 ----LQMLTDSCL----EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 131 ----~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
......... ....+...+..+.+++.+||+.||++|||+.+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 259 AGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred CCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000000000 00001234567899999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=200.91 Aligned_cols=171 Identities=19% Similarity=0.264 Sum_probs=127.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ...
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 159 (283)
T cd07835 81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHE 159 (283)
T ss_pred CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcc
Confidence 468899886433357999999999999999999999999 999999999999999999999999998754322 123
Q ss_pred cCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc--------------cc-------ccc
Q 018348 79 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------QM-------LTD 136 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~--------------~~-------~~~ 136 (357)
.++..|+|||++.+. .++.++|+||||+++|+|++|..||............. .. ...
T Consensus 160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07835 160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK 239 (283)
T ss_pred ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence 457889999988764 46889999999999999999998875432211000000 00 000
Q ss_pred --ccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 137 --SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 137 --~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...........+..+.+++.+||+.+|.+||++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 240 WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00001112334567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=220.12 Aligned_cols=163 Identities=21% Similarity=0.348 Sum_probs=120.1
Q ss_pred CccHHhhhccCCCCCC-CHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC--------
Q 018348 3 NETLAKHLFHWETHPM-KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-------- 73 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l-~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~-------- 73 (357)
.-+|.+++.+ ++.. .....++++++|++||.|+|+++ +|||||||.|||++.++.|||+|||+++...
T Consensus 680 ~~ll~~iI~~--N~~~~~~d~~wrLFreIlEGLaYIH~~g-iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~ 756 (1351)
T KOG1035|consen 680 KTLLRDIIRR--NHFNSQRDEAWRLFREILEGLAYIHDQG-IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQ 756 (1351)
T ss_pred hhHHHHHHHh--cccchhhHHHHHHHHHHHHHHHHHHhCc-eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhh
Confidence 3456666642 2332 45678999999999999999999 9999999999999999999999999987611
Q ss_pred --------------CCCCccCCCCCCchhhhcCC---CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccccc
Q 018348 74 --------------DGKSYSTNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136 (357)
Q Consensus 74 --------------~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (357)
+.++.+||.-|+|||++.+. +++.|.|+||||+|++||+.- |..... +...+..+.+
T Consensus 757 ~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~TsME---Ra~iL~~LR~ 830 (1351)
T KOG1035|consen 757 DLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTSME---RASILTNLRK 830 (1351)
T ss_pred ccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCchHH---HHHHHHhccc
Confidence 11245789999999999874 489999999999999999863 433211 1111122222
Q ss_pred cccc--CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 137 SCLE--GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 137 ~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..++ ..+..+..+.-..+|++|++.||++|||+.+++.
T Consensus 831 g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 831 GSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred CCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 2222 2223333445578999999999999999999875
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-25 Score=194.24 Aligned_cols=161 Identities=27% Similarity=0.334 Sum_probs=130.2
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CC
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~ 77 (357)
++++|.+++. ..+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 76 ~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 152 (250)
T cd05123 76 PGGELFSHLS--KEGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT 152 (250)
T ss_pred CCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccC
Confidence 5899999996 3457999999999999999999999999 999999999999999999999999988765432 23
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
..++..|++||.+.+...+.++|+||||+++|++++|..|+.............. .....+...+..+.+++++
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~ 226 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK------DPLRFPEFLSPEARDLISG 226 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc------CCCCCCCCCCHHHHHHHHH
Confidence 4578899999999887789999999999999999999988754432221111111 1122333445789999999
Q ss_pred hhhcCCCCCCChhh
Q 018348 158 CLQYEPRERPNPKS 171 (357)
Q Consensus 158 cl~~~p~~Rps~~~ 171 (357)
||..||++||++.+
T Consensus 227 ~l~~~p~~R~~~~~ 240 (250)
T cd05123 227 LLQKDPTKRLGSGG 240 (250)
T ss_pred HhcCCHhhCCCccc
Confidence 99999999999954
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=199.20 Aligned_cols=171 Identities=16% Similarity=0.277 Sum_probs=129.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++....+..+++..++.++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYV 159 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCC
Confidence 789999986544468899999999999999999999999 999999999999999999999999998765433 2345
Q ss_pred CCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhc---------------------cccccccc
Q 018348 80 TNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR---------------------NLQMLTDS 137 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~---------------------~~~~~~~~ 137 (357)
++..|+|||.+.+ ..++.++|+||||+++++|++|..|++.......... ........
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07830 160 STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQ 239 (283)
T ss_pred CcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccc
Confidence 7889999998864 4578999999999999999999987754321110000 00000000
Q ss_pred cc---cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 138 CL---EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 138 ~~---~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.. ........+..+.+++++||+.+|++||++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 240 FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00 00111112467999999999999999999999875
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=198.76 Aligned_cols=165 Identities=23% Similarity=0.306 Sum_probs=131.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++++|.+++. +.+.+++..+..|+.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++.......
T Consensus 84 ~~~~~L~~~l~--~~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~ 160 (280)
T cd05581 84 APNGELLQYIR--KYGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES 160 (280)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence 36899999996 3458999999999999999999999999 9999999999999999999999999877544321
Q ss_pred --------------------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccccc
Q 018348 77 --------------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136 (357)
Q Consensus 77 --------------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (357)
...++..|++||.+....++.++|+||||++++++++|..|+.............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----- 235 (280)
T cd05581 161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL----- 235 (280)
T ss_pred CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-----
Confidence 1245788999999988888999999999999999999998876543221111111
Q ss_pred ccccCCCCchhHHHHHHHHHHhhhcCCCCCCCh----hhHHH
Q 018348 137 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNP----KSLVT 174 (357)
Q Consensus 137 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~----~~i~~ 174 (357)
......+...++.+.+++++||+.+|++||++ .+++.
T Consensus 236 -~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 236 -KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred -hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11122344456789999999999999999999 66653
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=201.30 Aligned_cols=162 Identities=21% Similarity=0.305 Sum_probs=125.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.++|. ...++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 87 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (290)
T cd05613 87 INGGELFTHLS--QRERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERA 163 (290)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceeccccccccc
Confidence 57899999996 3467899999999999999999999999 9999999999999999999999999987654321
Q ss_pred -CccCCCCCCchhhhcCC--CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...|+..|++||.+... ..+.++||||||+++|+|++|..|+...............+.. ....++..++..+.+
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 241 (290)
T cd05613 164 YSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQEMSALAKD 241 (290)
T ss_pred ccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc--cCCCCCccCCHHHHH
Confidence 34578899999998753 4678999999999999999999887532110000000011110 012234456678999
Q ss_pred HHHHhhhcCCCCCC
Q 018348 154 LASRCLQYEPRERP 167 (357)
Q Consensus 154 li~~cl~~~p~~Rp 167 (357)
++++||+.+|++||
T Consensus 242 ll~~~l~~~p~~R~ 255 (290)
T cd05613 242 IIQRLLMKDPKKRL 255 (290)
T ss_pred HHHHHhcCCHHHhc
Confidence 99999999999997
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=200.32 Aligned_cols=168 Identities=21% Similarity=0.337 Sum_probs=124.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---Cc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~~ 78 (357)
+++|.+.+.. ....+++..+..++.+++.||.|||+. + ++||||+|+||+++.++.++|+|||++....... ..
T Consensus 97 ~~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06618 97 STCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRS 174 (296)
T ss_pred CcCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCC
Confidence 3455655543 245899999999999999999999974 7 9999999999999999999999999987654322 23
Q ss_pred cCCCCCCchhhhcCCC----CCCcccchhHHHHHHHHHcCCCCCCcchhHH-hhhccccccccccccCCCCchhHHHHHH
Q 018348 79 STNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~----~~~~~Di~slG~vl~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
.++..|+|||.+.+.. ++.++||||||+++|+|++|+.|+....... ......... .+ .......++..+.+
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~l~~ 251 (296)
T cd06618 175 AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE-PP--SLPPNEGFSPDFCS 251 (296)
T ss_pred CCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC-CC--CCCCCCCCCHHHHH
Confidence 4678899999987543 7889999999999999999998875421111 000000000 00 00111134578999
Q ss_pred HHHHhhhcCCCCCCChhhHHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~ 175 (357)
++.+||+.||++||++.+++..
T Consensus 252 li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 252 FVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHHHccCChhhCCCHHHHhcC
Confidence 9999999999999999998864
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=199.95 Aligned_cols=170 Identities=21% Similarity=0.311 Sum_probs=129.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----Cc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----~~ 78 (357)
.++|.+++.. ....+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+....... ..
T Consensus 81 ~~~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~ 158 (283)
T cd05118 81 DTDLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY 158 (283)
T ss_pred CCCHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence 3578887754 3468999999999999999999999999 9999999999999999999999999887655432 24
Q ss_pred cCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-----------cccccc----------
Q 018348 79 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQMLTD---------- 136 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-----------~~~~~~---------- 136 (357)
.++..|++||.+.+. ..+.++|+||||+++++|++|+.|++........... ......
T Consensus 159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05118 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP 238 (283)
T ss_pred cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence 567889999998876 6889999999999999999999887543221110000 000000
Q ss_pred ---ccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 137 ---SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 137 ---~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
........+..+..+.++|.+||+.||.+||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000112234578999999999999999999999875
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-27 Score=193.90 Aligned_cols=169 Identities=17% Similarity=0.220 Sum_probs=125.9
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---CccCCCC
Q 018348 7 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLA 83 (357)
Q Consensus 7 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~~~gt~~ 83 (357)
..++...+...+++...-.|..-.++||.||...-+||||||||+|||++..|.+||||||++-....+- .-.|...
T Consensus 153 Yk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrp 232 (361)
T KOG1006|consen 153 YKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRP 232 (361)
T ss_pred HHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCcc
Confidence 3344444566788888888888899999999987669999999999999999999999999987654432 2357889
Q ss_pred CCchhhhcCC--CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCC-CCchhHHHHHHHHHHhhh
Q 018348 84 FTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQ 160 (357)
Q Consensus 84 y~aPE~~~~~--~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~ 160 (357)
|||||.+... .++.+|||||||++++|+.||..|+..+......-..+..--.+.+... -....+..+..+|..|+.
T Consensus 233 YmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~ 312 (361)
T KOG1006|consen 233 YMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLI 312 (361)
T ss_pred ccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhh
Confidence 9999999752 4889999999999999999999888765432211111111011111111 112245789999999999
Q ss_pred cCCCCCCChhhHHHH
Q 018348 161 YEPRERPNPKSLVTA 175 (357)
Q Consensus 161 ~~p~~Rps~~~i~~~ 175 (357)
.|.+.||.+.++..+
T Consensus 313 Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 313 KDRSDRPKYDDLKKF 327 (361)
T ss_pred cccccCcchhhhhcC
Confidence 999999999988753
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=194.28 Aligned_cols=167 Identities=16% Similarity=0.229 Sum_probs=132.2
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--- 75 (357)
+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++. +.++|+|||++......
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~ 161 (260)
T cd08222 84 CEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDL 161 (260)
T ss_pred CCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCCccc
Confidence 4788999988642 3467999999999999999999999999 999999999999975 56999999988765332
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....++..|++||.+.+..++.++|+||||+++|+|++|..|+............... .....+..++..+.++
T Consensus 162 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 236 (260)
T cd08222 162 ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG-----PTPSLPETYSRQLNSI 236 (260)
T ss_pred ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC-----CCCCCcchhcHHHHHH
Confidence 2345788999999998777889999999999999999999887644332221111111 1112344556789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
|.+||+.+|++||++.+++.
T Consensus 237 i~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 237 MQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHhcCChhhCcCHHHHhh
Confidence 99999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=230.31 Aligned_cols=175 Identities=24% Similarity=0.420 Sum_probs=134.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT---SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~ 77 (357)
|+||+|.+++. .++|..+.+|+.|++.||+||| +.+ ++||||||+||+++.++.+++. ||..........
T Consensus 765 ~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~ 837 (968)
T PLN00113 765 IEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTK 837 (968)
T ss_pred CCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCC
Confidence 58999999994 4899999999999999999999 456 9999999999999988887775 665544433444
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh-----HHh-----hhccccccccccccCC--CCc
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-----DLI-----RDRNLQMLTDSCLEGQ--FTD 145 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~--~~~ 145 (357)
..+|..|+|||++.+..++.++|||||||++|||++|+.|+..... ..+ .........++..... .+.
T Consensus 838 ~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (968)
T PLN00113 838 CFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQ 917 (968)
T ss_pred ccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccH
Confidence 5678999999999988899999999999999999999988743211 000 0111112223322221 223
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
....++.+++.+||+.+|++||++.+|++.|+.+...
T Consensus 918 ~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 918 NEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 4455788999999999999999999999999988654
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-25 Score=197.83 Aligned_cols=179 Identities=16% Similarity=0.220 Sum_probs=134.1
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------CceecCCCCCCeeeCCCCCeEEecCCCccccC
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG--------RALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 73 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--------~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~ 73 (357)
|+|||.+|| +...++|....+|+..+++||+|||+.- +|+|||||+.||||..|+++.|+|||++..+.
T Consensus 291 ~kGsL~dyL---~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~ 367 (534)
T KOG3653|consen 291 PKGSLCDYL---KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE 367 (534)
T ss_pred cCCcHHHHH---HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence 689999999 5789999999999999999999999742 49999999999999999999999999998776
Q ss_pred CCC------CccCCCCCCchhhhcCCC-CC-----CcccchhHHHHHHHHHcCCCCCC-------c----------chhH
Q 018348 74 DGK------SYSTNLAFTPPEYLRTGR-VT-----PESVIYSFGTLLLDLLSGKHIPP-------S----------HALD 124 (357)
Q Consensus 74 ~~~------~~~gt~~y~aPE~~~~~~-~~-----~~~Di~slG~vl~el~~g~~~~~-------~----------~~~~ 124 (357)
++. ..+||..|||||++.+.. .. .+.||||+|.|+|||+++-.-.. . .+.+
T Consensus 368 p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e 447 (534)
T KOG3653|consen 368 PGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLE 447 (534)
T ss_pred CCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHH
Confidence 543 357999999999998632 22 36999999999999998643211 0 0112
Q ss_pred HhhhccccccccccccCC-CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 125 LIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
.+....+.+...|.++.. .......-+.+.+..||..||+.|.|+.-+.+.+..+....
T Consensus 448 ~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 448 EMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred HHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 222222222222222211 11233567899999999999999999988888776665443
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-26 Score=194.00 Aligned_cols=167 Identities=17% Similarity=0.242 Sum_probs=135.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
-||..|.++ .++++|++.++..|+.+-+.||+|||... -+|||||..|||++.+|.+||+|||++-...+. .+.
T Consensus 112 AGSiSDI~R-~R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTV 189 (502)
T KOG0574|consen 112 AGSISDIMR-ARRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTV 189 (502)
T ss_pred CCcHHHHHH-HhcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcc
Confidence 378888885 36789999999999999999999999988 899999999999999999999999998776543 356
Q ss_pred cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 79 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
.||+.|||||++..-.|..++||||||++..||..|++|+..--. +.. .+.....+...-.-|...+.++.+++++|
T Consensus 190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP--MRA-IFMIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP--MRA-IFMIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc--cce-eEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 799999999999988899999999999999999999977653211 111 11111122222233556778999999999
Q ss_pred hhcCCCCCCChhhHHH
Q 018348 159 LQYEPRERPNPKSLVT 174 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~ 174 (357)
|..+|++|-++..+++
T Consensus 267 LiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 267 LIKKPEERKTALRLCE 282 (502)
T ss_pred hcCCHHHHHHHHHHhh
Confidence 9999999998877665
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-25 Score=204.45 Aligned_cols=169 Identities=18% Similarity=0.315 Sum_probs=127.5
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------- 75 (357)
+|+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 167 (334)
T cd07855 91 ESDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYF 167 (334)
T ss_pred hhhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcc
Confidence 467888885 3456999999999999999999999999 999999999999999999999999988654322
Q ss_pred -CCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhh-------------------cccccc
Q 018348 76 -KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------RNLQML 134 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~-------------------~~~~~~ 134 (357)
....++..|++||.+.+ ..++.++||||||+++|+|++|..||........-. ......
T Consensus 168 ~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 247 (334)
T cd07855 168 MTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKY 247 (334)
T ss_pred cccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHH
Confidence 12357889999999865 457889999999999999999998885532110000 000000
Q ss_pred ccc-cccCC-----CCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 135 TDS-CLEGQ-----FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 135 ~~~-~~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
... ..... ..+..+..+.+++++||+.+|++||++.+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 248 IQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000 00000 11234578999999999999999999999876
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-25 Score=202.81 Aligned_cols=168 Identities=20% Similarity=0.302 Sum_probs=126.0
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-------
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------- 76 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------- 76 (357)
++|.+++. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 93 ~~L~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 168 (337)
T cd07852 93 TDLHAVIR---ANILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPV 168 (337)
T ss_pred cCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcc
Confidence 57888874 238899999999999999999999999 9999999999999999999999999887543321
Q ss_pred --CccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-----------------------
Q 018348 77 --SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN----------------------- 130 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~----------------------- 130 (357)
...|+..|++||.+.+ ...+.++|+||||+++|+|++|+.|+............
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T cd07852 169 LTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATM 248 (337)
T ss_pred hhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHh
Confidence 2357889999998765 45788999999999999999999887543211110000
Q ss_pred cccccccc--ccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 131 LQMLTDSC--LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 131 ~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
........ ......+.++..+.++|.+||+.+|++|||+.+++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 249 LDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000 0001112245789999999999999999999999863
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-25 Score=198.82 Aligned_cols=169 Identities=20% Similarity=0.303 Sum_probs=124.0
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCcc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~~ 79 (357)
++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..... ....
T Consensus 87 ~~L~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (291)
T cd07844 87 TDLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEV 164 (291)
T ss_pred CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCccccccc
Confidence 589888853 3457899999999999999999999999 999999999999999999999999987653321 1234
Q ss_pred CCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchh--HHhhh----------ccccc-------------
Q 018348 80 TNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIRD----------RNLQM------------- 133 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~--~~~~~----------~~~~~------------- 133 (357)
++..|+|||.+.+ ..++.++||||+|+++|+|++|..|+..... ..... .....
T Consensus 165 ~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (291)
T cd07844 165 VTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFP 244 (291)
T ss_pred cccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccccc
Confidence 5788999999875 4578899999999999999999988754321 00000 00000
Q ss_pred -cccccccCCCC-chhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 -LTDSCLEGQFT-DDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 -~~~~~~~~~~~-~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..........+ ......+.+++.+||+.+|.+|||+.+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 245 FYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000000000 111267789999999999999999998875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-25 Score=202.96 Aligned_cols=170 Identities=16% Similarity=0.216 Sum_probs=127.7
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-CccC
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYST 80 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-~~~g 80 (357)
.+++|.+++. .+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++...... ...+
T Consensus 104 ~~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~ 179 (345)
T cd07877 104 MGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 179 (345)
T ss_pred cccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCCCCEEEeccccccccccccccccc
Confidence 3678888774 356999999999999999999999999 9999999999999999999999999987654432 3467
Q ss_pred CCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-----------ccccc-----------cc
Q 018348 81 NLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQMLT-----------DS 137 (357)
Q Consensus 81 t~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-----------~~~~~-----------~~ 137 (357)
+..|+|||.+.+ ..++.++||||||+++|+|++|+.|+............ ...+. ..
T Consensus 180 ~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (345)
T cd07877 180 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 259 (345)
T ss_pred CCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcc
Confidence 889999999876 46788999999999999999999887542211100000 00000 00
Q ss_pred cc---cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 138 CL---EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 138 ~~---~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
.. ........++.+.++|.+||+.||.+||++.+++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 260 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred cCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 00 000011234678999999999999999999988864
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-25 Score=214.78 Aligned_cols=173 Identities=19% Similarity=0.254 Sum_probs=115.9
Q ss_pred CCCccHHhhhccCCC------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-CCCe
Q 018348 1 MPNETLAKHLFHWET------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNP 61 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~------------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-~~~~ 61 (357)
+++|+|.+++..... .......+..|+.|++.||.|||+.+ |+||||||+|||++. ++.+
T Consensus 217 ~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLKP~NILl~~~~~~~ 295 (566)
T PLN03225 217 EGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVKPQNIIFSEGSGSF 295 (566)
T ss_pred cCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCCHHHEEEeCCCCcE
Confidence 367889888853210 01123346679999999999999999 999999999999985 5899
Q ss_pred EEecCCCccccCCC-----CCccCCCCCCchhhhcCCC----------------------CCCcccchhHHHHHHHHHcC
Q 018348 62 RLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGR----------------------VTPESVIYSFGTLLLDLLSG 114 (357)
Q Consensus 62 kl~dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~----------------------~~~~~Di~slG~vl~el~~g 114 (357)
||+|||+++..... ....+|+.|+|||.+.... ++.++|||||||++|||+++
T Consensus 296 KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~ 375 (566)
T PLN03225 296 KIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFP 375 (566)
T ss_pred EEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhC
Confidence 99999999765432 3456789999999764321 23456999999999999997
Q ss_pred CCCCCcchhHHh---hhcc-----ccccccccccC------CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 115 KHIPPSHALDLI---RDRN-----LQMLTDSCLEG------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 115 ~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..+......... .... +.....+.... ...........+|+.+||+.||.+|||+.++++
T Consensus 376 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 376 NLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred cCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhC
Confidence 654433211110 0000 00000000000 000111234568999999999999999999986
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=194.33 Aligned_cols=169 Identities=24% Similarity=0.332 Sum_probs=128.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----Cc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----~~ 78 (357)
+++|.+++.. ....+++..+..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++...... ..
T Consensus 81 ~~~l~~~i~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 81 DMDLKKYLDK-RPGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred CcCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 3689999963 2257999999999999999999999999 9999999999999999999999999987654332 23
Q ss_pred cCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc------------------------ccc
Q 018348 79 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN------------------------LQM 133 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~------------------------~~~ 133 (357)
.++..|+|||.+.+. .++.++|+||||+++++|++|..|+............ ...
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 456789999998766 7899999999999999999998777654321110000 000
Q ss_pred cccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....... ...+..+..+.+++.+||..+|++||++.+++.
T Consensus 239 ~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 239 FPPKDLE-KVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cCccchH-HhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000 011123567999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-25 Score=204.38 Aligned_cols=168 Identities=19% Similarity=0.298 Sum_probs=128.4
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCccCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++. ..++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++
T Consensus 103 ~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~ 178 (343)
T cd07851 103 GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVAT 178 (343)
T ss_pred CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEccccccccccccccCCccc
Confidence 678988884 457999999999999999999999999 999999999999999999999999998765433 344578
Q ss_pred CCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc-----------cc--------ccccc-
Q 018348 82 LAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------LT--------DSCLE- 140 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~-----------~~--------~~~~~- 140 (357)
..|++||.+.+ ..++.++||||||+++|+|++|..||............... +. .....
T Consensus 179 ~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (343)
T cd07851 179 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQM 258 (343)
T ss_pred ccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhcccc
Confidence 88999999875 35788999999999999999999887643221110000000 00 00000
Q ss_pred -----CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 141 -----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 141 -----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.......+..+.+++.+||+.+|++|||+.+|+.
T Consensus 259 ~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 259 PKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0001123578999999999999999999999875
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-25 Score=197.70 Aligned_cols=169 Identities=23% Similarity=0.308 Sum_probs=126.6
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-----Cc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 78 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-----~~ 78 (357)
++|.+++.. ....+++..++.++.|++.||.|||..+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 84 ~~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 161 (287)
T cd07840 84 HDLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNR 161 (287)
T ss_pred ccHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCccccccc
Confidence 478888853 2358999999999999999999999999 9999999999999999999999999987654432 23
Q ss_pred cCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc--------------cc---------
Q 018348 79 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------ML--------- 134 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~--------------~~--------- 134 (357)
.++..|+|||.+.+ ..++.++||||||+++|+|++|..|+.............. .+
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (287)
T cd07840 162 VITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPK 241 (287)
T ss_pred ccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhcccc
Confidence 45778999998765 3578899999999999999999988754332111000000 00
Q ss_pred --ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 135 --TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 135 --~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....+...+...++..+.+++++||+.+|.+||++.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 242 KPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000111112578899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.8e-25 Score=198.66 Aligned_cols=170 Identities=19% Similarity=0.255 Sum_probs=123.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------ 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------ 76 (357)
+++|.+++.. ....+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 102 ~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 179 (310)
T cd07865 102 EHDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNR 179 (310)
T ss_pred CcCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCC
Confidence 3577777743 3457899999999999999999999999 9999999999999999999999999887553321
Q ss_pred --CccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhh-------ccccc-------------
Q 018348 77 --SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-------RNLQM------------- 133 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~-------~~~~~------------- 133 (357)
...++..|+|||.+.+. ..+.++||||||+++|+|++|..|+.......... .....
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (310)
T cd07865 180 YTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKK 259 (310)
T ss_pred ccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhh
Confidence 23467889999998764 36889999999999999999997775432111000 00000
Q ss_pred --cccc---cccCCC-CchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 --LTDS---CLEGQF-TDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 --~~~~---~~~~~~-~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.... ...... +......+.++|.+||..||.+|||+.+++.
T Consensus 260 ~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 260 MELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000 000000 0112356789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-25 Score=202.63 Aligned_cols=177 Identities=19% Similarity=0.226 Sum_probs=139.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCc--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-- 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 78 (357)
|+||+|.++|.......+.-...++|+.||+.|++||.+-+ +||||+.+.|+|++.++++||+|||+++..-.+...
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 78999999997654445566677889999999999999999 999999999999999999999999999865444322
Q ss_pred ----cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHH--cCCCCCCcchhHHhhhccccccccccc---cCCCCchhHH
Q 018348 79 ----STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL--SGKHIPPSHALDLIRDRNLQMLTDSCL---EGQFTDDDGT 149 (357)
Q Consensus 79 ----~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~--~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 149 (357)
+-...|||+|.+..++++.+||+|+||+++||++ +...|+.....+..-+.. ..+.+... -...|.-|+.
T Consensus 696 qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~-~~~~~~~~~~~~l~~P~~cp~ 774 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENA-GEFFRDQGRQVVLSRPPACPQ 774 (807)
T ss_pred ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhh-hhhcCCCCcceeccCCCcCcH
Confidence 2357899999999999999999999999999985 456677654433322221 12221111 1234667889
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
.+.++|.+||..+-++|||++++...|...
T Consensus 775 ~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 775 GLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 999999999999999999999998877654
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-25 Score=203.09 Aligned_cols=158 Identities=18% Similarity=0.271 Sum_probs=120.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCccCCCCCCchhhhcC-C
Q 018348 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-G 93 (357)
Q Consensus 16 ~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~gt~~y~aPE~~~~-~ 93 (357)
..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++..... ....++..|+|||.+.+ .
T Consensus 112 ~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 190 (342)
T cd07879 112 HPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWM 190 (342)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCcc
Confidence 46899999999999999999999999 999999999999999999999999998765433 23457888999999876 4
Q ss_pred CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc-------------------ccc---ccccccCC---CCchhH
Q 018348 94 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------------------QML---TDSCLEGQ---FTDDDG 148 (357)
Q Consensus 94 ~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~-------------------~~~---~~~~~~~~---~~~~~~ 148 (357)
.++.++||||||+++|||++|+.||............. ... ........ ..+..+
T Consensus 191 ~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (342)
T cd07879 191 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKAS 270 (342)
T ss_pred ccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCC
Confidence 57889999999999999999998886532111000000 000 00000000 011244
Q ss_pred HHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 149 TELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 149 ~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..+.+++.+||+.||++||++.+++.
T Consensus 271 ~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 271 PQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 67889999999999999999999985
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.9e-25 Score=198.30 Aligned_cols=169 Identities=21% Similarity=0.267 Sum_probs=125.9
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----Ccc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----~~~ 79 (357)
++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...
T Consensus 92 ~~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 169 (309)
T cd07845 92 QDLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKV 169 (309)
T ss_pred CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCccc
Confidence 577787753 2467999999999999999999999999 9999999999999999999999999987654331 223
Q ss_pred CCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-------ccc----------ccccc-
Q 018348 80 TNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------MLT----------DSCLE- 140 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-------~~~----------~~~~~- 140 (357)
++..|+|||.+.+ ..++.++||||||+++|+|++|..|+.............. ... .....
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (309)
T cd07845 170 VTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPK 249 (309)
T ss_pred ccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccC
Confidence 4678999999875 4578899999999999999999988764322111100000 000 00000
Q ss_pred CCC------CchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 141 GQF------TDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 141 ~~~------~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
... ....++.+.++|.+||+.||++|||+.+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 250 QPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred CCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000 0113467889999999999999999999886
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-25 Score=197.14 Aligned_cols=171 Identities=18% Similarity=0.239 Sum_probs=124.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-CCCeEEecCCCccccCCC----CC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG----KS 77 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-~~~~kl~dfg~~~~~~~~----~~ 77 (357)
+++|.+++.......+++..+..++.||+.||.|||+++ ++|+||+|+||+++. ++.+||+|||++...... ..
T Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (294)
T PLN00009 84 DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTH 162 (294)
T ss_pred cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCcccccc
Confidence 357777775444445788899999999999999999999 999999999999985 567999999998754322 23
Q ss_pred ccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-------cc-------cc-----c
Q 018348 78 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------ML-------TD-----S 137 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-------~~-------~~-----~ 137 (357)
..++..|++||++.+. .++.++||||||+++|+|++|..|+.............. .. .+ +
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (294)
T PLN00009 163 EVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFP 242 (294)
T ss_pred CceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcc
Confidence 3567899999998764 478899999999999999999988754322111000000 00 00 0
Q ss_pred ccc----CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 138 CLE----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 138 ~~~----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
... ....+..+..+.+++.+||+.+|++||++.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 243 KWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 0011234567899999999999999999999886
|
|
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-25 Score=196.47 Aligned_cols=170 Identities=19% Similarity=0.261 Sum_probs=123.3
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..... ...
T Consensus 86 ~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 163 (291)
T cd07870 86 HTDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSE 163 (291)
T ss_pred cCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCc
Confidence 3567776643 3456888889999999999999999999 999999999999999999999999988654322 223
Q ss_pred cCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhH--Hhhhc----------------ccc----ccc
Q 018348 79 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDR----------------NLQ----MLT 135 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~--~~~~~----------------~~~----~~~ 135 (357)
.++..|+|||.+.+. .++.++||||||+++|+|++|..||...... .+... ... ...
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (291)
T cd07870 164 VVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWF 243 (291)
T ss_pred cccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhc
Confidence 468899999998753 4788999999999999999999887542211 00000 000 000
Q ss_pred cccccCCC-----CchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 DSCLEGQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 ~~~~~~~~-----~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
........ ....+..+.+++.+|+..||.+|||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 244 LPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000 0012467889999999999999999998864
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=196.61 Aligned_cols=169 Identities=18% Similarity=0.230 Sum_probs=123.4
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-------
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------- 76 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------- 76 (357)
++|.+.+.. ....+++..+..++.|+++||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 99 ~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 176 (311)
T cd07866 99 HDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGG 176 (311)
T ss_pred cCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCC
Confidence 456666643 3457999999999999999999999999 9999999999999999999999999887543221
Q ss_pred --------CccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc----------------
Q 018348 77 --------SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL---------------- 131 (357)
Q Consensus 77 --------~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~---------------- 131 (357)
...++..|+|||.+.+. .++.++||||||+++|+|++|..|+.............
T Consensus 177 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T cd07866 177 GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRS 256 (311)
T ss_pred cccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhh
Confidence 12357789999988754 47889999999999999999998875432211110000
Q ss_pred -cccccccccCCCC-------chhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 132 -QMLTDSCLEGQFT-------DDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 132 -~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
............+ ....+.+.+++.+||+.||.+|||+.+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 257 LPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred cccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000000000011 122357889999999999999999998875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-25 Score=193.10 Aligned_cols=172 Identities=16% Similarity=0.228 Sum_probs=131.7
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC--------------------CCCe
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--------------------DGNP 61 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~--------------------~~~~ 61 (357)
-|-|+.|+|...+-.+++...+..|+.|++++++|||+.. ++|-||||+|||+.+ +..+
T Consensus 173 lG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I 251 (415)
T KOG0671|consen 173 LGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAI 251 (415)
T ss_pred cChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceeccCCCcce
Confidence 3558999997655678999999999999999999999999 999999999999821 2348
Q ss_pred EEecCCCccccCCCC-CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH---hhhccc------
Q 018348 62 RLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNL------ 131 (357)
Q Consensus 62 kl~dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~---~~~~~~------ 131 (357)
+|+|||.++...... +.+.|..|.|||++.+-..+..+||||+||||.||.+|...|..+...+ +.+...
T Consensus 252 ~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~ 331 (415)
T KOG0671|consen 252 KVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSR 331 (415)
T ss_pred EEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHH
Confidence 899999998766554 4567999999999999999999999999999999999988776532111 000000
Q ss_pred ---------------------------ccccccccc----CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 132 ---------------------------QMLTDSCLE----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 132 ---------------------------~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..+.+++.+ ....+.....+.+|+++||..||.+|+|+.|++.
T Consensus 332 mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 332 MIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 000111110 1112334567999999999999999999999875
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-25 Score=212.13 Aligned_cols=168 Identities=18% Similarity=0.202 Sum_probs=138.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
||||+|-..+.+ -.++++..+..++..|+-||.-+|+.| +|||||||+|||||..|.+||+|||.+..+....
T Consensus 157 ~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s 233 (1317)
T KOG0612|consen 157 MPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRS 233 (1317)
T ss_pred ccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEe
Confidence 799999999963 238999999999999999999999999 9999999999999999999999999987766332
Q ss_pred -CccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 77 -SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
..+||+-|.+||+++. +.|++.+|.||+||++|||+.|.-||+.+.........+..-..-.++ ...+.++.
T Consensus 234 ~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP--~~~~VSee 311 (1317)
T KOG0612|consen 234 SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP--DETDVSEE 311 (1317)
T ss_pred ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC--cccccCHH
Confidence 4579999999999964 458999999999999999999999999887776666655542211121 11346788
Q ss_pred HHHHHHHhhhcCCCCCCC---hhhHHH
Q 018348 151 LVRLASRCLQYEPRERPN---PKSLVT 174 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps---~~~i~~ 174 (357)
..+||++.+ .+|+.|.+ +.+|..
T Consensus 312 akdLI~~ll-~~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 312 AKDLIEALL-CDREVRLGRNGIEDIKN 337 (1317)
T ss_pred HHHHHHHHh-cChhhhcccccHHHHHh
Confidence 999998877 46788877 777765
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.8e-25 Score=198.07 Aligned_cols=170 Identities=16% Similarity=0.246 Sum_probs=123.6
Q ss_pred ccHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC----CCCeEEecCCCccccCCC-
Q 018348 4 ETLAKHLFHW---ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGLMKNSRDG- 75 (357)
Q Consensus 4 gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~----~~~~kl~dfg~~~~~~~~- 75 (357)
++|.+++... ....++...+..++.|++.||.|||+.+ ++||||||+||+++. ++.+||+|||++......
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~ 166 (316)
T cd07842 88 HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPL 166 (316)
T ss_pred cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCc
Confidence 4666666422 1247899999999999999999999999 999999999999998 899999999988765332
Q ss_pred ------CCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHH----------hhh----------
Q 018348 76 ------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----------IRD---------- 128 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~----------~~~---------- 128 (357)
....++..|+|||++.+. .++.++||||||+++++|++|..|+....... +..
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 246 (316)
T cd07842 167 KPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTE 246 (316)
T ss_pred ccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCch
Confidence 123567889999988764 47889999999999999999998875332111 000
Q ss_pred ---------ccccccccccccCCCC-----------chhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 129 ---------RNLQMLTDSCLEGQFT-----------DDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 129 ---------~~~~~~~~~~~~~~~~-----------~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..............++ ......+.+++.+||+.||++|||+.+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 247 KDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred hHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000000000011 033457889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=197.41 Aligned_cols=169 Identities=18% Similarity=0.313 Sum_probs=127.3
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCccCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++. ..++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... ....++
T Consensus 93 ~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 168 (328)
T cd07856 93 GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVST 168 (328)
T ss_pred ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCccc
Confidence 568888874 457888899999999999999999999 999999999999999999999999998765433 234578
Q ss_pred CCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHh---------------hhcc----cccccc-cccc
Q 018348 82 LAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---------------RDRN----LQMLTD-SCLE 140 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~---------------~~~~----~~~~~~-~~~~ 140 (357)
..|++||.+.+ ..++.++|+||||+++|+|++|..|+........ .... ...... ....
T Consensus 169 ~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (328)
T cd07856 169 RYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKR 248 (328)
T ss_pred ccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhcccc
Confidence 88999999876 4678999999999999999999988754321100 0000 000000 0000
Q ss_pred CCC-----CchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 141 GQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 141 ~~~-----~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
... .+.++..+.++|++||+.+|++||++.+++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 249 EPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred CCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 011 12345789999999999999999999998753
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=191.78 Aligned_cols=177 Identities=17% Similarity=0.218 Sum_probs=136.9
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----C--CceecCCCCCCeeeCCCCCeEEecCCCccccCC
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-----G--RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 74 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-----~--~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~ 74 (357)
|+|||+|||. ..+++.+..+++++.++.||++||.. | .|.|||||+.|||+..+|.+.|+|+|++.....
T Consensus 292 e~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~ 368 (513)
T KOG2052|consen 292 EHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 368 (513)
T ss_pred cCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecc
Confidence 7899999994 57899999999999999999999952 2 399999999999999999999999999876654
Q ss_pred CC--------CccCCCCCCchhhhcCCC------CCCcccchhHHHHHHHHHcC----------CCCCCcc-----hhHH
Q 018348 75 GK--------SYSTNLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSG----------KHIPPSH-----ALDL 125 (357)
Q Consensus 75 ~~--------~~~gt~~y~aPE~~~~~~------~~~~~Di~slG~vl~el~~g----------~~~~~~~-----~~~~ 125 (357)
.. ..+||..|||||++.... .-..+||||||.|+||+..+ +.||.+. ..+.
T Consensus 369 ~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~ee 448 (513)
T KOG2052|consen 369 DTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEE 448 (513)
T ss_pred cCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHH
Confidence 42 346999999999997531 23369999999999999643 2344332 2233
Q ss_pred hhhccccccccccccCC-CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 126 IRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 126 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+..-....-..|.++.. .+.++...+.++|+.||..||.-|-|+-.|...|.++..
T Consensus 449 MrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 449 MRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 33333333333333333 345677889999999999999999999999999888864
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=194.50 Aligned_cols=170 Identities=16% Similarity=0.269 Sum_probs=126.3
Q ss_pred ccHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 4 ETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 4 gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++...... ...
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (284)
T cd07836 82 KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNE 160 (284)
T ss_pred ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccc
Confidence 58888885432 357999999999999999999999999 999999999999999999999999988754322 223
Q ss_pred cCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc-----------ccc-cccc-----
Q 018348 79 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------LTD-SCLE----- 140 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~----- 140 (357)
.++..|++||++.+. .++.++|+||||+++|+|++|..|+............... +.. +...
T Consensus 161 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd07836 161 VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPR 240 (284)
T ss_pred cccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccC
Confidence 467889999998764 4688999999999999999999887543221110000000 000 0000
Q ss_pred ------CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 141 ------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 141 ------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....+..+..+.+++.+||+.||.+||++.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 241 YPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0011223567889999999999999999998875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-24 Score=212.21 Aligned_cols=172 Identities=19% Similarity=0.286 Sum_probs=137.1
Q ss_pred CCccHHhhhccCC------C--------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCC
Q 018348 2 PNETLAKHLFHWE------T--------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67 (357)
Q Consensus 2 ~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg 67 (357)
++|+|.++|.+.+ . ..++....+.++.||+.|++||++.. +|||||-.+|||+..+..+||+|||
T Consensus 385 ~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~kIaDFG 463 (609)
T KOG0200|consen 385 EHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIKIADFG 463 (609)
T ss_pred cCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEEEcccc
Confidence 6799999997543 0 13899999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCCCCc-----cCC--CCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCC-CCCcch-hHHhhhcccccccccc
Q 018348 68 LMKNSRDGKSY-----STN--LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHA-LDLIRDRNLQMLTDSC 138 (357)
Q Consensus 68 ~~~~~~~~~~~-----~gt--~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~-~~~~~~-~~~~~~~~~~~~~~~~ 138 (357)
+++...+.... .++ ..|||||.+....++.+|||||||+++|||++... |+++.. .... .......
T Consensus 464 lar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l-----~~~l~~G 538 (609)
T KOG0200|consen 464 LARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEEL-----LEFLKEG 538 (609)
T ss_pred ceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHH-----HHHHhcC
Confidence 99865443322 222 34999999999889999999999999999998554 444311 1111 1122333
Q ss_pred ccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 139 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 139 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
.+...|..|..++..+|+.||+.+|++||++.++++.++..
T Consensus 539 ~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 539 NRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 34455667788999999999999999999999999999884
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=199.13 Aligned_cols=168 Identities=16% Similarity=0.228 Sum_probs=127.2
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCccCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++. .+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++...... ....++
T Consensus 103 ~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 178 (343)
T cd07880 103 GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVT 178 (343)
T ss_pred CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccccccccCccccccC
Confidence 567777773 457999999999999999999999999 999999999999999999999999998765443 234678
Q ss_pred CCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc-------------------cccccc--cc
Q 018348 82 LAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------------------QMLTDS--CL 139 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~-------------------~~~~~~--~~ 139 (357)
..|++||.+.+ ..++.++|+||||+++++|++|..|+............. ...... ..
T Consensus 179 ~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (343)
T cd07880 179 RWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRF 258 (343)
T ss_pred CcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhcccc
Confidence 89999999876 357889999999999999999998876432111000000 000000 00
Q ss_pred ----cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 140 ----EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 140 ----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.......++..+.+++.+|++.||++|||+.+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 259 RKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred CcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00111234567899999999999999999999884
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-25 Score=202.19 Aligned_cols=165 Identities=24% Similarity=0.324 Sum_probs=140.3
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCc
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSY 78 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~ 78 (357)
.+|.+++||+ +.+.+....+-.++.|++.+++|||+++ |||||||.+||||+.+.++||+|||++.++... .++
T Consensus 138 ~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~ 214 (596)
T KOG0586|consen 138 SGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTF 214 (596)
T ss_pred cCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeeccccccccc
Confidence 4789999997 5677877999999999999999999999 999999999999999999999999999887654 477
Q ss_pred cCCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 79 STNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
+|++.|.|||++.+..+ ++..|+||+|+++|-|+.|..||.+........+...... .++.....++.+++++
T Consensus 215 cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~------rIp~~ms~dce~lLrk 288 (596)
T KOG0586|consen 215 CGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY------RIPFYMSCDCEDLLRK 288 (596)
T ss_pred CCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee------cccceeechhHHHHHH
Confidence 89999999999998665 7799999999999999999999987665554444433321 2344455789999999
Q ss_pred hhhcCCCCCCChhhHHHH
Q 018348 158 CLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 158 cl~~~p~~Rps~~~i~~~ 175 (357)
+|..+|.+|+++.+|...
T Consensus 289 ~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 289 FLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred hhccCccccCCHHHhhhh
Confidence 999999999999998763
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-24 Score=194.36 Aligned_cols=169 Identities=20% Similarity=0.233 Sum_probs=124.0
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-----Cc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 78 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-----~~ 78 (357)
++|.+.+.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++....... ..
T Consensus 100 ~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 177 (302)
T cd07864 100 HDLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNK 177 (302)
T ss_pred ccHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccc
Confidence 466666643 2457999999999999999999999999 9999999999999999999999999887654322 12
Q ss_pred cCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-----------ccccccc-------
Q 018348 79 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------MLTDSCL------- 139 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-----------~~~~~~~------- 139 (357)
.++..|++||++.+. ..+.++||||||+++++|++|+.|+.............. .+.....
T Consensus 178 ~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T cd07864 178 VITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPK 257 (302)
T ss_pred eeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccc
Confidence 356789999988653 468899999999999999999977754321110000000 0000000
Q ss_pred c------CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 140 E------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 140 ~------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
. .......+..+.+++.+||+.+|++||++.+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 258 KQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 0001124578999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.4e-25 Score=187.80 Aligned_cols=157 Identities=20% Similarity=0.300 Sum_probs=129.7
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCcccc-C---CCCC
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-R---DGKS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~-~---~~~~ 77 (357)
.||.|.-.|. ....+++.....+...|+.||.|||+++ ||.||+|.+|+++|.+|.+||.|||+++.- . ..++
T Consensus 251 nGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kT 327 (516)
T KOG0690|consen 251 NGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKT 327 (516)
T ss_pred cCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhcccccceecc
Confidence 4677777774 3568999988999999999999999999 999999999999999999999999998752 2 2357
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
++||+.|+|||++....++.+.|.|.+|||+|||++|+.||.......+-.-.... .-.+|...+++...|+.-
T Consensus 328 FCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e------d~kFPr~ls~eAktLLsG 401 (516)
T KOG0690|consen 328 FCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME------DLKFPRTLSPEAKTLLSG 401 (516)
T ss_pred ccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh------hccCCccCCHHHHHHHHH
Confidence 89999999999999999999999999999999999999999865433222111111 123455666888999999
Q ss_pred hhhcCCCCCC
Q 018348 158 CLQYEPRERP 167 (357)
Q Consensus 158 cl~~~p~~Rp 167 (357)
.|..||.+|.
T Consensus 402 LL~kdP~kRL 411 (516)
T KOG0690|consen 402 LLKKDPKKRL 411 (516)
T ss_pred HhhcChHhhc
Confidence 9999999994
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.7e-24 Score=184.61 Aligned_cols=167 Identities=23% Similarity=0.276 Sum_probs=131.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
+++++|.+++.. ...+++..+..++.+++.++.|||..+ ++|+||+|.||+++.++.++++|||.+...... ..
T Consensus 69 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~ 145 (244)
T smart00220 69 CDGGDLFDLLKK--RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTT 145 (244)
T ss_pred CCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeecccccccc
Confidence 356799999963 234899999999999999999999999 999999999999999999999999998776553 34
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCc-chhHHhhhccccccccccccCCCCc-hhHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQMLTDSCLEGQFTD-DDGTELVRLA 155 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li 155 (357)
..++..|++||.+.+...+.++||||||+++++|++|..|+.. ............. ........ .++..+.+++
T Consensus 146 ~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i 221 (244)
T smart00220 146 FVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKP----KPPFPPPEWKISPEAKDLI 221 (244)
T ss_pred ccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc----CCCCccccccCCHHHHHHH
Confidence 5678899999999877888999999999999999999887754 2111111111111 00000000 1457899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||..+|++||++.++++
T Consensus 222 ~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 222 RKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHccCCchhccCHHHHhh
Confidence 9999999999999999886
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=197.90 Aligned_cols=169 Identities=18% Similarity=0.228 Sum_probs=126.4
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC--------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-------- 74 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~-------- 74 (357)
.|+|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 103 ~~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 179 (335)
T PTZ00024 103 ASDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLS 179 (335)
T ss_pred ccCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCccceeeccccccccccc
Confidence 468888885 3567999999999999999999999999 99999999999999999999999998875541
Q ss_pred ------C----CCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccc---cc----
Q 018348 75 ------G----KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---TD---- 136 (357)
Q Consensus 75 ------~----~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~---~~---- 136 (357)
. ....++..|++||.+.+. .++.++|+||||+++|+|++|..|+................ ..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 259 (335)
T PTZ00024 180 KDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWP 259 (335)
T ss_pred ccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCc
Confidence 0 112357789999998764 46889999999999999999998876543211110000000 00
Q ss_pred ---------------ccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 137 ---------------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 137 ---------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+..........+..+.+++.+||+.+|++|||+.+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 260 QAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred chhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 00000011223567899999999999999999999986
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=198.22 Aligned_cols=167 Identities=17% Similarity=0.228 Sum_probs=122.1
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC-CCCCeEEecCCCccccCCC-------
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG------- 75 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~-~~~~~kl~dfg~~~~~~~~------- 75 (357)
++|.+++. .+.+++..+..++.|++.||.|||+.+ ++||||||+||+++ .++.++++|||.+......
T Consensus 100 ~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 175 (342)
T cd07854 100 TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYL 175 (342)
T ss_pred ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCcccceecCCcccccccc
Confidence 57777773 457899999999999999999999999 99999999999997 4567899999988654321
Q ss_pred CCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc---------------ccccc---
Q 018348 76 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL---------------QMLTD--- 136 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~---------------~~~~~--- 136 (357)
....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||............. .....
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (342)
T cd07854 176 SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVR 255 (342)
T ss_pred ccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhh
Confidence 12246788999998754 457889999999999999999998885432110000000 00000
Q ss_pred -ccccC-----CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 137 -SCLEG-----QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 137 -~~~~~-----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..... ......+.++.+++.+||+.||.+|||+.+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 256 NDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00000 011234467889999999999999999999985
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-24 Score=174.52 Aligned_cols=112 Identities=17% Similarity=0.260 Sum_probs=97.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--C-ccCCCCCCchhhh
Q 018348 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--S-YSTNLAFTPPEYL 90 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~--~-~~gt~~y~aPE~~ 90 (357)
+++.+++...=+|+..++.||.|||++-.++|||+||+|||++.+|++|+||||++-...++- + ..|...|||||.+
T Consensus 141 ~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri 220 (282)
T KOG0984|consen 141 KGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERI 220 (282)
T ss_pred cCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhc
Confidence 578899999999999999999999998779999999999999999999999999987665542 2 4578899999988
Q ss_pred cCC----CCCCcccchhHHHHHHHHHcCCCCCCcchhHH
Q 018348 91 RTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL 125 (357)
Q Consensus 91 ~~~----~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~ 125 (357)
..+ .|+.||||||||+++.||.+++.|+..+....
T Consensus 221 ~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF 259 (282)
T KOG0984|consen 221 NPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPF 259 (282)
T ss_pred CcccCcccceeehhhhhhhhhhhhhhhccccccccCCHH
Confidence 652 58999999999999999999999987765544
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-24 Score=193.04 Aligned_cols=159 Identities=20% Similarity=0.270 Sum_probs=133.6
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---Ccc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~~~ 79 (357)
||.|-..|. ..+.++..+...++..+++|++|||.++ ||.|||||+|++++.+|-+||.|||+++....+. +++
T Consensus 504 GGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFc 580 (732)
T KOG0614|consen 504 GGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFC 580 (732)
T ss_pred Cchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccCCceeeec
Confidence 677777775 4678999999999999999999999999 9999999999999999999999999999887664 578
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
||+.|.|||.+.....+.+.|.||||+++|||++|.+||.+..........+..+-. -.+|..++....+||++..
T Consensus 581 GTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~----i~~Pr~I~k~a~~Lik~LC 656 (732)
T KOG0614|consen 581 GTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK----IEFPRRITKTATDLIKKLC 656 (732)
T ss_pred CCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh----hhcccccchhHHHHHHHHH
Confidence 999999999999888899999999999999999999998775444443333333221 2345556678899999999
Q ss_pred hcCCCCCCC
Q 018348 160 QYEPRERPN 168 (357)
Q Consensus 160 ~~~p~~Rps 168 (357)
..+|.+|..
T Consensus 657 r~~P~ERLG 665 (732)
T KOG0614|consen 657 RDNPTERLG 665 (732)
T ss_pred hcCcHhhhc
Confidence 999999965
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.1e-24 Score=185.39 Aligned_cols=173 Identities=20% Similarity=0.240 Sum_probs=137.3
Q ss_pred CccHHhhhccC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC
Q 018348 3 NETLAKHLFHW------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 76 (357)
Q Consensus 3 ~gsL~~~l~~~------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~ 76 (357)
=|+|+.+|... ..+.++-.+...++.|++.|++|||..+ +||.||..+|++||+..++||+|=.+++..-+..
T Consensus 372 ~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~D 450 (563)
T KOG1024|consen 372 VGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGD 450 (563)
T ss_pred cchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhccccCccc
Confidence 37888888622 1356788888999999999999999999 9999999999999999999999999888765543
Q ss_pred Cc------cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 77 SY------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 77 ~~------~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
-. -....||+||.+....++.++|+|||||++|||+|-...+..+... ..+........+-..|..|+.+
T Consensus 451 YhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP----fEm~~ylkdGyRlaQP~NCPDe 526 (563)
T KOG1024|consen 451 YHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP----FEMEHYLKDGYRLAQPFNCPDE 526 (563)
T ss_pred ccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH----HHHHHHHhccceecCCCCCcHH
Confidence 22 2356799999999999999999999999999999844333322211 1122223333445567788999
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
+..+|..||...|++||++++++..|..+.
T Consensus 527 Lf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 527 LFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred HHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 999999999999999999999999887653
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.4e-24 Score=180.65 Aligned_cols=104 Identities=18% Similarity=0.313 Sum_probs=91.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC----CCeEEecCCCccccCCC-------CCccCCCC
Q 018348 15 THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED----GNPRLSTFGLMKNSRDG-------KSYSTNLA 83 (357)
Q Consensus 15 ~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~----~~~kl~dfg~~~~~~~~-------~~~~gt~~ 83 (357)
.+.++...+..|+-||+.|+.|||+++ |+||||||.||++-.+ |+|||+|||+++.+... ...+-|++
T Consensus 126 ~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiW 204 (438)
T KOG0666|consen 126 AKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIW 204 (438)
T ss_pred hccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEE
Confidence 467899999999999999999999999 9999999999999766 89999999999876543 22345899
Q ss_pred CCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCC
Q 018348 84 FTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPP 119 (357)
Q Consensus 84 y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~ 119 (357)
|.|||++.+. .++.+.|||++||++.||+|-++.|.
T Consensus 205 YRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 205 YRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred ecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 9999999985 58999999999999999999876654
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=184.42 Aligned_cols=158 Identities=20% Similarity=0.321 Sum_probs=130.8
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CCC
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~~ 77 (357)
.||+|--.|. +-+.+-+..+.-++.+|+-||-+||+++ ||.||||..||+++.+|.+||+|||+++.--. ..+
T Consensus 433 nGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkT 509 (683)
T KOG0696|consen 433 NGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKT 509 (683)
T ss_pred cCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCCcceee
Confidence 5777766664 4567888889999999999999999999 99999999999999999999999999875332 246
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
++||+.|+|||.+..++|+.+.|.|||||++|||+.|++||.++....+- +.+.+.. -.+|...+.+...+...
T Consensus 510 FCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF----~aI~ehn--vsyPKslSkEAv~ickg 583 (683)
T KOG0696|consen 510 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF----QAIMEHN--VSYPKSLSKEAVAICKG 583 (683)
T ss_pred ecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHHcc--CcCcccccHHHHHHHHH
Confidence 78999999999999999999999999999999999999999876443322 2222221 24566677888999999
Q ss_pred hhhcCCCCCCC
Q 018348 158 CLQYEPRERPN 168 (357)
Q Consensus 158 cl~~~p~~Rps 168 (357)
.|...|.+|..
T Consensus 584 ~ltK~P~kRLG 594 (683)
T KOG0696|consen 584 LLTKHPGKRLG 594 (683)
T ss_pred HhhcCCccccC
Confidence 99999999943
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.6e-24 Score=199.34 Aligned_cols=174 Identities=18% Similarity=0.246 Sum_probs=143.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCcc-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS- 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~- 79 (357)
||+|+|.||++. ...++.-+..+.|..||++|+.|||.+. ++||||-.+||||.....+||.|||+++...+.....
T Consensus 779 mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~ 856 (1177)
T KOG1025|consen 779 MPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS 856 (1177)
T ss_pred cccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence 799999999964 5678999999999999999999999998 9999999999999999999999999999877654322
Q ss_pred -----CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 80 -----TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 80 -----gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
-.+.|||-|.++...++.++|||||||++||++| |..|+.......+ ..+.....+...|+.|+-++..
T Consensus 857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI-----~dlle~geRLsqPpiCtiDVy~ 931 (1177)
T KOG1025|consen 857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI-----PDLLEKGERLSQPPICTIDVYM 931 (1177)
T ss_pred ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh-----hHHHhccccCCCCCCccHHHHH
Confidence 1456999999999999999999999999999987 6666654433322 2233333344567778899999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
++.+||..|+..||+++++...+..+..
T Consensus 932 ~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 932 VMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred HHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 9999999999999999998887765544
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-23 Score=193.01 Aligned_cols=175 Identities=20% Similarity=0.234 Sum_probs=130.4
Q ss_pred CCCccHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC--CCC--CeEEecCCCccccCCC
Q 018348 1 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDG--NPRLSTFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~--~~~--~~kl~dfg~~~~~~~~ 75 (357)
..||||..+|.+-++ .+|++...+.++.+++.||.|||+++ |+||||||.||++- .+| .-||+|||.++...+.
T Consensus 99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~ 177 (732)
T KOG4250|consen 99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN 177 (732)
T ss_pred cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccCCCC
Confidence 369999999976544 68999999999999999999999999 99999999999983 344 4899999999998877
Q ss_pred C---CccCCCCCCchhhhc-CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH----hhhccc----------------
Q 018348 76 K---SYSTNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IRDRNL---------------- 131 (357)
Q Consensus 76 ~---~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~----~~~~~~---------------- 131 (357)
. +.+||..|++||+.. ...++...|.|||||++|+..||..||-+..... ......
T Consensus 178 s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eN 257 (732)
T KOG4250|consen 178 SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEEN 257 (732)
T ss_pred CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccC
Confidence 4 568999999999998 4778999999999999999999999985432211 000000
Q ss_pred ---cccccccccCCCCchhHHHHHHHHHHhhhcCCCCCC--ChhhHHHHh
Q 018348 132 ---QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP--NPKSLVTAL 176 (357)
Q Consensus 132 ---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp--s~~~i~~~L 176 (357)
..-..-..+..........+..++..+|..+|.+|- ++.+....+
T Consensus 258 gpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~ 307 (732)
T KOG4250|consen 258 GPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEV 307 (732)
T ss_pred CceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHH
Confidence 000000001112223345677888899999999997 554444333
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-23 Score=174.03 Aligned_cols=112 Identities=24% Similarity=0.297 Sum_probs=108.1
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
+....|+.++.+|+.+++.++|++|+..|++||+++|+ ++.+|.|||.+|.++|+++.|+++++.||.+||.+.++|.+
T Consensus 76 e~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~R 154 (304)
T KOG0553|consen 76 EDKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGR 154 (304)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHH
Confidence 46678999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+|.+|..+|+|++|++.|++||+|||++...|+
T Consensus 155 LG~A~~~~gk~~~A~~aykKaLeldP~Ne~~K~ 187 (304)
T KOG0553|consen 155 LGLAYLALGKYEEAIEAYKKALELDPDNESYKS 187 (304)
T ss_pred HHHHHHccCcHHHHHHHHHhhhccCCCcHHHHH
Confidence 999999999999999999999999999986654
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.7e-23 Score=169.35 Aligned_cols=167 Identities=22% Similarity=0.309 Sum_probs=121.5
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCc-------
Q 018348 6 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY------- 78 (357)
Q Consensus 6 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~------- 78 (357)
|...|-. ....++..++.+++.++..||.|+|... |+|||+|+.|+||+.+|.+||+|||+++.++.....
T Consensus 110 LaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytn 187 (376)
T KOG0669|consen 110 LAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTN 187 (376)
T ss_pred HHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCccc
Confidence 4444421 2357899999999999999999999998 999999999999999999999999999876544321
Q ss_pred -cCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchh-------------------HHhhhccc-cccc-
Q 018348 79 -STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL-------------------DLIRDRNL-QMLT- 135 (357)
Q Consensus 79 -~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~-------------------~~~~~~~~-~~~~- 135 (357)
+-|++|.+||.+.+. .++++.|||.-|||+.||++|.+.+.+.+. ........ +.+.
T Consensus 188 rvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ 267 (376)
T KOG0669|consen 188 RVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIEL 267 (376)
T ss_pred ceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccC
Confidence 238999999999874 589999999999999999999876544211 00000000 0010
Q ss_pred cccccCCC--------CchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 DSCLEGQF--------TDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 ~~~~~~~~--------~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+...+.+ |-.-.++..+|+.+++..||.+|+.+.+++.
T Consensus 268 ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 268 EPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred CCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 00001110 0001246788999999999999999998875
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=200.92 Aligned_cols=67 Identities=24% Similarity=0.386 Sum_probs=61.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 70 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~ 70 (357)
++||+|.++|. ..+.+++..++.|+.||+.||.|||..+ |+||||||+|||++.++.++|+|||+++
T Consensus 86 ~~g~~L~~li~--~~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 86 LIGGDVKSLLH--IYGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 46899999996 3457899999999999999999999999 9999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-23 Score=197.03 Aligned_cols=165 Identities=24% Similarity=0.248 Sum_probs=118.6
Q ss_pred ccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC---C--CCeEEecCCCccccCCCC
Q 018348 4 ETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---D--GNPRLSTFGLMKNSRDGK 76 (357)
Q Consensus 4 gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~---~--~~~kl~dfg~~~~~~~~~ 76 (357)
-||.|++... ......-...+.++.|++.||++||+.+ ||||||||.||||+. + .+++|+|||+++....++
T Consensus 587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 3788888542 1111111345788999999999999998 999999999999975 3 469999999999876543
Q ss_pred -------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcC-CCCCCcchhHHhhhccccccccccccCCCCchhH
Q 018348 77 -------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 148 (357)
Q Consensus 77 -------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (357)
...||-+|+|||+++....+.+.||||+|||+|+.++| ..||....... .. .......- .......++
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-~N-Il~~~~~L-~~L~~~~d~- 741 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-AN-ILTGNYTL-VHLEPLPDC- 741 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-hh-hhcCccce-eeeccCchH-
Confidence 34589999999999988888899999999999999988 55654432111 00 00000000 000111122
Q ss_pred HHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 149 TELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 149 ~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...+||.+|++.+|..||++.+|+.
T Consensus 742 -eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 742 -EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 7789999999999999999999874
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-22 Score=187.33 Aligned_cols=158 Identities=21% Similarity=0.284 Sum_probs=122.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
||||++-.+|- +.+.|.+..+..++.++.+|+++.|..| +|||||||+|||||.+|.+||.|||++.-+.-.
T Consensus 711 IPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 711 IPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred cCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeeccccccceecccccc
Confidence 68999999986 5678999999999999999999999999 999999999999999999999999997643200
Q ss_pred -----------------------------------------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcC
Q 018348 76 -----------------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114 (357)
Q Consensus 76 -----------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g 114 (357)
...+||..|+|||++....++..+|.||.||||+||+.|
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g 867 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG 867 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC
Confidence 013489999999999988899999999999999999999
Q ss_pred CCCCCcchhHHh--hhccccccccccccCCCCchhHHHHHHHHHH-hhhcCCCCCC
Q 018348 115 KHIPPSHALDLI--RDRNLQMLTDSCLEGQFTDDDGTELVRLASR-CLQYEPRERP 167 (357)
Q Consensus 115 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~-cl~~~p~~Rp 167 (357)
+.||...+.... +-.++....+....+.++ .++.++|.+ |. +++.|.
T Consensus 868 ~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls----~e~~~li~kLc~--sad~RL 917 (1034)
T KOG0608|consen 868 QPPFLADTPGETQYKVINWRNFLHIPYQGNLS----KEALDLIQKLCC--SADSRL 917 (1034)
T ss_pred CCCccCCCCCcceeeeeehhhccccccccccC----HHHHHHHHHHhc--Chhhhh
Confidence 999876554332 222334444444444444 444555543 33 345563
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.4e-23 Score=174.09 Aligned_cols=157 Identities=17% Similarity=0.242 Sum_probs=120.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCccCCCCCCchhhhcCC
Q 018348 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTG 93 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~ 93 (357)
.++.+++..|+.|++.|+.|||+.+ |+||||||+||++..++.+||.|||+++.-... +..+.|+.|.|||++.+-
T Consensus 114 elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~ 192 (369)
T KOG0665|consen 114 ELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGM 192 (369)
T ss_pred hcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheecc
Confidence 4677888999999999999999999 999999999999999999999999999875544 334678899999999987
Q ss_pred CCCCcccchhHHHHHHHHHcCCCCCCcchh---------------------------------HHhhhccccc-cccccc
Q 018348 94 RVTPESVIYSFGTLLLDLLSGKHIPPSHAL---------------------------------DLIRDRNLQM-LTDSCL 139 (357)
Q Consensus 94 ~~~~~~Di~slG~vl~el~~g~~~~~~~~~---------------------------------~~~~~~~~~~-~~~~~~ 139 (357)
.+....||||+||++.||++|...|++... .......... ..+...
T Consensus 193 ~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f 272 (369)
T KOG0665|consen 193 GYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLF 272 (369)
T ss_pred CCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccc
Confidence 799999999999999999999987765200 0000000011 111111
Q ss_pred cC--CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 140 EG--QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 140 ~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+. ..++..+....+++.+||..||++|.|+++++.
T Consensus 273 ~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 273 PVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred cccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 11 111223445789999999999999999999886
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=172.14 Aligned_cols=171 Identities=22% Similarity=0.252 Sum_probs=127.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC---CCeEEecCCCccccC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSR---- 73 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~---~~~kl~dfg~~~~~~---- 73 (357)
|.||+|-..|. +...+++.++-++..+|+.||.|||.++ |.||||||+|||-.+. .-+|||||.+..-..
T Consensus 158 m~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~ 234 (463)
T KOG0607|consen 158 MRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND 234 (463)
T ss_pred ccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeeccccccccccCCC
Confidence 67999999997 5678999999999999999999999999 9999999999998543 359999996643221
Q ss_pred -------CCCCccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHH--hhhcccc-----cc
Q 018348 74 -------DGKSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--IRDRNLQ-----ML 134 (357)
Q Consensus 74 -------~~~~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~--~~~~~~~-----~~ 134 (357)
...+.+|+..|||||+..- ..|+.++|.||||||+|-|++|-+||.+.-... |..+... .+
T Consensus 235 ~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~L 314 (463)
T KOG0607|consen 235 CSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKL 314 (463)
T ss_pred CCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHH
Confidence 1124568889999997632 358889999999999999999999987643211 1111111 11
Q ss_pred ccccccCC--C----CchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 135 TDSCLEGQ--F----TDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 135 ~~~~~~~~--~----~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...+..+. + +..++.+..+++...+..|+.+|.++..++.
T Consensus 315 FesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 315 FESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 11111111 2 2345678899999999999999988877764
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.2e-23 Score=171.43 Aligned_cols=169 Identities=19% Similarity=0.298 Sum_probs=122.3
Q ss_pred cHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC-----cc
Q 018348 5 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----YS 79 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~-----~~ 79 (357)
+|++.|+ ..++++...+.-.+.||++||.|||+.+ |+||||||.|+|++.+..+||||||+++....... .+
T Consensus 142 DLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEV 218 (449)
T KOG0664|consen 142 DLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEV 218 (449)
T ss_pred hhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHH
Confidence 4566665 4678999999999999999999999999 99999999999999999999999999997665432 23
Q ss_pred CCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchh----------------HHh-------hhccccc-c
Q 018348 80 TNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL----------------DLI-------RDRNLQM-L 134 (357)
Q Consensus 80 gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~----------------~~~-------~~~~~~~-~ 134 (357)
-|..|.+||.+.+. .++.+.||||.||++.||+.++..|..... +.+ +...... .
T Consensus 219 VTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~ 298 (449)
T KOG0664|consen 219 VTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGL 298 (449)
T ss_pred HHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCC
Confidence 47789999999874 589999999999999999988766532110 000 0000000 0
Q ss_pred ccccccCCC----CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHh
Q 018348 135 TDSCLEGQF----TDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176 (357)
Q Consensus 135 ~~~~~~~~~----~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L 176 (357)
..+...-.+ +..-..+...+..+++..||++|.+.++....+
T Consensus 299 k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 299 RAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred CCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 011111111 112224566788899999999998888776654
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-22 Score=177.79 Aligned_cols=169 Identities=20% Similarity=0.306 Sum_probs=128.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCCCCeeeC---CCCCeEEecCCCccccCCCC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~~~H~dlk~~Nill~---~~~~~kl~dfg~~~~~~~~~ 76 (357)
+||.+|+=||. ..+.+++.++..|+.||+.||.||.+.. ||||=||||.|||+. .-|.+||.|||+++.+....
T Consensus 550 ceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddS 627 (775)
T KOG1151|consen 550 CEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDS 627 (775)
T ss_pred cCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCc
Confidence 47888888885 5678999999999999999999999865 799999999999995 34789999999999876542
Q ss_pred -----------CccCCCCCCchhhhcCC----CCCCcccchhHHHHHHHHHcCCCCCCcchh--HHhhhccccccccccc
Q 018348 77 -----------SYSTNLAFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNLQMLTDSCL 139 (357)
Q Consensus 77 -----------~~~gt~~y~aPE~~~~~----~~~~~~Di~slG~vl~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~~ 139 (357)
...||.+|++||++--+ +.+.|.||||+||++|..+.|+.||..... +.+....+.....-.+
T Consensus 628 y~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqF 707 (775)
T KOG1151|consen 628 YNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQF 707 (775)
T ss_pred cCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccC
Confidence 23589999999988643 468899999999999999999999875422 1122222222111111
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHH
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 173 (357)
+..+..+.+...+|++||++.-++|....++.
T Consensus 708 --P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 708 --PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred --CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 12233457889999999999999997666554
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-22 Score=192.16 Aligned_cols=169 Identities=12% Similarity=0.168 Sum_probs=138.7
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CC
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~ 77 (357)
-|||..|++....+..+.|+.+.-|++.++.|+.+||... ++|||||-.|||+..+|.||++|||++...... .+
T Consensus 104 ~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT 182 (953)
T KOG0587|consen 104 GGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNT 182 (953)
T ss_pred CCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeecccccccC
Confidence 4899999997767789999999999999999999999998 999999999999999999999999998765543 36
Q ss_pred ccCCCCCCchhhhcCC-----CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 78 YSTNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-----~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
.+||+.|||||++... .++.++|+||||++..||-.|.+|+...-... -.+.....|......|.....++.
T Consensus 183 ~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---aLF~IpRNPPPkLkrp~kWs~~Fn 259 (953)
T KOG0587|consen 183 FIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---ALFLIPRNPPPKLKRPKKWSKKFN 259 (953)
T ss_pred cCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh---hhccCCCCCCccccchhhHHHHHH
Confidence 6899999999999763 36779999999999999999987654321111 112223333444455777889999
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
++|..||..|..+||++.+++.
T Consensus 260 dFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 260 DFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred HHHHHHHhhccccCcchhhhcc
Confidence 9999999999999999988765
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.2e-22 Score=185.94 Aligned_cols=173 Identities=16% Similarity=0.156 Sum_probs=120.2
Q ss_pred CCCccHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC
Q 018348 1 MPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 58 (357)
Q Consensus 1 ~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~ 58 (357)
|+||||.++|+... ...+++..+..|+.|++.||.|||+.+ ++||||||+||+++.+
T Consensus 267 ~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~ 345 (507)
T PLN03224 267 ESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVD 345 (507)
T ss_pred CCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCC
Confidence 57889988886321 123467788999999999999999999 9999999999999999
Q ss_pred CCeEEecCCCccccCCCCC-----ccCCCCCCchhhhcCCC----------------------CCCcccchhHHHHHHHH
Q 018348 59 GNPRLSTFGLMKNSRDGKS-----YSTNLAFTPPEYLRTGR----------------------VTPESVIYSFGTLLLDL 111 (357)
Q Consensus 59 ~~~kl~dfg~~~~~~~~~~-----~~gt~~y~aPE~~~~~~----------------------~~~~~Di~slG~vl~el 111 (357)
+.+||+|||+++....... ..+|+.|++||.+.... ...+.|+||+||++++|
T Consensus 346 ~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em 425 (507)
T PLN03224 346 GQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQM 425 (507)
T ss_pred CcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHH
Confidence 9999999999875443221 23478899999875422 12357999999999999
Q ss_pred HcCCC-CCCcch--hHHhhh--cc---ccccccccccCCCCchhHHHHHHHHHHhhhcCC---CCCCChhhHHH
Q 018348 112 LSGKH-IPPSHA--LDLIRD--RN---LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP---RERPNPKSLVT 174 (357)
Q Consensus 112 ~~g~~-~~~~~~--~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p---~~Rps~~~i~~ 174 (357)
++|.. |+.... ...... .. +.........-......+....+++.+||..+| .+|+|+.+++.
T Consensus 426 ~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 426 CVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred HhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 99875 332110 000000 00 001111111111223455788999999999866 68999999886
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.3e-23 Score=184.08 Aligned_cols=166 Identities=19% Similarity=0.197 Sum_probs=133.2
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC---CCeEEecCCCccccCCC---C
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDG---K 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~---~~~kl~dfg~~~~~~~~---~ 76 (357)
+|+.-++|...+.+.++++....++.||+.||.|||.++ |+|+||||+|||+.+. .++||||||+++.++.. .
T Consensus 646 ~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRr 724 (888)
T KOG4236|consen 646 HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRR 724 (888)
T ss_pred cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhh
Confidence 567777777778899999999999999999999999999 9999999999999643 47999999999987654 4
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
+.+||+.|+|||+++...+...-|+||.||++|--++|..||..+. .+....... ....+...+.++.+..+++|.
T Consensus 725 sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNA--aFMyPp~PW~eis~~AidlIn 800 (888)
T KOG4236|consen 725 SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNA--AFMYPPNPWSEISPEAIDLIN 800 (888)
T ss_pred hhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chhHHhhcc--ccccCCCchhhcCHHHHHHHH
Confidence 6789999999999999899999999999999999999987775432 121111111 111223334566788999999
Q ss_pred HhhhcCCCCCCChhhHH
Q 018348 157 RCLQYEPRERPNPKSLV 173 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~ 173 (357)
..|+..-.+|-|....+
T Consensus 801 ~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 801 NLLQVKMRKRYSVDKSL 817 (888)
T ss_pred HHHHHHHHHhcchHhhc
Confidence 99999999998876544
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.8e-22 Score=169.29 Aligned_cols=163 Identities=17% Similarity=0.293 Sum_probs=126.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC-C---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-D---GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~-~---~~ 76 (357)
++||+|-=.+. ..+.++++.+..+...|+-||.|||+.+ ||.||||..|||+|..|.+|+.|+|+++.-- + ..
T Consensus 333 v~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~gd~ts 409 (593)
T KOG0695|consen 333 VNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTS 409 (593)
T ss_pred ecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCCCcccc
Confidence 46676653332 3467999999999999999999999999 9999999999999999999999999987532 2 24
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcch----hHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA----LDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
+++||+.|.|||.+++..+....|.|+|||+++||+.|+.||.-.. .........+.+....+ .+|...+....
T Consensus 410 tfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--riprslsvkas 487 (593)
T KOG0695|consen 410 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPRSLSVKAS 487 (593)
T ss_pred cccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--cccceeehhhH
Confidence 6789999999999999999999999999999999999999875211 11111122222333222 23444556677
Q ss_pred HHHHHhhhcCCCCCCC
Q 018348 153 RLASRCLQYEPRERPN 168 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps 168 (357)
.+++..|+.||.+|..
T Consensus 488 ~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 488 HVLKGFLNKDPKERLG 503 (593)
T ss_pred HHHHHhhcCCcHHhcC
Confidence 8999999999999943
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-21 Score=162.79 Aligned_cols=175 Identities=19% Similarity=0.216 Sum_probs=141.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceec-CCCCCCeeeCCCCCeEEecCCCccccCCCCCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~-dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 79 (357)
||.|||+..|++..+-.++..++.+.+.++++|+.|||+..+++-| .|++..+++|++.+.+|+- +-.++..+.....
T Consensus 269 mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarism-ad~kfsfqe~gr~ 347 (448)
T KOG0195|consen 269 MPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISM-ADTKFSFQEVGRA 347 (448)
T ss_pred ccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheec-ccceeeeeccccc
Confidence 7999999999876666788899999999999999999999877777 7999999999998887742 3333333344445
Q ss_pred CCCCCCchhhhcCCC---CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 80 TNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 80 gt~~y~aPE~~~~~~---~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
..+.||+||.++..+ .-.++|+|||.+++|||.|+..||......+.+-+. .-..++..+|+..+..+.+|+.
T Consensus 348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki----aleglrv~ippgis~hm~klm~ 423 (448)
T KOG0195|consen 348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI----ALEGLRVHIPPGISRHMNKLMN 423 (448)
T ss_pred cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh----hhccccccCCCCccHHHHHHHH
Confidence 578999999998654 344799999999999999999999876655444322 2234556677788899999999
Q ss_pred HhhhcCCCCCCChhhHHHHhcccc
Q 018348 157 RCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
-|++.||.+||.+..|+..|+++.
T Consensus 424 icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 424 ICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHhcCCCCcCCCcceehhhHHHhc
Confidence 999999999999999999998874
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-20 Score=157.90 Aligned_cols=135 Identities=30% Similarity=0.461 Sum_probs=118.3
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-CCCeEEecCCCccccCCC----C
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-~~~~kl~dfg~~~~~~~~----~ 76 (357)
+|++|.+++... ...+++..+..++.+++.++.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... .
T Consensus 74 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~ 151 (215)
T cd00180 74 EGGSLKDLLKEN-EGKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLK 151 (215)
T ss_pred CCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhh
Confidence 578999998532 247899999999999999999999999 999999999999998 899999999988766543 2
Q ss_pred CccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...++..|++||.+... ..+.++|+|++|+++++| ..+.+++
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l 194 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLI 194 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHH
Confidence 34567889999999876 778899999999999998 4688999
Q ss_pred HHhhhcCCCCCCChhhHHHH
Q 018348 156 SRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~~ 175 (357)
..|++.+|++||++.+++..
T Consensus 195 ~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 195 RKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHhhCCcccCcCHHHHhhC
Confidence 99999999999999998764
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-20 Score=147.72 Aligned_cols=168 Identities=19% Similarity=0.317 Sum_probs=123.5
Q ss_pred cHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----CccC
Q 018348 5 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYST 80 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----~~~g 80 (357)
+|..|.. .-++.++.+.+..++.|+++||.|+|+.+ ++|||+||.|.+|+.+|..|++|||+++-++... ..+-
T Consensus 86 dlkkyfd-slng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcysaevv 163 (292)
T KOG0662|consen 86 DLKKYFD-SLNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV 163 (292)
T ss_pred HHHHHHH-hcCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceee
Confidence 4555553 24678999999999999999999999999 9999999999999999999999999999876543 2345
Q ss_pred CCCCCchhhhcCCC-CCCcccchhHHHHHHHHHc-CCCCCCcchh-HHhh----------hcc---ccccccccccCCCC
Q 018348 81 NLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLS-GKHIPPSHAL-DLIR----------DRN---LQMLTDSCLEGQFT 144 (357)
Q Consensus 81 t~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~-g~~~~~~~~~-~~~~----------~~~---~~~~~~~~~~~~~~ 144 (357)
|.+|.+|.++.+.+ ++...|+||-||++.|+.. |++.|++... +..+ +.. +..+.+-..-+.+|
T Consensus 164 tlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~yp 243 (292)
T KOG0662|consen 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYP 243 (292)
T ss_pred eeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCcc
Confidence 89999999999865 7889999999999999986 5545554311 1111 000 11111111111111
Q ss_pred ---------chhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 145 ---------DDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 145 ---------~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+.....-.+++++.+..+|.+|.+++..++
T Consensus 244 attswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 244 ATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred ccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 122334678999999999999999988775
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-20 Score=153.53 Aligned_cols=165 Identities=22% Similarity=0.254 Sum_probs=121.5
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC-C-CCCeEEecCCCccccCCCCCc-
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-E-DGNPRLSTFGLMKNSRDGKSY- 78 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~-~-~~~~kl~dfg~~~~~~~~~~~- 78 (357)
|.|+|.+.+ ....+.+.-..+|+.|++.||.|||+++ +||||||.+||||- . .-++||||||..+..+.....
T Consensus 105 P~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~ 180 (378)
T KOG1345|consen 105 PRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYL 180 (378)
T ss_pred ccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceehhh
Confidence 779999888 4567888889999999999999999999 99999999999993 3 347999999997765444322
Q ss_pred cCCCCCCchhhhcC---C--CCCCcccchhHHHHHHHHHcCCCCCCcc--------hhHHhhhccccccccccccCCCCc
Q 018348 79 STNLAFTPPEYLRT---G--RVTPESVIYSFGTLLLDLLSGKHIPPSH--------ALDLIRDRNLQMLTDSCLEGQFTD 145 (357)
Q Consensus 79 ~gt~~y~aPE~~~~---~--~~~~~~Di~slG~vl~el~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
-.+..|.+||.... + ...+.+|+|.||++++..+||..|+... ....+..+....+++ . -.
T Consensus 181 ~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~-----~-F~ 254 (378)
T KOG1345|consen 181 EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK-----K-FN 254 (378)
T ss_pred hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch-----h-hc
Confidence 23677999997653 2 3577899999999999999999876421 112222222221111 1 11
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHh
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTAL 176 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L 176 (357)
..++.+..+.++-+..++++|--+.++..+-
T Consensus 255 ~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 255 PFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred ccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 2346788899999999999997666665544
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-20 Score=170.26 Aligned_cols=116 Identities=21% Similarity=0.256 Sum_probs=97.9
Q ss_pred cHHhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC-CCeEEecCCCccccCCCC--CccC
Q 018348 5 TLAKHLFHW-ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDGK--SYST 80 (357)
Q Consensus 5 sL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~-~~~kl~dfg~~~~~~~~~--~~~g 80 (357)
+|.+.|... .+-.|....+-.++.|+.-||..|..-+ |+|.||||.|||++.. ..+||||||.+....... .+.-
T Consensus 519 NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLV 597 (752)
T KOG0670|consen 519 NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLV 597 (752)
T ss_pred hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCccccccccccccHHHH
Confidence 566777432 2456777888999999999999999999 9999999999999855 569999999987765543 2345
Q ss_pred CCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcc
Q 018348 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 121 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~ 121 (357)
+..|.|||.+.+-+|+..-|+||.||+||||.||+..|++.
T Consensus 598 SRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 598 SRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred HHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 77899999999999999999999999999999999888763
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-19 Score=166.69 Aligned_cols=168 Identities=18% Similarity=0.198 Sum_probs=128.8
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC----CCCC
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKS 77 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~----~~~~ 77 (357)
-||||+|.-+ -.+++++.++..+.+..++||+|||+++ -+|||||-.||++++.|.+|++|||++-.+. ..++
T Consensus 95 gggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks 171 (829)
T KOG0576|consen 95 GGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS 171 (829)
T ss_pred CCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence 3788888664 4689999999999999999999999999 8999999999999999999999999876543 4467
Q ss_pred ccCCCCCCchhhh---cCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-ccccccccccCCCCchhHHHHHH
Q 018348 78 YSTNLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-LQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 78 ~~gt~~y~aPE~~---~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
+.||+.||+||+. +.+.+...+|||++|+...|+-.-++|. ++....-.-.. .....++ ....-+....+.+.+
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqppl-fdlhpmr~l~LmTkS~~qp-p~lkDk~kws~~fh~ 249 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPL-FDLHPMRALFLMTKSGFQP-PTLKDKTKWSEFFHN 249 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcc-cccchHHHHHHhhccCCCC-CcccCCccchHHHHH
Confidence 8999999999976 3467899999999999999987666442 22111111111 1111111 111223456688999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
+++.|+..+|.+||+++.++.
T Consensus 250 fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 250 FVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHhcCCCccCCChhhhee
Confidence 999999999999999987654
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.2e-20 Score=166.46 Aligned_cols=115 Identities=15% Similarity=0.243 Sum_probs=103.4
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CCcc
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 79 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~~~ 79 (357)
+|.+|.++|. -...+++.+...|++||+-|+++||+.+ |||||||-+||.++.+|.+||+|||.+.....+ ..++
T Consensus 653 ~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~ 729 (772)
T KOG1152|consen 653 EGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFV 729 (772)
T ss_pred CCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEEeeccchhhhcCCCcceee
Confidence 4678999995 4568999999999999999999999999 999999999999999999999999988665544 5789
Q ss_pred CCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCC
Q 018348 80 TNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPP 119 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~ 119 (357)
||..|.|||++.+.+| +..-|||++|+++|.++....|++
T Consensus 730 gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 730 GTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999999999876 667999999999999999888775
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.1e-19 Score=143.10 Aligned_cols=157 Identities=22% Similarity=0.291 Sum_probs=114.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC-CCeEEecCCCccccCCCCCc---cCCCCCCchhhhcC
Q 018348 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDGKSY---STNLAFTPPEYLRT 92 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~-~~~kl~dfg~~~~~~~~~~~---~gt~~y~aPE~~~~ 92 (357)
.++--.+..++.+++.||.|+|+.| |+|||+||+|++||.. -.++|+|.|++.+..++... +.+..|--||++-.
T Consensus 128 tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVd 206 (338)
T KOG0668|consen 128 TLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206 (338)
T ss_pred hhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheee
Confidence 4555567788999999999999999 9999999999999954 56999999999988777543 45677889999876
Q ss_pred -CCCCCcccchhHHHHHHHHHcCCCCCCcc-h-------------hHHhhhc--cccccccccc----------------
Q 018348 93 -GRVTPESVIYSFGTLLLDLLSGKHIPPSH-A-------------LDLIRDR--NLQMLTDSCL---------------- 139 (357)
Q Consensus 93 -~~~~~~~Di~slG~vl~el~~g~~~~~~~-~-------------~~~~~~~--~~~~~~~~~~---------------- 139 (357)
..++..-|+|||||++..|+..+.||.-. . ...+... ....-.++..
T Consensus 207 y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi 286 (338)
T KOG0668|consen 207 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFI 286 (338)
T ss_pred chhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhC
Confidence 45888999999999999999998886421 0 0000000 0000011110
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...-..-..++..+++.+.|..|-.+|+|+.|++.
T Consensus 287 ~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 287 NSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred CccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 00111112467899999999999999999999875
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-19 Score=162.62 Aligned_cols=158 Identities=26% Similarity=0.410 Sum_probs=116.3
Q ss_pred CccHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-----
Q 018348 3 NETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 76 (357)
Q Consensus 3 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----- 76 (357)
-++|++||.++. ....++...+.++.|+..|+.| ++ .+|+|+||.||+...+..+||+|||+........
T Consensus 340 ~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~ 415 (516)
T KOG1033|consen 340 KETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPA 415 (516)
T ss_pred hhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheeecccCCcccch
Confidence 468999997543 3467888899999999999999 77 9999999999999999999999999876554332
Q ss_pred -----CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 77 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 -----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...||..||+||.+.+..++.++|||+||++++||+.- |.... ........+.+..+++....+. +.=
T Consensus 416 ~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~---f~T~~---er~~t~~d~r~g~ip~~~~~d~-p~e 488 (516)
T KOG1033|consen 416 AASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQ---FSTQF---ERIATLTDIRDGIIPPEFLQDY-PEE 488 (516)
T ss_pred hhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHH---hccHH---HHHHhhhhhhcCCCChHHhhcC-cHH
Confidence 34689999999999999999999999999999999972 11110 0111111111211211111111 233
Q ss_pred HHHHHHhhhcCCCCCCChhh
Q 018348 152 VRLASRCLQYEPRERPNPKS 171 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~ 171 (357)
..++++++...|.+||++.+
T Consensus 489 ~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 489 YTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred HHHHHHhcCCCcccCchHHH
Confidence 57999999999999995544
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.8e-18 Score=146.43 Aligned_cols=117 Identities=25% Similarity=0.278 Sum_probs=101.2
Q ss_pred CCCccHHhhhccCCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----
Q 018348 1 MPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---- 75 (357)
+++++|.+++.. ... +++..+..++.+++.++.+||..+ ++|+||+|.||+++.++.++|+|||.+......
T Consensus 79 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 79 CEGGDLFDYLRK--KGGKLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred cCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 357799999963 223 899999999999999999999998 999999999999999999999999988776544
Q ss_pred -CCccCCCCCCchhhh-cCCCCCCcccchhHHHHHHHHHcCCCCCCc
Q 018348 76 -KSYSTNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLSGKHIPPS 120 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~vl~el~~g~~~~~~ 120 (357)
....++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 234567889999998 555678899999999999999999988855
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.4e-18 Score=155.30 Aligned_cols=180 Identities=21% Similarity=0.283 Sum_probs=133.0
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC------C
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------G 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~------~ 75 (357)
..|||.|.|.. ....+++.....++++++.||.|+|...-..|+.++++|++++..+.+|++|||+...... .
T Consensus 30 ~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~ 108 (484)
T KOG1023|consen 30 SRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAH 108 (484)
T ss_pred cCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhccccccccccccc
Confidence 57999999964 4678999999999999999999999987239999999999999999999999998765532 1
Q ss_pred CCccCCCCCCchhhhcCC-------CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccc---ccccccCCCC-
Q 018348 76 KSYSTNLAFTPPEYLRTG-------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---TDSCLEGQFT- 144 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~-------~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~- 144 (357)
........|.|||.++.. ..+.+.||||||++++|+++.+.||...............+ ....+++...
T Consensus 109 ~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~ 188 (484)
T KOG1023|consen 109 HPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIEL 188 (484)
T ss_pred chhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhh
Confidence 112234679999999873 14678999999999999999998886522111100111111 1111111111
Q ss_pred c-hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 145 D-DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 145 ~-~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
. ...+.+..++.+||..+|.+||++..|...++.+...
T Consensus 189 ~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 189 LNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred hhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 1 3445799999999999999999999999988777543
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-18 Score=167.72 Aligned_cols=169 Identities=16% Similarity=0.140 Sum_probs=127.9
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC------
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------ 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------ 75 (357)
|+ +|...+. ..+.++...+--++.|++.|+.|+|+.| +.|||+|++|+++..+|.+||+|||.+..+...
T Consensus 404 ~~-Dlf~~~~--~~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~ 479 (601)
T KOG0590|consen 404 PY-DLFSLVM--SNGKLTPLEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIH 479 (601)
T ss_pred cH-HHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcchhhh
Confidence 45 7788785 3357888889999999999999999999 999999999999999999999999987655422
Q ss_pred --CCccCCCCCCchhhhcCCCCCC-cccchhHHHHHHHHHcCCCCCCcchhHHh---hhccccccccccccCCCCchhHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTP-ESVIYSFGTLLLDLLSGKHIPPSHALDLI---RDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~-~~Di~slG~vl~el~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
...+|+-.|+|||++.+..+.+ ..||||.|+++..|++|+.|+.......- ............-........+.
T Consensus 480 ~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ 559 (601)
T KOG0590|consen 480 ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPR 559 (601)
T ss_pred hhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchh
Confidence 2346889999999999888766 69999999999999999877543211100 00000000011111122334567
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..+.+|.+||+.+|.+|.++.+|++
T Consensus 560 ~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 560 ETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred hHHHHHHHHccCChhheecHHHHhh
Confidence 8899999999999999999999876
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.9e-17 Score=129.49 Aligned_cols=105 Identities=15% Similarity=0.111 Sum_probs=100.8
Q ss_pred HHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 018348 250 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 329 (357)
Q Consensus 250 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 329 (357)
.+...|..++..|+|++|+..|++++.++|. +..+|.++|.++..+|++++|+..|.++++++|+++.+++++|.++..
T Consensus 26 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~ 104 (144)
T PRK15359 26 TVYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKM 104 (144)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 3667899999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHhhccccccccccC
Q 018348 330 MGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 330 ~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+|++++|+.+|++|++++|++..+|.
T Consensus 105 ~g~~~eAi~~~~~Al~~~p~~~~~~~ 130 (144)
T PRK15359 105 MGEPGLAREAFQTAIKMSYADASWSE 130 (144)
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 99999999999999999999987663
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.4e-17 Score=147.89 Aligned_cols=180 Identities=16% Similarity=0.145 Sum_probs=132.8
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC-----CCeEEecCCCcc--ccC-
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-----GNPRLSTFGLMK--NSR- 73 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~-----~~~kl~dfg~~~--~~~- 73 (357)
-|.||.++......+.++..+++.|+.|++.+|++||+.| ++||||||.|++++.. ..+.+.|||+++ .+.
T Consensus 103 ~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~ 181 (322)
T KOG1164|consen 103 LGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVG 181 (322)
T ss_pred cCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccC
Confidence 4678999775444578999999999999999999999999 9999999999999854 358999999998 311
Q ss_pred --------C---CCCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCC
Q 018348 74 --------D---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 74 --------~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
. ...+.||..|+++.++.+...+++.|+||++.++.+++.|..|+................... ....
T Consensus 182 ~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~-~~~~ 260 (322)
T KOG1164|consen 182 DSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKL-LTDR 260 (322)
T ss_pred CCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhh-cccc
Confidence 1 112458999999999999999999999999999999999987764432111111110000000 0000
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
.....+..+..+...+-..+...+|.+..+...|.......
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 261 FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 22223466777777777799999999999999887665543
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.5e-18 Score=146.17 Aligned_cols=138 Identities=21% Similarity=0.265 Sum_probs=96.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC-ccCCCCCCchhhhcCC---
Q 018348 18 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAFTPPEYLRTG--- 93 (357)
Q Consensus 18 l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~-~~gt~~y~aPE~~~~~--- 93 (357)
+...-++.+..|+++.+++||..+ ++|+||+|+|++++.+|.++|+||+.....+.... ...+..|.+||.....
T Consensus 142 l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~ 220 (288)
T PF14531_consen 142 LAFAARLSLTVQMIRLVANLHSYG-LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQF 220 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSC
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcc-eEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhccc
Confidence 444456677899999999999999 99999999999999999999999987765544322 3345789999977442
Q ss_pred -----CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCC
Q 018348 94 -----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 166 (357)
Q Consensus 94 -----~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 166 (357)
.++.+.|.|+||+++|.|++|..|+............ -..+. +.++.++.||..+|+.||.+|
T Consensus 221 ~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~~---------f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 221 GQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEWD---------FSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGGG---------GTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccccc---------chhcC-CcCHHHHHHHHHHccCCcccC
Confidence 4688999999999999999999888654332221111 11233 566899999999999999987
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.2e-17 Score=144.72 Aligned_cols=53 Identities=13% Similarity=0.175 Sum_probs=48.4
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 55 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill 55 (357)
|.+|-.+|....-+.++...+..|+.||+.||.|||.++.|||-||||+|||+
T Consensus 169 GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 169 GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL 221 (590)
T ss_pred hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence 56788888766678899999999999999999999999889999999999998
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.8e-17 Score=147.11 Aligned_cols=107 Identities=27% Similarity=0.408 Sum_probs=103.0
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
+.++..+.+|+.+|+.|+|..|+..|++||..+|+ ++.+|.|||.||.++|.+..|++|++.+++++|++.++|++.|.
T Consensus 356 e~A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~ 434 (539)
T KOG0548|consen 356 EKAEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGA 434 (539)
T ss_pred hHHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 44778888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
++..+.+|++|.++|++|+++||++.++
T Consensus 435 al~~mk~ydkAleay~eale~dp~~~e~ 462 (539)
T KOG0548|consen 435 ALRAMKEYDKALEAYQEALELDPSNAEA 462 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhHHH
Confidence 9999999999999999999999998764
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.5e-17 Score=144.79 Aligned_cols=157 Identities=24% Similarity=0.292 Sum_probs=112.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-CCCeEEecCCCcccc-----------------CC--CC
Q 018348 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNS-----------------RD--GK 76 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-~~~~kl~dfg~~~~~-----------------~~--~~ 76 (357)
.++...+..+++.++.||.++|.+| ||||||||+|++.+. .+.-.|.|||++... .+ +.
T Consensus 128 ~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~ 206 (418)
T KOG1167|consen 128 SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGK 206 (418)
T ss_pred cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccC
Confidence 4678889999999999999999999 999999999999984 467789999997610 00 00
Q ss_pred -----------------------------CccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcch----
Q 018348 77 -----------------------------SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHA---- 122 (357)
Q Consensus 77 -----------------------------~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~---- 122 (357)
...||++|.|||++.. ...+.+.||||.||+++.++++..||....
T Consensus 207 ~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~ 286 (418)
T KOG1167|consen 207 DVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDAD 286 (418)
T ss_pred cccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccc
Confidence 0137899999999876 457899999999999999999998863210
Q ss_pred --------------------hHH---hhhcc----------cccc-cccccc--------CCCCchhHHHHHHHHHHhhh
Q 018348 123 --------------------LDL---IRDRN----------LQML-TDSCLE--------GQFTDDDGTELVRLASRCLQ 160 (357)
Q Consensus 123 --------------------~~~---~~~~~----------~~~~-~~~~~~--------~~~~~~~~~~l~~li~~cl~ 160 (357)
... +...+ ...+ ...+.. .......+..+.+++.+|++
T Consensus 287 al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le 366 (418)
T KOG1167|consen 287 ALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLE 366 (418)
T ss_pred hHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHcc
Confidence 000 00000 0111 011111 11112234578899999999
Q ss_pred cCCCCCCChhhHHH
Q 018348 161 YEPRERPNPKSLVT 174 (357)
Q Consensus 161 ~~p~~Rps~~~i~~ 174 (357)
.||.+|.|+++++.
T Consensus 367 ~np~kRitAEeALk 380 (418)
T KOG1167|consen 367 LNPQKRITAEDALK 380 (418)
T ss_pred CChhhcccHHHHhc
Confidence 99999999999875
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.9e-16 Score=138.21 Aligned_cols=165 Identities=19% Similarity=0.218 Sum_probs=121.5
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee--CCCC--CeEEecCCCccccC------
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DEDG--NPRLSTFGLMKNSR------ 73 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill--~~~~--~~kl~dfg~~~~~~------ 73 (357)
-||.+||. ....+.....-|+.|+++|+.|||.++ |.|||+|++|||+ ++|+ .++|+|||-+--..
T Consensus 327 ~tLr~yl~---~~~~s~r~~~~~laQlLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlql 402 (598)
T KOG4158|consen 327 QTLREYLW---TRHRSYRTGRVILAQLLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQL 402 (598)
T ss_pred hhHHHHHh---cCCCchHHHHHHHHHHHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeecccccccc
Confidence 37888884 456788888999999999999999999 9999999999998 4454 47789999543211
Q ss_pred ----CCCCccCCCCCCchhhhcCC--C----CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCC
Q 018348 74 ----DGKSYSTNLAFTPPEYLRTG--R----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143 (357)
Q Consensus 74 ----~~~~~~gt~~y~aPE~~~~~--~----~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
......|.-.-||||+.... + ...|+|.|+.|.+.||+++...||+......+.....+. .. -+..
T Consensus 403 py~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe---~q-LPal 478 (598)
T KOG4158|consen 403 PYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE---SQ-LPAL 478 (598)
T ss_pred ccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh---hh-CCCC
Confidence 11233467778999998652 2 244899999999999999999999874322222222222 11 2245
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHh
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L 176 (357)
|..+++.+++++...|+.||++|+|..-....|
T Consensus 479 p~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 479 PSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred cccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 666778999999999999999999876554443
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-16 Score=143.84 Aligned_cols=105 Identities=28% Similarity=0.394 Sum_probs=101.5
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
+..++++|++++..|+|+.|+..|++||.++|. +-..|.||+.+|..+|+|++|+++..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 467889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHhhccccccccc
Q 018348 328 SAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 328 ~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
..+|+|++|+..|.++|+.||+|...
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~~L 106 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNKQL 106 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchHHH
Confidence 99999999999999999999998754
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.5e-16 Score=142.44 Aligned_cols=105 Identities=24% Similarity=0.268 Sum_probs=100.9
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
+..+..+|..++..|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|.++
T Consensus 2 ~~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~ 80 (356)
T PLN03088 2 AKDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTAC 80 (356)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence 346788999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHhhccccccccc
Q 018348 328 SAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 328 ~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
+.+|+|++|+.+|++|++++|++..+
T Consensus 81 ~~lg~~~eA~~~~~~al~l~P~~~~~ 106 (356)
T PLN03088 81 MKLEEYQTAKAALEKGASLAPGDSRF 106 (356)
T ss_pred HHhCCHHHHHHHHHHHHHhCCCCHHH
Confidence 99999999999999999999998754
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.4e-16 Score=124.03 Aligned_cols=112 Identities=19% Similarity=0.245 Sum_probs=104.6
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc----hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 318 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~ 318 (357)
.....+..++..|+.+|..|+|++|...|..||++-|... ..+|.|+|.|++++++++.|+.++.+||+++|.+-+
T Consensus 90 k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~k 169 (271)
T KOG4234|consen 90 KAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEK 169 (271)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHH
Confidence 4467889999999999999999999999999999999831 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 319 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 319 a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
|..+++.+|.++.+|++|+.+|++.+++||.+..|.
T Consensus 170 Al~RRAeayek~ek~eealeDyKki~E~dPs~~ear 205 (271)
T KOG4234|consen 170 ALERRAEAYEKMEKYEEALEDYKKILESDPSRREAR 205 (271)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchHHHH
Confidence 999999999999999999999999999999987664
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.8e-16 Score=136.60 Aligned_cols=108 Identities=23% Similarity=0.317 Sum_probs=103.2
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
-...+..++++|+.||++|.|++||.+|.++|..+|. ++.++.|||.+|+++++|..|..+|..|+.+|-.+.+||.++
T Consensus 93 LL~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR 171 (536)
T KOG4648|consen 93 LLKKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRR 171 (536)
T ss_pred HHHhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHH
Confidence 3566677999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 324 AAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
|.+...+|+.+||.++++.+|+|+|++.+
T Consensus 172 ~~AR~~Lg~~~EAKkD~E~vL~LEP~~~E 200 (536)
T KOG4648|consen 172 MQARESLGNNMEAKKDCETVLALEPKNIE 200 (536)
T ss_pred HHHHHHHhhHHHHHHhHHHHHhhCcccHH
Confidence 99999999999999999999999999754
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.1e-15 Score=118.21 Aligned_cols=102 Identities=16% Similarity=-0.014 Sum_probs=99.2
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
.+..+.++..|..++..|++++|+..|+-++.++|. +...|+++|.|+..+|++.+|+..|.+|+.++|+++.++++.|
T Consensus 32 ~~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag 110 (157)
T PRK15363 32 TQPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAA 110 (157)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 467889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLE 347 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~ 347 (357)
.|+..+|+.++|+++|+.|+.+-
T Consensus 111 ~c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 111 ECYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999876
|
|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.5e-16 Score=135.77 Aligned_cols=112 Identities=19% Similarity=0.256 Sum_probs=102.5
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc--------------chHHHhhHHHHHHhcCChHHHHHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------------SPTVYARRSLCYLMSDMPQDALNDAMQ 308 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~~~ 308 (357)
+++..+...+..|+.+|+.|+|..|+..|++|+..-... --.+++|+|.||+++++|.+|+..+.+
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 588999999999999999999999999999998753320 125799999999999999999999999
Q ss_pred HHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 309 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 309 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|.++|+|.+|.|++|.++..+|+|+.|+.+|++|++++|.|..+.
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nka~~ 328 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNKAAR 328 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999999999999999999999999999997654
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.5e-16 Score=150.99 Aligned_cols=166 Identities=20% Similarity=0.272 Sum_probs=116.3
Q ss_pred cHHhhhccCCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC-CCC------
Q 018348 5 TLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-DGK------ 76 (357)
Q Consensus 5 sL~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~-~~~------ 76 (357)
+|+|+| ..+| +..-+..=|+.|++.||.-+|..+ |+|||||.+||||..-..+.|+||...+-.- +..
T Consensus 106 nLyDRl---STRPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~ 181 (1431)
T KOG1240|consen 106 NLYDRL---STRPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFT 181 (1431)
T ss_pred hhhhhh---ccchHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCcccce
Confidence 577777 2344 466677779999999999999999 9999999999999988889999998654311 111
Q ss_pred ----CccCCCCCCchhhhcC----------CC-CCCcccchhHHHHHHHHHcCC-CCCCcchhHHhhhcccccccccccc
Q 018348 77 ----SYSTNLAFTPPEYLRT----------GR-VTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLE 140 (357)
Q Consensus 77 ----~~~gt~~y~aPE~~~~----------~~-~~~~~Di~slG~vl~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (357)
+......|.|||.+-. .+ .+++.||||+|||+.||++-. ++|.-...-..+.+. ...... .-
T Consensus 182 fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~e~-~L 259 (1431)
T KOG1240|consen 182 FFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDPEQ-LL 259 (1431)
T ss_pred EEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCHHH-HH
Confidence 1122357999997743 12 678999999999999998764 444333222233322 111111 11
Q ss_pred CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 141 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
...+. ..++.++..|++.||++|.|+++.++.-.++
T Consensus 260 e~Ied---~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 260 EKIED---VSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred HhCcC---ccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 12222 4689999999999999999999988874433
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.8e-15 Score=130.25 Aligned_cols=171 Identities=15% Similarity=0.167 Sum_probs=129.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-----CeEEecCCCccccCCC--
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-----NPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-----~~kl~dfg~~~~~~~~-- 75 (357)
|-||+|+. +..++.++..++..|+.|++.-++|+|++. +|.|||||+|+||...+ .+.++|||+++.+.+.
T Consensus 107 GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 107 GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 56888877 567899999999999999999999999999 99999999999997544 4889999999986544
Q ss_pred ---------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcch-------hHHhhhccccccccccc
Q 018348 76 ---------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-------LDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 76 ---------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~ 139 (357)
++..||..||+--.+.+...+.+.|+=|||.|+.+.+.|..|+.+.. .+.+++......+. .+
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~-~L 263 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIE-VL 263 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHH-HH
Confidence 24569999999999888889999999999999999999998876532 22222222221111 12
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
... .+.++...+.-.-..+-.+-|.+.-+...+..+.
T Consensus 264 c~g----~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvl 300 (449)
T KOG1165|consen 264 CEG----FPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVL 300 (449)
T ss_pred Hhc----CHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 222 3355666666555667778888877666554443
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.9e-15 Score=134.66 Aligned_cols=173 Identities=24% Similarity=0.298 Sum_probs=126.6
Q ss_pred CCCccHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-CeEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-~~kl~dfg~~~~~~~~--- 75 (357)
+.+++|.+++..... ..++......++.|++.++.|+|..+ ++|||+||.||+++..+ .++++|||++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 357788866642111 27899999999999999999999999 99999999999999888 6999999988754332
Q ss_pred -------CCccCCCCCCchhhhcC---CCCCCcccchhHHHHHHHHHcCCCCCCcchh----HHhhhccccccccccccC
Q 018348 76 -------KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTDSCLEG 141 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 141 (357)
....||..|++||.+.+ ...+...|+||+|++++++++|..|+..... .......... ..+....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 237 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL-PTPSLAS 237 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhc-CCccccc
Confidence 34568999999999987 4688899999999999999999988544331 1111111111 1000111
Q ss_pred CCCc----hhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 142 QFTD----DDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 142 ~~~~----~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
.... .....+.+++..|+..+|..|.+.......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1111 112578899999999999999888776553
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.1e-15 Score=134.31 Aligned_cols=99 Identities=26% Similarity=0.371 Sum_probs=94.9
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
++..-+.+++.+|+.+|++|+|++||.+|++||++.|+ .+..|.||+.||..+|++++.++++.+|++++|++++|+++
T Consensus 110 ~~~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~R 188 (606)
T KOG0547|consen 110 ERLKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLR 188 (606)
T ss_pred HHHHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHH
Confidence 45678899999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHH
Q 018348 323 QAAALSAMGMENEAQVALKE 342 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~ 342 (357)
++.++..+|++++|+.+..-
T Consensus 189 RA~A~E~lg~~~eal~D~tv 208 (606)
T KOG0547|consen 189 RASAHEQLGKFDEALFDVTV 208 (606)
T ss_pred HHHHHHhhccHHHHHHhhhH
Confidence 99999999999999988753
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-14 Score=130.35 Aligned_cols=105 Identities=12% Similarity=-0.035 Sum_probs=101.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..++.+|..+...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|+..|+++++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44677999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
+++.+|++++|+++|+++++++|++.
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999885
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-15 Score=141.93 Aligned_cols=152 Identities=20% Similarity=0.250 Sum_probs=122.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccCCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 82 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~gt~ 82 (357)
||.|...+. +...+.+.....+...++-+++++|+.+ ++|||+|++||+++.+|.+++.|||+.+..-..+..+||.
T Consensus 81 gg~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~ 157 (612)
T KOG0603|consen 81 GGDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTY 157 (612)
T ss_pred cchhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccch
Confidence 445555443 3456777888889999999999999999 9999999999999999999999999999877776669999
Q ss_pred CCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcC
Q 018348 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 162 (357)
Q Consensus 83 ~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 162 (357)
.||+||.+. .....+|.||||++.++|++|..||..+... .+.. .....|........+++..++..+
T Consensus 158 eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~--------~Il~--~~~~~p~~l~~~a~~~~~~l~~r~ 225 (612)
T KOG0603|consen 158 EYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMK--------RILK--AELEMPRELSAEARSLFRQLFKRN 225 (612)
T ss_pred hhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHH--------HHhh--hccCCchhhhHHHHHHHHHHHhhC
Confidence 999999998 5677899999999999999999888762221 1111 122345566678889999999999
Q ss_pred CCCCCCh
Q 018348 163 PRERPNP 169 (357)
Q Consensus 163 p~~Rps~ 169 (357)
|..|-..
T Consensus 226 p~nrLg~ 232 (612)
T KOG0603|consen 226 PENRLGA 232 (612)
T ss_pred HHHHhcc
Confidence 9999544
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.2e-14 Score=113.24 Aligned_cols=107 Identities=13% Similarity=0.123 Sum_probs=102.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+......|..++..|++++|+..|++++..+|. ++.++.++|.++..+|++++|+..++++++++|.++..++.+|.
T Consensus 15 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~ 93 (135)
T TIGR02552 15 EQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAE 93 (135)
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 45567889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
++..+|++++|+..|+++++++|++...
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~p~~~~~ 121 (135)
T TIGR02552 94 CLLALGEPESALKALDLAIEICGENPEY 121 (135)
T ss_pred HHHHcCCHHHHHHHHHHHHHhccccchH
Confidence 9999999999999999999999998764
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.6e-14 Score=118.39 Aligned_cols=109 Identities=13% Similarity=0.046 Sum_probs=101.8
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHH-HhcCC--hHHHHHHHHHHHHhCCCchHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY-LMSDM--PQDALNDAMQAQIISPIWHIA 319 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~-~~~~~--~~~A~~~~~~al~l~p~~~~a 319 (357)
...++++.|...|..+...|++++|+..|++|++++|+ ++.++.++|.++ ...|+ +++|.+.++++++++|+++.+
T Consensus 68 ~~P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~a 146 (198)
T PRK10370 68 ANPQNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTA 146 (198)
T ss_pred HCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhH
Confidence 44577889999999999999999999999999999999 999999999975 67787 599999999999999999999
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 320 SYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 320 ~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
++.+|.+++++|+|++|+.+|+++++++|.+.+
T Consensus 147 l~~LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~~ 179 (198)
T PRK10370 147 LMLLASDAFMQADYAQAIELWQKVLDLNSPRVN 179 (198)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 999999999999999999999999999998764
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.7e-14 Score=130.84 Aligned_cols=110 Identities=16% Similarity=0.111 Sum_probs=99.0
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
..-+.+..+.|..+-++|++++|+.+|.+||++.|. .+.++.|+|..|-.+|+.+.|+.+|.+||+++|.+++|+.++|
T Consensus 385 p~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLa 463 (966)
T KOG4626|consen 385 PEFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNLA 463 (966)
T ss_pred hhhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhHH
Confidence 366777888899999999999999999999999999 8899999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
.+|...|+..+|+..|+.||+|+|+.++|..
T Consensus 464 si~kDsGni~~AI~sY~~aLklkPDfpdA~c 494 (966)
T KOG4626|consen 464 SIYKDSGNIPEAIQSYRTALKLKPDFPDAYC 494 (966)
T ss_pred HHhhccCCcHHHHHHHHHHHccCCCCchhhh
Confidence 9999999999999999999999999887754
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.8e-15 Score=144.73 Aligned_cols=133 Identities=20% Similarity=0.203 Sum_probs=107.8
Q ss_pred HHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC-------------------CCCccCCCCCCchhhhc
Q 018348 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-------------------GKSYSTNLAFTPPEYLR 91 (357)
Q Consensus 31 ~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~-------------------~~~~~gt~~y~aPE~~~ 91 (357)
+.+++|||+.+ |+|||+||+|.+|..-|.+|+.|||+.+.... .+..+||+.|.|||++.
T Consensus 153 vla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil 231 (1205)
T KOG0606|consen 153 VLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL 231 (1205)
T ss_pred hHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhh
Confidence 77899999999 99999999999999999999999998664211 12346899999999999
Q ss_pred CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCC
Q 018348 92 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167 (357)
Q Consensus 92 ~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 167 (357)
...|+...|.|++|+++||.+.|..||.+++.+.+-...+...+.-. +-....+++.++++.+.|+.+|..|-
T Consensus 232 rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp---E~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 232 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP---EEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc---ccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 88899999999999999999999999998876665444443322211 11333457899999999999999994
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.6e-15 Score=121.58 Aligned_cols=174 Identities=15% Similarity=0.164 Sum_probs=131.2
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC---CCeEEecCCCccccCCC----
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~---~~~kl~dfg~~~~~~~~---- 75 (357)
|-||++... ...+.++..+++-++-|++.-++|+|.++ +|||||||+|+|..-+ ..+.++|||+++.+.+.
T Consensus 94 GPsLEdLfn-fC~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~ 171 (341)
T KOG1163|consen 94 GPSLEDLFN-FCSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQ 171 (341)
T ss_pred CccHHHHHH-HHhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEeccchhhhccccccc
Confidence 568888774 35788999999999999999999999999 9999999999998633 45889999999876543
Q ss_pred -------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh-------HHhhhccccccccccccC
Q 018348 76 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNLQMLTDSCLEG 141 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 141 (357)
....||..|.+--.+.+...+.+.|+-|+|.|+.+.-.|..|+.+... +.+.+..... ....+..
T Consensus 172 HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~-~ie~LC~ 250 (341)
T KOG1163|consen 172 HIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMST-PIEVLCK 250 (341)
T ss_pred cCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCC-CHHHHhC
Confidence 234688999988888777789999999999999999999988765321 1111111111 1122333
Q ss_pred CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 142 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
.+| .++.-.+.-|-...-++-|....+.+.+.-+....
T Consensus 251 G~P----~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~l 288 (341)
T KOG1163|consen 251 GFP----AEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTL 288 (341)
T ss_pred CCc----HHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhc
Confidence 333 56777888888888889999988887766655443
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.3e-14 Score=117.30 Aligned_cols=133 Identities=17% Similarity=0.117 Sum_probs=118.0
Q ss_pred HHHhcccCcchhhhhhhhhhhhhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc--------CCCc---------ch
Q 018348 221 LEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMV---------SP 283 (357)
Q Consensus 221 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~--------~p~~---------~~ 283 (357)
+.-+....++....+.|.-+..+++..+..+.++||.+|+.|+|.+|+..|..||.. .|.. ..
T Consensus 151 iellqVe~P~qYq~e~WqlsddeKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~t 230 (329)
T KOG0545|consen 151 IELLQVEAPSQYQRETWQLSDDEKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMIT 230 (329)
T ss_pred hhhhhccCchhhccccccCCchHhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhh
Confidence 344456778888888888888999999999999999999999999999999999842 3331 34
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 284 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 284 ~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
.++.|.+.|++..|+|-++++++...+..+|.+.+|||++|.++...-+-++|.++|.++|++||.-...
T Consensus 231 pLllNy~QC~L~~~e~yevleh~seiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldpslasv 300 (329)
T KOG0545|consen 231 PLLLNYCQCLLKKEEYYEVLEHCSEILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPSLASV 300 (329)
T ss_pred HHHHhHHHHHhhHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChhhHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999999986654
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-14 Score=130.57 Aligned_cols=110 Identities=13% Similarity=0.066 Sum_probs=104.4
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+.++++.|+.+..+|.+++|+..|.+|++..|. .+.+++|+|.+|.++|++++|+.+|+.||.++|.++++|.++|
T Consensus 351 p~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda~~NmG 429 (966)
T KOG4626|consen 351 PNHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADALSNMG 429 (966)
T ss_pred CccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHHHHhcc
Confidence 477889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+.|..+|+.++|+.+|++|+.++|...+|.+
T Consensus 430 nt~ke~g~v~~A~q~y~rAI~~nPt~AeAhs 460 (966)
T KOG4626|consen 430 NTYKEMGDVSAAIQCYTRAIQINPTFAEAHS 460 (966)
T ss_pred hHHHHhhhHHHHHHHHHHHHhcCcHHHHHHh
Confidence 9999999999999999999999998877754
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.2e-14 Score=123.75 Aligned_cols=105 Identities=22% Similarity=0.298 Sum_probs=99.7
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc---chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV---SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 321 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 321 (357)
.+..+.++..|+.+|+.|+|..|.++|+.||.++|++ ++.+|.|||.++.++|+..+|+.+++.|++|||.+.+|+.
T Consensus 246 ~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall 325 (486)
T KOG0550|consen 246 PKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALL 325 (486)
T ss_pred HHHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHHH
Confidence 3778889999999999999999999999999999994 4678999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhccccc
Q 018348 322 LQAAALSAMGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 322 ~~g~~~~~~g~~~~A~~~~~~al~l~~~ 349 (357)
++|.|+..+++|++|+++|++|++++..
T Consensus 326 ~ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 326 RRANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999998766
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-13 Score=123.66 Aligned_cols=107 Identities=13% Similarity=0.173 Sum_probs=100.5
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
++.-..-+|..|+-.|+|++|+.+|+.||..+|+ ++.+|+.+|..+....+.++||..|.+|++|.|.+..++|++|++
T Consensus 429 DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgIS 507 (579)
T KOG1125|consen 429 DPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGIS 507 (579)
T ss_pred ChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhhh
Confidence 4455567899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhcccccccccc
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++.+|.|+||++.|-.||.+.++.....
T Consensus 508 ~mNlG~ykEA~~hlL~AL~mq~ks~~~~ 535 (579)
T KOG1125|consen 508 CMNLGAYKEAVKHLLEALSMQRKSRNHN 535 (579)
T ss_pred hhhhhhHHHHHHHHHHHHHhhhcccccc
Confidence 9999999999999999999999865543
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.3e-13 Score=132.49 Aligned_cols=106 Identities=23% Similarity=0.351 Sum_probs=98.4
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
++...+..++++|+.+++.|+|++|+..|+++|++.|+ +..|.|+|.||..+|++++|++++++|++++|++.++|++
T Consensus 122 ~~~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~ 199 (615)
T TIGR00990 122 ERKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNR 199 (615)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 34566888999999999999999999999999999997 5789999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
+|.+|..+|+|++|+.+|..++.+++.+
T Consensus 200 ~a~a~~~lg~~~eA~~~~~~~~~~~~~~ 227 (615)
T TIGR00990 200 RANAYDGLGKYADALLDLTASCIIDGFR 227 (615)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999998887776543
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-13 Score=94.52 Aligned_cols=67 Identities=16% Similarity=0.133 Sum_probs=52.1
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcC-ChHHHHHHHHHhhcccc
Q 018348 282 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMG-MENEAQVALKEGTTLEA 348 (357)
Q Consensus 282 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g-~~~~A~~~~~~al~l~~ 348 (357)
++..|.++|.++...|++++|+.+|+++++++|+++.+|+++|.++..+| ++++|+++|++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 46677777777777777777777777777777777777777777777777 67777777777777776
|
... |
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=107.48 Aligned_cols=95 Identities=15% Similarity=-0.023 Sum_probs=50.3
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 328 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 328 (357)
....++|..|+.+|++..|...+++||+.||+ ++.+|.-+|.+|..+|+.+.|-+.|++|+.++|++.+.++|.|..++
T Consensus 36 ~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~FLC 114 (250)
T COG3063 36 KARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGAFLC 114 (250)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhHHHH
Confidence 33444555555555555555555555555555 45555555555555555555555555555555555555555555555
Q ss_pred HcCChHHHHHHHHHhh
Q 018348 329 AMGMENEAQVALKEGT 344 (357)
Q Consensus 329 ~~g~~~~A~~~~~~al 344 (357)
.+|+|++|...|++|+
T Consensus 115 ~qg~~~eA~q~F~~Al 130 (250)
T COG3063 115 AQGRPEEAMQQFERAL 130 (250)
T ss_pred hCCChHHHHHHHHHHH
Confidence 5555555555555544
|
|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.6e-13 Score=110.83 Aligned_cols=102 Identities=25% Similarity=0.306 Sum_probs=96.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..++.+.++|+.+|..+.|..||.+|.+||.++|. .+.+|.|++.||+++++++.+..++.+|++++|+.++++|.+|.
T Consensus 8 ~~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~ 86 (284)
T KOG4642|consen 8 ESAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQ 86 (284)
T ss_pred hHHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHH
Confidence 35677889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
++.+...|++|+..+.+|..+-.
T Consensus 87 ~~l~s~~~~eaI~~Lqra~sl~r 109 (284)
T KOG4642|consen 87 WLLQSKGYDEAIKVLQRAYSLLR 109 (284)
T ss_pred HHHhhccccHHHHHHHHHHHHHh
Confidence 99999999999999999976543
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.6e-12 Score=98.73 Aligned_cols=105 Identities=15% Similarity=0.122 Sum_probs=97.1
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc---hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc---hHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---HIASY 321 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~ 321 (357)
...++..|..++..|+|++|+..|++++..+|+ + +.+++.+|.++...|++++|+..+++++..+|++ +.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (119)
T TIGR02795 2 EEAYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALL 80 (119)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHH
Confidence 457889999999999999999999999999987 4 5688899999999999999999999999999885 67899
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 322 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 322 ~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
.+|.++..+|++++|+..|+++++..|++..+
T Consensus 81 ~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 112 (119)
T TIGR02795 81 KLGMSLQELGDKEKAKATLQQVIKRYPGSSAA 112 (119)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHCcCChhH
Confidence 99999999999999999999999999988754
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.8e-14 Score=125.98 Aligned_cols=108 Identities=21% Similarity=0.281 Sum_probs=103.8
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
.+..+..+|+.++..++|+.|+..|.+||+++|+ ++.+|.+|+.++++.+.+..|+.|+.+|++++|.+.++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 4667889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhccccccccccC
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
.+.++++.+|+.+|+++..+.|++..+.+
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r 110 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDPDATR 110 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcHHHHH
Confidence 99999999999999999999999987754
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.9e-13 Score=91.95 Aligned_cols=67 Identities=22% Similarity=0.344 Sum_probs=65.0
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcC-ChHHHHHHHHHHHHhCC
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISP 314 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~l~p 314 (357)
.+..|...|..++..|+|++|+..|++||+++|+ ++.+|+++|.+|..+| ++++|+++++++++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 5788999999999999999999999999999999 8999999999999999 79999999999999998
|
... |
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.7e-12 Score=128.23 Aligned_cols=108 Identities=15% Similarity=0.080 Sum_probs=83.2
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..+...|..++..|++++|+..|+++++++|+ ....|.++|.++..+|++++|+.+++++++++|+++.+|+.+|.
T Consensus 329 ~~a~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~ 407 (615)
T TIGR00990 329 KEAIALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQ 407 (615)
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45566777777777788888888888888888777 67777777777777788888888888888888877777887888
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+++.+|++++|+.+|+++++++|++..++
T Consensus 408 ~~~~~g~~~~A~~~~~kal~l~P~~~~~~ 436 (615)
T TIGR00990 408 LHFIKGEFAQAGKDYQKSIDLDPDFIFSH 436 (615)
T ss_pred HHHHcCCHHHHHHHHHHHHHcCccCHHHH
Confidence 88888888888888888887777765443
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.39 E-value=4e-12 Score=92.56 Aligned_cols=99 Identities=20% Similarity=0.249 Sum_probs=94.4
Q ss_pred HHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 018348 250 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 329 (357)
Q Consensus 250 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 329 (357)
.++..|..++..|++++|+..++++++..|. +..++..+|.++...+++++|+..++++++..|.+..+++.+|.++..
T Consensus 2 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (100)
T cd00189 2 ALLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYK 80 (100)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 4678899999999999999999999999999 788999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHhhccccc
Q 018348 330 MGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 330 ~g~~~~A~~~~~~al~l~~~ 349 (357)
+|++++|...++++++++|+
T Consensus 81 ~~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 81 LGKYEEALEAYEKALELDPN 100 (100)
T ss_pred HHhHHHHHHHHHHHHccCCC
Confidence 99999999999999998874
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2e-12 Score=111.89 Aligned_cols=108 Identities=17% Similarity=0.206 Sum_probs=103.3
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
....+++...+.|..++..|++.+|+..|-.||+.+|+ ++.+++.||.+|+.+|+-..|+.++.++|++.|++..|...
T Consensus 33 ~~~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQ 111 (504)
T KOG0624|consen 33 ASPADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQ 111 (504)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHH
Confidence 34467888999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
+|.++.++|++++|..+|+..|.-+|++.
T Consensus 112 Rg~vllK~Gele~A~~DF~~vl~~~~s~~ 140 (504)
T KOG0624|consen 112 RGVVLLKQGELEQAEADFDQVLQHEPSNG 140 (504)
T ss_pred hchhhhhcccHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999765
|
|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.39 E-value=9.7e-13 Score=113.28 Aligned_cols=106 Identities=25% Similarity=0.303 Sum_probs=98.7
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc---CCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA---GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~---~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
+.|+.+++.||.+|+.++|..|+..|+++|.. ||+-++.+|+|||.|.+.+|+|..|++|+.+|+.++|.+.+||++
T Consensus 79 E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~R 158 (390)
T KOG0551|consen 79 EQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYIR 158 (390)
T ss_pred HHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhh
Confidence 47899999999999999999999999999986 455567899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
-+.|++++.++++|+.+.+..+.++.+..
T Consensus 159 ~Akc~~eLe~~~~a~nw~ee~~~~d~e~K 187 (390)
T KOG0551|consen 159 GAKCLLELERFAEAVNWCEEGLQIDDEAK 187 (390)
T ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhHHHH
Confidence 99999999999999999999988876654
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=7e-12 Score=103.20 Aligned_cols=109 Identities=17% Similarity=0.115 Sum_probs=99.4
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc--chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 320 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 320 (357)
.....+..++..|..+...|++++|+..|++++++.|+. ...++.++|.++..+|++++|+..+.++++++|++..++
T Consensus 30 ~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 109 (172)
T PRK02603 30 KKAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSAL 109 (172)
T ss_pred cHhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHH
Confidence 455778889999999999999999999999999987762 246899999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCC--------------hHHHHHHHHHhhccccccc
Q 018348 321 YLQAAALSAMGM--------------ENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 321 ~~~g~~~~~~g~--------------~~~A~~~~~~al~l~~~~~ 351 (357)
..+|.++..+|+ +++|+++++++++++|++.
T Consensus 110 ~~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~~ 154 (172)
T PRK02603 110 NNIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNNY 154 (172)
T ss_pred HHHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchhH
Confidence 999999999998 7889999999999999864
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-11 Score=92.69 Aligned_cols=106 Identities=16% Similarity=0.182 Sum_probs=97.1
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch----H
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH----I 318 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~----~ 318 (357)
..++.+..+..+|..+...|+.+.|++.|.++|.+-|. .+.+|+|++.++..+|+.++|+.++++|+++..... .
T Consensus 38 ~~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacq 116 (175)
T KOG4555|consen 38 QAIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQ 116 (175)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHH
Confidence 34566777888999999999999999999999999999 999999999999999999999999999999987654 4
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHhhccccc
Q 018348 319 ASYLQAAALSAMGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 319 a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 349 (357)
+|..+|.+|..+|+.+.|..+|+.|.++...
T Consensus 117 a~vQRg~lyRl~g~dd~AR~DFe~AA~LGS~ 147 (175)
T KOG4555|consen 117 AFVQRGLLYRLLGNDDAARADFEAAAQLGSK 147 (175)
T ss_pred HHHHHHHHHHHhCchHHHHHhHHHHHHhCCH
Confidence 7999999999999999999999999988654
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-11 Score=111.33 Aligned_cols=113 Identities=9% Similarity=-0.059 Sum_probs=105.1
Q ss_pred hhhHhhHHHHHHHhHHHhcc-CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCCh--HHHHHHHHHHHHhCCCchHH
Q 018348 243 DQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMP--QDALNDAMQAQIISPIWHIA 319 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~-~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~--~~A~~~~~~al~l~p~~~~a 319 (357)
-.......|..+|..+...| ++++|+..++++++.+|+ +..+|.+|+.++.++|+. ++++..++++++++|++..|
T Consensus 66 lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~A 144 (320)
T PLN02789 66 LNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAKNYHA 144 (320)
T ss_pred HCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHHH
Confidence 34467788999999999998 689999999999999999 999999999999999874 78899999999999999999
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHhhccccccccccCC
Q 018348 320 SYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQ 356 (357)
Q Consensus 320 ~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~~ 356 (357)
|..+|.++..+|+|++|++++.++|++||.|.+||..
T Consensus 145 W~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~sAW~~ 181 (320)
T PLN02789 145 WSHRQWVLRTLGGWEDELEYCHQLLEEDVRNNSAWNQ 181 (320)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHCCCchhHHHH
Confidence 9999999999999999999999999999999999864
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6e-12 Score=128.04 Aligned_cols=105 Identities=7% Similarity=-0.138 Sum_probs=101.0
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
.+..+...|..+.+.|++++|+..|+++++++|+ ++.++.++|.++...|++++|+..+++|++++|+++.+++++|.+
T Consensus 608 ~~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~a 686 (987)
T PRK09782 608 SANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYV 686 (987)
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhcccccccc
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
+..+|++++|+.+|++|++++|++..
T Consensus 687 l~~lGd~~eA~~~l~~Al~l~P~~a~ 712 (987)
T PRK09782 687 NQRLDDMAATQHYARLVIDDIDNQAL 712 (987)
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCCch
Confidence 99999999999999999999998754
|
|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.6e-12 Score=93.54 Aligned_cols=83 Identities=20% Similarity=0.294 Sum_probs=74.7
Q ss_pred hccCHHHHHHHHHHHhhcCCCc-chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHH
Q 018348 260 RQKDLKDAIECYTQFIDAGTMV-SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQV 338 (357)
Q Consensus 260 ~~~~~~~Ai~~~~~ai~~~p~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~ 338 (357)
.+|+|+.|+..|+++++.+|.+ +..+++++|.||.++|++++|+..+++ ++.+|.+...++.+|.++.++|+|++|++
T Consensus 1 ~~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~ 79 (84)
T PF12895_consen 1 DQGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIK 79 (84)
T ss_dssp HTT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHH
T ss_pred CCccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 3689999999999999999962 466788899999999999999999999 99999999999999999999999999999
Q ss_pred HHHHh
Q 018348 339 ALKEG 343 (357)
Q Consensus 339 ~~~~a 343 (357)
.|++|
T Consensus 80 ~l~~~ 84 (84)
T PF12895_consen 80 ALEKA 84 (84)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99986
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-12 Score=107.84 Aligned_cols=96 Identities=18% Similarity=0.190 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHhcCCCceecCC-CCCCeeeCCCCCeEEecCCCccccCCCCCc-----------------cCCCCCC
Q 018348 24 LRVVLHLAQALEYCTSKGRALYHDL-NAYRILFDEDGNPRLSTFGLMKNSRDGKSY-----------------STNLAFT 85 (357)
Q Consensus 24 ~~i~~~i~~~l~~lH~~~~~~H~dl-k~~Nill~~~~~~kl~dfg~~~~~~~~~~~-----------------~gt~~y~ 85 (357)
..++.+++.+|.++|..+ |+|||| ||.||+++.+|.++|+|||++......... ..+..|+
T Consensus 94 ~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l 172 (218)
T PRK12274 94 LAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAAL 172 (218)
T ss_pred HHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 457889999999999999 999999 799999999999999999999865443310 1367788
Q ss_pred chhhhcCC-CCC-CcccchhHHHHHHHHHcCCCCCCc
Q 018348 86 PPEYLRTG-RVT-PESVIYSFGTLLLDLLSGKHIPPS 120 (357)
Q Consensus 86 aPE~~~~~-~~~-~~~Di~slG~vl~el~~g~~~~~~ 120 (357)
+|+....- ..+ ...+.++.|.-+|.++|+..+..+
T Consensus 173 ~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 173 TPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred CHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 88765432 333 578899999999999999976544
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.8e-13 Score=123.30 Aligned_cols=106 Identities=14% Similarity=0.094 Sum_probs=93.5
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
...+.|...|+.+--+++++.||.+|.+||.+||+ .+-+|..+|.=+....+++.|..+|..||..+|++..|||.+|.
T Consensus 419 ~sPesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwYGlG~ 497 (638)
T KOG1126|consen 419 NSPESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWYGLGT 497 (638)
T ss_pred CCcHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHHhhhh
Confidence 56788999999999999999999999999999998 67778888888888888888888888888888888888888888
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
+|.++++++.|.-.|++|++++|.+..
T Consensus 498 vy~Kqek~e~Ae~~fqkA~~INP~nsv 524 (638)
T KOG1126|consen 498 VYLKQEKLEFAEFHFQKAVEINPSNSV 524 (638)
T ss_pred heeccchhhHHHHHHHhhhcCCccchh
Confidence 888888888888888888888888763
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.1e-11 Score=99.95 Aligned_cols=108 Identities=16% Similarity=0.080 Sum_probs=94.2
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc--chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 321 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 321 (357)
....+..+...|..+...|+|++|+..|++|+.+.++. .+.++.++|.+|...|++++|+..+++|+.++|.+..++.
T Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~ 110 (168)
T CHL00033 31 GEKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALN 110 (168)
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 34578889999999999999999999999999987652 2358999999999999999999999999999999999999
Q ss_pred HHHHHHH-------HcCChH-------HHHHHHHHhhccccccc
Q 018348 322 LQAAALS-------AMGMEN-------EAQVALKEGTTLEAKKN 351 (357)
Q Consensus 322 ~~g~~~~-------~~g~~~-------~A~~~~~~al~l~~~~~ 351 (357)
++|.++. .+|+++ +|+..|++++.++|.+.
T Consensus 111 ~la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~~ 154 (168)
T CHL00033 111 NMAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGNY 154 (168)
T ss_pred HHHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCcccH
Confidence 9999999 777766 66667777888888654
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-11 Score=120.21 Aligned_cols=90 Identities=18% Similarity=0.098 Sum_probs=68.8
Q ss_pred cCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHH
Q 018348 262 KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 341 (357)
Q Consensus 262 ~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~ 341 (357)
+++++|+..+++|++++|+ ++.++..+|.++...|++++|+..|++|++++|+++.+|+.+|.++..+|++++|+..|+
T Consensus 318 ~~~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~ 396 (553)
T PRK12370 318 NAMIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTIN 396 (553)
T ss_pred hHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 3467777777777777777 777777777777777777777777777777777777777777777777777777777777
Q ss_pred Hhhcccccccc
Q 018348 342 EGTTLEAKKNS 352 (357)
Q Consensus 342 ~al~l~~~~~~ 352 (357)
+|++++|.+..
T Consensus 397 ~Al~l~P~~~~ 407 (553)
T PRK12370 397 ECLKLDPTRAA 407 (553)
T ss_pred HHHhcCCCChh
Confidence 77777777643
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.7e-12 Score=116.00 Aligned_cols=68 Identities=19% Similarity=0.157 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHhcCCCceecCC-CCCCeeeCCCCCeEEecCCCccccCCCC------------CccCCCCCCchhhh
Q 018348 24 LRVVLHLAQALEYCTSKGRALYHDL-NAYRILFDEDGNPRLSTFGLMKNSRDGK------------SYSTNLAFTPPEYL 90 (357)
Q Consensus 24 ~~i~~~i~~~l~~lH~~~~~~H~dl-k~~Nill~~~~~~kl~dfg~~~~~~~~~------------~~~gt~~y~aPE~~ 90 (357)
..++.+++.+|.|||+.+ |+|||| ||+|||++.++.++|+|||+++.+.... ...+++.|++||.+
T Consensus 114 ~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~ 192 (365)
T PRK09188 114 PAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDAL 192 (365)
T ss_pred HHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccC
Confidence 467899999999999999 999999 9999999999999999999988654332 22467789999988
Q ss_pred cC
Q 018348 91 RT 92 (357)
Q Consensus 91 ~~ 92 (357)
..
T Consensus 193 ~~ 194 (365)
T PRK09188 193 TP 194 (365)
T ss_pred Ch
Confidence 65
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.4e-11 Score=122.57 Aligned_cols=165 Identities=16% Similarity=0.173 Sum_probs=119.6
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC-------CCCCeEEecCCCcccc--
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-------EDGNPRLSTFGLMKNS-- 72 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~-------~~~~~kl~dfg~~~~~-- 72 (357)
+.|||-|++. ..+.++|..++.++.|+++.++.||..+ ||||||||+|++|. ....++|+|||-+..+
T Consensus 777 ~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l 853 (974)
T KOG1166|consen 777 PYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL 853 (974)
T ss_pred ccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceeeeE
Confidence 6799999997 6789999999999999999999999999 99999999999983 2345899999976543
Q ss_pred -CCCCCc---cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhH
Q 018348 73 -RDGKSY---STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 148 (357)
Q Consensus 73 -~~~~~~---~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (357)
.+...+ .+|-.+-.+|...+.+.+...|.|.|+.+++-|+.|+.. . ...+....+... ++ .+...
T Consensus 854 fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~------q-~~~g~~~~~~~~-~~-Ry~~~-- 922 (974)
T KOG1166|consen 854 FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM------E-VKNGSSWMVKTN-FP-RYWKR-- 922 (974)
T ss_pred cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH------H-hcCCcceecccc-ch-hhhhH--
Confidence 344333 457889999999999999999999999999999999631 1 111111111111 11 11111
Q ss_pred HHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 149 TELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 149 ~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
.-..+++..+|+.|-..=|...++...++...
T Consensus 923 ~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 923 DMWNKFFDLLLNPDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred HHHHHHHHHHhCcCcccchhHHHHHHHHHHHH
Confidence 23456777888844444467777776665553
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.9e-11 Score=110.28 Aligned_cols=108 Identities=15% Similarity=0.139 Sum_probs=102.6
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..++++.-.|..++-.|++-.|-..|+++|.++|. +...|..+|..|...++-++-.++|.+|..+||.+++.||.+|.
T Consensus 324 ~~A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQ 402 (606)
T KOG0547|consen 324 YMAEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQ 402 (606)
T ss_pred HHHHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHH
Confidence 45888999999999999999999999999999999 77889999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+++-+++|++|+++|++|++|+|++.-+.
T Consensus 403 m~flL~q~e~A~aDF~Kai~L~pe~~~~~ 431 (606)
T KOG0547|consen 403 MRFLLQQYEEAIADFQKAISLDPENAYAY 431 (606)
T ss_pred HHHHHHHHHHHHHHHHHHhhcChhhhHHH
Confidence 99999999999999999999999987554
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.8e-11 Score=101.56 Aligned_cols=94 Identities=16% Similarity=0.099 Sum_probs=88.5
Q ss_pred hccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH-HHcCC--hHHH
Q 018348 260 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL-SAMGM--ENEA 336 (357)
Q Consensus 260 ~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~-~~~g~--~~~A 336 (357)
..++.++++..++++++.+|+ +...|.++|.+|..+|++++|+..|++|++++|+++.+++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 468889999999999999999 9999999999999999999999999999999999999999999985 67788 5999
Q ss_pred HHHHHHhhcccccccccc
Q 018348 337 QVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 337 ~~~~~~al~l~~~~~~a~ 354 (357)
.+.++++++++|++..++
T Consensus 130 ~~~l~~al~~dP~~~~al 147 (198)
T PRK10370 130 REMIDKALALDANEVTAL 147 (198)
T ss_pred HHHHHHHHHhCCCChhHH
Confidence 999999999999998765
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.9e-11 Score=94.72 Aligned_cols=99 Identities=9% Similarity=-0.065 Sum_probs=96.4
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
+..+..+..|..++.+|+|++|...|+-....+|. ++.++..+|.|+..+++|++|+..|..|..++++++...|..|.
T Consensus 35 ~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agq 113 (165)
T PRK15331 35 DMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQ 113 (165)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHH
Confidence 67788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhc
Q 018348 326 ALSAMGMENEAQVALKEGTT 345 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~ 345 (357)
|+..+|+.++|+.+|+.+++
T Consensus 114 C~l~l~~~~~A~~~f~~a~~ 133 (165)
T PRK15331 114 CQLLMRKAAKARQCFELVNE 133 (165)
T ss_pred HHHHhCCHHHHHHHHHHHHh
Confidence 99999999999999999988
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=3e-11 Score=117.59 Aligned_cols=106 Identities=9% Similarity=-0.061 Sum_probs=96.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
+.+..+...|..+...|++++|+..|++|++++|+ ++.+++++|.++..+|++++|+..++++++++|.++.+++.++.
T Consensus 336 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~~~ 414 (553)
T PRK12370 336 NNPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLW 414 (553)
T ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHHHH
Confidence 56777888999999999999999999999999999 89999999999999999999999999999999999988888888
Q ss_pred HHHHcCChHHHHHHHHHhhccc-ccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLE-AKKNS 352 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~-~~~~~ 352 (357)
+++.+|++++|+..++++++.. |++..
T Consensus 415 ~~~~~g~~eeA~~~~~~~l~~~~p~~~~ 442 (553)
T PRK12370 415 ITYYHTGIDDAIRLGDELRSQHLQDNPI 442 (553)
T ss_pred HHHhccCHHHHHHHHHHHHHhccccCHH
Confidence 8889999999999999999875 55543
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.1e-11 Score=96.09 Aligned_cols=88 Identities=16% Similarity=0.023 Sum_probs=82.1
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
........+..+|.++...|+|++|+..|+++++++|+ ++.+++++|.|+..+|++++|+..|++|++++|+++.+|.+
T Consensus 53 ~~P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~~~ 131 (144)
T PRK15359 53 AQPWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEI 131 (144)
T ss_pred cCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 33467788999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHcC
Q 018348 323 QAAALSAMG 331 (357)
Q Consensus 323 ~g~~~~~~g 331 (357)
+|.+...++
T Consensus 132 ~~~~~~~l~ 140 (144)
T PRK15359 132 RQNAQIMVD 140 (144)
T ss_pred HHHHHHHHH
Confidence 999877653
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.2e-11 Score=104.51 Aligned_cols=109 Identities=17% Similarity=0.096 Sum_probs=99.7
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcch---HHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchH---
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI--- 318 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~--- 318 (357)
...+..++..|..++..|+|++|+..|++++..+|+ ++ .+++.+|.+|...|++++|+..++++++.+|+++.
T Consensus 30 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~ 108 (235)
T TIGR03302 30 EWPAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADY 108 (235)
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHH
Confidence 356778899999999999999999999999999998 54 57899999999999999999999999999998877
Q ss_pred HHHHHHHHHHHc--------CChHHHHHHHHHhhcccccccccc
Q 018348 319 ASYLQAAALSAM--------GMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 319 a~~~~g~~~~~~--------g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+++.+|.+++.+ |++++|++.|+++++.+|++..++
T Consensus 109 a~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 152 (235)
T TIGR03302 109 AYYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSEYAP 152 (235)
T ss_pred HHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCChhHH
Confidence 799999999987 899999999999999999987543
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.3e-11 Score=117.51 Aligned_cols=102 Identities=12% Similarity=-0.026 Sum_probs=52.4
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
+.+++....|..+.+.+++++|+..+++++..+|+ ++..++++|.++.++|++++|+..|++++..+|+++.++..+|.
T Consensus 118 d~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~-~~~~~~~~a~~l~~~g~~~~A~~~y~~~~~~~p~~~~~~~~~a~ 196 (694)
T PRK15179 118 DSSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSS-SAREILLEAKSWDEIGQSEQADACFERLSRQHPEFENGYVGWAQ 196 (694)
T ss_pred CcHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 44444455555555555555555555555555555 45555555555555555555555555555555555555555555
Q ss_pred HHHHcCChHHHHHHHHHhhcccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
++..+|+.++|..+|++|++...
T Consensus 197 ~l~~~G~~~~A~~~~~~a~~~~~ 219 (694)
T PRK15179 197 SLTRRGALWRARDVLQAGLDAIG 219 (694)
T ss_pred HHHHcCCHHHHHHHHHHHHHhhC
Confidence 55555555555555555554433
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.6e-11 Score=83.63 Aligned_cols=63 Identities=19% Similarity=0.082 Sum_probs=41.3
Q ss_pred hHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 288 RRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 288 ~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
.+|..++..|++++|++.|+++++.+|+++.+|+.+|.++..+|++++|+..|+++++++|++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 356666666666666666666666666666666666666666666666666666666666665
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.24 E-value=1e-11 Score=103.69 Aligned_cols=67 Identities=15% Similarity=0.229 Sum_probs=56.1
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~l-H~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
+|++|...+. +.++++...+..++.|++.+|.++ |+.+ ++||||||+||+++ ++.++|+|||++...
T Consensus 100 ~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 100 GDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 4555554432 346899999999999999999999 6888 99999999999998 578999999998654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.1e-11 Score=96.93 Aligned_cols=109 Identities=12% Similarity=-0.015 Sum_probs=100.2
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHh--CCCchHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII--SPIWHIASY 321 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l--~p~~~~a~~ 321 (357)
..+...++.-+|..|.+.|+.+.|-+.|++|+.++|+ +.++++|.|..+..+|++++|...|++|+.. .|.-++.|-
T Consensus 65 DPs~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~e 143 (250)
T COG3063 65 DPSYYLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLE 143 (250)
T ss_pred CcccHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhh
Confidence 3456677888999999999999999999999999999 9999999999999999999999999999974 466778999
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 322 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 322 ~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
|+|.|-.++|+.+.|.++|+++|++||++..+
T Consensus 144 N~G~Cal~~gq~~~A~~~l~raL~~dp~~~~~ 175 (250)
T COG3063 144 NLGLCALKAGQFDQAEEYLKRALELDPQFPPA 175 (250)
T ss_pred hhHHHHhhcCCchhHHHHHHHHHHhCcCCChH
Confidence 99999999999999999999999999998754
|
|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.4e-10 Score=99.47 Aligned_cols=109 Identities=10% Similarity=-0.003 Sum_probs=96.8
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhC--CCchHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS--PIWHIASYL 322 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~--p~~~~a~~~ 322 (357)
...+..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|++.+.+++... +.....+++
T Consensus 62 p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~ 140 (234)
T TIGR02521 62 PDDYLAYLALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSLEN 140 (234)
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHHHH
Confidence 355678888999999999999999999999999999 78899999999999999999999999999864 566778999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|.++..+|++++|...|+++++.+|++..++
T Consensus 141 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 172 (234)
T TIGR02521 141 AGLCALKAGDFDKAEKYLTRALQIDPQRPESL 172 (234)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCcCChHHH
Confidence 99999999999999999999999999876543
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.3e-10 Score=97.66 Aligned_cols=105 Identities=11% Similarity=0.004 Sum_probs=97.4
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.+.+-+..+|...+..|+|.+|+..+.+|.+++|+ ++.+|+.+|.+|.+.|++++|-..|.+|+++.|+.+.+..|+|+
T Consensus 98 ~d~~ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~nNlgm 176 (257)
T COG5010 98 KDRELLAAQGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIANNLGM 176 (257)
T ss_pred ccHHHHHHHHHHHHHhcchHHHHHHHHHHhccCCC-ChhhhhHHHHHHHHccChhHHHHHHHHHHHhccCCchhhhhHHH
Confidence 33344556999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
.|+-.|+++.|...+.++....+.+.
T Consensus 177 s~~L~gd~~~A~~lll~a~l~~~ad~ 202 (257)
T COG5010 177 SLLLRGDLEDAETLLLPAYLSPAADS 202 (257)
T ss_pred HHHHcCCHHHHHHHHHHHHhCCCCch
Confidence 99999999999999999987766554
|
|
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.5e-10 Score=100.84 Aligned_cols=104 Identities=12% Similarity=0.006 Sum_probs=93.9
Q ss_pred HHHHHHHhHH-HhccCHHHHHHHHHHHhhcCCCcc---hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCC---chHHHH
Q 018348 249 LNSKKKGDVA-FRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPI---WHIASY 321 (357)
Q Consensus 249 ~~~~~~g~~~-~~~~~~~~Ai~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~---~~~a~~ 321 (357)
...++.|..+ ++.|+|++|+..|++.++..|+ + +.+++.+|.+|+..|++++|+..|.++++..|+ .+++++
T Consensus 143 ~~~Y~~A~~l~~~~~~y~~Ai~af~~fl~~yP~-s~~a~~A~y~LG~~y~~~g~~~~A~~~f~~vv~~yP~s~~~~dAl~ 221 (263)
T PRK10803 143 NTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPD-STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMF 221 (263)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCcchhHHHH
Confidence 4556777776 6679999999999999999999 5 578999999999999999999999999998887 577899
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 322 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 322 ~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
.+|.++..+|++++|+..|+++++..|+...+
T Consensus 222 klg~~~~~~g~~~~A~~~~~~vi~~yP~s~~a 253 (263)
T PRK10803 222 KVGVIMQDKGDTAKAKAVYQQVIKKYPGTDGA 253 (263)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCCHHH
Confidence 99999999999999999999999999988754
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.7e-11 Score=80.50 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=60.6
Q ss_pred HHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch
Q 018348 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 317 (357)
Q Consensus 252 ~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 317 (357)
+.+|..+++.|+|++|+..|+++++.+|+ ++.+++.+|.++..+|++++|+..|+++++++|+++
T Consensus 1 ~~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 1 YALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred ChHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 36799999999999999999999999999 999999999999999999999999999999999975
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=7.6e-12 Score=106.14 Aligned_cols=92 Identities=13% Similarity=0.102 Sum_probs=67.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 80 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~g 80 (357)
++|.+|.++. .++. ....+++.+|..+|..+ ++|||+||+||+++.+| ++++|||...........
T Consensus 125 i~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~-- 190 (232)
T PRK10359 125 IEGVELNDMP------EISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK-- 190 (232)
T ss_pred ECCccHHHhh------hccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEECCCcccccchhhH--
Confidence 3566776653 1222 34669999999999999 99999999999999888 999999987655322211
Q ss_pred CCCCCchhhhcCCCCCCcccchhHHHHHHHHH
Q 018348 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 112 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~ 112 (357)
..++....+..++|+||||+++.-+.
T Consensus 191 ------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 191 ------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ------HHHHHHhHhcccccccceeEeehHHH
Confidence 11233344567999999999887653
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-10 Score=104.13 Aligned_cols=112 Identities=9% Similarity=-0.059 Sum_probs=100.8
Q ss_pred hhhHhhHHHHHHHhHHHhccCH--HHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDL--KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 320 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~--~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 320 (357)
...+..+.|..++..+.+.|+. ++++.+++++|+++|+ +..+|.+++.++..+|++++|+++++++|++||.+..||
T Consensus 101 ~npknyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpk-Ny~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~sAW 179 (320)
T PLN02789 101 DNPKNYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAK-NYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNNSAW 179 (320)
T ss_pred HCCcchHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCchhHH
Confidence 3456677799999888888874 7889999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc---CCh----HHHHHHHHHhhccccccccccC
Q 018348 321 YLQAAALSAM---GME----NEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 321 ~~~g~~~~~~---g~~----~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+.+|.++..+ |.+ ++++++..++++++|+|.++|.
T Consensus 180 ~~R~~vl~~~~~l~~~~~~~e~el~y~~~aI~~~P~N~SaW~ 221 (320)
T PLN02789 180 NQRYFVITRSPLLGGLEAMRDSELKYTIDAILANPRNESPWR 221 (320)
T ss_pred HHHHHHHHhccccccccccHHHHHHHHHHHHHhCCCCcCHHH
Confidence 9999999887 444 4788888999999999999984
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.5e-11 Score=105.67 Aligned_cols=94 Identities=17% Similarity=0.031 Sum_probs=86.0
Q ss_pred cCHHHHHHHHHHHhh---cCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHH
Q 018348 262 KDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQV 338 (357)
Q Consensus 262 ~~~~~Ai~~~~~ai~---~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~ 338 (357)
+..+.+|..++++|. ++|...+.+|+++|.+|...|++++|+.+|+++++++|+++.+|+++|.++..+|++++|+.
T Consensus 40 ~~~e~~i~~~~~~l~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~A~~ 119 (296)
T PRK11189 40 LQQEVILARLNQILASRDLTDEERAQLHYERGVLYDSLGLRALARNDFSQALALRPDMADAYNYLGIYLTQAGNFDAAYE 119 (296)
T ss_pred hHHHHHHHHHHHHHccccCCcHhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCHHHHHH
Confidence 456889999999996 55553578899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccccccccC
Q 018348 339 ALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 339 ~~~~al~l~~~~~~a~~ 355 (357)
+|++|++++|++..+|.
T Consensus 120 ~~~~Al~l~P~~~~a~~ 136 (296)
T PRK11189 120 AFDSVLELDPTYNYAYL 136 (296)
T ss_pred HHHHHHHhCCCCHHHHH
Confidence 99999999999987754
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.7e-12 Score=122.84 Aligned_cols=171 Identities=18% Similarity=0.206 Sum_probs=124.1
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCceecCCCCCCeeeCCCC-CeEEecCCCccccCC-CC--
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT-SKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD-GK-- 76 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~~~~H~dlk~~Nill~~~~-~~kl~dfg~~~~~~~-~~-- 76 (357)
.||++.+-+........+......++.|+..++.|+| ..+ +.|+|+||+|.+++..+ ..+++|||++..+.. ..
T Consensus 104 ~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~ 182 (601)
T KOG0590|consen 104 DGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAE 182 (601)
T ss_pred cccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccccCCcc
Confidence 4667777773212225666678899999999999999 888 99999999999999999 999999999887665 22
Q ss_pred ----CccC-CCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 77 ----SYST-NLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 77 ----~~~g-t~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...| ++.|++||...+. ...+..|+||.|+++.-+++|..|+............+..... .............
T Consensus 183 ~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 261 (601)
T KOG0590|consen 183 RSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKG-RFTQLPWNSISDQ 261 (601)
T ss_pred eeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccc-ccccCccccCChh
Confidence 2357 9999999999873 4577899999999999999999776443222111111111100 0011223344567
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHH
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...++.+++..+|+.|.+.+++..
T Consensus 262 ~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 262 AHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred hhhcccccccCCchhccccccccc
Confidence 788999999999999999888764
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.8e-11 Score=101.28 Aligned_cols=58 Identities=17% Similarity=0.287 Sum_probs=52.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCCCCeeeCCCCCeEEecCCCccccCC
Q 018348 15 THPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 74 (357)
Q Consensus 15 ~~~l~~~~~~~i~~~i~~~l~~lH~-~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~ 74 (357)
...++......++.+++.++.++|+ .+ ++||||||.||+++ ++.++|+|||+++....
T Consensus 111 ~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 111 DVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence 4567888999999999999999999 88 99999999999999 88999999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-10 Score=103.63 Aligned_cols=106 Identities=17% Similarity=0.065 Sum_probs=90.5
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
....+|.-.|..++..++-..||+.|++||+++|. +..+|+-+|.+|..++.+.=|+-+|++|+++.|.++..|-.+|.
T Consensus 362 ~~~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~-DyRAWYGLGQaYeim~Mh~YaLyYfqkA~~~kPnDsRlw~aLG~ 440 (559)
T KOG1155|consen 362 KYLSAWTLMGHEYVEMKNTHAAIESYRRAVDINPR-DYRAWYGLGQAYEIMKMHFYALYYFQKALELKPNDSRLWVALGE 440 (559)
T ss_pred chhHHHHHhhHHHHHhcccHHHHHHHHHHHhcCch-hHHHHhhhhHHHHHhcchHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 34445555688888899999999999999999999 88889999999999999989999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
||.++++.++|+++|++|+.....+..
T Consensus 441 CY~kl~~~~eAiKCykrai~~~dte~~ 467 (559)
T KOG1155|consen 441 CYEKLNRLEEAIKCYKRAILLGDTEGS 467 (559)
T ss_pred HHHHhccHHHHHHHHHHHHhccccchH
Confidence 999999999999999999887766543
|
|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.4e-10 Score=112.16 Aligned_cols=119 Identities=10% Similarity=-0.062 Sum_probs=107.2
Q ss_pred hhhhhhhhhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCC
Q 018348 235 ELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP 314 (357)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p 314 (357)
...........+.+..++..|......|++++|+..|+++++.+|+ ++.++..+|.++...|++++|+..++++++++|
T Consensus 63 ~l~~~~l~~~p~~~~~l~~l~~~~l~~g~~~~A~~~l~~~l~~~P~-~~~a~~~la~~l~~~g~~~~Ai~~l~~Al~l~P 141 (656)
T PRK15174 63 TLLSDRVLTAKNGRDLLRRWVISPLASSQPDAVLQVVNKLLAVNVC-QPEDVLLVASVLLKSKQYATVADLAEQAWLAFS 141 (656)
T ss_pred HHhHHHHHhCCCchhHHHHHhhhHhhcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3444455566688889999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 315 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 315 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+++.++..+|.++..+|++++|+..+++++..+|++..++
T Consensus 142 ~~~~a~~~la~~l~~~g~~~eA~~~~~~~~~~~P~~~~a~ 181 (656)
T PRK15174 142 GNSQIFALHLRTLVLMDKELQAISLARTQAQEVPPRGDMI 181 (656)
T ss_pred CcHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999999999998876543
|
|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.5e-10 Score=96.90 Aligned_cols=106 Identities=15% Similarity=0.084 Sum_probs=96.1
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcC--CCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG--TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~--p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
.....+...|..++..|++++|+..|+++++.. +. ....+.++|.++...|++++|+..+.++++.+|++..+++.+
T Consensus 97 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l 175 (234)
T TIGR02521 97 NNGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQ-PARSLENAGLCALKAGDFDKAEKYLTRALQIDPQRPESLLEL 175 (234)
T ss_pred CCHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCChHHHHHH
Confidence 455678889999999999999999999999864 34 567888999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 324 AAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
|.++..+|++++|+..+++++++.|.+..
T Consensus 176 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 204 (234)
T TIGR02521 176 AELYYLRGQYKDARAYLERYQQTYNQTAE 204 (234)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 99999999999999999999999766543
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.1e-11 Score=105.76 Aligned_cols=110 Identities=22% Similarity=0.241 Sum_probs=104.0
Q ss_pred hhhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHH
Q 018348 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 320 (357)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 320 (357)
-.+.++++...+.++..++..|+++.||+.|+.||+++|. .+.+|.+|+.+++++++...|+.+|..|++++|+..+.|
T Consensus 107 Tee~~eqa~e~k~~A~eAln~G~~~~ai~~~t~ai~lnp~-~a~l~~kr~sv~lkl~kp~~airD~d~A~ein~Dsa~~y 185 (377)
T KOG1308|consen 107 TEEMMDQANDKKVQASEALNDGEFDTAIELFTSAIELNPP-LAILYAKRASVFLKLKKPNAAIRDCDFAIEINPDSAKGY 185 (377)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcchhhhhcccccccccCCc-hhhhcccccceeeeccCCchhhhhhhhhhccCccccccc
Confidence 3466688889999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 321 YLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 321 ~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
--+|.+...+|++++|..+|..|.++|-+..
T Consensus 186 kfrg~A~rllg~~e~aa~dl~~a~kld~dE~ 216 (377)
T KOG1308|consen 186 KFRGYAERLLGNWEEAAHDLALACKLDYDEA 216 (377)
T ss_pred chhhHHHHHhhchHHHHHHHHHHHhccccHH
Confidence 9999999999999999999999999987654
|
|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-10 Score=104.17 Aligned_cols=100 Identities=13% Similarity=0.052 Sum_probs=96.4
Q ss_pred HHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCh
Q 018348 254 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGME 333 (357)
Q Consensus 254 ~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~ 333 (357)
.||-|--.++.+.|+.+|++|+++||. ...+|...|.=|..+++...|++.|.+|++++|.+..|||.+|++|.-++..
T Consensus 336 IaNYYSlr~eHEKAv~YFkRALkLNp~-~~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~DyRAWYGLGQaYeim~Mh 414 (559)
T KOG1155|consen 336 IANYYSLRSEHEKAVMYFKRALKLNPK-YLSAWTLMGHEYVEMKNTHAAIESYRRAVDINPRDYRAWYGLGQAYEIMKMH 414 (559)
T ss_pred ehhHHHHHHhHHHHHHHHHHHHhcCcc-hhHHHHHhhHHHHHhcccHHHHHHHHHHHhcCchhHHHHhhhhHHHHHhcch
Confidence 488888899999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccccccc
Q 018348 334 NEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 334 ~~A~~~~~~al~l~~~~~~a~ 354 (357)
.=|+-+|++|+++.|+++.-|
T Consensus 415 ~YaLyYfqkA~~~kPnDsRlw 435 (559)
T KOG1155|consen 415 FYALYYFQKALELKPNDSRLW 435 (559)
T ss_pred HHHHHHHHHHHhcCCCchHHH
Confidence 999999999999999998766
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.6e-10 Score=116.28 Aligned_cols=98 Identities=13% Similarity=0.043 Sum_probs=89.1
Q ss_pred HhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChH
Q 018348 255 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMEN 334 (357)
Q Consensus 255 g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~ 334 (357)
+......|++++|+..|+++++++|+ +.++.++|.++.++|++++|+..++++++++|+++.+++++|.++..+|+++
T Consensus 583 a~~l~~~Gr~~eAl~~~~~AL~l~P~--~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd~~~a~~nLG~aL~~~G~~e 660 (987)
T PRK09782 583 HAQRYIPGQPELALNDLTRSLNIAPS--ANAYVARATIYRQRHNVPAAVSDLRAALELEPNNSNYQAALGYALWDSGDIA 660 (987)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHH
Confidence 33444559999999999999999996 6788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccccccc
Q 018348 335 EAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 335 ~A~~~~~~al~l~~~~~~a~ 354 (357)
+|+..|++|++++|++..++
T Consensus 661 eAi~~l~~AL~l~P~~~~a~ 680 (987)
T PRK09782 661 QSREMLERAHKGLPDDPALI 680 (987)
T ss_pred HHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999987654
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.4e-10 Score=108.56 Aligned_cols=104 Identities=17% Similarity=0.116 Sum_probs=51.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
+.-.+|+..|.+|+++++++.|.-.|++|++++|. +.......|..+.++|+.++|+..+++|+.+||.++-.-|.+|.
T Consensus 487 rhYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~-nsvi~~~~g~~~~~~k~~d~AL~~~~~A~~ld~kn~l~~~~~~~ 565 (638)
T KOG1126|consen 487 RHYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPS-NSVILCHIGRIQHQLKRKDKALQLYEKAIHLDPKNPLCKYHRAS 565 (638)
T ss_pred hhhHHHHhhhhheeccchhhHHHHHHHhhhcCCcc-chhHHhhhhHHHHHhhhhhHHHHHHHHHHhcCCCCchhHHHHHH
Confidence 33344444555555555555555555555555555 44444444555555555555555555555555555555555555
Q ss_pred HHHHcCChHHHHHHHHHhhcccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
+++.+++|++|+..+++.-++.|++
T Consensus 566 il~~~~~~~eal~~LEeLk~~vP~e 590 (638)
T KOG1126|consen 566 ILFSLGRYVEALQELEELKELVPQE 590 (638)
T ss_pred HHHhhcchHHHHHHHHHHHHhCcch
Confidence 5555555555555555444444443
|
|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.7e-10 Score=111.91 Aligned_cols=105 Identities=17% Similarity=0.032 Sum_probs=67.7
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
+.+..+...|..+...|++++|+..|+++++++|+ ++.++.++|.+|...|++++|+..|+++++.+|++..+++.+|.
T Consensus 282 ~~~~a~~~lg~~l~~~g~~~eA~~~l~~al~l~P~-~~~a~~~La~~l~~~G~~~eA~~~l~~al~~~P~~~~~~~~~a~ 360 (656)
T PRK15174 282 DNVRIVTLYADALIRTGQNEKAIPLLQQSLATHPD-LPYVRAMYARALRQVGQYTAASDEFVQLAREKGVTSKWNRYAAA 360 (656)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 34455566666666666666666666666666666 56666666666666666666666666666666666655555666
Q ss_pred HHHHcCChHHHHHHHHHhhccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
++..+|++++|+..|+++++++|++.
T Consensus 361 al~~~G~~deA~~~l~~al~~~P~~~ 386 (656)
T PRK15174 361 ALLQAGKTSEAESVFEHYIQARASHL 386 (656)
T ss_pred HHHHCCCHHHHHHHHHHHHHhChhhc
Confidence 66666666666666666666666543
|
|
| >KOG4162 consensus Predicted calmodulin-binding protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.5e-10 Score=107.40 Aligned_cols=109 Identities=15% Similarity=0.079 Sum_probs=102.0
Q ss_pred hhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHH--HHHHHHHhCCCchHH
Q 018348 242 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN--DAMQAQIISPIWHIA 319 (357)
Q Consensus 242 ~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~--~~~~al~l~p~~~~a 319 (357)
....-.+.-|+..|..+..+|++++|.+.|..|+.+||+ .......+|.++.+.|+...|.. .+..|+++||.+++|
T Consensus 678 ~~~~l~~~~~~~~G~~~~~~~~~~EA~~af~~Al~ldP~-hv~s~~Ala~~lle~G~~~la~~~~~L~dalr~dp~n~ea 756 (799)
T KOG4162|consen 678 KIDPLSASVYYLRGLLLEVKGQLEEAKEAFLVALALDPD-HVPSMTALAELLLELGSPRLAEKRSLLSDALRLDPLNHEA 756 (799)
T ss_pred hcchhhHHHHHHhhHHHHHHHhhHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHhCCcchHHHHHHHHHHHhhCCCCHHH
Confidence 344566778899999999999999999999999999999 78888889999999999999998 999999999999999
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 320 SYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 320 ~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
||++|.++..+|+.++|.++|..|++|++.++
T Consensus 757 W~~LG~v~k~~Gd~~~Aaecf~aa~qLe~S~P 788 (799)
T KOG4162|consen 757 WYYLGEVFKKLGDSKQAAECFQAALQLEESNP 788 (799)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHhhccCCC
Confidence 99999999999999999999999999999876
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.7e-10 Score=110.98 Aligned_cols=111 Identities=5% Similarity=-0.091 Sum_probs=106.1
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
.+++.+..++..|....+.|.+++|+..++.++++.|+ +..++.+++.++.+++++++|+..+++++..+|+++.+++.
T Consensus 81 ~~~~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~~ 159 (694)
T PRK15179 81 RYPHTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREILL 159 (694)
T ss_pred hccccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHHH
Confidence 45577999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|.++.++|+|++|++.|+++++.+|++.++|
T Consensus 160 ~a~~l~~~g~~~~A~~~y~~~~~~~p~~~~~~ 191 (694)
T PRK15179 160 EAKSWDEIGQSEQADACFERLSRQHPEFENGY 191 (694)
T ss_pred HHHHHHHhcchHHHHHHHHHHHhcCCCcHHHH
Confidence 99999999999999999999999888877665
|
|
| >PRK10049 pgaA outer membrane protein PgaA; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.4e-10 Score=112.36 Aligned_cols=135 Identities=9% Similarity=-0.011 Sum_probs=113.2
Q ss_pred HHHHHHHhcccCcchhhhhhhhhhhhh-hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHh
Q 018348 217 IHEILEKISYKDDEGVANELSFQMWTD-QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM 295 (357)
Q Consensus 217 l~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~ 295 (357)
|..+..-..|......+. ..++.... ....+..+...|..+...|++++|+..|+++++++|. ++.++..++.++..
T Consensus 18 ~~d~~~ia~~~g~~~~A~-~~~~~~~~~~~~~a~~~~~lA~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~l~~ 95 (765)
T PRK10049 18 IADWLQIALWAGQDAEVI-TVYNRYRVHMQLPARGYAAVAVAYRNLKQWQNSLTLWQKALSLEPQ-NDDYQRGLILTLAD 95 (765)
T ss_pred HHHHHHHHHHcCCHHHHH-HHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH
Confidence 334444444555444433 33333332 4456667999999999999999999999999999999 89999999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 296 SDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 296 ~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
.|++++|+..++++++.+|+++. ++.+|.++..+|++++|+..|+++++++|++..++
T Consensus 96 ~g~~~eA~~~l~~~l~~~P~~~~-~~~la~~l~~~g~~~~Al~~l~~al~~~P~~~~~~ 153 (765)
T PRK10049 96 AGQYDEALVKAKQLVSGAPDKAN-LLALAYVYKRAGRHWDELRAMTQALPRAPQTQQYP 153 (765)
T ss_pred CCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999 99999999999999999999999999999987654
|
|
| >COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1e-09 Score=94.63 Aligned_cols=112 Identities=17% Similarity=0.047 Sum_probs=102.4
Q ss_pred hhhhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcC---ChHHHHHHHHHHHHhCCCc
Q 018348 240 MWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIISPIW 316 (357)
Q Consensus 240 ~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~l~p~~ 316 (357)
...+...+++.|.-.|..|+..|++..|...|.+|+++.|+ +++++.-+|.++..+. ...+|...+++++++||.+
T Consensus 148 ~L~~nP~d~egW~~Lg~~ym~~~~~~~A~~AY~~A~rL~g~-n~~~~~g~aeaL~~~a~~~~ta~a~~ll~~al~~D~~~ 226 (287)
T COG4235 148 HLQQNPGDAEGWDLLGRAYMALGRASDALLAYRNALRLAGD-NPEILLGLAEALYYQAGQQMTAKARALLRQALALDPAN 226 (287)
T ss_pred HHHhCCCCchhHHHHHHHHHHhcchhHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhcCCcc
Confidence 33456688999999999999999999999999999999999 9999999988877753 4678999999999999999
Q ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 317 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 317 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
..+.+.+|..+++.|+|.+|+..+++.+++.|.+..
T Consensus 227 iral~lLA~~afe~g~~~~A~~~Wq~lL~~lp~~~~ 262 (287)
T COG4235 227 IRALSLLAFAAFEQGDYAEAAAAWQMLLDLLPADDP 262 (287)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCCCCCc
Confidence 999999999999999999999999999999988764
|
|
| >PF13512 TPR_18: Tetratricopeptide repeat | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.1e-09 Score=83.15 Aligned_cols=107 Identities=8% Similarity=0.039 Sum_probs=97.2
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc--chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchH---HHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI---ASY 321 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~---a~~ 321 (357)
.+..+++.|...++.|+|++|++.|+.....-|.. ...+...++.+|.+.+++++|+..+++-|+++|.++. |+|
T Consensus 9 ~~~~ly~~a~~~l~~~~Y~~A~~~le~L~~ryP~g~ya~qAqL~l~yayy~~~~y~~A~a~~~rFirLhP~hp~vdYa~Y 88 (142)
T PF13512_consen 9 SPQELYQEAQEALQKGNYEEAIKQLEALDTRYPFGEYAEQAQLDLAYAYYKQGDYEEAIAAYDRFIRLHPTHPNVDYAYY 88 (142)
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCCccHHHH
Confidence 46789999999999999999999999999988872 3568889999999999999999999999999998865 799
Q ss_pred HHHHHHHHcCC---------------hHHHHHHHHHhhccccccccc
Q 018348 322 LQAAALSAMGM---------------ENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 322 ~~g~~~~~~g~---------------~~~A~~~~~~al~l~~~~~~a 353 (357)
.+|.+++.+.. ..+|...|++.++.-|++.-+
T Consensus 89 ~~gL~~~~~~~~~~~~~~~~drD~~~~~~A~~~f~~lv~~yP~S~ya 135 (142)
T PF13512_consen 89 MRGLSYYEQDEGSLQSFFRSDRDPTPARQAFRDFEQLVRRYPNSEYA 135 (142)
T ss_pred HHHHHHHHHhhhHHhhhcccccCcHHHHHHHHHHHHHHHHCcCChhH
Confidence 99999999988 999999999999999988744
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.06 E-value=6.2e-10 Score=87.63 Aligned_cols=85 Identities=11% Similarity=-0.056 Sum_probs=79.8
Q ss_pred HHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccc
Q 018348 269 ECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 269 ~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
+.|+++++.+|+ +......+|.++...|++++|+..+++++.++|.++.+|+++|.++..+|++++|+.+|+++++++|
T Consensus 4 ~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p 82 (135)
T TIGR02552 4 ATLKDLLGLDSE-QLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPYNSRYWLGLAACCQMLKEYEEAIDAYALAAALDP 82 (135)
T ss_pred hhHHHHHcCChh-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 357899999999 7888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 018348 349 KKNSTA 354 (357)
Q Consensus 349 ~~~~a~ 354 (357)
.+...+
T Consensus 83 ~~~~~~ 88 (135)
T TIGR02552 83 DDPRPY 88 (135)
T ss_pred CChHHH
Confidence 886543
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.7e-09 Score=104.38 Aligned_cols=105 Identities=18% Similarity=0.102 Sum_probs=85.6
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..+..+|+.+|..|++++|+..+.++|+++|. ++.+|+.+|.+|.++|+.++|+...-.|-.++|++.+-|...+.
T Consensus 137 ~~l~~ll~eAN~lfarg~~eeA~~i~~EvIkqdp~-~~~ay~tL~~IyEqrGd~eK~l~~~llAAHL~p~d~e~W~~lad 215 (895)
T KOG2076|consen 137 PELRQLLGEANNLFARGDLEEAEEILMEVIKQDPR-NPIAYYTLGEIYEQRGDIEKALNFWLLAAHLNPKDYELWKRLAD 215 (895)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcc-chhhHHHHHHHHHHcccHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 44677778888888888888888888888888888 77888888888888888888888888888888888888888888
Q ss_pred HHHHcCChHHHHHHHHHhhccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
...++|++++|+-+|.+|++++|.+-
T Consensus 216 ls~~~~~i~qA~~cy~rAI~~~p~n~ 241 (895)
T KOG2076|consen 216 LSEQLGNINQARYCYSRAIQANPSNW 241 (895)
T ss_pred HHHhcccHHHHHHHHHHHHhcCCcch
Confidence 88888888888888888888888764
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.9e-10 Score=99.71 Aligned_cols=166 Identities=19% Similarity=0.245 Sum_probs=110.9
Q ss_pred CCCccHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCCCCeeeCCCCCeEEecCCCccc------
Q 018348 1 MPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKN------ 71 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~-~~~H~dlk~~Nill~~~~~~kl~dfg~~~~------ 71 (357)
|.-|+|..+|.+.+ ...+....-.+++.||+.||.|||+-. +++|+++..+.|++..+|.+|+.--.-...
T Consensus 154 mssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~ 233 (458)
T KOG1266|consen 154 MSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNS 233 (458)
T ss_pred ccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhh
Confidence 56789999996442 356777777889999999999999875 589999999999999999888753211000
Q ss_pred cCCC--CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHH
Q 018348 72 SRDG--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 72 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
.... ....+-++|.+||.-.....+..+|||+||...++|--+..-+.........+.......-. +.. .
T Consensus 234 ~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~-len-------~ 305 (458)
T KOG1266|consen 234 TREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG-LEN-------G 305 (458)
T ss_pred hhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee-ccC-------c
Confidence 0000 11234578999998766677889999999999999987764322211111111111111100 000 1
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.-..++..|++..|..||+++.++-
T Consensus 306 lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 306 LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred cccCcCcccccCCCCCCcchhhhhc
Confidence 1245788999999999999998764
|
|
| >PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.9e-10 Score=100.45 Aligned_cols=106 Identities=13% Similarity=-0.002 Sum_probs=93.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.++..|...|..+.+.|++++|+..|++|++++|+ +..+...++.++...|+++++.+.+....+..|.++..|..+|.
T Consensus 144 ~~~~~~~~~a~~~~~~G~~~~A~~~~~~al~~~P~-~~~~~~~l~~~li~~~~~~~~~~~l~~~~~~~~~~~~~~~~la~ 222 (280)
T PF13429_consen 144 DSARFWLALAEIYEQLGDPDKALRDYRKALELDPD-DPDARNALAWLLIDMGDYDEAREALKRLLKAAPDDPDLWDALAA 222 (280)
T ss_dssp T-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-TT--HHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-HTSCCHCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 56677889999999999999999999999999999 89999999999999999999888888888888999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
++..+|++++|+.+|+++++.+|+|..
T Consensus 223 ~~~~lg~~~~Al~~~~~~~~~~p~d~~ 249 (280)
T PF13429_consen 223 AYLQLGRYEEALEYLEKALKLNPDDPL 249 (280)
T ss_dssp HHHHHT-HHHHHHHHHHHHHHSTT-HH
T ss_pred Hhccccccccccccccccccccccccc
Confidence 999999999999999999999998864
|
|
| >PRK11447 cellulose synthase subunit BcsC; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.2e-09 Score=115.26 Aligned_cols=109 Identities=11% Similarity=0.012 Sum_probs=97.0
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchH--------------HHhhHHHHHHhcCChHHHHHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT--------------VYARRSLCYLMSDMPQDALNDAMQAQ 310 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~--------------~~~~~a~~~~~~~~~~~A~~~~~~al 310 (357)
.+.+..+...|..+++.|++++|+..|+++++++|+ +.. .....|.++...|++++|+..|++++
T Consensus 300 P~~~~a~~~Lg~~~~~~g~~~eA~~~l~~Al~~~p~-~~~~~~~~~ll~~~~~~~~~~~g~~~~~~g~~~eA~~~~~~Al 378 (1157)
T PRK11447 300 PKDSEALGALGQAYSQQGDRARAVAQFEKALALDPH-SSNRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERLYQQAR 378 (1157)
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ccchhHHHHHHHhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 356788899999999999999999999999999998 432 12345788889999999999999999
Q ss_pred HhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 311 IISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 311 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+++|++..+++.+|.++..+|++++|++.|+++++++|++..++
T Consensus 379 ~~~P~~~~a~~~Lg~~~~~~g~~~eA~~~y~~aL~~~p~~~~a~ 422 (1157)
T PRK11447 379 QVDNTDSYAVLGLGDVAMARKDYAAAERYYQQALRMDPGNTNAV 422 (1157)
T ss_pred HhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999987654
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.5e-09 Score=95.98 Aligned_cols=166 Identities=22% Similarity=0.281 Sum_probs=114.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---CccCCCCCCchhhhc-
Q 018348 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFTPPEYLR- 91 (357)
Q Consensus 16 ~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~~~gt~~y~aPE~~~- 91 (357)
....|...+++++.++.+.+-||..| .+-||++++|+|+++++.|.+.|=........+. ..+|...|++||.-.
T Consensus 112 P~~~w~fllrvaRnlA~aFA~lH~~G-h~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~ 190 (637)
T COG4248 112 PHCAWDFLLRVARNLASAFATLHEHG-HVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTL 190 (637)
T ss_pred CccccHHHHHHHHHHHHHHHHHHhcC-CcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhcc
Confidence 34789999999999999999999999 8889999999999999999998744322222222 346788999999765
Q ss_pred ----CCCCCCcccchhHHHHHHHHHcC-CCCCCcch--------hH-Hhhhcccccccccc-----ccCCC-CchhHHHH
Q 018348 92 ----TGRVTPESVIYSFGTLLLDLLSG-KHIPPSHA--------LD-LIRDRNLQMLTDSC-----LEGQF-TDDDGTEL 151 (357)
Q Consensus 92 ----~~~~~~~~Di~slG~vl~el~~g-~~~~~~~~--------~~-~~~~~~~~~~~~~~-----~~~~~-~~~~~~~l 151 (357)
+..-+..+|.|.||+++++++.| +.||.+-. .+ .+..+.+....+.. .+... ..-.++.+
T Consensus 191 ~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~v 270 (637)
T COG4248 191 PSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDV 270 (637)
T ss_pred ccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHH
Confidence 22457789999999999999877 66654311 00 11111111111100 00111 12246789
Q ss_pred HHHHHHhhhcC--CCCCCChhhHHHHhcccccC
Q 018348 152 VRLASRCLQYE--PRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 152 ~~li~~cl~~~--p~~Rps~~~i~~~L~~~~~~ 182 (357)
+.+..+|+... +.-|||++..+..|..+..+
T Consensus 271 qAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 271 QALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred HHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 99999999763 56899999888777665543
|
|
| >PLN03098 LPA1 LOW PSII ACCUMULATION1; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1e-09 Score=100.01 Aligned_cols=70 Identities=13% Similarity=0.162 Sum_probs=65.8
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchH---HHhhHHHHHHhcCChHHHHHHHHHHHHhC
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQAQIIS 313 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~---~~~~~a~~~~~~~~~~~A~~~~~~al~l~ 313 (357)
...+.+++++++|.+++..|+|++|+..|++||+++|+ +.. +|+|+|.||..+|++++|+.++++|+++.
T Consensus 70 ~dP~~a~a~~NLG~AL~~lGryeEAIa~f~rALeL~Pd-~aeA~~A~yNLAcaya~LGr~dEAla~LrrALels 142 (453)
T PLN03098 70 ADVKTAEDAVNLGLSLFSKGRVKDALAQFETALELNPN-PDEAQAAYYNKACCHAYREEGKKAADCLRTALRDY 142 (453)
T ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999999999999 664 49999999999999999999999999984
|
|
| >COG4785 NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.8e-10 Score=89.64 Aligned_cols=106 Identities=13% Similarity=-0.019 Sum_probs=101.3
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
.+.+.-++++|..|=..|-+.-|...|++++.+.|+ -+++++.+|..+...|+|+.|.+.|+..+++||.+--|+.|+|
T Consensus 62 eeRA~l~fERGvlYDSlGL~~LAR~DftQaLai~P~-m~~vfNyLG~Yl~~a~~fdaa~eaFds~~ELDp~y~Ya~lNRg 140 (297)
T COG4785 62 EERAQLLFERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 140 (297)
T ss_pred HHHHHHHHHhcchhhhhhHHHHHhhhhhhhhhcCCC-cHHHHHHHHHHHHhcccchHHHHHhhhHhccCCcchHHHhccc
Confidence 345677899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhccccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
.+++.-|+|.-|.+++.+-..-||+++
T Consensus 141 i~~YY~gR~~LAq~d~~~fYQ~D~~DP 167 (297)
T COG4785 141 IALYYGGRYKLAQDDLLAFYQDDPNDP 167 (297)
T ss_pred eeeeecCchHhhHHHHHHHHhcCCCCh
Confidence 999999999999999999999999886
|
|
| >PRK11447 cellulose synthase subunit BcsC; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.1e-09 Score=112.14 Aligned_cols=107 Identities=16% Similarity=0.107 Sum_probs=94.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHH-----------------------------------
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRS----------------------------------- 290 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a----------------------------------- 290 (357)
..+..+...|..+...|++++|+..|+++++++|+ +..++..++
T Consensus 383 ~~~~a~~~Lg~~~~~~g~~~eA~~~y~~aL~~~p~-~~~a~~~L~~l~~~~~~~~A~~~l~~l~~~~~~~~~~~~~~l~~ 461 (1157)
T PRK11447 383 TDSYAVLGLGDVAMARKDYAAAERYYQQALRMDPG-NTNAVRGLANLYRQQSPEKALAFIASLSASQRRSIDDIERSLQN 461 (1157)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhcCHHHHHHHHHhCCHHHHHHHHHHHHHhhh
Confidence 45677888999999999999999999999999999 666554444
Q ss_pred -------HHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 291 -------LCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 291 -------~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
.++...|++++|++.|+++++++|+++.+++.+|.+|..+|++++|+..|+++++++|++..+
T Consensus 462 ~~~~~~a~~~~~~g~~~eA~~~~~~Al~~~P~~~~~~~~LA~~~~~~G~~~~A~~~l~~al~~~P~~~~~ 531 (1157)
T PRK11447 462 DRLAQQAEALENQGKWAQAAELQRQRLALDPGSVWLTYRLAQDLRQAGQRSQADALMRRLAQQKPNDPEQ 531 (1157)
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Confidence 344567999999999999999999999999999999999999999999999999999988754
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.7e-09 Score=89.97 Aligned_cols=104 Identities=14% Similarity=0.069 Sum_probs=92.4
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchH---HHhhHHHHHHhc--------CChHHHHHHHHHHHHhCCC
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMS--------DMPQDALNDAMQAQIISPI 315 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~---~~~~~a~~~~~~--------~~~~~A~~~~~~al~l~p~ 315 (357)
....++..|..++..|++++|+..|+++++..|+ ++. +++++|.++... |++++|++.++++++.+|+
T Consensus 69 ~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~ 147 (235)
T TIGR03302 69 AEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPN-HPDADYAYYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPN 147 (235)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCchHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCC
Confidence 3467899999999999999999999999999998 554 688899999986 8899999999999999999
Q ss_pred chHHH-----------------HHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 316 WHIAS-----------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 316 ~~~a~-----------------~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
+..++ +.+|.+++..|++++|+..|+++++..|++.
T Consensus 148 ~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~ 200 (235)
T TIGR03302 148 SEYAPDAKKRMDYLRNRLAGKELYVARFYLKRGAYVAAINRFETVVENYPDTP 200 (235)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHCCCCc
Confidence 86543 4678899999999999999999999988754
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 357 | ||||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 4e-14 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 4e-14 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 8e-12 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-11 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 8e-11 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 8e-11 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 1e-10 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 4e-09 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 4e-07 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 5e-07 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 5e-07 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 2e-06 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-06 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 2e-06 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-06 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 3e-06 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 4e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 4e-06 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 4e-06 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 5e-06 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 5e-06 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 5e-06 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 5e-06 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 6e-06 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 6e-06 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 7e-06 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 1e-05 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 1e-05 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 1e-05 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 1e-05 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-05 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 2e-05 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 2e-05 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 2e-05 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-05 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 2e-05 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-05 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-05 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 2e-05 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-05 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-05 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-05 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-05 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 2e-05 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 2e-05 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-05 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 2e-05 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-05 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-05 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-05 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-05 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-05 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 2e-05 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 2e-05 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-05 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-05 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-05 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 3e-05 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 3e-05 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 3e-05 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 3e-05 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 3e-05 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-05 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 3e-05 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 3e-05 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 3e-05 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-05 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 4e-05 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 4e-05 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 4e-05 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 4e-05 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 4e-05 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 4e-05 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 4e-05 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 4e-05 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 4e-05 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 4e-05 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 4e-05 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 4e-05 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 4e-05 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 4e-05 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 4e-05 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 4e-05 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 4e-05 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 5e-05 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 5e-05 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 5e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 5e-05 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 5e-05 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 5e-05 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 6e-05 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 6e-05 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 6e-05 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 6e-05 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 6e-05 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 6e-05 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 6e-05 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 6e-05 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 6e-05 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 6e-05 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 6e-05 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 6e-05 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 6e-05 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 7e-05 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 7e-05 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 7e-05 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 7e-05 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 7e-05 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 7e-05 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 7e-05 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 7e-05 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 7e-05 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 8e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 8e-05 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 8e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 8e-05 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 8e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 9e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 9e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 9e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 1e-04 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 1e-04 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 1e-04 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-04 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 1e-04 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 1e-04 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-04 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-04 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 1e-04 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 1e-04 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 1e-04 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 1e-04 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 1e-04 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 1e-04 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-04 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 2e-04 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 2e-04 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 2e-04 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-04 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 2e-04 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 2e-04 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-04 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 3e-04 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 3e-04 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 3e-04 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 3e-04 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 3e-04 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 3e-04 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-04 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 3e-04 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-04 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 3e-04 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 3e-04 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 3e-04 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 4e-04 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 4e-04 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 4e-04 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-04 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 4e-04 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 4e-04 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 4e-04 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 4e-04 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 4e-04 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 4e-04 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 4e-04 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-04 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 4e-04 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 4e-04 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 4e-04 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 5e-04 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 5e-04 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 5e-04 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 5e-04 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 6e-04 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 6e-04 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 6e-04 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 6e-04 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 7e-04 | ||
| 1elw_A | 118 | Crystal Structure Of The Tpr1 Domain Of Hop In Comp | 7e-04 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 7e-04 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-04 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-04 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 8e-04 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 8e-04 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 8e-04 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 8e-04 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 8e-04 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 8e-04 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 8e-04 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-04 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 8e-04 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 8e-04 | ||
| 3vhe_A | 359 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 9e-04 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 9e-04 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 9e-04 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 9e-04 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 9e-04 |
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1ELW|A Chain A, Crystal Structure Of The Tpr1 Domain Of Hop In Complex With A Hsc70 Peptide Length = 118 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-32
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 32/203 (15%)
Query: 1 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR------I 53
MPN +L L + T P+ W MR ++ A + + L+ + + +R I
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANI 164
Query: 54 LFDEDGNPRLSTFGLMK-NSRDGKSY-STNLAFTP----PEYLRTGRVTPESVIYSFGTL 107
L DE ++S FGL + + + ++ ++ + T PE L G +TP+S IYSFG +
Sbjct: 165 LLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVV 223
Query: 108 LLDLLSGK-----HIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157
LL++++G H P LD ++ ++ D + + +AS+
Sbjct: 224 LLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQ 282
Query: 158 CLQYEPRERPNPKSLVTALSPLQ 180
CL + +RP+ K + L +
Sbjct: 283 CLHEKKNKRPDIKKVQQLLQEMT 305
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 8e-32
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 22/198 (11%)
Query: 1 MPNETLAKHLF--HWETHPMKWAMRLRVVLHLAQALEY--CTSKGRALYHDLNAYRILFD 56
M N ++A L P+ W R R+ L A+ L Y + ++ D+ A IL D
Sbjct: 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168
Query: 57 EDGNPRLSTFGLMKNSRDGKSY-STNLAFT----PPEYLRTGRVTPESVIYSFGTLLLDL 111
E+ + FGL K ++ +T + T PEYL TG+ + ++ ++ +G +LL+L
Sbjct: 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 228
Query: 112 LSGK-----HIPP--------SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158
++G+ L++++ L+ L D L+G + D++ +L+++A C
Sbjct: 229 ITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLC 288
Query: 159 LQYEPRERPNPKSLVTAL 176
Q P ERP +V L
Sbjct: 289 TQSSPMERPKMSEVVRML 306
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 6e-29
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 1 MPNETLAKHLF--HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 58
M N L +HL+ T M W RL + + A+ L Y ++ D+ + IL DE+
Sbjct: 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHY-LHTRAIIHRDVKSINILLDEN 175
Query: 59 GNPRLSTFGLMK-NSRDGKSY-STNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLL 112
P+++ FG+ K + +++ ST + T PEY GR+T +S +YSFG +L ++L
Sbjct: 176 FVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 113 SGK----HIPPSH-------ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 161
+ P A++ + L+ + D L + + + A +CL
Sbjct: 236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLAL 295
Query: 162 EPRERPNPKSLVTAL 176
+RP+ ++ L
Sbjct: 296 SSEDRPSMGDVLWKL 310
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 3e-15
Identities = 39/199 (19%), Positives = 83/199 (41%), Gaps = 20/199 (10%)
Query: 1 MPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDED 58
+ +L + L + RL + +A+ + Y ++ + H +L + +L D+
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK 175
Query: 59 GNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSG 114
++ FGL + S + A TP PE LR +S +YSFG +L +L +
Sbjct: 176 YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL 235
Query: 115 K----HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169
+ ++ P+ + + + ++ + + ++ + C EP +RP+
Sbjct: 236 QQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP---------QVAAIIEGCWTNEPWKRPSF 286
Query: 170 KSLVTALSPLQKETEVPSH 188
+++ L PL K P +
Sbjct: 287 ATIMDLLRPLIKSAVPPPN 305
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 5e-15
Identities = 42/196 (21%), Positives = 79/196 (40%), Gaps = 21/196 (10%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
+L HL H + + + A+ ++Y +K + H DL + I ED
Sbjct: 101 CEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDN 157
Query: 60 NPRLSTFGL--MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESV---IYSFGTLLLD 110
++ FGL K+ G L+ + PE +R P S +Y+FG +L +
Sbjct: 158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217
Query: 111 LLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 166
L++G+ +I + + R S + + + RL + CL+ + ER
Sbjct: 218 LMTGQLPYSNINNRDQIIEMVGRGSLSPDLS----KVRSNCPKRMKRLMAECLKKKRDER 273
Query: 167 PNPKSLVTALSPLQKE 182
P+ ++ + L +E
Sbjct: 274 PSFPRILAEIEELARE 289
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 8e-15
Identities = 33/191 (17%), Positives = 69/191 (36%), Gaps = 19/191 (9%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
MP +L L + + ++ L +A+ + + + + LN+ ++ DED
Sbjct: 91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDM 150
Query: 60 NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV---IYSFGTLLLDLLSGK- 115
R+S + K S A+ PE L+ ++SF LL +L++ +
Sbjct: 151 TARISMADV-KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREV 209
Query: 116 ---HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 171
+ + L+ + + +L C+ +P +RP
Sbjct: 210 PFADLSNMEIGMKVALEGLRPTIPPGISP---------HVSKLMKICMNEDPAKRPKFDM 260
Query: 172 LVTALSPLQKE 182
+V L +Q +
Sbjct: 261 IVPILEKMQDK 271
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 1e-14
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQD 301
M++ K+KG+ A ++ DA++CY++ I + P +Y+ RS Y Q
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHNHVLYSNRSAAYAKKGDYQK 56
Query: 302 ALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354
A D + + P W +AAAL + EA+ +EG E N
Sbjct: 57 AYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE-ANNPQL 108
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 3e-14
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K +G+ A +K+ AI+ YTQ + +P + R+ Y S + A DA A +
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATV 73
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 357
+ P + A A M A+ A ++G E S A ++
Sbjct: 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKR 119
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 2e-13
Identities = 33/222 (14%), Positives = 66/222 (29%), Gaps = 40/222 (18%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY--------H-DLNAY 51
+L+ L + + W + +A+ L Y L H D+ +
Sbjct: 104 HEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSK 160
Query: 52 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT------PPEYLRTGRVTPESV----- 100
+L + ++ FGL GKS PE L
Sbjct: 161 NVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRID 220
Query: 101 IYSFGTLLLDLLSGK----------------HIPPSHALDLIRDRNLQMLTDSCLEGQFT 144
+Y+ G +L +L S I +L+ +++ + L +
Sbjct: 221 MYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQ 280
Query: 145 DDDGT-ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185
G L C ++ R + + ++ +Q+ T +
Sbjct: 281 KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTNI 322
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 4e-13
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K KG+ F++ D A++ YT+ I +Y+ R+ CY Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQ 78
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 357
+ P + +AAAL AM +A ++ L+ A
Sbjct: 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD-SSCKEAADG 123
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 5e-13
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTV---YARRSLCYLMSDMPQDALNDAMQ 308
K++G+ F + +A CY + I +P V Y R+LCYL P+ AL D +
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 68
Query: 309 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 357
A + A + M +EA L+ +L ++ G
Sbjct: 69 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 117
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 5e-13
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K KG+ F++ D A+ Y + + + +Y+ R+ C Q AL+D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIR 75
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354
+ + +AA L AM ++AQ A ++ ++ N A
Sbjct: 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD-PSNEEA 117
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 6e-13
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K++G+ F + +A CY + I + Y R+LCYL P+ AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 357
+ A + M +EA L+ +L ++ G
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 112
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 8e-13
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDA 302
++ K + + F+ KD ++AI+ Y+Q I+ + Y RSL YL ++ A
Sbjct: 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL-NPSNAIYYGNRSLAYLRTECYGYA 66
Query: 303 LNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 347
L DA +A + + Y +AA+ A+G A + ++
Sbjct: 67 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 3e-12
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFI--DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA 309
+K+G+ F+ D A+ YTQ + DA ++ R+ C+L + A +A +A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 310 QIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354
A Y ++ AL +G ++A + L+ +LE KN
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE-PKNKVF 135
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 66.2 bits (161), Expect = 3e-12
Identities = 27/168 (16%), Positives = 46/168 (27%), Gaps = 15/168 (8%)
Query: 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGL-MK 70
+ L + SKG L H N + DG L K
Sbjct: 189 GDEGILALHILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWK 243
Query: 71 NSRDGKSYSTNLAFTPPEYL--RTGRVTPESVIYSFGTLLLDLLSGK---HIPPSHALDL 125
G + S + + P E+L T T + G + + +
Sbjct: 244 VGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS 303
Query: 126 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
+ +L++ L + L R L ++ R R P +
Sbjct: 304 WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 7e-12
Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 32/198 (16%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
+P L L + HP+KW+++LR++L +A +EY ++ + H DL + I
Sbjct: 103 VPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD 161
Query: 60 NPRLST-----FGLMKNSRDGKSYSTNLAFTP----PEYL--RTGRVTPESVIYSFGTLL 108
FGL S+ + L PE + T ++ YSF +L
Sbjct: 162 ENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 109 LDLLSGK----HIPPSHA--LDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQY 161
+L+G+ +++IR+ L+ + + C L + C
Sbjct: 219 YTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP---------RLRNVIELCWSG 269
Query: 162 EPRERPNPKSLVTALSPL 179
+P++RP+ +V LS L
Sbjct: 270 DPKKRPHFSYIVKELSEL 287
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-11
Identities = 36/211 (17%), Positives = 67/211 (31%), Gaps = 35/211 (16%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
TL + + ++ + + + Y +KG + H DL + + +D +G
Sbjct: 111 CKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYD-NG 166
Query: 60 NPRLSTFGL--MKNSRDGKSYSTNLAFTP-------PEYLRTGRVTPESV---------I 101
++ FGL + L PE +R E +
Sbjct: 167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDV 226
Query: 102 YSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157
++ GT+ +L + + P + + L+ G E+ +
Sbjct: 227 FALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQI--------GMGKEISDILLF 278
Query: 158 CLQYEPRERPNPKSLVTALSPLQKETEVPSH 188
C +E ERP L+ L L K SH
Sbjct: 279 CWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-11
Identities = 35/196 (17%), Positives = 76/196 (38%), Gaps = 26/196 (13%)
Query: 1 MPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYC-TSKGRALYH-DLNAYRILFDE 57
+L L E P A + L +Q + Y + + +AL H DL +L
Sbjct: 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA 140
Query: 58 DGN-PRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLL 112
G ++ FG + D +++ TN + PE + + ++S+G +L +++
Sbjct: 141 GGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 197
Query: 113 SGK------HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 166
+ + P + + + L + + + L +RC +P +R
Sbjct: 198 TRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK---------PIESLMTRCWSKDPSQR 248
Query: 167 PNPKSLVTALSPLQKE 182
P+ + +V ++ L +
Sbjct: 249 PSMEEIVKIMTHLMRY 264
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 1e-11
Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQ 308
K +G+ + ++ + A+ Y + I+ ++P + R+ Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 309 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE-----AKKN 351
A I P + A ALS++ EA K+ L+ K N
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSN 119
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 2e-11
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
+ +G F + D +A++ YT+ I Y+ R+ +A+ D +A
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIE 66
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 357
P + A +A A A+ A L T +A+ N+ + +
Sbjct: 67 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR 112
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 63.2 bits (153), Expect = 3e-11
Identities = 35/226 (15%), Positives = 63/226 (27%), Gaps = 45/226 (19%)
Query: 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLM 69
+ RL++ L + + L G L H L + I+ D+ G L+ F +
Sbjct: 204 THKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHL 258
Query: 70 KNSRDGKSYSTNLAFTPPEYL----------RTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
F PPE +T ++ G + + P
Sbjct: 259 VRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LP 316
Query: 120 SHALDLIRDRNLQMLTDSCLEGQFTDDDGT--ELVRLASRCLQYEPRERPNP-------- 169
+ + E F + L L+Y +R P
Sbjct: 317 NTDDAALGG----------SEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE 366
Query: 170 ----KSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSR 211
++ ++A PL + P+ P S + EA +
Sbjct: 367 YEQLRTELSAALPLYQTDGEPTREGGAPPSGTSQPDEAGAAEAVTA 412
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 62.3 bits (151), Expect = 5e-11
Identities = 32/185 (17%), Positives = 57/185 (30%), Gaps = 34/185 (18%)
Query: 4 ETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDE 57
+T + L + RL++ L + + L G L H L + I+ D+
Sbjct: 187 QTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQ 241
Query: 58 DGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYL-----------RTGRVTPESVIYSFGT 106
G L+ F + S + F PPE R +T ++ G
Sbjct: 242 RGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301
Query: 107 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR-LASRCLQYEPRE 165
++ + P I ++ + + VR L L+Y +
Sbjct: 302 VIYWIWCAD--LP------ITKDAALGGSEWIFRS---CKNIPQPVRALLEGFLRYPKED 350
Query: 166 RPNPK 170
R P
Sbjct: 351 RLLPL 355
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 2e-10
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K + + F+ KD ++AI+ Y+Q I+ + Y RSL YL ++ AL DA +A
Sbjct: 10 KTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIE 68
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALK 341
+ + Y +AA+ A+G A +
Sbjct: 69 LDKKYIKGYYRRAASNMALGKFRAALRDYE 98
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 36/209 (17%), Positives = 67/209 (32%), Gaps = 37/209 (17%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
+ TL + W+ R+ +A + Y S + H DLN++ L E+
Sbjct: 89 IKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENK 145
Query: 60 NPRLSTFGL--------------MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVI 101
N ++ FGL + + + P PE + + +
Sbjct: 146 NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDV 205
Query: 102 YSFGTLLLDLLSGKHIPP-----SHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLA 155
+SFG +L +++ + P + L L +C +
Sbjct: 206 FSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP---------SFFPIT 256
Query: 156 SRCLQYEPRERPNPKSLVTALSPLQKETE 184
RC +P +RP+ L L L+
Sbjct: 257 VRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 4e-10
Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 304
M + K++G+ F+Q ++A+ CY Q I A +P Y+ +++ + A+
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQ 59
Query: 305 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 343
Q + +++ + + A +++
Sbjct: 60 MCQQGLRYTSTAEHV-AIRSKLQYRLELAQGAVGSVQIP 97
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 1e-09
Identities = 34/196 (17%), Positives = 71/196 (36%), Gaps = 35/196 (17%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA--LYHDLNAYRILFDED 58
L + L + + + + +A+ + Y + ++ DL + IL +
Sbjct: 88 ARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQK 144
Query: 59 GNPRLST--------FGLMKNSRD-GKSYSTNLAFTP----PEYLRTGRVTPESVIYSFG 105
+ FGL +R+ ++ + A PE +R + S ++S+G
Sbjct: 145 VENGDLSNKILKITDFGL---AREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYG 201
Query: 106 TLLLDLLSGK----HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQ 160
LL +LL+G+ I + L + + +C E +L C
Sbjct: 202 VLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPE---------PFAKLMEDCWN 252
Query: 161 YEPRERPNPKSLVTAL 176
+P RP+ +++ L
Sbjct: 253 PDPHSRPSFTNILDQL 268
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 1e-08
Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 20/156 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-SRDGKSYSTNL 82
+ AL + S+G ++ D+ I G +L FGL+ G
Sbjct: 160 WGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV--- 215
Query: 83 AF--TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136
P PE L+ + ++S G +L++ P Q L
Sbjct: 216 -QEGDPRYMAPELLQGSY-GTAADVFSLGLTILEVACNME-LPHGG------EGWQQLRQ 266
Query: 137 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
L +FT +EL + L+ +P+ R ++L
Sbjct: 267 GYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEAL 302
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 2e-08
Identities = 38/242 (15%), Positives = 65/242 (26%), Gaps = 50/242 (20%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY-------CTSKGRALYH-DLNAYR 52
PN +L K+L H W R+ + + L Y A+ H DLN+
Sbjct: 94 YPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRN 150
Query: 53 ILFDEDGNPRLSTFGL--------MKNSRDGKSYSTNLAFTP----PEYLR-------TG 93
+L DG +S FGL + + + + + T PE L
Sbjct: 151 VLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXE 210
Query: 94 RVTPESVIYSFGTLLLDLLSGKHI-----------PPSHALDLIRDRNLQMLTDSCLEGQ 142
+ +Y+ G + ++ M E Q
Sbjct: 211 SALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ 270
Query: 143 -------FTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGI 193
+ ++ L C + R + ++ L E V
Sbjct: 271 RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTA 330
Query: 194 PH 195
H
Sbjct: 331 HH 332
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 3e-08
Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP--TVYARRSLCYLMSDMPQDALNDAMQA 309
K KG+ FR K DAI+ Y ++ + Y+ S CY+ + + + +A
Sbjct: 10 KDKGNQFFRNKKYDDAIKYYNWALE----LKEDPVFYSNLSACYVSVGDLKKVVEMSTKA 65
Query: 310 QIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354
+ P + +A+A +G +A L + +++
Sbjct: 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASI 110
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 4e-08
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFT 85
+ A++YC K + H DL A +L D D N +++ FG G +
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 86 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + G+ PE ++S G +L L+SG +P +NL+ L + L G++
Sbjct: 181 APELFQ-GKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKY 231
Query: 144 TDDDG--TELVRLASRCLQYEPRERP 167
T+ L R L P +R
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRG 257
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 7e-08
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K G+ A++QKD + A Y + I+ + T Y ++ Y + + +A
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVE 70
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKE 342
+ L A A+S G + Q L
Sbjct: 71 VGRETRADYKLIAKAMSRAGNAFQKQNDLSL 101
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 8e-08
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH----DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 79
LRV+ L AL+ C + + DL + D N +L FGL + S++
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 80 TNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 135
TP PE + +S I+S G LL +L + PP A + + L
Sbjct: 174 KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PPFTA------FSQKELA 225
Query: 136 DSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNPKSL 172
EG+F EL + +R L + RP+ + +
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 1e-07
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Query: 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL 303
+ E + + AF D AI + ++ + R+ C++ P+ A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 304 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 342
+D A + A Y + +G + ++E
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRE 236
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
+ G L DA+ + +D + Y RR+ +L + AL D +
Sbjct: 30 LELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQ 88
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKE 342
+ + A + L G +EA+ K+
Sbjct: 89 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKK 119
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Query: 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQ 300
Q+++ + + R DA Y + + + R C+ + P
Sbjct: 253 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPV 312
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 342
+A+ + + P A +A A M +EA +
Sbjct: 313 EAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYET 354
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 33/188 (17%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF---- 84
+ +AL Y S+G + H DL I DE N ++ FGL KN +
Sbjct: 125 ILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 85 ----------TP----PEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR 129
T E L TG + +YS G + +++ P S ++ +
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNIL 238
Query: 130 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS----PLQKETEV 185
F D+ ++ + ++P +RP ++L L+ P++ + EV
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTL---LNSGWLPVKHQDEV 295
Query: 186 PSHVLMGI 193
L +
Sbjct: 296 IKEALKSL 303
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 16/156 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 83
L + + AL++ + + L+ D+ + I +DG +L FG+ + +
Sbjct: 128 LDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI 186
Query: 84 FTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
TP PE +S I++ G +L +L + K A +++ L +
Sbjct: 187 GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK--HAFEA------GSMKNLVLKII 238
Query: 140 EGQFTDDDGT---ELVRLASRCLQYEPRERPNPKSL 172
G F +L L S+ + PR+RP+ S+
Sbjct: 239 SGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-07
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 1/91 (1%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K+ G+ A+++KD A++ Y + + + T ++ Y +A
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKE 342
+ A A + +G + K+
Sbjct: 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 3e-07
Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 30/164 (18%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPR--LSTFGLMKNSRDGKSY 78
++ L + S + H DL + IL + G + +S FGL K G+
Sbjct: 122 TLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
Query: 79 STNLAF---TP----PEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHAL 123
+ + T PE L T I+S G + ++S P A
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239
Query: 124 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167
L+ +L L + L + + +P++RP
Sbjct: 240 ILLGACSLDCLHPE-------KHEDVIARELIEKMIAMDPQKRP 276
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 3e-07
Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 15/142 (10%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTP 86
LA AL YC + + H D+ +L G +++ FG ++ + + L + P
Sbjct: 123 LADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLP 180
Query: 87 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-- 144
PE + + ++ G L + L G PP + +
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGM--PPFD------SPSHTETHRRIVNVDLKFP 232
Query: 145 DDDGTELVRLASRCLQYEPRER 166
L S+ L+Y P +R
Sbjct: 233 PFLSDGSKDLISKLLRYHPPQR 254
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 3e-07
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Query: 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL 303
+ E + + AF D AI + ++ + R+ C++ P+ A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 304 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 342
+D A + A Y + +G + ++E
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRE 213
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 4e-05
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQ 308
+ G L DA+ + +D P Y RR+ +L + AL D +
Sbjct: 7 LELGKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTK 62
Query: 309 AQIISPIWHIASYLQAAALSAMGMENEAQVALKE 342
+ + A + L G +EA+ K+
Sbjct: 63 VIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKK 96
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 6e-05
Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQ 300
Q+++ + + R DA Y + + + R C+ + P
Sbjct: 230 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPV 289
Query: 301 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 336
+A+ + + P A +A A M +EA
Sbjct: 290 EAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEA 325
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 7e-07
Identities = 41/188 (21%), Positives = 70/188 (37%), Gaps = 34/188 (18%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 82
L + L +A+A+E+ SKG L H DL I F D ++ FGL+ + T L
Sbjct: 121 LHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 83 AFTPPEYLRTGRV-TP---------------ESVIYSFGTLLLDLLSGKHIPPSHALDLI 126
P TG+V T + I+S G +L +LL P S ++ +
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERV 234
Query: 127 RDRNLQMLTDSCLEGQFTDDDGT---ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183
R +F + L P ERP +++ + + ++
Sbjct: 235 R------TLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE--NAVFEDL 286
Query: 184 EVPSHVLM 191
+ P ++
Sbjct: 287 DFPGKTVL 294
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 8e-07
Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 15/142 (10%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTP 86
LA AL YC SK + H D+ +L G +++ FG ++ + L + P
Sbjct: 118 LANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 175
Query: 87 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-- 144
PE + + ++S G L + L GK PP Q +FT
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PP------FEANTYQETYKRISRVEFTFP 227
Query: 145 DDDGTELVRLASRCLQYEPRER 166
D L SR L++ P +R
Sbjct: 228 DFVTEGARDLISRLLKHNPSQR 249
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 1e-06
Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 42/223 (18%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALYH-DLNAYRI 53
N +L +L ++ + L++ L + T A+ H DL + I
Sbjct: 117 HENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI 173
Query: 54 LFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESV----- 100
L ++G ++ GL + ++ + T PE L +
Sbjct: 174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLNRNHFQSYIM 232
Query: 101 --IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEGQ-------- 142
+YSFG +L ++ P H L M C++
Sbjct: 233 ADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRW 292
Query: 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185
+D+ ++ +L + C + P R + L+ + + ++
Sbjct: 293 SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 2e-06
Identities = 24/167 (14%), Positives = 46/167 (27%), Gaps = 33/167 (19%)
Query: 19 KWAMRLRVVLHLAQALEYCTSKGRALYHD--LNAYRIL--FDEDGNPRLSTFGL------ 68
K + + + H ++ Y I FD D
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478
Query: 69 --MKNSRDGKSYS------TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL-LSGKHIPP 119
+KN + + + F + T + S L L +I
Sbjct: 479 HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS--TAWNASGSILNTLQQLKFYKPYICD 536
Query: 120 SHALD--LIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 162
+ L+ L + ++ + ++TD L+R+A L E
Sbjct: 537 NDPKYERLVNAILDFLPKIEENLICSKYTD-----LLRIA---LMAE 575
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 3e-06
Identities = 30/180 (16%), Positives = 61/180 (33%), Gaps = 18/180 (10%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD-ED 58
M + TL +L MK + + + L++ ++ + H DL I
Sbjct: 111 MTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT 168
Query: 59 GNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH 116
G+ ++ GL R + + F PE +Y+FG +L++ + ++
Sbjct: 169 GSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSEY 227
Query: 117 ----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
+ + +T F E+ + C++ ER + K L
Sbjct: 228 PYSECQNAAQIYRR-------VTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 3e-06
Identities = 37/168 (22%), Positives = 59/168 (35%), Gaps = 30/168 (17%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 80
L + + +A+A+E+ SKG ++ DL N I F D ++ FGL+ + T
Sbjct: 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSN---IFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 81 NLAFTPPEYLRTGRV-TP---------------ESVIYSFGTLLLDLLSGKHIPPSHALD 124
L P TG+V T + I+S G +L +LL
Sbjct: 223 VLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI 282
Query: 125 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
+ RNL+ + + L P ERP +
Sbjct: 283 ITDVRNLKFPLLF-------TQKYPQEHMMVQDMLSPSPTERPEATDI 323
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 4e-06
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K +G+ F K+ +AI+ Y I+ P Y+ S CY+ + + + +A
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALK 341
I P A +A+A ++G +A L
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDAMFDLS 117
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 4e-06
Identities = 36/181 (19%), Positives = 68/181 (37%), Gaps = 25/181 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 82
+ + L ALE+ S+ + H D+ + G +L GL + + + +L
Sbjct: 139 WKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL 196
Query: 83 AFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 138
TP PE + +S I+S G LL ++ + + P + NL L
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYG----DKMNLYSLCKKI 250
Query: 139 LEGQF----TDDDGTELVRLASRCLQYEPRERPN-------PKSLVTALSPLQKETEVPS 187
+ + +D EL +L + C+ +P +RP+ K + + +
Sbjct: 251 EQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLEHHH-HH 309
Query: 188 H 188
H
Sbjct: 310 H 310
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 4e-06
Identities = 37/173 (21%), Positives = 61/173 (35%), Gaps = 41/173 (23%)
Query: 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD-EDGN 60
E ++ F + A+++C S+G + H D+ IL D G
Sbjct: 137 GEGPSRCFFG----------------QVVAAIQHCHSRG--VVHRDIKDENILIDLRRGC 178
Query: 61 PRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKH 116
+L FG D Y+ ++PPE++ + + ++S G LL D++ G
Sbjct: 179 AKLIDFGSGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDI 237
Query: 117 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERP 167
P I LE + + L RCL +P RP
Sbjct: 238 --PFERDQEI------------LEAELHFPAHVSPDCCALIRRCLAPKPSSRP 276
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 5e-06
Identities = 49/196 (25%), Positives = 76/196 (38%), Gaps = 24/196 (12%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
M +L L ++ + + +A + Y H DL A IL E+
Sbjct: 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENL 317
Query: 60 NPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
+++ FGL + D + + A +T PE GR T +S ++SFG LL +L +
Sbjct: 318 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 377
Query: 115 KHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+P LD + +R +M C E L L +C + EP ERP
Sbjct: 378 GRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEERPT 427
Query: 169 PKSLVTALSPLQKETE 184
+ L L TE
Sbjct: 428 FEYLQAFLEDYFTSTE 443
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 32/160 (20%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 80
R++ + + Y + H DL +L +D N R+ FGL + K
Sbjct: 130 RIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 187
Query: 81 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136
T PE L G + ++S G +L LLSG PP + N +
Sbjct: 188 -KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGC--PPFN------GANEYDILK 237
Query: 137 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 167
+G++T + +L+R + L Y P R
Sbjct: 238 KVEKGKYTFELPQWKKVSESAKDLIR---KMLTYVPSMRI 274
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 6e-06
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 21/148 (14%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNL--- 82
L LEY S+G + H D+ +L G ++S G+ + + T+
Sbjct: 118 LIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 83 AFTPPEYLRTGRV--TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 140
AF PPE + I+S G L ++ +G P N+ L ++ +
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG-LYP-------FEGDNIYKLFENIGK 227
Query: 141 GQFT--DDDGTELVRLASRCLQYEPRER 166
G + D G L L L+YEP +R
Sbjct: 228 GSYAIPGDCGPPLSDLLKGMLEYEPAKR 255
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 6e-06
Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 18/141 (12%)
Query: 222 EKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQ-------- 273
E + ++ + + + + +++Q + K++G+ F++ ++ +AI Y +
Sbjct: 15 ENLYFQGAKKSIYDYTDE---EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT 71
Query: 274 -------FIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326
+D + + + CY + A++ A + I A Y A
Sbjct: 72 EEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVA 131
Query: 327 LSAMGMENEAQVALKEGTTLE 347
G EA+ L + +L
Sbjct: 132 NMYFGFLEEAKENLYKAASLN 152
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 6e-06
Identities = 40/173 (23%), Positives = 65/173 (37%), Gaps = 41/173 (23%)
Query: 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDED-GN 60
E LA+ F + +A+ +C + G + H D+ IL D + G
Sbjct: 147 QEELARSFFW----------------QVLEAVRHCHNCG--VLHRDIKDENILIDLNRGE 188
Query: 61 PRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKH 116
+L FG +D Y+ ++PPE++R R + ++S G LL D++ G
Sbjct: 189 LKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 247
Query: 117 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERP 167
P + I + GQ +E L CL P +RP
Sbjct: 248 --PFEHDEEI------------IRGQVFFRQRVSSECQHLIRWCLALRPSDRP 286
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 8e-06
Identities = 49/196 (25%), Positives = 76/196 (38%), Gaps = 24/196 (12%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
M +L L ++ + + +A + Y H DL A IL E+
Sbjct: 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENL 400
Query: 60 NPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
+++ FGL + D + + A +T PE GR T +S ++SFG LL +L +
Sbjct: 401 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 460
Query: 115 KHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+P LD + +R +M C E L L +C + EP ERP
Sbjct: 461 GRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEERPT 510
Query: 169 PKSLVTALSPLQKETE 184
+ L L TE
Sbjct: 511 FEYLQAFLEDYFTSTE 526
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 8e-06
Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 32/160 (20%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 80
++ + + Y + H DL +L ++D ++ FGL + K
Sbjct: 140 VIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE 197
Query: 81 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136
T PE LR + + ++S G +L LL+G PP + Q +
Sbjct: 198 -RLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY--PP------FGGQTDQEILR 247
Query: 137 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 167
+G++T + +L++ + LQ++ + R
Sbjct: 248 KVEKGKYTFDSPEWKNVSEGAKDLIK---QMLQFDSQRRI 284
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 9e-06
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 17/151 (11%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTN---LAF 84
+ +Y + H DL + +ED ++ FGL K DG+ +
Sbjct: 124 IVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 181
Query: 85 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 144
PE L + E ++S G ++ LL GK PP L+ + +++
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFE------TSCLKETYLRIKKNEYS 233
Query: 145 --DDDGTELVRLASRCLQYEPRERPNPKSLV 173
L + LQ +P RP L+
Sbjct: 234 IPKHINPVAASLIQKMLQTDPTARPTINELL 264
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 32/160 (20%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 80
++ + + Y + H D+ IL + N ++ FGL
Sbjct: 150 NIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 81 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136
T PE L+ + + ++S G ++ LL G PP +N Q +
Sbjct: 208 -RLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGY--PPFGG------QNDQDIIK 257
Query: 137 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 167
+G++ D+ EL++ L Y+ +R
Sbjct: 258 KVEKGKYYFDFNDWKNISDEAKELIK---LMLTYDYNKRC 294
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 1e-05
Identities = 40/197 (20%), Positives = 81/197 (41%), Gaps = 24/197 (12%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
M L +L + + L + ++ A+EY K H +L A L E+
Sbjct: 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENH 355
Query: 60 NPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
+++ FGL + + A +T PE L + + +S +++FG LL ++ +
Sbjct: 356 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 415
Query: 115 KHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
P S +L+ +++ +M + C E ++ L C Q+ P +RP+
Sbjct: 416 GMSPYPGIDLSQVYELL-EKDYRMERPEGCPE---------KVYELMRACWQWNPSDRPS 465
Query: 169 PKSLVTALSPLQKETEV 185
+ A + +E+ +
Sbjct: 466 FAEIHQAFETMFQESSI 482
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 17/151 (11%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYST---NLAF 84
+ +Y + H DL + +ED ++ FGL K DG+ +
Sbjct: 150 IVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 207
Query: 85 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 144
PE L + E ++S G ++ LL GK PP L+ + +++
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFE------TSCLKETYLRIKKNEYS 259
Query: 145 --DDDGTELVRLASRCLQYEPRERPNPKSLV 173
L + LQ +P RP L+
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELL 290
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 1e-05
Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 40/165 (24%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 80
+++ L + + + H DL N IL D+D N +L+ FG G+
Sbjct: 128 KIMRALLEVICALHKLN--IVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 81 NLAFTP----PEYLRTGRV------TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 130
+ TP PE + E ++S G ++ LL+G PP R
Sbjct: 183 -VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRK 233
Query: 131 LQMLTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRER 166
++ + G + D +LV R L +P++R
Sbjct: 234 QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKR 275
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 18/154 (11%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 82
L + + + ++Y SK L + DL I + ++ FGL+ + ++ + +
Sbjct: 125 LELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK 182
Query: 83 AFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 138
T PE + + E +Y+ G +L +LL D
Sbjct: 183 G-TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD-TAFETSKFFTD---------L 231
Query: 139 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
+G +D + L + L +P +RPN +
Sbjct: 232 RDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEI 265
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 4/103 (3%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K +G+ ++ + +AIE Y + + T R+ + A++ A
Sbjct: 9 KAEGNKFYKARQFDEAIEHYNKAWELHK--DITYLNNRAAAEYEKGEYETAISTLNDAVE 66
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354
+ + + + +G LK+ T+E + S
Sbjct: 67 QGREMRADYKVISKSFARIGNAYHKLGDLKK--TIEYYQKSLT 107
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 8e-05
Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 16/108 (14%)
Query: 254 KGDVAFRQKDLKDAIECYTQFI-----DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQ 308
+G F + D +A++ YT+ I DA Y+ R+ +A+ D +
Sbjct: 145 EGKEYFTKSDWPNAVKAYTEMIKRAPEDA------RGYSNRAAALAKLMSFPEAIADCNK 198
Query: 309 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL-----EAKKN 351
A P + A +A A A+ A L T
Sbjct: 199 AIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSA 246
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 2e-05
Identities = 38/167 (22%), Positives = 64/167 (38%), Gaps = 22/167 (13%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA----- 83
L+ AL Y SK H D+ A +L + +L FGL + D Y +
Sbjct: 500 LSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSC 138
+ PE + R T S ++ FG + ++L P + + I + + +C
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 617
Query: 139 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185
L L ++C Y+P RP L LS + +E ++
Sbjct: 618 PP---------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 655
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-05
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 17/122 (13%)
Query: 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQ---FIDAGTMVSP--------------TV 285
D+++ ++KG+ F QKD K+AI+ Y +D + +
Sbjct: 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPL 65
Query: 286 YARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 345
YA S CYL +A + + A + +A A A +EA+ LK
Sbjct: 66 YANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125
Query: 346 LE 347
Sbjct: 126 NH 127
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 35/187 (18%), Positives = 61/187 (32%), Gaps = 36/187 (19%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 82
L++ +A+++ + + H DL +L G +L FG YS +
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198
Query: 83 AF------------TP----PEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHAL 123
TP PE + + + I++ G +L L +H P
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQH--PFEDG 256
Query: 124 DLIRDRNLQMLTDSCLEGQFT----DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+R + G+++ D T L LQ P ER + +V L +
Sbjct: 257 AKLR----------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306
Query: 180 QKETEVP 186
V
Sbjct: 307 AAARNVN 313
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 2e-05
Identities = 41/160 (25%), Positives = 56/160 (35%), Gaps = 32/160 (20%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 80
R++ + A+ YC + H DL LF D +L FGL + GK T
Sbjct: 110 RIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167
Query: 81 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136
TP P+ L G PE +S G ++ LL G PP +
Sbjct: 168 -KVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGY--PPFS------APTDSEVML 217
Query: 137 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 167
EG FT L+R R L P++R
Sbjct: 218 KIREGTFTFPEKDWLNVSPQAESLIR---RLLTKSPKQRI 254
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 24/196 (12%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
M +L L E + +A+ + + + H DL A IL
Sbjct: 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL 321
Query: 60 NPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
+++ FGL + D + + A +T PE + G T +S ++SFG LL+++++
Sbjct: 322 VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTY 381
Query: 115 KHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
IP + + +R +M ++C E EL + RC + P ERP
Sbjct: 382 GRIPYPGMSNPEVIRAL-ERGYRMPRPENCPE---------ELYNIMMRCWKNRPEERPT 431
Query: 169 PKSLVTALSPLQKETE 184
+ + + L TE
Sbjct: 432 FEYIQSVLDDFYTATE 447
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 26/195 (13%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
+ L E ++ L++V A +EY SK H DL A L E
Sbjct: 194 VQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVTEKN 250
Query: 60 NPRLSTFGLMKNSRDGKSYSTNLAF------TPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
++S FG+ + DG ++ T PE L GR + ES ++SFG LL + S
Sbjct: 251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
Query: 114 GKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167
P + + ++ ++ + C + + RL +C YEP +RP
Sbjct: 311 LGASPYPNLSNQQTREFV-EKGGRLPCPELCPD---------AVFRLMEQCWAYEPGQRP 360
Query: 168 NPKSLVTALSPLQKE 182
+ ++ L ++K
Sbjct: 361 SFSTIYQELQSIRKR 375
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 3e-05
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 16/155 (10%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V + QAL Y ++G ++ D+ + IL DG +LS FG +L T
Sbjct: 146 VCEAVLQALAYLHAQGV-IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGT 204
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 137
P PE + E I+S G ++++++ G+ P A+ +RD L +S
Sbjct: 205 PYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS 264
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
+ + L R L +P+ER + L
Sbjct: 265 ---HKVSP----VLRDFLERMLVRDPQERATAQEL 292
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 41/164 (25%), Positives = 61/164 (37%), Gaps = 34/164 (20%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILF-DEDGNP---RLSTFGLMKNSRDGK 76
V+ + + +EY ++G H DL N IL+ DE GNP R+ FG K R
Sbjct: 120 AVLFTITKTVEYLHAQGVV--HRDLKPSN---ILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 77 SYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 132
+T PE L I+S G LL +L+G P D +
Sbjct: 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG--YTPFANG---PDDTPE 229
Query: 133 MLTDSCLEGQFTDDDGT---------ELVRLASRCLQYEPRERP 167
+ G+F+ G +LV + L +P +R
Sbjct: 230 EILARIGSGKFSLSGGYWNSVSDTAKDLVS---KMLHVDPHQRL 270
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 43/193 (22%), Positives = 74/193 (38%), Gaps = 26/193 (13%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
M +L +L + L+ L + +A+EY H DL A +L ED
Sbjct: 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDN 326
Query: 60 NPRLSTFGLMKNSRDGKSYSTNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDLLS-G 114
++S FGL +++ S T PE LR + + +S ++SFG LL ++ S G
Sbjct: 327 VAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 383
Query: 115 KH----IPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169
+ IP + + ++ +M D C + + C + RP
Sbjct: 384 RVPYPRIPLKDVVPRV-EKGYKMDAPDGCPP---------AVYDVMKNCWHLDAATRPTF 433
Query: 170 KSLVTALSPLQKE 182
L L ++
Sbjct: 434 LQLREQLEHIRTH 446
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* Length = 148 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 4e-05
Identities = 13/111 (11%), Positives = 28/111 (25%), Gaps = 2/111 (1%)
Query: 233 ANELSFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSL 291
+ + M + +TL ++ +DA + +
Sbjct: 5 SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGA 63
Query: 292 CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 342
C A++ ++ + A L G EA+ L
Sbjct: 64 CRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFL 114
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-05
Identities = 12/107 (11%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 237 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM 295
+ M ++TL G ++ DA + + + C
Sbjct: 6 TLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQS 64
Query: 296 SDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 342
+ + AL ++ + A +G + A+
Sbjct: 65 LGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYS 111
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 31/159 (19%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 80
++ + AL Y S+ + H DL ILF ++ FGL + + + +
Sbjct: 128 ELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN 185
Query: 81 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136
T PE + VT + I+S G ++ LL+G P +L+ +
Sbjct: 186 AAG-TALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LPFT------GTSLEEVQQ 235
Query: 137 SCLEGQFT--------DDDGTELVRLASRCLQYEPRERP 167
+ +L++ + L +P RP
Sbjct: 236 KATYKEPNYAVECRPLTPQAVDLLK---QMLTKDPERRP 271
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 5e-05
Identities = 32/223 (14%), Positives = 67/223 (30%), Gaps = 42/223 (18%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALYH-DLNAYRI 53
+ +L +L + + +++ L A L + T A+ H DL + I
Sbjct: 122 HEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 178
Query: 54 LFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESV----- 100
L ++G ++ GL + + T PE L + +
Sbjct: 179 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSINMKHFESFKR 237
Query: 101 --IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEGQ-------- 142
IY+ G + ++ I P + L +M C +
Sbjct: 238 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW 297
Query: 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185
+ + + ++ C R + LS L ++ +
Sbjct: 298 QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 5e-05
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFT 85
+ A++YC + H DL +L D N +++ FGL DG+ T + +
Sbjct: 120 ILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 177
Query: 86 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + GR PE I+S G +L LL G +P D ++ L G F
Sbjct: 178 APEVIS-GRLYAGPEVDIWSCGVILYALLCG-TLP-------FDDEHVPTLFKKIRGGVF 228
Query: 144 T--DDDGTELVRLASRCLQYEPRER 166
+ + L LQ +P +R
Sbjct: 229 YIPEYLNRSVATLLMHMLQVDPLKR 253
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 6e-05
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V QALE+ S ++ D+ + IL DG+ +L+ FG +S + + T
Sbjct: 121 VCRECLQALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 179
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 137
P PE + P+ I+S G + ++++ G+ + P AL LI L +
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
+ + +RCL+ + +R + K L
Sbjct: 240 ---EKLSA----IFRDFLNRCLEMDVEKRGSAKEL 267
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 6e-05
Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 15/126 (11%)
Query: 237 SFQMWTDQMQETLNSKK-KGDVAFRQKDLKDAIECYTQ---FIDAGTMVSP--------- 283
S++M +++ E K +G V F++ K A+ Y + +++ + S
Sbjct: 135 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 194
Query: 284 --TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 341
+ ++C+L A+ +A + + A A+ A+ +
Sbjct: 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 254
Query: 342 EGTTLE 347
+ L
Sbjct: 255 KVLQLY 260
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 7e-05
Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 32/160 (20%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 80
R++ + + Y + H DL IL ++D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 81 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136
T PE LR G + ++S G +L LLSG PP + +N +
Sbjct: 183 -RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG--TPPFY------GKNEYDILK 232
Query: 137 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 167
G++ DD +L+R + L + P R
Sbjct: 233 RVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 8e-05
Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 17/145 (11%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTN---LAF 84
+ + Y S G + H DL +L + N +++ FGL + + + T +
Sbjct: 121 IITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNY 178
Query: 85 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 144
PE ES ++S G + LL G+ PP ++ + + +
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGR--PPFD------TDTVKNTLNKVVLADYE 230
Query: 145 --DDDGTELVRLASRCLQYEPRERP 167
E L + L+ P +R
Sbjct: 231 MPSFLSIEAKDLIHQLLRRNPADRL 255
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 9e-05
Identities = 36/163 (22%), Positives = 60/163 (36%), Gaps = 38/163 (23%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILF---DEDGNPRLSTFGLMKNSRDGKS 77
R++ + + Y + H DL N IL ++D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPEN---ILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 78 YSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 133
T PE LR G + ++S G +L LLSG PP + +N
Sbjct: 180 MKD-RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGT--PPFYG------KNEYD 229
Query: 134 LTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 167
+ G++ DD +L+R + L + P R
Sbjct: 230 ILKRVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 29/179 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSY-- 78
+R ++ +A +EY +S+ H DL A + ED ++ FGL SR Y
Sbjct: 140 VRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADFGL---SRKIYSGDYYR 194
Query: 79 -STNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRD 128
E L T S +++FG + ++++ G+ I + + +
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254
Query: 129 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPS 187
N C+E E+ L +C +P++RP+ L L + V S
Sbjct: 255 GNRLKQPPECME---------EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 39/165 (23%), Positives = 63/165 (38%), Gaps = 40/165 (24%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 80
++ L +A+ + + + H DL N IL D++ RLS FG + G+
Sbjct: 204 SIMRSLLEAVSFLHANN--IVHRDLKPEN---ILLDDNMQIRLSDFGFSCHLEPGEKLRE 258
Query: 81 NLAFTP----PEYLRTGRV------TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 130
L TP PE L+ E +++ G +L LL+G PP R
Sbjct: 259 -LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP------FWHRR 309
Query: 131 LQMLTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRER 166
++ +EGQ+ +L+ R LQ +P R
Sbjct: 310 QILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS---RLLQVDPEAR 351
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 37/192 (19%), Positives = 64/192 (33%), Gaps = 35/192 (18%)
Query: 7 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD--------- 56
+K++ K + ++ +A + + S + H DL IL
Sbjct: 101 SKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQ 158
Query: 57 ----EDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--------PEYLR-------TGRVTP 97
E+ +S FGL K G+S P PE L R+T
Sbjct: 159 QTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTR 218
Query: 98 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--LTDSCLEGQFTDDDGTELVRLA 155
I+S G + +LS P R+ N+ + ++ E L
Sbjct: 219 SIDIFSMGCVFYYILSKGKHPFGD--KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLI 276
Query: 156 SRCLQYEPRERP 167
S+ + ++P +RP
Sbjct: 277 SQMIDHDPLKRP 288
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 18/152 (11%)
Query: 25 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 81
+ + A+ LE+ ++ +Y DL IL DE G+ R+S GL + K ++
Sbjct: 293 DMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-- 349
Query: 82 LAFTP----PEYLRTGRVTPESVIY-SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136
T PE L+ G S + S G +L LL G P ++ +
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDR 404
Query: 137 SCLEGQ--FTDDDGTELVRLASRCLQYEPRER 166
L D EL L LQ + R
Sbjct: 405 MTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 19/142 (13%)
Query: 33 ALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPE 88
A+EYC + H DL +L D++ N +++ FGL DG T + + PE
Sbjct: 120 AIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 177
Query: 89 YLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-- 144
+ G+ PE ++S G +L +L G +P D + L +
Sbjct: 178 VIN-GKLYAGPEVDVWSCGIVLYVMLVG-RLP-------FDDEFIPNLFKKVNSCVYVMP 228
Query: 145 DDDGTELVRLASRCLQYEPRER 166
D L R + +P +R
Sbjct: 229 DFLSPGAQSLIRRMIVADPMQR 250
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 31/159 (19%)
Query: 25 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 81
R V + A+ LE + +Y DL IL D+ G+ R+S GL + +G++
Sbjct: 287 RAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG- 344
Query: 82 LAF--TPPEYLRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDR 129
T Y+ PE V + G LL ++++G+ P +
Sbjct: 345 --RVGT-VGYM-----APEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK--KKI 392
Query: 130 NLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRER 166
+ + E +++ + L S+ L +P ER
Sbjct: 393 KREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 16/146 (10%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 86
L AL+Y ++ ++ D+ IL DE G+ ++ F + +T +A T
Sbjct: 124 LVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT-MAGTKPYM 181
Query: 87 -PEYLRTGRVTPESVI---YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG- 141
PE + + S +S G +LL G+ P H + + + +
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR--RPYHIRS---STSSKEIVHTFETTV 236
Query: 142 -QFTDDDGTELVRLASRCLQYEPRER 166
+ E+V L + L+ P +R
Sbjct: 237 VTYPSAWSQEMVSLLKKLLEPNPDQR 262
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 22/166 (13%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA----- 83
L+ AL Y SK H D+ A +L + +L FGL + D Y +
Sbjct: 125 LSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSC 138
+ PE + R T S ++ FG + ++L P + + I + + +C
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 242
Query: 139 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L ++C Y+P RP L LS + +E +
Sbjct: 243 PP---------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A Length = 151 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 2e-04
Identities = 10/140 (7%), Positives = 39/140 (27%), Gaps = 4/140 (2%)
Query: 219 EILEKISYKDDEGVANELSFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDA 277
E IS + + + + + + ++ + + +++A +
Sbjct: 6 TENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY 65
Query: 278 GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQ 337
+ + Y + + Q A + A + + + + +A+
Sbjct: 66 DFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAK 124
Query: 338 VALKEGTTLEAKKNSTAGQK 357
+ ++ + K
Sbjct: 125 ECFEL--VIQHSNDEKLKIK 142
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 45/231 (19%), Positives = 83/231 (35%), Gaps = 32/231 (13%)
Query: 25 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 80
++ + +A++Y S A H D+ +L+ + +L+ FG K + S +T
Sbjct: 165 EIMKSIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 222
Query: 81 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136
+TP PE L + ++S G ++ LL G PP ++ +
Sbjct: 223 -PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNH--GLAISPGMKT 277
Query: 137 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERPNPKSLVTALS-P-LQKETEV 185
GQ+ ++ L+R L+ EP +R ++ P + + T+V
Sbjct: 278 RIRMGQYEFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTITE---FMNHPWIMQSTKV 331
Query: 186 PSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANEL 236
P L + L + E+I K E +N L
Sbjct: 332 PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPL 382
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 32/149 (21%)
Query: 33 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAF--TPPEY 89
AL+Y S+ +Y DL ++ D+DG+ +++ FGL K +DG + T F T PEY
Sbjct: 260 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEY 315
Query: 90 LRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
L PE + G ++ +++ G+ P +++ + L + L
Sbjct: 316 L-----APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELIL 362
Query: 140 EG--QFTDDDGTELVRLASRCLQYEPRER 166
+F G E L S L+ +P++R
Sbjct: 363 MEEIRFPRTLGPEAKSLLSGLLKKDPKQR 391
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 44/173 (25%), Positives = 65/173 (37%), Gaps = 38/173 (21%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 83
LR VL + LEY G+ ++ D+ A IL EDG+ +++ FG S LA
Sbjct: 127 LREVL---EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFG----------VSAFLA 172
Query: 84 FTPPEYLRTGRVT---------PESV-----------IYSFGTLLLDLLSGK----HIPP 119
R T PE + I+SFG ++L +G PP
Sbjct: 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP 232
Query: 120 SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
L L + L + + G ++ S CLQ +P +RP L
Sbjct: 233 MKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 34/191 (17%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 82
L ++L + + LE +KG H DL IL ++G P L G M + S
Sbjct: 137 LWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA 194
Query: 83 AFTPPEYLRTG----------------RVTPESVIYSFGTLLLDLLSGKH-----IPPSH 121
+ + + ++S G +L ++ G+
Sbjct: 195 LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
Query: 122 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181
++ L L + + L +L + + +P +RP+ L++ L LQ
Sbjct: 255 SVALAVQNQLSIPQSPRH--------SSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306
Query: 182 ET--EVPSHVL 190
+ + +L
Sbjct: 307 PAPGQHTTQIL 317
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 30 LAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLA 83
+ + Y ++ + + H D+ N IL D++G +LS FG + D K +
Sbjct: 160 VLNSFSYIHNE-KNICHRDVKPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYE 215
Query: 84 FTPPEYL--RTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
F PPE+ + + I+S G L + P
Sbjct: 216 FMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV--VP 251
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 40/196 (20%), Positives = 76/196 (38%), Gaps = 22/196 (11%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
M L +L + + L + ++ A+EY K H DL A L E+
Sbjct: 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH 148
Query: 60 NPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
+++ FGL + + A +T PE L + + +S +++FG LL ++ +
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 115 KHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169
P S +L+ + C E ++ L C Q+ P +RP+
Sbjct: 209 GMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSDRPSF 259
Query: 170 KSLVTALSPLQKETEV 185
+ A + +E+ +
Sbjct: 260 AEIHQAFETMFQESSI 275
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 3e-04
Identities = 43/193 (22%), Positives = 75/193 (38%), Gaps = 26/193 (13%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDG 59
M +L +L + L+ L + +A+EY H DL A +L ED
Sbjct: 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDN 154
Query: 60 NPRLSTFGLMKNSRDGKSYSTNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDLLS-G 114
++S FGL +++ S T PE LR + + +S ++SFG LL ++ S G
Sbjct: 155 VAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 211
Query: 115 KH----IPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169
+ IP + + ++ +M D C + + C + RP+
Sbjct: 212 RVPYPRIPLKDVVPRV-EKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMRPSF 261
Query: 170 KSLVTALSPLQKE 182
L L ++
Sbjct: 262 LQLREQLEHIKTH 274
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 22/149 (14%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN----LAF 84
L + +EY + + H D+ +L EDG+ +++ FG+ + + +N AF
Sbjct: 146 LIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAF 203
Query: 85 TPPEYLRTGRVT---PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 141
PE L R +++ G L + G P D + L
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFG-QCP-------FMDERIMCLHSKIKSQ 255
Query: 142 QFT----DDDGTELVRLASRCLQYEPRER 166
D +L L +R L P R
Sbjct: 256 ALEFPDQPDIAEDLKDLITRMLDKNPESR 284
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 26/157 (16%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--YSTNLAFTP 86
+ +A+ G + H DL L DG +L FG+ + + + T
Sbjct: 136 MLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 87 ----PEYLR-----------TGRVTPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRN 130
PE ++ +++P+S ++S G +L + GK P ++ I
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--K 248
Query: 131 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167
L + D E +F D +L + CL+ +P++R
Sbjct: 249 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 285
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 4e-04
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 33 ALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-----NLAFTP 86
++YC + H DL +L D N +++ FGL DG+ T N A
Sbjct: 128 GVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA-- 183
Query: 87 PEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 144
PE + GR PE I+S G +L LL G +P D ++ L +G F
Sbjct: 184 PEVIS-GRLYAGPEVDIWSSGVILYALLCG-TLP-------FDDDHVPTLFKKICDGIFY 234
Query: 145 --DDDGTELVRLASRCLQYEPRER 166
++ L LQ +P +R
Sbjct: 235 TPQYLNPSVISLLKHMLQVDPMKR 258
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 37/175 (21%), Positives = 70/175 (40%), Gaps = 25/175 (14%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 82
+ L +A+ ++Y SK H DL A + DE +++ FGL ++ D + YS +
Sbjct: 131 IGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 188
Query: 83 AF--------TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRDR 129
E L+T + T +S ++SFG LL +L++ G + +
Sbjct: 189 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 248
Query: 130 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
+ + C + L + +C + RP+ LV+ +S +
Sbjct: 249 RRLLQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 5e-04
Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 26/157 (16%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--TP 86
+ +A+ G + H DL L DG +L FG+ + + + T
Sbjct: 117 MLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 87 ----PEYLR-----------TGRVTPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRN 130
PE ++ +++P+S ++S G +L + GK P ++ I
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--K 229
Query: 131 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167
L + D E +F D +L + CL+ +P++R
Sbjct: 230 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 266
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 5e-04
Identities = 32/157 (20%), Positives = 61/157 (38%), Gaps = 26/157 (16%)
Query: 30 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--YSTNLAFTP 86
+ +A+ G + H DL L DG +L FG+ + + +
Sbjct: 164 MLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAV 220
Query: 87 ----PEYLR-----------TGRVTPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRN 130
PE ++ +++P+S ++S G +L + GK P ++ I
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--K 276
Query: 131 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167
L + D E +F D +L + CL+ +P++R
Sbjct: 277 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 313
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 5e-04
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 25/171 (14%)
Query: 28 LHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF-- 84
L +A+ +EY + H DL A + DE +++ FGL ++ D + YS
Sbjct: 131 LQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHA 188
Query: 85 ------TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQM 133
T E L+T R T +S ++SFG LL +LL+ G HI P +
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP 248
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
+ C + L ++ +C + +P RP + LV + +
Sbjct: 249 QPEYCPD---------SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 5e-04
Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 10/112 (8%)
Query: 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNS 72
P+ + +V + AL+ + G H D+ IL D L FG+ +
Sbjct: 127 RQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENILVSADDFAYLVDFGIASAT 184
Query: 73 RDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
D K L + PE T + IY+ +L + L+G PP
Sbjct: 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS--PP 234
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 40/217 (18%), Positives = 73/217 (33%), Gaps = 42/217 (19%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALYH-DLNAYRI 53
+L +L + + LR+VL +A L + T A+ H DL + I
Sbjct: 88 HEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 144
Query: 54 LFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESV----- 100
L ++G ++ GL +++ + T PE L + +
Sbjct: 145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQVDCFDSYKR 203
Query: 101 --IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEGQ-------- 142
I++FG +L ++ PP + + M C++ Q
Sbjct: 204 VDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRW 263
Query: 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
F+D T L +L C P R + L+ +
Sbjct: 264 FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 26/157 (16%)
Query: 25 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 81
R + + AQ LE+ + +Y DL +L D+DGN R+S GL + G++ +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 82 LAFTPPEYLRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNL 131
A T P ++ PE ++ + G L ++++ + P A
Sbjct: 349 YAGT-PGFM-----APELLLGEEYDFSVDYFALGVTLYEMIAAR--GPFRARG--EKVEN 398
Query: 132 QMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRER 166
+ L LE + D LQ +P +R
Sbjct: 399 KELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 6e-04
Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 23/164 (14%)
Query: 31 AQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF--- 84
A + Y + H DL A + ED ++ FG+ ++ + Y
Sbjct: 148 ADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 85 -TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSC 138
PE L+ G T S ++SFG +L ++ + + + L + + L D+C
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 265
Query: 139 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
+ L L C QY P+ RP+ +++++ +
Sbjct: 266 PD---------MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 7e-04
Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 24/166 (14%)
Query: 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF---- 84
A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y +
Sbjct: 203 AKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 261
Query: 85 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRNLQMLT-DS 137
PE + T +S ++SFG LL ++ S P +++ +M D
Sbjct: 262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDY 320
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183
E+ + C EP +RP LV L L +
Sbjct: 321 TTP---------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 8e-04
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
Query: 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNS 72
P+ + + +++ + H D+ IL D + ++ FG+ K
Sbjct: 104 SHGPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161
Query: 73 RDGKSYSTNLAF-TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
+ TN T PE + + IYS G +L ++L G+ PP
Sbjct: 162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE--PP 211
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 8e-04
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 22/147 (14%)
Query: 33 ALEYCTSKGRALYHDL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--TP- 86
ALE+ G +Y D+ N IL D +G+ L+ FGL K ++ F T
Sbjct: 171 ALEHLHKLG-IIYRDIKLEN---ILLDSNGHVVLTDFGLSKEFVADETERAY-DFCGTIE 225
Query: 87 ---PEYLRTGRVTPESVI--YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 141
P+ +R G + + +S G L+ +LL+G P + ++ L+
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDG--EKNSQAEISRRILKS 281
Query: 142 Q--FTDDDGTELVRLASRCLQYEPRER 166
+ + + L R L +P++R
Sbjct: 282 EPPYPQEMSALAKDLIQRLLMKDPKKR 308
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 357 | |||
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.98 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.98 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.98 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.98 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.97 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.97 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.97 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.97 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.97 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.97 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.97 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.97 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.97 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.97 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.97 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.97 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.97 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.97 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.97 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.97 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.97 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.97 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.97 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.97 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.97 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.97 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.97 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.97 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.97 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.97 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.97 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.97 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.97 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.97 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.97 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.97 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.97 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.97 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.97 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.97 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.97 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.97 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.97 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.97 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.97 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.97 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.97 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.97 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.97 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.97 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.97 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.97 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.97 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.97 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.97 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.97 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.97 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.97 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.97 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.97 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.97 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.97 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.97 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.97 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.97 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.97 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.97 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.97 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.97 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.97 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.97 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.97 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.97 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.97 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.97 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.97 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.97 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.97 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.97 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.97 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.97 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.97 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.97 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.97 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.97 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.97 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.97 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.97 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.97 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.97 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.97 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.97 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.97 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.97 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.97 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.97 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.97 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.97 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.97 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.97 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.97 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.97 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.97 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.97 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.97 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.97 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.97 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.97 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.97 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.97 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.97 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.97 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.97 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.96 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.96 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.96 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.96 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.96 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.96 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.96 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.96 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.96 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.96 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.96 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.96 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.96 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.96 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.96 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.96 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.96 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.96 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.96 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.96 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.96 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.96 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.96 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.96 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.96 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.96 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.96 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.96 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.96 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.96 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.96 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.96 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.96 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.96 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.96 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.96 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.96 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.96 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.96 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.96 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.96 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.96 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.96 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.96 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.96 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.96 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.96 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.96 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.96 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.96 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.96 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.96 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.96 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.96 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.96 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.96 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.96 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.96 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.96 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.96 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.96 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.96 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.96 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.96 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.96 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.96 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.96 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.96 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.96 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.96 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.96 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.96 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.96 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.96 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.96 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.96 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.96 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.96 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.96 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.96 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.96 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.96 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.96 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.96 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.96 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.96 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.96 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.96 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.96 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.96 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.96 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.95 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.95 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.95 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.95 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.95 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.95 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.95 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.95 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.95 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.95 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.95 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.95 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.95 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.94 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.94 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.92 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.91 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.88 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.86 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.85 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.82 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.81 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.8 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.79 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.78 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.77 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.77 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.76 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.75 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.71 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.7 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.69 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.69 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.69 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.68 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.68 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.68 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.68 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.67 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.66 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.66 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.66 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.66 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.66 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.66 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.65 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.65 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.65 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.64 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.64 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.64 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.64 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.63 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.62 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.61 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.61 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.6 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.59 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.59 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.59 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.57 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.57 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.57 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.56 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.55 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.55 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.51 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.51 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.5 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.5 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.49 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.49 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.48 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.48 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.47 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.47 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.46 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.45 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.45 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.45 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.45 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.44 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.44 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.44 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.44 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.43 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.43 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.42 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.42 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.42 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.42 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.42 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.42 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.41 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.41 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.41 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.4 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.4 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.4 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.39 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.39 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.39 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.39 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.39 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.39 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.39 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.39 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.38 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.38 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.38 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.37 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.36 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.35 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.35 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.35 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.35 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.34 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.34 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.34 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.34 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.33 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.33 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.33 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.32 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.32 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.32 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.32 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.31 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.31 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.3 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.27 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.27 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.26 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.24 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.24 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.23 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.22 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.22 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.22 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.22 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.21 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.21 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.2 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.2 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.2 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.2 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.2 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.2 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.19 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.19 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.19 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.19 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.19 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.18 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.18 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.18 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.18 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.18 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.17 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.16 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.15 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.15 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.14 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.14 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.14 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.14 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.13 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 99.13 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.13 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.12 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 99.12 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 99.11 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.11 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.11 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 99.11 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.11 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 99.11 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 99.1 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.1 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 99.1 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.09 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.08 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 99.08 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 99.08 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.08 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 99.07 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.06 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 99.04 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.04 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.03 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 99.03 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 99.03 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 99.02 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.98 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 98.98 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.98 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.97 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.97 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.95 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.95 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.93 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.93 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.93 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.91 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.91 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.85 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.84 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.81 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.8 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.79 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.76 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.73 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.72 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.71 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.65 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.64 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.63 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.62 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 98.59 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.58 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.56 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.49 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.49 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.45 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.43 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.42 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.41 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 98.28 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.23 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.21 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.19 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.17 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.17 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 98.15 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.99 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.97 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.94 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.92 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.87 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.86 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.83 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.81 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 97.78 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.67 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.46 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.33 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.32 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 97.31 | |
| 2ff4_A | 388 | Probable regulatory protein EMBR; winged-helix, te | 97.23 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 97.21 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 97.1 | |
| 4h7y_A | 161 | Dual specificity protein kinase TTK; mitotic check | 96.95 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 96.88 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 96.84 | |
| 4gns_B | 754 | Protein CSD3, chitin biosynthesis protein CHS6; FN | 96.42 | |
| 1zbp_A | 273 | Hypothetical protein VPA1032; alpha-beta protein, | 96.14 | |
| 3kae_A | 242 | CDC27, possible protein of nuclear scaffold; tetra | 96.07 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 95.99 | |
| 1ya0_A | 497 | SMG-7 transcript variant 2; alpha-helical repeat, | 95.87 | |
| 4g26_A | 501 | Pentatricopeptide repeat-containing protein AT2G3 | 95.74 | |
| 2uy1_A | 493 | Cleavage stimulation factor 77; RNA-binding protei | 95.57 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 95.39 | |
| 4gns_B | 754 | Protein CSD3, chitin biosynthesis protein CHS6; FN | 95.38 | |
| 3txn_A | 394 | 26S proteasome regulatory complex subunit P42B; PC | 95.35 | |
| 2uy1_A | 493 | Cleavage stimulation factor 77; RNA-binding protei | 95.32 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 94.97 | |
| 1zbp_A | 273 | Hypothetical protein VPA1032; alpha-beta protein, | 94.82 |
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=361.19 Aligned_cols=160 Identities=23% Similarity=0.299 Sum_probs=126.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 80 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~g 80 (357)
|+||||.+++. ..+++.+++.|+.||+.||.|||+.+ |+||||||+||+++.+ .+||+|||+++.........|
T Consensus 166 ~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~~~~g 239 (681)
T 2pzi_A 166 VGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLYG 239 (681)
T ss_dssp CCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTCCSCCCC
T ss_pred CCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhcccCCccCC
Confidence 57899998774 27999999999999999999999999 9999999999999975 899999999988777777789
Q ss_pred CCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhh
Q 018348 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 160 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 160 (357)
|+.|+|||++.++. +.++|||||||++|+|++|..|+..... ..+. ........++.+.++|.+||+
T Consensus 240 t~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~--------~~~~----~~~~~~~~~~~l~~li~~~l~ 306 (681)
T 2pzi_A 240 TPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV--------DGLP----EDDPVLKTYDSYGRLLRRAID 306 (681)
T ss_dssp CTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC--------SSCC----TTCHHHHHCHHHHHHHHHHTC
T ss_pred CccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc--------cccc----ccccccccCHHHHHHHhhhcc
Confidence 99999999998654 8899999999999999999766543211 1110 000011234678999999999
Q ss_pred cCCCCCCC-hhhHHHHhccc
Q 018348 161 YEPRERPN-PKSLVTALSPL 179 (357)
Q Consensus 161 ~~p~~Rps-~~~i~~~L~~~ 179 (357)
.||.+||+ ++++...|..+
T Consensus 307 ~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 307 PDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp SSGGGSCSSHHHHHHHHHHH
T ss_pred CChhhCCCHHHHHHHHHHHH
Confidence 99999995 55566666554
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=303.56 Aligned_cols=179 Identities=18% Similarity=0.277 Sum_probs=142.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
|+||||.++|.. ...++++.+++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++.....
T Consensus 113 ~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 113 CEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp CSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred CCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence 689999999964 4568999999999999999999999999 999999999999999999999999999865432
Q ss_pred -CCccCCCCCCchhhhcC---CCCCCcccchhHHHHHHHHHcCCCCCCcchhH-HhhhccccccccccccCCCCchhHHH
Q 018348 76 -KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
....||+.|||||++.+ ++++.++|||||||++|||+||+.||...... ............+. ....+..+++.
T Consensus 191 ~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~ 269 (307)
T 3omv_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD-LSKLYKNCPKA 269 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCC-STTSCTTSCHH
T ss_pred ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCC-cccccccchHH
Confidence 24579999999999974 35889999999999999999999998653221 11111111111111 12345567789
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+.+||.+||+.||++|||+.+|+..|+.++..
T Consensus 270 l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 270 MKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999887654
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=295.01 Aligned_cols=173 Identities=19% Similarity=0.246 Sum_probs=144.3
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
|+||||.++|.... ...++|..++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+||
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~Ki~DF 189 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNVKISDL 189 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCS
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCEEECCc
Confidence 68999999996432 246999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....||+.|||||++.++.++.++|||||||++|||+| |..||.......+...... ..
T Consensus 190 Glar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~-----~~ 264 (308)
T 4gt4_A 190 GLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN-----RQ 264 (308)
T ss_dssp CCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT-----TC
T ss_pred ccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CC
Confidence 998864322 23468999999999999999999999999999999998 7888876544332222111 11
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
..+.|..++..+.+|+.+||+.||++|||+.+|++.|+..
T Consensus 265 ~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 265 VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 2234667788999999999999999999999999999865
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-40 Score=296.87 Aligned_cols=176 Identities=21% Similarity=0.261 Sum_probs=140.9
Q ss_pred CCCccHHhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCC
Q 018348 1 MPNETLAKHLFHWE-------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg 67 (357)
|+||||.++|.... .++++|.+++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~DFG 203 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFG 203 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEcccc
Confidence 68999999996432 257999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhcccccccccccc
Q 018348 68 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140 (357)
Q Consensus 68 ~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (357)
+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||.............. ..+
T Consensus 204 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~-----g~~ 278 (329)
T 4aoj_A 204 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ-----GRE 278 (329)
T ss_dssp ----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHH-----TCC
T ss_pred cceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-----CCC
Confidence 99865432 23468999999999999999999999999999999999 8888876443322211111 112
Q ss_pred CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 141 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
...|..+++++.+|+.+||+.||++|||+.+|+..|+.+...
T Consensus 279 ~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 279 LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 344566778999999999999999999999999999988654
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=296.32 Aligned_cols=176 Identities=23% Similarity=0.266 Sum_probs=146.1
Q ss_pred CCCccHHhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCc
Q 018348 1 MPNETLAKHLFHW-----------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 69 (357)
Q Consensus 1 ~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~ 69 (357)
|+||||.++|... ....++|.+++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DFGla 175 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMS 175 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCSCH
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCcccc
Confidence 6899999999643 2357999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCC
Q 018348 70 KNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 70 ~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
+...... ...||+.|||||++.+..++.++|||||||++|||+| |+.||.......+....... ....
T Consensus 176 ~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~-----~~~~ 250 (299)
T 4asz_A 176 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG-----RVLQ 250 (299)
T ss_dssp HHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT-----CCCC
T ss_pred eecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CCCC
Confidence 8654321 2358999999999999999999999999999999998 88888765433322221111 1223
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.|..+++++.+|+.+||+.||++|||+.+|...|+.+...
T Consensus 251 ~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 251 RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 4566778999999999999999999999999999887543
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=296.07 Aligned_cols=177 Identities=16% Similarity=0.137 Sum_probs=143.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-CeEEecCCCccccCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-~~kl~dfg~~~~~~~~---- 75 (357)
|+||||.++|. +.+++++..+..|+.||+.||.|||+++ ||||||||+||||+.+| .+||+|||+++.....
T Consensus 132 ~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 132 LEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 68999999996 3568999999999999999999999999 99999999999999888 5999999999875432
Q ss_pred -----CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 76 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 76 -----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...+||+.|||||++.+..++.++|||||||++|||++|..||.......+....... +......++.+++.
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~s~~ 285 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE---PPPIREIPPSCAPL 285 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS---CCGGGGSCTTSCHH
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC---CCCchhcCccCCHH
Confidence 1346999999999999989999999999999999999999998654322111111111 11112345567789
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
+.++|.+||+.||.+|||+.++++.|.......
T Consensus 286 ~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 286 TAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 999999999999999999999998887665443
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=293.49 Aligned_cols=168 Identities=18% Similarity=0.243 Sum_probs=142.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.++|...++..+++..+..|+.||+.||.|||+++ |+||||||+||||+.+|.+||+|||+++..... .
T Consensus 105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 183 (350)
T 4b9d_A 105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183 (350)
T ss_dssp CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHH
T ss_pred CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCccccc
Confidence 57999999997666678899999999999999999999999 999999999999999999999999999876543 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
+.+||+.|||||++.+..++.++|||||||++|||++|+.||................. ...+..+++++.+||.
T Consensus 184 ~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-----~~~~~~~s~~~~~li~ 258 (350)
T 4b9d_A 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-----PPVSLHYSYDLRSLVS 258 (350)
T ss_dssp HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----CCCCTTSCHHHHHHHH
T ss_pred ccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-----CCCCccCCHHHHHHHH
Confidence 35799999999999988999999999999999999999999977544333222221111 1234456688999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||++|||+.++++
T Consensus 259 ~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 259 QLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHTCSSGGGSCCHHHHHT
T ss_pred HHccCChhHCcCHHHHhc
Confidence 999999999999999876
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=295.90 Aligned_cols=176 Identities=22% Similarity=0.276 Sum_probs=144.2
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
|+||||.++|.... ...+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+||
T Consensus 151 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~vKi~DF 229 (353)
T 4ase_A 151 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDF 229 (353)
T ss_dssp CTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCC
T ss_pred CCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCCCCCEEECcc
Confidence 68999999996432 245899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...||+.|||||++.+..++.++|||||||++|||+| |..||........-. .......
T Consensus 230 Glar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~----~~i~~g~ 305 (353)
T 4ase_A 230 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC----RRLKEGT 305 (353)
T ss_dssp GGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH----HHHHHTC
T ss_pred hhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHH----HHHHcCC
Confidence 9998764432 3357899999999999999999999999999999998 888886543211100 1111112
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+...|..+++++.++|.+||+.||++|||+.+|++.|+.+..
T Consensus 306 ~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 306 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 334455677899999999999999999999999999987753
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=283.68 Aligned_cols=167 Identities=19% Similarity=0.264 Sum_probs=134.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCCCCeeeC-CCCCeEEecCCCccccCCC--C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG--K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~~~H~dlk~~Nill~-~~~~~kl~dfg~~~~~~~~--~ 76 (357)
|+||||.++|. +.+++++..+..|+.||+.||.|||+++ +|+||||||+||||+ .+|.+||+|||+++..... .
T Consensus 111 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~ 188 (290)
T 3fpq_A 111 MTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccC
Confidence 68999999996 4578999999999999999999999986 599999999999997 4799999999999865443 3
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh-HHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
+.+||+.|||||++. ++++.++|||||||++|||+||+.||..... ..+......... +...+..+++++.+||
T Consensus 189 ~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~li 263 (290)
T 3fpq_A 189 AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEVKEII 263 (290)
T ss_dssp ESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----CGGGGGCCCHHHHHHH
T ss_pred CcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC----CCCCCccCCHHHHHHH
Confidence 457999999999987 4699999999999999999999999864322 111111111111 1122333457899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.||++|||+.++++
T Consensus 264 ~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 264 EGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHSCSSGGGSCCHHHHHT
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999876
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=287.60 Aligned_cols=167 Identities=20% Similarity=0.251 Sum_probs=138.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. .+.+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++..... .
T Consensus 153 ~~gg~L~~~l~---~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 153 LEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp CTTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCCCcHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 58999999995 357999999999999999999999999 999999999999999999999999999876443 3
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
+.+||+.|||||++.+..++.++|||||||++|||++|..||................. .....+..+++++.+||.
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~dli~ 305 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGFLD 305 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC---CCCSCGGGSCHHHHHHHH
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCCCccccCCHHHHHHHH
Confidence 56899999999999988999999999999999999999999876543322211111111 111223456688999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||++|||+.++++
T Consensus 306 ~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 306 RLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHSCSSTTTSCCHHHHTT
T ss_pred HHcCCChhHCcCHHHHhc
Confidence 999999999999999875
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-39 Score=284.80 Aligned_cols=164 Identities=20% Similarity=0.268 Sum_probs=139.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.++|. +.+.+++..+..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 114 ~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~ 190 (311)
T 4aw0_A 114 AKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190 (311)
T ss_dssp CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCC
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCccc
Confidence 57999999996 4578999999999999999999999999 999999999999999999999999999876432
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
.+.+||+.|||||++.+..++.++||||+||++|+|++|..||.......+....... ...+|..+++++.+|
T Consensus 191 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~dl 264 (311)
T 4aw0_A 191 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL------EYDFPEKFFPKARDL 264 (311)
T ss_dssp BCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------CCCCCTTCCHHHHHH
T ss_pred ccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCcccCHHHHHH
Confidence 2457999999999999889999999999999999999999999765444332222211 112344566889999
Q ss_pred HHHhhhcCCCCCCChhhHH
Q 018348 155 ASRCLQYEPRERPNPKSLV 173 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~ 173 (357)
|.+||+.||++|||+.++.
T Consensus 265 i~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 265 VEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHSCSSGGGSTTSGGGT
T ss_pred HHHHccCCHhHCcChHHHc
Confidence 9999999999999999864
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=285.41 Aligned_cols=178 Identities=15% Similarity=0.179 Sum_probs=136.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
|+||||.++|. ..+++|..+++|+.|++.||+|||++ + |+||||||+||||+.++.+||+|||+++..
T Consensus 83 ~~~gsL~~~l~---~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 83 HEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCcHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 68999999995 45799999999999999999999987 6 999999999999999999999999998765
Q ss_pred CCCC--------CccCCCCCCchhhhcCC------CCCCcccchhHHHHHHHHHcCCCCCCcchh---------------
Q 018348 73 RDGK--------SYSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSGKHIPPSHAL--------------- 123 (357)
Q Consensus 73 ~~~~--------~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~vl~el~~g~~~~~~~~~--------------- 123 (357)
.... ...||+.|||||++.+. .++.++|||||||++|||+||..|+.....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 4321 24689999999999754 367799999999999999999765432110
Q ss_pred HHhhhccccccccccccCC-CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 124 DLIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.............+.++.. .+.+++..+.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus 239 ~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 0111111111111111111 1234567899999999999999999999999999887654
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=282.65 Aligned_cols=161 Identities=24% Similarity=0.280 Sum_probs=134.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||||.++|. +.+.+++..+..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .
T Consensus 108 ~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 184 (304)
T 3ubd_A 108 LRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 184 (304)
T ss_dssp CTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCC
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCCcccc
Confidence 57999999996 4568999999999999999999999999 999999999999999999999999999865332 3
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
+.+||+.|||||++.+..++.++|||||||++|||++|..||............... ...+|..+++++.+||.
T Consensus 185 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 258 (304)
T 3ubd_A 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQSLLR 258 (304)
T ss_dssp SCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred ccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCcCCHHHHHHHH
Confidence 567999999999999989999999999999999999999999775443332222211 11234556788999999
Q ss_pred HhhhcCCCCCCChh
Q 018348 157 RCLQYEPRERPNPK 170 (357)
Q Consensus 157 ~cl~~~p~~Rps~~ 170 (357)
+||+.||++|||+.
T Consensus 259 ~~L~~dP~~R~ta~ 272 (304)
T 3ubd_A 259 MLFKRNPANRLGAG 272 (304)
T ss_dssp HHTCSSGGGSTTCS
T ss_pred HHcccCHHHCCCCC
Confidence 99999999999853
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-38 Score=274.54 Aligned_cols=163 Identities=20% Similarity=0.266 Sum_probs=129.4
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~ 79 (357)
+|+|.++|. +.+++++..+..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .+.+
T Consensus 96 ~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~ 172 (275)
T 3hyh_A 96 GNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 172 (275)
T ss_dssp CEEHHHHHH--HSCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC-------------
T ss_pred CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCee
Confidence 689999996 3568999999999999999999999999 999999999999999999999999999876543 3567
Q ss_pred CCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 80 TNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
||+.|||||++.+..+ +.++||||+||++|+|++|+.||.......+....... ...+|..+++++.++|.+|
T Consensus 173 GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~ 246 (275)
T 3hyh_A 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG------VYTLPKFLSPGAAGLIKRM 246 (275)
T ss_dssp --CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------CCCCCTTSCHHHHHHHHHH
T ss_pred ECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHH
Confidence 9999999999998775 57999999999999999999999765443332221111 1123445668899999999
Q ss_pred hhcCCCCCCChhhHHH
Q 018348 159 LQYEPRERPNPKSLVT 174 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~ 174 (357)
|+.||++|||+.++++
T Consensus 247 L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 247 LIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SCSSGGGSCCHHHHHH
T ss_pred ccCChhHCcCHHHHHc
Confidence 9999999999999986
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-38 Score=288.44 Aligned_cols=167 Identities=20% Similarity=0.251 Sum_probs=138.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
|+||+|.+++. .+.+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++..... .
T Consensus 230 ~~gG~L~~~i~---~~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 230 LEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp CTTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred CCCCcHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence 68999999995 357999999999999999999999999 999999999999999999999999999876443 3
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
+.+||+.|||||++.+..++.++|||||||++|||++|..||................. .....+..+++.+.+||.
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~dli~ 382 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGFLD 382 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCCSCTTSSCHHHHHHHH
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCCcccccCCHHHHHHHH
Confidence 56799999999999988999999999999999999999999876543322221111111 111223456688999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||++|||+.+++.
T Consensus 383 ~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 383 RLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HHSCSSTTTSCCHHHHTT
T ss_pred HHcCCChhHCcCHHHHhc
Confidence 999999999999999876
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-36 Score=266.02 Aligned_cols=163 Identities=21% Similarity=0.308 Sum_probs=122.7
Q ss_pred CCCccHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----
Q 018348 1 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---- 75 (357)
++||+|.++|..... ...++..+..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 97 ~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~ 175 (299)
T 4g31_A 97 CRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175 (299)
T ss_dssp CCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCCC----------
T ss_pred CCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCccceecCCCcccc
Confidence 579999999964322 24567778999999999999999999 999999999999999999999999999875432
Q ss_pred ------------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCC
Q 018348 76 ------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143 (357)
Q Consensus 76 ------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
.+.+||+.|||||++.+..++.++|||||||++|||++ ||......... ...+. ...+
T Consensus 176 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~---~~~~~----~~~~ 245 (299)
T 4g31_A 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRT---LTDVR----NLKF 245 (299)
T ss_dssp ----------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH---HHHHH----TTCC
T ss_pred ccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHH---HHHHh----cCCC
Confidence 12469999999999999899999999999999999997 55433211100 00000 1111
Q ss_pred C---chhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 144 T---DDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 144 ~---~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
| ....+.+.++|.+||+.||++|||+.++++
T Consensus 246 p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 246 PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2 123356788999999999999999999986
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=264.34 Aligned_cols=169 Identities=17% Similarity=0.296 Sum_probs=131.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC--------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-------- 74 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~-------- 74 (357)
+|+|.++|. +.+++++..+..|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++....
T Consensus 142 ~g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~ 218 (398)
T 4b99_A 142 ESDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF 218 (398)
T ss_dssp SEEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCC
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeecccCccccccc
Confidence 478999996 4678999999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccc----------------
Q 018348 75 GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---------------- 137 (357)
Q Consensus 75 ~~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~---------------- 137 (357)
..+.+||+.|||||++.+. .++.++||||+||++|||++|..||.+................+
T Consensus 219 ~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~ 298 (398)
T 4b99_A 219 MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAY 298 (398)
T ss_dssp CCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHH
T ss_pred cccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhh
Confidence 1346899999999998875 46899999999999999999999987643221111110000000
Q ss_pred --cccCC-------CCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 138 --CLEGQ-------FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 138 --~~~~~-------~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..... ..+..++++.+||.+||+.||++|||+.++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 299 IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000 01224578899999999999999999999876
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=260.65 Aligned_cols=168 Identities=20% Similarity=0.274 Sum_probs=127.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC-CCeEEecCCCccccCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~-~~~kl~dfg~~~~~~~~---- 75 (357)
++||+|.+++. .+++.++..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++.....
T Consensus 102 ~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~ 175 (361)
T 4f9c_A 102 LEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIEL 175 (361)
T ss_dssp CCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGG
T ss_pred CCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccc
Confidence 57999999993 5999999999999999999999999 9999999999999876 89999999999754322
Q ss_pred ----------------------------CCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHH-
Q 018348 76 ----------------------------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL- 125 (357)
Q Consensus 76 ----------------------------~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~- 125 (357)
.+.+||+.|+|||++.+. .++.++||||+||++|||++|+.||.......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~ 255 (361)
T 4f9c_A 176 LKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLT 255 (361)
T ss_dssp GGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHH
Confidence 124689999999999875 48899999999999999999998885421110
Q ss_pred -hhh--------------ccc-------------------------cc--------cccccccCCCCchhHHHHHHHHHH
Q 018348 126 -IRD--------------RNL-------------------------QM--------LTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 126 -~~~--------------~~~-------------------------~~--------~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
+.. ... .. ..............++++.+|+.+
T Consensus 256 ~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~ 335 (361)
T 4f9c_A 256 ALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDK 335 (361)
T ss_dssp HHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHH
T ss_pred HHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHH
Confidence 000 000 00 000000011123345778999999
Q ss_pred hhhcCCCCCCChhhHHH
Q 018348 158 CLQYEPRERPNPKSLVT 174 (357)
Q Consensus 158 cl~~~p~~Rps~~~i~~ 174 (357)
||+.||++|||+.++++
T Consensus 336 lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 336 LLDLNPASRITAEEALL 352 (361)
T ss_dssp HTCSCTTTSCCHHHHHT
T ss_pred HCcCChhHCcCHHHHhc
Confidence 99999999999999885
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=277.71 Aligned_cols=168 Identities=22% Similarity=0.246 Sum_probs=136.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CCc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~~ 78 (357)
++||+|.++|. +.+.+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++..... .+.
T Consensus 274 ~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~ 350 (689)
T 3v5w_A 274 MNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350 (689)
T ss_dssp CCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCc
Confidence 58999999996 4578999999999999999999999999 999999999999999999999999999876544 356
Q ss_pred cCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 79 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
+||+.|||||++.. ..++.++|+|||||++|||++|..||.......... ....+.. ....+|..+++++.+||.+
T Consensus 351 ~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~-i~~~i~~--~~~~~p~~~S~~a~dLI~~ 427 (689)
T 3v5w_A 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT--MAVELPDSFSPELRSLLEG 427 (689)
T ss_dssp CSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH-HHHHHHH--CCCCCCTTSCHHHHHHHHH
T ss_pred cCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhhcC--CCCCCCccCCHHHHHHHHH
Confidence 89999999999975 578999999999999999999999987542211100 0011111 1223455667899999999
Q ss_pred hhhcCCCCCCC-----hhhHHH
Q 018348 158 CLQYEPRERPN-----PKSLVT 174 (357)
Q Consensus 158 cl~~~p~~Rps-----~~~i~~ 174 (357)
||+.||.+|++ +.+|+.
T Consensus 428 lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 428 LLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HTCSCGGGCTTCSSSTHHHHTT
T ss_pred HccCCHhHCCCCCCCCHHHHhc
Confidence 99999999998 455543
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=271.64 Aligned_cols=170 Identities=16% Similarity=0.132 Sum_probs=139.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC--CCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED--GNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~--~~~kl~dfg~~~~~~~~~-- 76 (357)
|+||+|.++|.. +.+.+++..+..|+.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 236 ~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 236 MSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp CCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred cCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 579999999963 4568999999999999999999999999 9999999999999854 899999999998876553
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
..+||+.|||||++.+..++.++|||||||++|+|++|..||................. ......+..+++.+.+||
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~dli 391 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFI 391 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCSGGGTTSCHHHHHHH
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHH
Confidence 45799999999999998999999999999999999999999876544332222111111 111122234567899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.||.+|||+.++++
T Consensus 392 ~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 392 RKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999986
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.4e-33 Score=251.75 Aligned_cols=175 Identities=16% Similarity=0.258 Sum_probs=141.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.+++..+..|+.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 96 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 173 (325)
T 3kex_A 96 LPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 173 (325)
T ss_dssp CTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC
T ss_pred CCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCccccccc
Confidence 578999999964 3468999999999999999999999999 9999999999999999999999999998764432
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...+|..|+|||++.+..++.++||||||+++|+|++ |..||.............. ......+..++..+.+
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 248 (325)
T 3kex_A 174 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK-----GERLAQPQICTIDVYM 248 (325)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT-----TCBCCCCTTBCTTTTH
T ss_pred ccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc-----CCCCCCCCcCcHHHHH
Confidence 2346789999999998889999999999999999999 9888765432222111111 1112223344567889
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
++.+||+.||.+|||+.+++..|+.+...
T Consensus 249 li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 249 VMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp HHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999888654
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9.4e-33 Score=247.18 Aligned_cols=175 Identities=19% Similarity=0.216 Sum_probs=135.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--------SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH--------~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
+++|+|.+++. ...+++..++.|+.|++.||.||| +.+ ++||||||+||+++.++.+||+|||+++..
T Consensus 88 ~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 163 (301)
T 3q4u_A 88 HEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLAVMH 163 (301)
T ss_dssp CTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence 46899999993 568999999999999999999999 888 999999999999999999999999998754
Q ss_pred CCCC--------CccCCCCCCchhhhcCC------CCCCcccchhHHHHHHHHHcC----------CCCCCcchh-----
Q 018348 73 RDGK--------SYSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSG----------KHIPPSHAL----- 123 (357)
Q Consensus 73 ~~~~--------~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~vl~el~~g----------~~~~~~~~~----- 123 (357)
.... ...||..|+|||++.+. .++.++||||||+++|||++| ..||.....
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~ 243 (301)
T 3q4u_A 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 243 (301)
T ss_dssp ETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred ccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcch
Confidence 4322 23689999999999875 455799999999999999999 666543211
Q ss_pred HHhhhccccccccccc-cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 124 DLIRDRNLQMLTDSCL-EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 124 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
.............+.. ....+..++..+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1111111111111111 1112344678899999999999999999999999999765
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-32 Score=246.63 Aligned_cols=181 Identities=19% Similarity=0.295 Sum_probs=136.9
Q ss_pred CCCccHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCCCCeeeCCCCCeEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~-~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--- 75 (357)
++||+|.+++..... ..+++..++.++.|++.||.|||+.+ +++||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 195 (309)
T 3p86_A 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS 195 (309)
T ss_dssp CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------
T ss_pred CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccc
Confidence 478999999964221 24999999999999999999999986 4999999999999999999999999998754432
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||............... ......+..+++.+.++
T Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l 271 (309)
T 3p86_A 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK----CKRLEIPRNLNPQVAAI 271 (309)
T ss_dssp ------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHS----CCCCCCCTTSCHHHHHH
T ss_pred cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc----CCCCCCCccCCHHHHHH
Confidence 2456899999999999888999999999999999999999988754333222111111 11223445566889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccCCCC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKETEV 185 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~ 185 (357)
|.+||+.||.+|||+.++++.|+.+.....+
T Consensus 272 i~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 272 IEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998766443
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=9e-33 Score=248.59 Aligned_cols=178 Identities=20% Similarity=0.315 Sum_probs=142.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||||.+++.. ....+++.++..|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 89 IKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp CTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred cCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 578999999964 3568999999999999999999999999 9999999999999999999999999987654321
Q ss_pred --------------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCC
Q 018348 77 --------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 77 --------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
...||+.|+|||++.+..++.++||||||+++|+|++|..|+......... ............
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~~ 243 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---FGLNVRGFLDRY 243 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---SSBCHHHHHHHT
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---Hhhhhhcccccc
Confidence 346899999999999888999999999999999999998776543211110 000111111122
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
.+..+++.+.+++.+||+.||++|||+.++++.|+.+....
T Consensus 244 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 244 CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 34455578999999999999999999999999999887553
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-32 Score=244.66 Aligned_cols=180 Identities=25% Similarity=0.471 Sum_probs=146.6
Q ss_pred CCCccHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--- 75 (357)
++||+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 117 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 195 (321)
T 2qkw_B 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELDQT 195 (321)
T ss_dssp CTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC
T ss_pred CCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 47899999996433 246999999999999999999999999 999999999999999999999999998754322
Q ss_pred ---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhH-----------HhhhccccccccccccC
Q 018348 76 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----------LIRDRNLQMLTDSCLEG 141 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 141 (357)
....||..|+|||++.+..++.++||||||+++|+|++|+.|+...... ...........++....
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (321)
T 2qkw_B 196 HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD 275 (321)
T ss_dssp CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT
T ss_pred ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc
Confidence 1234789999999998888999999999999999999999887543211 11122223333444445
Q ss_pred CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 142 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
..+..++..+.+++.+||+.||++|||+.++++.|+.+..
T Consensus 276 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 5667788899999999999999999999999999987754
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-33 Score=250.72 Aligned_cols=178 Identities=14% Similarity=0.220 Sum_probs=137.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC----------CCceecCCCCCCeeeCCCCCeEEecCCCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK----------GRALYHDLNAYRILFDEDGNPRLSTFGLMK 70 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~----------~~~~H~dlk~~Nill~~~~~~kl~dfg~~~ 70 (357)
+++|||.+++. .+.+++..+..|+.|++.||.|||+. + ++||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~g~L~~~l~---~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 104 HEKGSLSDFLK---ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp CTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCccc
Confidence 47899999995 35699999999999999999999999 8 9999999999999999999999999997
Q ss_pred ccCCC------CCccCCCCCCchhhhcCC-----CCCCcccchhHHHHHHHHHcCCCCCCcchh----------------
Q 018348 71 NSRDG------KSYSTNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHAL---------------- 123 (357)
Q Consensus 71 ~~~~~------~~~~gt~~y~aPE~~~~~-----~~~~~~Di~slG~vl~el~~g~~~~~~~~~---------------- 123 (357)
..... ....||..|+|||++.+. .++.++||||||+++|+|++|..||.....
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T 3soc_A 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259 (322)
T ss_dssp EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence 65432 234689999999999863 456789999999999999999988754211
Q ss_pred HHhhhccccccccccccCC-CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 124 DLIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
..+..........+..... .+..++..+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 260 EDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0000000111111111111 1224567799999999999999999999999999887643
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-32 Score=245.66 Aligned_cols=179 Identities=28% Similarity=0.511 Sum_probs=146.9
Q ss_pred CCCccHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCCCCeeeCCCCCeEEecCCCccccCCC
Q 018348 1 MPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~---~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~ 75 (357)
++||+|.+++.... ..++++..+..|+.|++.||.|||+. + ++||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 187 (326)
T 3uim_A 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187 (326)
T ss_dssp CTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEECTTCCEEECCCSSCEECCSS
T ss_pred ccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEECCCCCEEeccCccccccCcc
Confidence 57899999997543 34599999999999999999999999 8 999999999999999999999999998865433
Q ss_pred C-----CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh-------------HHhhhccccccccc
Q 018348 76 K-----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-------------DLIRDRNLQMLTDS 137 (357)
Q Consensus 76 ~-----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-------------~~~~~~~~~~~~~~ 137 (357)
. ...||..|+|||++.+..++.++||||||+++|+|++|..||..... ............+.
T Consensus 188 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (326)
T 3uim_A 188 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 267 (326)
T ss_dssp SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCT
T ss_pred cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcCh
Confidence 2 33589999999999888899999999999999999999988753211 11112223333444
Q ss_pred cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 138 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
......+...+..+.+++.+||+.||.+|||+.+|++.|+...
T Consensus 268 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 268 DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp TCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 4455667778889999999999999999999999999998653
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-32 Score=251.15 Aligned_cols=175 Identities=21% Similarity=0.308 Sum_probs=141.6
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
++||+|.++|.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+||
T Consensus 169 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DF 247 (370)
T 2psq_A 169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADF 247 (370)
T ss_dssp CTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCC
T ss_pred CCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCCCCEEEccc
Confidence 47899999997532 245899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...+|..|+|||++.+..++.++|||||||++|||++ |..|+............ ....
T Consensus 248 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~-----~~~~ 322 (370)
T 2psq_A 248 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-----KEGH 322 (370)
T ss_dssp SSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-----HTTC
T ss_pred cCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-----hcCC
Confidence 9988654321 2345778999999998889999999999999999999 88777654322211111 1111
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
....+..++..+.+++.+||+.||.+||++.++++.|+.+..
T Consensus 323 ~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 323 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 223445567889999999999999999999999999988754
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-33 Score=250.54 Aligned_cols=175 Identities=15% Similarity=0.225 Sum_probs=142.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 98 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 175 (327)
T 3poz_A 98 MPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175 (327)
T ss_dssp CTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC---
T ss_pred cCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCccccc
Confidence 578999999964 4568999999999999999999999999 9999999999999999999999999987654332
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...+|..|+|||++.+..++.++||||||+++|+|++ |..||............ ........+..++..+..
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 250 (327)
T 3poz_A 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICTIDVYM 250 (327)
T ss_dssp ----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-----HTTCCCCCCTTBCHHHHH
T ss_pred ccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHH-----HcCCCCCCCccCCHHHHH
Confidence 2345778999999998899999999999999999999 88887654332221111 111122334456688999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
++.+||+.||.+|||+.+++..|+.+...
T Consensus 251 li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 251 IMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999888654
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-32 Score=247.25 Aligned_cols=165 Identities=22% Similarity=0.336 Sum_probs=137.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 96 ~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 172 (328)
T 3fe3_A 96 ASGGEVFDYLV--AHGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA 172 (328)
T ss_dssp CTTCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGT
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccc
Confidence 57899999996 3467999999999999999999999999 999999999999999999999999998765543 34
Q ss_pred ccCCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
..||+.|+|||++.+..+ +.++|||||||++|+|++|..||............... ....|...++.+.+++.
T Consensus 173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 246 (328)
T 3fe3_A 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG------KYRIPFYMSTDCENLLK 246 (328)
T ss_dssp TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHH
Confidence 578999999999998776 47999999999999999999998765544333222211 11233345678999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||.+|||+.++++
T Consensus 247 ~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 247 RFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHCCSSTTTSCCHHHHTT
T ss_pred HHCCCChhHCcCHHHHhc
Confidence 999999999999999876
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-32 Score=242.41 Aligned_cols=180 Identities=16% Similarity=0.219 Sum_probs=142.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 93 ~~g~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 169 (294)
T 4eqm_A 93 IEGPTLSEYIE--SHGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT 169 (294)
T ss_dssp CCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCcccccccccccc
Confidence 47899999996 3468999999999999999999999999 999999999999999999999999998765433
Q ss_pred CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
....||+.|+|||.+.+..++.++||||||+++|+|++|..||.................. ......+..++..+.+++
T Consensus 170 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li 248 (294)
T 4eqm_A 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP-NVTTDVRKDIPQSLSNVI 248 (294)
T ss_dssp -----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCC-CHHHHSCTTSCHHHHHHH
T ss_pred CccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCC-CcchhcccCCCHHHHHHH
Confidence 2346899999999999888999999999999999999999998765433322222221111 111123344567899999
Q ss_pred HHhhhcCCCCCC-ChhhHHHHhcccccCCC
Q 018348 156 SRCLQYEPRERP-NPKSLVTALSPLQKETE 184 (357)
Q Consensus 156 ~~cl~~~p~~Rp-s~~~i~~~L~~~~~~~~ 184 (357)
.+||+.||.+|| ++.++.+.|+.+.....
T Consensus 249 ~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 249 LRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp HHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred HHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 999999999998 89999999988866543
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-32 Score=247.24 Aligned_cols=175 Identities=19% Similarity=0.245 Sum_probs=141.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ..+.+++..++.|+.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 132 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (325)
T 3kul_A 132 MENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209 (325)
T ss_dssp CTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----CCE
T ss_pred CCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCcccee
Confidence 478999999953 4568999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...+|..|+|||++.+..++.++||||||+++|+|++ |..||............... .....+..++..+.
T Consensus 210 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~ 284 (325)
T 3kul_A 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-----YRLPAPMGCPHALH 284 (325)
T ss_dssp ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHH
T ss_pred eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-----CCCCCCCCcCHHHH
Confidence 1234668999999998889999999999999999999 88887654333222211111 12233445668899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+++.+||+.||.+|||+.+|++.|+.+...
T Consensus 285 ~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 285 QLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999988655
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=252.69 Aligned_cols=178 Identities=16% Similarity=0.184 Sum_probs=142.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC--CCCCeEEecCCCccccCCC-----
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~--~~~~~kl~dfg~~~~~~~~----- 75 (357)
||+|.+++.. ..+.+++..++.|+.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 135 g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~ 212 (364)
T 3op5_A 135 GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKA 212 (364)
T ss_dssp EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCC
T ss_pred CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccc
Confidence 7899999964 4578999999999999999999999999 99999999999998 8899999999998764322
Q ss_pred ------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh--------hccccccccccccC
Q 018348 76 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR--------DRNLQMLTDSCLEG 141 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 141 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||......... ......+.+.++.
T Consensus 213 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 291 (364)
T 3op5_A 213 YAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFP- 291 (364)
T ss_dssp SSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSC-
T ss_pred cccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcc-
Confidence 2234899999999999888999999999999999999999988743211100 0011111112211
Q ss_pred CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCCCC
Q 018348 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185 (357)
Q Consensus 142 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~ 185 (357)
+..++..+.+++.+||+.||.+||++.+|++.|+.+......
T Consensus 292 --~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 292 --AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp --TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred --cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 123457899999999999999999999999999888766544
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-32 Score=242.64 Aligned_cols=178 Identities=19% Similarity=0.328 Sum_probs=132.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++.. ....+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 101 CEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred cCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 468999999953 4567999999999999999999999999 999999999999999999999999998754421
Q ss_pred -CCccCCCCCCchhhhc---CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH-hhhccccccccccccCCCCchhHHH
Q 018348 76 -KSYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
....||..|+|||.+. +..++.++||||||+++|+|++|..||....... ...........+. .......+++.
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 257 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD-LSKVRSNCPKR 257 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCC-TTSSCTTSCHH
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcc-hhhccccCCHH
Confidence 2346899999999987 4567889999999999999999998886532211 1111111111111 11223456688
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 258 MKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999988754
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-32 Score=257.80 Aligned_cols=177 Identities=21% Similarity=0.307 Sum_probs=144.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
|++|+|.++|.......+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 57899999996433457999999999999999999999999 999999999999999999999999999876432
Q ss_pred CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....++..|+|||++....++.++||||||+++|||++ |..|+.............. ......+..+++.+.++
T Consensus 343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~l 417 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-----GYRMPRPENCPEELYNI 417 (454)
T ss_dssp CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH-----TCCCCCCTTSCHHHHHH
T ss_pred CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHH
Confidence 22345678999999998889999999999999999999 8888865433322211111 11223345567899999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
|.+||+.||++|||+.+|+..|+.+....
T Consensus 418 i~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 418 MMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred HHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 99999999999999999999999987653
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-32 Score=253.60 Aligned_cols=174 Identities=15% Similarity=0.176 Sum_probs=131.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC---CCCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~---~~~~kl~dfg~~~~~~~~-- 75 (357)
++||+|.++|.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 141 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~ 219 (400)
T 1nxk_A 141 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 219 (400)
T ss_dssp CCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC----
T ss_pred CCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccccCCCCc
Confidence 57899999997644567999999999999999999999999 999999999999987 789999999999865533
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccc--cccCCCCchhHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--CLEGQFTDDDGTELV 152 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~ 152 (357)
....||..|+|||++.+..++.++|||||||++|+|++|..||...............+... .........++..+.
T Consensus 220 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 299 (400)
T 1nxk_A 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 299 (400)
T ss_dssp -------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHH
Confidence 34568999999999998889999999999999999999999886542211000000000000 011111234567899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
+||.+||+.||.+|||+.+++..
T Consensus 300 ~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 300 MLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHCCCChhHCcCHHHHhcC
Confidence 99999999999999999999873
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-32 Score=257.15 Aligned_cols=176 Identities=23% Similarity=0.337 Sum_probs=142.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
|++|+|.++|.......+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 347 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 347 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------C
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCC
Confidence 57899999997544456899999999999999999999999 999999999999999999999999998765433 2335
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
++..|+|||++.+..++.++||||||+++|||++ |..|+............. ...+...+..+++.+.++|.+|
T Consensus 348 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~li~~c 422 (450)
T 1k9a_A 348 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-----KGYKMDAPDGCPPAVYDVMKNC 422 (450)
T ss_dssp CCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH-----TTCCCCCCTTCCHHHHHHHHHH
T ss_pred CCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCcCCHHHHHHHHHH
Confidence 6789999999998889999999999999999998 888876543221111111 1112334556778999999999
Q ss_pred hhcCCCCCCChhhHHHHhcccccC
Q 018348 159 LQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
|+.||.+|||+.+++..|+.+...
T Consensus 423 l~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 423 WHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cCCChhHCcCHHHHHHHHHHHHHh
Confidence 999999999999999999887543
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=250.64 Aligned_cols=175 Identities=21% Similarity=0.271 Sum_probs=133.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||||.+++.. .+..+++..++.|+.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 128 ~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 205 (373)
T 2qol_A 128 MENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205 (373)
T ss_dssp CTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred CCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCccce
Confidence 579999999963 4567999999999999999999999999 9999999999999999999999999988654332
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...++..|+|||++.+..++.++||||||+++|||++ |..|+.............. ......+..++..+.
T Consensus 206 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~ 280 (373)
T 2qol_A 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-----GYRLPPPMDCPAALY 280 (373)
T ss_dssp --------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT-----TEECCCCTTCBHHHH
T ss_pred eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCccccHHHH
Confidence 1124678999999998889999999999999999998 8888765433222111111 112223445668899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+++.+||+.||.+||++.+|++.|+.+...
T Consensus 281 ~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999988654
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-32 Score=246.18 Aligned_cols=179 Identities=17% Similarity=0.211 Sum_probs=139.7
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC-----eEEecCCCccccCCC--
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~-----~kl~dfg~~~~~~~~-- 75 (357)
+|||.+++.. ..+.+++..+..|+.|++.||.|||+.+ ++||||||+||+++.++. +||+|||+++.....
T Consensus 88 ~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~ 165 (330)
T 2izr_A 88 GPSLEDLFDL-CDRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET 165 (330)
T ss_dssp CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence 7899999964 3578999999999999999999999999 999999999999998887 999999998864322
Q ss_pred ---------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccc---cCCC
Q 018348 76 ---------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL---EGQF 143 (357)
Q Consensus 76 ---------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 143 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||........... ...+..... ....
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~-~~~i~~~~~~~~~~~~ 244 (330)
T 2izr_A 166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKER-YQKIGDTKRATPIEVL 244 (330)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHH-HHHHHHHHHHSCHHHH
T ss_pred CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHH-HHHHHhhhccCCHHHH
Confidence 245689999999999988899999999999999999999999865321110000 000000000 0000
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCCCC
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~ 185 (357)
...++ .+.+++.+||+.||.+||++.+|...|+.+......
T Consensus 245 ~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 245 CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 11234 899999999999999999999999999877665443
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-32 Score=242.14 Aligned_cols=167 Identities=19% Similarity=0.232 Sum_probs=135.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++.. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp CTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 479999999953 47999999999999999999999999 999999999999999999999999998765533 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..||............... .......+..++..+.+++.
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~ 251 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN---GTPELQNPEKLSAIFRDFLN 251 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH---CSCCCSCGGGSCHHHHHHHH
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---CCCCCCCccccCHHHHHHHH
Confidence 346899999999999888999999999999999999999988654322111111000 01111223455678999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||++|||+.++++
T Consensus 252 ~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHSCSSTTTSCCHHHHTT
T ss_pred HHccCChhHCcCHHHHhh
Confidence 999999999999999876
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-32 Score=257.33 Aligned_cols=178 Identities=24% Similarity=0.303 Sum_probs=141.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|||.++|....+..+++..++.|+.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 57899999996434467999999999999999999999999 9999999999999999999999999998654321
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||++.+..++.++||||||+++|||++ |..|+.............. ..+...+..++..+.++
T Consensus 339 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~l 413 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-----GYRMPCPPECPESLHDL 413 (452)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTSCHHHHHH
T ss_pred cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHH
Confidence 2345678999999998889999999999999999999 8888765433222211111 11223345667889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
|.+||+.||++|||+.+|+..|+.+.....
T Consensus 414 i~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 414 MCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 999999999999999999999999876544
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-32 Score=248.62 Aligned_cols=182 Identities=16% Similarity=0.125 Sum_probs=142.7
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC--CeEEecCCCccccCCC-----
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG--NPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~--~~kl~dfg~~~~~~~~----- 75 (357)
+|||.+++.....+.+++..++.|+.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||+++.....
T Consensus 141 ~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 219 (352)
T 2jii_A 141 GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVA 219 (352)
T ss_dssp CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCC
T ss_pred CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcccc
Confidence 789999997544578999999999999999999999999 99999999999999988 8999999998765422
Q ss_pred ------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcch--hHHhhhcc---ccccccccccCCCC
Q 018348 76 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRN---LQMLTDSCLEGQFT 144 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~ 144 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||.... ........ ..............
T Consensus 220 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (352)
T 2jii_A 220 YVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHW 299 (352)
T ss_dssp CCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCE
T ss_pred ccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhcccc
Confidence 22368999999999998889999999999999999999998886542 11111000 00000000001111
Q ss_pred chhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCCCC
Q 018348 145 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185 (357)
Q Consensus 145 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~ 185 (357)
..++..+.+++.+||+.||.+|||+.+|++.|+.+......
T Consensus 300 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 300 IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 23457899999999999999999999999999988766543
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-32 Score=242.86 Aligned_cols=179 Identities=12% Similarity=0.080 Sum_probs=139.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC-----eEEecCCCccccCCC--
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~-----~kl~dfg~~~~~~~~-- 75 (357)
+|||.+++.. .+.++++..+..|+.|++.||.|||+.+ ++||||||+||+++.++. +||+|||+++.....
T Consensus 89 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 166 (298)
T 1csn_A 89 GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 166 (298)
T ss_dssp CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence 7899999964 3557999999999999999999999999 999999999999987765 999999998765432
Q ss_pred ---------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh---HHhhhccccccccccccCCC
Q 018348 76 ---------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQMLTDSCLEGQF 143 (357)
Q Consensus 76 ---------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 143 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||..... ............... ....
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 245 (298)
T 1csn_A 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP-LREL 245 (298)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC-HHHH
T ss_pred cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc-HHHH
Confidence 234589999999999988899999999999999999999998865211 000000000000000 0011
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
...+++.+.+++.+||+.||++||++.+|++.|+.+.....
T Consensus 246 ~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 246 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 22345789999999999999999999999999998876543
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-32 Score=248.88 Aligned_cols=177 Identities=22% Similarity=0.287 Sum_probs=144.0
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
++||||.+++.... ...+++..++.|+.||+.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 157 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DF 235 (382)
T 3tt0_A 157 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADF 235 (382)
T ss_dssp CTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSC
T ss_pred cCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCCCcEEEccc
Confidence 46899999997543 246999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....+|..|+|||++.+..++.++||||||+++|+|++ |..|+............... .
T Consensus 236 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~-----~ 310 (382)
T 3tt0_A 236 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG-----H 310 (382)
T ss_dssp SCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-----C
T ss_pred CcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----C
Confidence 998865432 22346788999999998889999999999999999999 88887654333222111111 1
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
....+..++..+.+++.+||+.||++|||+.+|++.|+.+....
T Consensus 311 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 311 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 22334456688999999999999999999999999999886543
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-32 Score=244.85 Aligned_cols=177 Identities=21% Similarity=0.319 Sum_probs=138.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC--------eEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--------PRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~--------~kl~dfg~~~~~ 72 (357)
++||||.+++.. ....+++..++.|+.||+.||.|||+.+ ++||||||+||+++.++. +||+|||++...
T Consensus 94 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~ 171 (289)
T 4fvq_A 94 VKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171 (289)
T ss_dssp CTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTT
T ss_pred CCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccCcccccc
Confidence 468999999964 3445999999999999999999999999 999999999999988876 999999998776
Q ss_pred CCCCCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 73 RDGKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 73 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
.......||..|+|||++.+ ..++.++||||||+++|+|++|..++............... ....+...+..+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l 245 (289)
T 4fvq_A 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED------RHQLPAPKAAEL 245 (289)
T ss_dssp SCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT------TCCCCCCSSCTT
T ss_pred cCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc------cCCCCCCCCHHH
Confidence 55555668999999999987 56899999999999999999976555433211111111110 112223334578
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHHhcccccCCCC
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~ 185 (357)
.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 246 ~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 246 ANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999765443
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=243.27 Aligned_cols=165 Identities=19% Similarity=0.307 Sum_probs=136.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+||+++.+|.+||+|||+++..... .
T Consensus 87 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 163 (337)
T 1o6l_A 87 ANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163 (337)
T ss_dssp CTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCccc
Confidence 57899999996 3568999999999999999999999999 999999999999999999999999998764322 3
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||+.|+|||++.+..++.++|+||||+++|||++|..||............... ...+|..+++.+.++|.
T Consensus 164 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 237 (337)
T 1o6l_A 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLA 237 (337)
T ss_dssp CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred ccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 456899999999999888999999999999999999999998765433322221111 11234456688999999
Q ss_pred HhhhcCCCCCC-----ChhhHHH
Q 018348 157 RCLQYEPRERP-----NPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~i~~ 174 (357)
+||+.||.+|| ++.+|+.
T Consensus 238 ~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 238 GLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHhhcCHHHhcCCCCCCHHHHHc
Confidence 99999999999 7888765
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-32 Score=236.85 Aligned_cols=175 Identities=18% Similarity=0.267 Sum_probs=140.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. .+..+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 85 ISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred cCCCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 478999999964 3456999999999999999999999999 9999999999999999999999999987655432
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...+|..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...++.+.++
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~l 237 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-----HRLYRPHLASDTIYQI 237 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTSCHHHHHH
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC-----CCCCCCCcChHHHHHH
Confidence 2345667999999998889999999999999999999 88777654332221111111 1112233345789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+.+||+.||++|||+.++++.|+.+.+.
T Consensus 238 i~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 238 MYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 9999999999999999999999998654
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=243.92 Aligned_cols=180 Identities=19% Similarity=0.308 Sum_probs=140.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|||.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 95 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (295)
T 3ugc_A 95 LPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK 172 (295)
T ss_dssp CTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC----------
T ss_pred CCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCCcceee
Confidence 478999999964 3456999999999999999999999999 9999999999999999999999999988654332
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-----------ccccccccccCC
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQMLTDSCLEGQ 142 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 142 (357)
...++..|+|||.+.+..++.++||||||+++|+|++|..|+............ ............
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (295)
T 3ugc_A 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 252 (295)
T ss_dssp ---CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC
T ss_pred eccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCC
Confidence 223567799999999888999999999999999999998876543322111000 000111112233
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.+..+++.+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 253 ~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 253 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 4556678999999999999999999999999999887654
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-32 Score=245.14 Aligned_cols=175 Identities=15% Similarity=0.216 Sum_probs=138.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 98 ~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~ 175 (327)
T 3lzb_A 98 MPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175 (327)
T ss_dssp CSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC------------
T ss_pred cCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccccc
Confidence 578999999964 4567999999999999999999999999 9999999999999999999999999987654332
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...+|..|+|||++.+..++.++||||||+++|+|++ |..||............. .......+..++..+.+
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~ 250 (327)
T 3lzb_A 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQPPICTIDVYM 250 (327)
T ss_dssp ----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----TTCCCCCCTTBCHHHHH
T ss_pred ccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----cCCCCCCCccCCHHHHH
Confidence 2345778999999998889999999999999999999 888876543322211111 11122334456678999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
++.+||+.||.+|||+.+++..|+.+...
T Consensus 251 li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 251 IMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 99999999999999999999999988754
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=243.14 Aligned_cols=179 Identities=16% Similarity=0.200 Sum_probs=136.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
++||+|.+++. ...+++..++.++.|++.||.|||+. + ++||||||+||+++.++.+||+|||+++..
T Consensus 117 ~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 117 HENGSLYDYLK---STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp CTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred cCCCcHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCCceee
Confidence 46899999995 35799999999999999999999998 8 999999999999999999999999998765
Q ss_pred CCCC--------CccCCCCCCchhhhcCCCCCCc------ccchhHHHHHHHHHcC----------CCCCCcch-----h
Q 018348 73 RDGK--------SYSTNLAFTPPEYLRTGRVTPE------SVIYSFGTLLLDLLSG----------KHIPPSHA-----L 123 (357)
Q Consensus 73 ~~~~--------~~~gt~~y~aPE~~~~~~~~~~------~Di~slG~vl~el~~g----------~~~~~~~~-----~ 123 (357)
.... ...||..|+|||++.+...+.. +||||||+++|||++| ..|+.... .
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~ 272 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY 272 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCch
Confidence 4322 3468999999999987655554 9999999999999999 44443211 0
Q ss_pred HHhhhccccccccccccC-CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 124 DLIRDRNLQMLTDSCLEG-QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
.............+.... ..+..++..+.+++.+||+.||.+|||+.+|++.|+.+....
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 273 EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 111111111111111111 112367788999999999999999999999999999887654
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-32 Score=257.09 Aligned_cols=176 Identities=20% Similarity=0.314 Sum_probs=144.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
|+||+|.++|.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 376 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 376 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence 57899999997655677999999999999999999999999 9999999999999999999999999988764332
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||++.+..++.++||||||+++|||++ |..|+........... .....+...+..++..+.+|
T Consensus 377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~l 451 (495)
T 1opk_A 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEKDYRMERPEGCPEKVYEL 451 (495)
T ss_dssp TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-----HHTTCCCCCCTTCCHHHHHH
T ss_pred CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCCCCCCCCCCCHHHHHH
Confidence 2235678999999998889999999999999999999 8777765432221111 11112233455667899999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
|.+||+.||++|||+.+|++.|+.+...
T Consensus 452 i~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 452 MRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999988644
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=245.17 Aligned_cols=176 Identities=19% Similarity=0.192 Sum_probs=137.5
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC--CeEEecCCCccccCCC-----
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG--NPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~--~~kl~dfg~~~~~~~~----- 75 (357)
+|||.+++.. .+.+++..++.|+.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||+++.....
T Consensus 135 ~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~ 211 (345)
T 2v62_A 135 GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQ 211 (345)
T ss_dssp EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCC
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcEEEEeCCCceeccccccccc
Confidence 7899999963 348999999999999999999999999 99999999999998777 9999999998765321
Q ss_pred ------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH-----hhhccccccccccccCCCC
Q 018348 76 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFT 144 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 144 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||....... ........+.........+
T Consensus 212 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (345)
T 2v62_A 212 YQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPS 291 (345)
T ss_dssp CCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCT
T ss_pred chhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccc
Confidence 23468999999999998889999999999999999999998885421111 0001011111100000011
Q ss_pred chhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 145 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 145 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
..++..+.+++.+||+.||++|||+.+|++.|+.+..
T Consensus 292 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 292 GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1455789999999999999999999999999988754
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=239.15 Aligned_cols=165 Identities=21% Similarity=0.275 Sum_probs=137.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++. +.+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.+|.+||+|||+++..... ....
T Consensus 88 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~ 164 (318)
T 1fot_A 88 IEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC 164 (318)
T ss_dssp CCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCC
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCcccccc
Confidence 47899999996 3568999999999999999999999999 999999999999999999999999999876543 3567
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
||+.|+|||++.+..++.++|+||||+++|+|++|..||............... ...++...+..+.+++.+||
T Consensus 165 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~lL 238 (318)
T 1fot_A 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLSRLI 238 (318)
T ss_dssp SCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHT
T ss_pred CCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHh
Confidence 999999999999888999999999999999999999998764433222211111 11234455678999999999
Q ss_pred hcCCCCCC-----ChhhHHH
Q 018348 160 QYEPRERP-----NPKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rp-----s~~~i~~ 174 (357)
+.||.+|| ++.+|+.
T Consensus 239 ~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 239 TRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CSCTTTCTTSSTTTTHHHHT
T ss_pred ccCHHHcCCCcCCCHHHHhc
Confidence 99999999 7777774
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-32 Score=245.52 Aligned_cols=177 Identities=21% Similarity=0.272 Sum_probs=141.8
Q ss_pred CCCccHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC
Q 018348 1 MPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 58 (357)
Q Consensus 1 ~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~ 58 (357)
+++|+|.++|.... ...+++..++.|+.||+.||.|||+.+ ++||||||+||+++.+
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~ 210 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGEN 210 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGG
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEECCC
Confidence 46899999996532 267999999999999999999999999 9999999999999999
Q ss_pred CCeEEecCCCccccCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccc
Q 018348 59 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 131 (357)
Q Consensus 59 ~~~kl~dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~ 131 (357)
+.+||+|||+++..... ....+|..|+|||++.+..++.++||||||+++|+|++ |..|+.............
T Consensus 211 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 290 (343)
T 1luf_A 211 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR 290 (343)
T ss_dssp GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred CeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHh
Confidence 99999999998754322 23457889999999998889999999999999999999 888876543332221111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
.. .....+..++..+.+++.+||+.||++|||+.++++.|+.+....
T Consensus 291 ~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 291 DG-----NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CC-----CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 11 111234456688999999999999999999999999999887653
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=238.47 Aligned_cols=171 Identities=13% Similarity=0.190 Sum_probs=135.5
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---Ccc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~~~ 79 (357)
+|+|.+++.......+++..+..|+.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++...... ...
T Consensus 102 ~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 180 (308)
T 3g33_A 102 DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV 180 (308)
T ss_dssp CCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGG
T ss_pred hcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccCCcc
Confidence 479999997655556999999999999999999999999 9999999999999999999999999987665432 346
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccc--------------cccccc-----
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--------------TDSCLE----- 140 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~--------------~~~~~~----- 140 (357)
||..|+|||++.+..++.++|||||||++|+|++|..||................ ......
T Consensus 181 gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (308)
T 3g33_A 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPR 260 (308)
T ss_dssp CCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCC
T ss_pred ccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCC
Confidence 8999999999998889999999999999999999999886643322111111000 000000
Q ss_pred --CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 141 --GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 141 --~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....+.++..+.+++.+||+.||++|||+.++++
T Consensus 261 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 261 PVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0011235578999999999999999999999886
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=236.76 Aligned_cols=174 Identities=19% Similarity=0.284 Sum_probs=141.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++|+|.+++.. ..+.+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 87 MEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp CTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 478999999953 4567999999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....+|..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.++
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 239 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQI 239 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHH
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-----ccCCCCCcCCHHHHHH
Confidence 23346778999999998889999999999999999999 88777654433222221111 1122233455789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+.+||+.||.+|||+.++++.|+.+..
T Consensus 240 i~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 240 MNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 999999999999999999999987754
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-32 Score=244.69 Aligned_cols=179 Identities=19% Similarity=0.263 Sum_probs=136.5
Q ss_pred CCCccHHhhhccCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC
Q 018348 1 MPNETLAKHLFHWE----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~ 76 (357)
+++|+|.+++.... ...+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~ 191 (323)
T 3qup_A 113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191 (323)
T ss_dssp CTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred ccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeeccccccccccc
Confidence 46899999995321 236999999999999999999999999 9999999999999999999999999987654332
Q ss_pred ------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHH
Q 018348 77 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 77 ------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+..++.
T Consensus 192 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 266 (323)
T 3qup_A 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG-----NRLKQPPECME 266 (323)
T ss_dssp ---------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-----CCCCCCTTCCH
T ss_pred cccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC-----CCCCCCCccCH
Confidence 2345678999999998889999999999999999999 78777653322221111111 11223445668
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHHHhcccccCCCC
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~ 185 (357)
.+.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 267 ~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 267 EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 899999999999999999999999999998776443
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-32 Score=251.01 Aligned_cols=174 Identities=26% Similarity=0.375 Sum_probs=140.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. .+..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 194 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 194 VQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 578999999963 3457999999999999999999999999 9999999999999999999999999987654321
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...++..|+|||.+.++.++.++||||||+++|||++ |..|+.............. ......+..++..+.+
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~ 346 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK-----GGRLPCPELCPDAVFR 346 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT-----TCCCCCCTTCCHHHHH
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHH
Confidence 1224667999999998889999999999999999998 8877765433322211111 1122334456688999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+|.+||+.||++|||+.+|++.|+.+..
T Consensus 347 li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 347 LMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999987753
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=239.10 Aligned_cols=180 Identities=17% Similarity=0.246 Sum_probs=135.3
Q ss_pred CCCccHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCCCCeeeCCCCC-eEEecCCCccccCCC
Q 018348 1 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTS---KGRALYHDLNAYRILFDEDGN-PRLSTFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~---~~~~~H~dlk~~Nill~~~~~-~kl~dfg~~~~~~~~ 75 (357)
++||||.+++..... ..+++..++.++.|++.||.|||+ .+ ++||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 478999999974332 358999999999999999999999 77 999999999999998886 799999998765433
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||........... ... ........+..++..+.++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~l~~l 236 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAV-HNGTRPPLIKNLPKPIESL 236 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH--HHH-HTTCCCCCBTTCCHHHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH--HHH-hcCCCCCcccccCHHHHHH
Confidence 345689999999999988899999999999999999999988764211110000 000 0001112233456789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
+.+||+.||.+|||+.++++.|+.+.....
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999988876543
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-32 Score=246.62 Aligned_cols=160 Identities=19% Similarity=0.278 Sum_probs=131.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. +.+.+++..+..|+.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++..... .
T Consensus 106 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 182 (353)
T 3txo_A 106 VNGGDLMFHIQ--KSRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTA 182 (353)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCCcccc
Confidence 57899999996 3568999999999999999999999999 999999999999999999999999998754322 3
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
..+||+.|+|||++.+..++.++|||||||++|||++|..||............... ...+|...+..+.+++.
T Consensus 183 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 256 (353)
T 3txo_A 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLHEDATGILK 256 (353)
T ss_dssp ---CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred ccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 457899999999999888999999999999999999999998765443332222111 11234445678999999
Q ss_pred HhhhcCCCCCCCh
Q 018348 157 RCLQYEPRERPNP 169 (357)
Q Consensus 157 ~cl~~~p~~Rps~ 169 (357)
+||+.||.+||++
T Consensus 257 ~lL~~dP~~R~~~ 269 (353)
T 3txo_A 257 SFMTKNPTMRLGS 269 (353)
T ss_dssp HHTCSSGGGSTTS
T ss_pred HHhhhCHHHccCC
Confidence 9999999999998
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-32 Score=240.93 Aligned_cols=180 Identities=13% Similarity=0.149 Sum_probs=140.5
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee---CCCCCeEEecCCCccccCCC----
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill---~~~~~~kl~dfg~~~~~~~~---- 75 (357)
+|||.+++.. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (296)
T 3uzp_A 88 GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccc
Confidence 7899999953 3567999999999999999999999999 9999999999999 47889999999998765432
Q ss_pred -------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccccccccc---CCCCc
Q 018348 76 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE---GQFTD 145 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 145 (357)
....||..|+|||++.+..++.++||||||+++|+|++|+.||........ ......+...... ...+.
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 244 (296)
T 3uzp_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTPIEVLCK 244 (296)
T ss_dssp BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHHSCHHHHTT
T ss_pred ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh-hhhhhhhcccccCCchHHHHh
Confidence 234689999999999988899999999999999999999988864211000 0000000000000 01112
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCCCC
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~ 185 (357)
.+++.+.+++.+||+.||++|||+.+|++.|+.+......
T Consensus 245 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 245 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 3457899999999999999999999999999988766543
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=243.94 Aligned_cols=180 Identities=17% Similarity=0.206 Sum_probs=136.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------CCceecCCCCCCeeeCCCCCeEEecCCCccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK---------GRALYHDLNAYRILFDEDGNPRLSTFGLMKN 71 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---------~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~ 71 (357)
+++|||.+++. ....++..++.|+.||+.||.|||+. + ++||||||+|||++.++.+||+|||+++.
T Consensus 94 ~~~g~L~~~l~---~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 94 YPNGSLXKYLS---LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp CTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCCCcHHHHHh---hcccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEEeeccceee
Confidence 47899999995 34569999999999999999999999 8 99999999999999999999999999876
Q ss_pred cCCC------------CCccCCCCCCchhhhcC-------CCCCCcccchhHHHHHHHHHcCCCCCCcchh-HH------
Q 018348 72 SRDG------------KSYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DL------ 125 (357)
Q Consensus 72 ~~~~------------~~~~gt~~y~aPE~~~~-------~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-~~------ 125 (357)
.... ....||..|+|||++.+ ..++.++||||||+++|||++|..|+..... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~ 249 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ 249 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence 5422 13458999999999986 3456789999999999999999766432110 00
Q ss_pred -----------hhhccccccccccccCC--CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 126 -----------IRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 126 -----------~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
...........+..+.. ....+++.+.++|.+||+.||++|||+.++++.|+.+.....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 250 TEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred cccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 00000000001111111 122366789999999999999999999999999998876544
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-32 Score=238.84 Aligned_cols=174 Identities=21% Similarity=0.285 Sum_probs=132.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (281)
T 1mp8_A 97 CTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 174 (281)
T ss_dssp CTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC---------------
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCccccccc
Confidence 468999999964 3457999999999999999999999999 9999999999999999999999999987654432
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...+|..|+|||++.+..++.++||||||+++|+|++ |..||.............. ......+..+++.+.++
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~l 249 (281)
T 1mp8_A 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTLYSL 249 (281)
T ss_dssp ----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TCCCCCCTTCCHHHHHH
T ss_pred ccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHH
Confidence 2245678999999998889999999999999999997 8777764332211111111 01122344566889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+.+||+.||++|||+.++++.|+.+..
T Consensus 250 i~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 250 MTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999987753
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=243.78 Aligned_cols=165 Identities=20% Similarity=0.290 Sum_probs=136.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.+|.+||+|||+++.... ..
T Consensus 100 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 176 (345)
T 1xjd_A 100 LNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 176 (345)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCccc
Confidence 47999999996 3468999999999999999999999999 99999999999999999999999999876432 23
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||+.|+|||++.+..++.++|+|||||++|||++|..||............... ...++..++..+.++|.
T Consensus 177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 250 (345)
T 1xjd_A 177 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAKDLLV 250 (345)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred CCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CCCCCcccCHHHHHHHH
Confidence 457899999999999888999999999999999999999998765433222211111 11234445688999999
Q ss_pred HhhhcCCCCCCChh-hHHH
Q 018348 157 RCLQYEPRERPNPK-SLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~-~i~~ 174 (357)
+||+.||.+||++. +|+.
T Consensus 251 ~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 251 KLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp HHSCSSGGGSBTTBSCGGG
T ss_pred HHhcCCHhHcCCChHHHHc
Confidence 99999999999997 6653
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=236.53 Aligned_cols=176 Identities=24% Similarity=0.460 Sum_probs=139.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-ceecCCCCCCeeeCCCCC-----eEEecCCCccccCC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR-ALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRD 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~H~dlk~~Nill~~~~~-----~kl~dfg~~~~~~~ 74 (357)
+++|+|.+++.. ...++++..++.++.|++.||.|||+.++ ++||||||+||+++.++. +||+|||+++....
T Consensus 103 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~ 181 (287)
T 4f0f_A 103 VPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH 181 (287)
T ss_dssp CTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS
T ss_pred cCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc
Confidence 468999999964 45689999999999999999999999863 999999999999987776 99999999876554
Q ss_pred C-CCccCCCCCCchhhhcC--CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 75 G-KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 75 ~-~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
. ....||..|+|||++.. ..++.++||||||+++|+|++|..||.......... .............+..+++.+
T Consensus 182 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l 259 (287)
T 4f0f_A 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEGLRPTIPEDCPPRL 259 (287)
T ss_dssp CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSCCCCCCCTTSCHHH
T ss_pred cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccCCCCCCCcccCHHH
Confidence 3 24578999999999843 457889999999999999999999886532211100 000111112223445566899
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
.+++.+||+.||.+|||+.++++.|+.+
T Consensus 260 ~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 260 RNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 9999999999999999999999998764
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=238.78 Aligned_cols=167 Identities=20% Similarity=0.262 Sum_probs=135.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 124 ~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 199 (321)
T 2c30_A 124 LQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 199 (321)
T ss_dssp CCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccc
Confidence 57999999994 457999999999999999999999999 999999999999999999999999998765433 3
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..|+............... ..+. ...+..+++.+.+++.
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~l~~li~ 276 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS-PPPK--LKNSHKVSPVLRDFLE 276 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-SCCC--CTTGGGSCHHHHHHHH
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCC--cCccccCCHHHHHHHH
Confidence 457899999999999888999999999999999999999888654332221111111 1110 1112334578999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||++|||+.++++
T Consensus 277 ~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 277 RMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHSCSSTTTSCCHHHHHT
T ss_pred HHccCChhhCcCHHHHhc
Confidence 999999999999999986
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=233.69 Aligned_cols=172 Identities=18% Similarity=0.274 Sum_probs=133.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CceecCCCCCCeeeCC--------CCCeEEecCCCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDE--------DGNPRLSTFGLMK 70 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~~~H~dlk~~Nill~~--------~~~~kl~dfg~~~ 70 (357)
++||+|.+++. .+.+++..+..++.|++.||.|||+.+ +++||||||+||+++. ++.+||+|||+++
T Consensus 88 ~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 88 ARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp CTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred CCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 46899999993 568999999999999999999999987 3789999999999985 7789999999987
Q ss_pred ccCCCC--CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhH
Q 018348 71 NSRDGK--SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 148 (357)
Q Consensus 71 ~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (357)
...... ...||..|+|||.+.+..++.++||||||+++|+|++|..||............... ......+..++
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 240 (271)
T 3dtc_A 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN----KLALPIPSTCP 240 (271)
T ss_dssp -----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS----CCCCCCCTTCC
T ss_pred ccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC----CCCCCCCcccC
Confidence 654432 456899999999999888999999999999999999999988754332222111111 11223344566
Q ss_pred HHHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 149 TELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 149 ~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+.+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 241 ~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 241 EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 8899999999999999999999999998754
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=243.31 Aligned_cols=160 Identities=19% Similarity=0.301 Sum_probs=133.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+||+++.+|.+||+|||+++.... ..
T Consensus 103 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 179 (353)
T 2i0e_A 103 VNGGDLMYHIQ--QVGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 179 (353)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccc
Confidence 57999999996 3467999999999999999999999999 99999999999999999999999999876432 23
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||+.|+|||++.+..++.++|+|||||++|||++|..||............... ...+|..++..+.++|.
T Consensus 180 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 253 (353)
T 2i0e_A 180 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAVAICK 253 (353)
T ss_dssp CCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred cccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHH
Confidence 457899999999999888999999999999999999999998765433322221111 11234456688999999
Q ss_pred HhhhcCCCCCCCh
Q 018348 157 RCLQYEPRERPNP 169 (357)
Q Consensus 157 ~cl~~~p~~Rps~ 169 (357)
+||+.||.+||+.
T Consensus 254 ~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 254 GLMTKHPGKRLGC 266 (353)
T ss_dssp HHTCSCTTSCTTC
T ss_pred HHhhcCHHHcCCC
Confidence 9999999999964
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=243.94 Aligned_cols=169 Identities=18% Similarity=0.223 Sum_probs=136.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC----CeEEecCCCccccCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~----~~kl~dfg~~~~~~~~- 75 (357)
++||+|.++|. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||+++.....
T Consensus 97 ~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~ 173 (361)
T 2yab_A 97 VSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173 (361)
T ss_dssp CCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC
Confidence 47999999996 4568999999999999999999999999 99999999999998776 7999999999876543
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....||+.|+|||++.+..++.++||||||+++|+|++|..||.................. .....+..++..+.+
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~ 251 (361)
T 2yab_A 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD--FDEEFFSQTSELAKD 251 (361)
T ss_dssp CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSCHHHHH
T ss_pred ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--CCchhccCCCHHHHH
Confidence 3456899999999999888999999999999999999999998765433222211111100 011111234578999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
+|.+||+.||.+|||+.+++.
T Consensus 252 li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 252 FIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHCCCChhHCcCHHHHhc
Confidence 999999999999999999885
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-32 Score=246.38 Aligned_cols=182 Identities=21% Similarity=0.281 Sum_probs=142.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ....+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 108 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 185 (327)
T 3lxl_A 108 LPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 185 (327)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEE
T ss_pred cCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCCccce
Confidence 468999999963 2457999999999999999999999999 9999999999999999999999999988654332
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc----------ccccccccCCC
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ----------MLTDSCLEGQF 143 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 143 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..|+.............. ...........
T Consensus 186 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (327)
T 3lxl_A 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA 265 (327)
T ss_dssp CSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCC
T ss_pred eeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCC
Confidence 23467789999999988889999999999999999999988765433221111100 01111122334
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
+..+++.+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 266 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 266 PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 55667899999999999999999999999999999876543
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=236.06 Aligned_cols=177 Identities=21% Similarity=0.256 Sum_probs=141.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++|+|.+++.. ....+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (298)
T 3pls_A 105 MCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSV 182 (298)
T ss_dssp CTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCS
T ss_pred ccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccc
Confidence 468999999964 4578999999999999999999999999 999999999999999999999999998754322
Q ss_pred ---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhH-HhhhccccccccccccCCCCchhHHHH
Q 018348 76 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
....+|..|+|||.+.+..++.++||||||+++|+|++|..|+...... ....... .......+..++..+
T Consensus 183 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l 257 (298)
T 3pls_A 183 QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-----QGRRLPQPEYCPDSL 257 (298)
T ss_dssp CCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH-----TTCCCCCCTTCCHHH
T ss_pred ccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh-----cCCCCCCCccchHHH
Confidence 2345678899999999888999999999999999999976665432111 1111100 011122334456789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 258 ~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 258 YQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999998876543
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-31 Score=232.17 Aligned_cols=176 Identities=19% Similarity=0.242 Sum_probs=140.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 79 (357)
++||||.+++.......+++..++.|+.|++.||.|||+.+ +++||||||+||+++.++.++++|||+..... .....
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-~~~~~ 169 (271)
T 3kmu_A 91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-SPGRM 169 (271)
T ss_dssp CTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-CTTCB
T ss_pred cCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec-ccCcc
Confidence 47899999997644557999999999999999999999875 49999999999999999999999888765432 23456
Q ss_pred CCCCCCchhhhcCCCCCC---cccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 80 TNLAFTPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~---~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
||..|+|||.+.+...+. ++||||||+++|+|++|..||............... ......+..++..+.+++.
T Consensus 170 ~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~ 245 (271)
T 3kmu_A 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE----GLRPTIPPGISPHVSKLMK 245 (271)
T ss_dssp SCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS----CCCCCCCTTCCHHHHHHHH
T ss_pred CCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc----CCCCCCCCCCCHHHHHHHH
Confidence 899999999998765444 899999999999999999988754333222111111 1122344556688999999
Q ss_pred HhhhcCCCCCCChhhHHHHhccccc
Q 018348 157 RCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+||+.||++|||+.++++.|+.+..
T Consensus 246 ~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 246 ICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhc
Confidence 9999999999999999999987753
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=241.34 Aligned_cols=175 Identities=21% Similarity=0.267 Sum_probs=137.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 128 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 205 (333)
T 1mqb_A 128 MENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 205 (333)
T ss_dssp CTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC------------
T ss_pred CCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhcccccccc
Confidence 468999999964 4568999999999999999999999999 9999999999999999999999999987654332
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...+|..|+|||++.+..++.++||||||+++|+|++ |..|+............... .....+..++..+.
T Consensus 206 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~ 280 (333)
T 1mqb_A 206 TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-----FRLPTPMDCPSAIY 280 (333)
T ss_dssp -----CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTCBHHHH
T ss_pred ccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCC-----CcCCCcccCCHHHH
Confidence 1234678999999998889999999999999999998 88887654332221111111 11223445668899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+++.+||+.||.+||++.++++.|+.+...
T Consensus 281 ~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 281 QLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999887654
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=246.52 Aligned_cols=159 Identities=25% Similarity=0.353 Sum_probs=128.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC------CccCCCCCCchhhhc
Q 018348 18 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLR 91 (357)
Q Consensus 18 l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~------~~~gt~~y~aPE~~~ 91 (357)
+++..++.|+.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++...... ...||..|+|||++.
T Consensus 190 l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 268 (359)
T 3vhe_A 190 LTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 268 (359)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhc
Confidence 899999999999999999999999 9999999999999999999999999987654322 235688899999999
Q ss_pred CCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChh
Q 018348 92 TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 170 (357)
Q Consensus 92 ~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 170 (357)
+..++.++||||||+++|+|++ |..||.............. .......+..+++.+.+++.+||+.||.+|||+.
T Consensus 269 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ 344 (359)
T 3vhe_A 269 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 344 (359)
T ss_dssp HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH----HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH----cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 8889999999999999999998 8888765322111101111 1111223444567899999999999999999999
Q ss_pred hHHHHhccccc
Q 018348 171 SLVTALSPLQK 181 (357)
Q Consensus 171 ~i~~~L~~~~~ 181 (357)
+|++.|+.+..
T Consensus 345 ell~~L~~~~~ 355 (359)
T 3vhe_A 345 ELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987754
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=242.94 Aligned_cols=165 Identities=16% Similarity=0.205 Sum_probs=137.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+||+++.+|.+||+|||+++..... ....
T Consensus 123 ~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~ 199 (350)
T 1rdq_E 123 VAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC 199 (350)
T ss_dssp CTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCE
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCccccc
Confidence 478999999963 467999999999999999999999999 999999999999999999999999999876544 3557
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...+|..++..+.++|.+||
T Consensus 200 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~lL 273 (350)
T 1rdq_E 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLLRNLL 273 (350)
T ss_dssp ECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHHHHHS
T ss_pred CCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHh
Confidence 899999999999888999999999999999999999998765433222221111 11234455688999999999
Q ss_pred hcCCCCCCC-----hhhHHH
Q 018348 160 QYEPRERPN-----PKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rps-----~~~i~~ 174 (357)
+.||.+||+ +.+|+.
T Consensus 274 ~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 274 QVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CSCTTTCTTSSTTTTHHHHT
T ss_pred hcCHHhccCCccCCHHHHHh
Confidence 999999998 777765
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-32 Score=247.79 Aligned_cols=177 Identities=20% Similarity=0.288 Sum_probs=141.3
Q ss_pred CCCccHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC---CeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~---~~kl~dfg~~~~~ 72 (357)
++||+|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.+| .+||+|||+++..
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~ 234 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence 47899999996432 246999999999999999999999999 99999999999998555 5999999998743
Q ss_pred C------CCCCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCc
Q 018348 73 R------DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145 (357)
Q Consensus 73 ~------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
. ......||..|+|||++.+..++.++|||||||++|||++ |..||............... .....+.
T Consensus 235 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~-----~~~~~~~ 309 (367)
T 3l9p_A 235 YRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-----GRMDPPK 309 (367)
T ss_dssp HHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-----CCCCCCT
T ss_pred ccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCc
Confidence 1 2234457889999999988889999999999999999998 88887654433222211111 1122344
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
.++..+.+|+.+||+.||.+|||+.+|++.|+.+....
T Consensus 310 ~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 310 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 55678999999999999999999999999998886553
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-31 Score=247.04 Aligned_cols=169 Identities=16% Similarity=0.203 Sum_probs=137.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC---CCCCeEEecCCCccccCCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~---~~~~~kl~dfg~~~~~~~~~- 76 (357)
++||+|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+||+++ .++.+||+|||+++......
T Consensus 92 ~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 92 VTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp CBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 468999999973 567999999999999999999999999 99999999999998 46789999999997765432
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.................. ........+++.+.+
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~ 246 (444)
T 3soa_A 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD--FPSPEWDTVTPEAKD 246 (444)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHH
T ss_pred eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC--CCccccccCCHHHHH
Confidence 357899999999999888999999999999999999999998765433322222111111 111122345678999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
+|.+||+.||.+|||+.++++
T Consensus 247 li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 247 LINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHcCCChhHCCCHHHHhc
Confidence 999999999999999999987
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=237.51 Aligned_cols=176 Identities=22% Similarity=0.303 Sum_probs=142.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||||.+++....+..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 167 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc
Confidence 46899999996422347999999999999999999999999 9999999999999999999999999987654432
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+..++..+.++
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~l 242 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-----YRMVRPDNCPEELYQL 242 (279)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHH
T ss_pred cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-----cCCCCcccccHHHHHH
Confidence 2345778999999988888999999999999999999 88777654332221111111 1122334556889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+.+||+.||++|||+.++++.|+.+...
T Consensus 243 i~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 243 MRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999988654
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=245.46 Aligned_cols=177 Identities=23% Similarity=0.252 Sum_probs=132.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 173 ~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 250 (373)
T 3c1x_A 173 MKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 250 (373)
T ss_dssp CTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred CCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeeccccccccccccccc
Confidence 578999999953 4567999999999999999999999999 999999999999999999999999998755322
Q ss_pred ---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcC-CCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 76 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
....+|..|+|||++.+..++.++||||||+++|||++| ..|+.............. ......+..++..+
T Consensus 251 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~-----~~~~~~p~~~~~~l 325 (373)
T 3c1x_A 251 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-----GRRLLQPEYCPDPL 325 (373)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHT-----TCCCCCCTTCCHHH
T ss_pred cccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHH
Confidence 123456789999999988899999999999999999995 444443211111100000 01112234566789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
.+++.+||+.||++|||+.++++.|+.+.....
T Consensus 326 ~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 326 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999998876543
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=236.61 Aligned_cols=176 Identities=23% Similarity=0.260 Sum_probs=138.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++|||.+++.. ....+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 186 (298)
T 3f66_A 109 MKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 186 (298)
T ss_dssp CTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC
T ss_pred CCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccchhcc
Confidence 478999999963 4567999999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCC-cchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 76 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
....+|..|+|||.+.+..++.++||||||+++|+|++|..|+. .............. .....+..++..+
T Consensus 187 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l 261 (298)
T 3f66_A 187 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-----RRLLQPEYCPDPL 261 (298)
T ss_dssp -----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT-----CCCCCCTTCCHHH
T ss_pred ccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC-----CCCCCCccCCHHH
Confidence 22346778999999998889999999999999999999655443 22111111111111 1112233455789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 152 VRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 262 ~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 262 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999886654
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=240.21 Aligned_cols=175 Identities=20% Similarity=0.271 Sum_probs=140.9
Q ss_pred CCCccHHhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC
Q 018348 1 MPNETLAKHLFHWET----------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 58 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~ 58 (357)
++||+|.+++..... ..+++..++.++.||+.||.|||+.+ ++||||||+||+++.+
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NIli~~~ 186 (314)
T 2ivs_A 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNILVAEG 186 (314)
T ss_dssp CTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETT
T ss_pred cCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheEEEcCC
Confidence 468999999975322 34899999999999999999999999 9999999999999999
Q ss_pred CCeEEecCCCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccc
Q 018348 59 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 131 (357)
Q Consensus 59 ~~~kl~dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~ 131 (357)
+.+||+|||+++...... ...+|..|+|||.+.+..++.++||||||+++|+|++ |..|+.............
T Consensus 187 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 266 (314)
T 2ivs_A 187 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266 (314)
T ss_dssp TEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred CCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhh
Confidence 999999999987654332 2345778999999998889999999999999999999 888876543322211111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
. ......+..+++.+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 267 ~-----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 267 T-----GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp T-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c-----CCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1 11123344566889999999999999999999999999987753
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=240.07 Aligned_cols=169 Identities=17% Similarity=0.182 Sum_probs=135.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC----CeEEecCCCccccCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~----~~kl~dfg~~~~~~~~- 75 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||+++.....
T Consensus 96 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~ 172 (326)
T 2y0a_A 96 VAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172 (326)
T ss_dssp CCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS
T ss_pred CCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC
Confidence 47899999996 4568999999999999999999999999 99999999999998877 7999999998876433
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....||+.|+|||++.+..++.++||||||+++|+|++|..||................. .........++..+.+
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 250 (326)
T 2y0a_A 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSALAKD 250 (326)
T ss_dssp CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC--CCCHHHHTTSCHHHHH
T ss_pred ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC--CcCccccccCCHHHHH
Confidence 345689999999999988899999999999999999999998865433222111111000 0011111234578999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++.+||+.||.+|||+.++++
T Consensus 251 li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 251 FIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHhc
Confidence 999999999999999999987
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=237.98 Aligned_cols=178 Identities=18% Similarity=0.208 Sum_probs=145.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 91 AGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp CTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 468999999953 4567999999999999999999999999 9999999999999999999999999987664332
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...+|..|+|||++.+..++.++||||||+++|+|++ |..||............... .....+..+++.+.
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~ 243 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-----KRMECPPECPPELY 243 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT-----CCCCCCTTCCHHHH
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcC-----CcCCCCCCcCHHHH
Confidence 2345788999999988889999999999999999998 98887654332221111111 11233455678999
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccccCCCC
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~ 185 (357)
+++.+||+.||.+||++.++++.|+.+..+...
T Consensus 244 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 244 ALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999998776544
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-32 Score=239.85 Aligned_cols=179 Identities=14% Similarity=0.159 Sum_probs=140.2
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee---CCCCCeEEecCCCccccCCC----
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill---~~~~~~kl~dfg~~~~~~~~---- 75 (357)
+|+|.+++.. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 165 (296)
T 4hgt_A 88 GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCc
Confidence 7899999963 3567999999999999999999999999 9999999999999 78899999999998765432
Q ss_pred -------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccccccccc---CCCCc
Q 018348 76 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE---GQFTD 145 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 145 (357)
....||..|+|||.+.+..++.++||||||+++|+|++|..||......... .....+...... .....
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 244 (296)
T 4hgt_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMSTPIEVLCK 244 (296)
T ss_dssp BCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHSCHHHHTT
T ss_pred cCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-hhhhhhhcccccchhhhhhc
Confidence 2346899999999999888999999999999999999999988642111000 000000000000 00112
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
.+++.+.+++.+||+.||++|||+.+|++.|+.+.....
T Consensus 245 ~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 245 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 335789999999999999999999999999998876544
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=238.55 Aligned_cols=176 Identities=21% Similarity=0.274 Sum_probs=136.8
Q ss_pred CCCccHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-
Q 018348 1 MPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~- 75 (357)
+++|+|.+++... ....+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 123 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~ 201 (313)
T 3brb_A 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201 (313)
T ss_dssp CTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCSCC-------
T ss_pred ccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecCcceeccccc
Confidence 4689999998432 3467999999999999999999999999 999999999999999999999999998765432
Q ss_pred -----CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHH
Q 018348 76 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 76 -----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
....++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+..++.
T Consensus 202 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 276 (313)
T 3brb_A 202 YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG-----HRLKQPEDCLD 276 (313)
T ss_dssp ---------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-----CCCCCBTTCCH
T ss_pred ccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC-----CCCCCCccccH
Confidence 22346778999999998889999999999999999999 77676543322221111111 11223345567
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.+.+++.+||+.||.+|||+.+++..|+.+...
T Consensus 277 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 277 ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 899999999999999999999999999887654
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=243.00 Aligned_cols=177 Identities=19% Similarity=0.259 Sum_probs=139.1
Q ss_pred CCCccHHhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC
Q 018348 1 MPNETLAKHLFHWET---------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 59 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~ 59 (357)
++||||.+++..... ..+++..++.|+.||+.||.|||+.+ ++||||||+||+++.++
T Consensus 131 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~ 209 (344)
T 1rjb_A 131 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGK 209 (344)
T ss_dssp CTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEETTT
T ss_pred CCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEEcCCC
Confidence 478999999975322 34899999999999999999999999 99999999999999999
Q ss_pred CeEEecCCCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhcccc
Q 018348 60 NPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 132 (357)
Q Consensus 60 ~~kl~dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~ 132 (357)
.+||+|||++....... ...+|+.|+|||++.+..++.++||||||+++|+|++ |..||............
T Consensus 210 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~-- 287 (344)
T 1rjb_A 210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKL-- 287 (344)
T ss_dssp EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH--
T ss_pred cEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHH--
Confidence 99999999987654332 2345778999999988889999999999999999998 88887653221111111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.........+..+++.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 288 --~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 288 --IQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp --HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred --HhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111112223445568899999999999999999999999999887654
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-31 Score=235.02 Aligned_cols=166 Identities=17% Similarity=0.220 Sum_probs=132.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++ ..+++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 120 ~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 195 (298)
T 2zv2_A 120 VNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLS 195 (298)
T ss_dssp CTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEEC
T ss_pred CCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCCEEEecCCCcccccccccccc
Confidence 4678888876 3568999999999999999999999999 999999999999999999999999998866543 2
Q ss_pred CccCCCCCCchhhhcCCC---CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~---~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...||..|+|||++.+.. .+.++||||||+++|+|++|..||................ ........+++.+.+
T Consensus 196 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~ 271 (298)
T 2zv2_A 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQA----LEFPDQPDIAEDLKD 271 (298)
T ss_dssp CCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC----CCCCSSSCCCHHHHH
T ss_pred CCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhccc----CCCCCccccCHHHHH
Confidence 456899999999998654 3778999999999999999999887643332221111111 111112345578999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++.+||+.||++|||+.+++.
T Consensus 272 li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 272 LITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHhhcChhhCCCHHHHhc
Confidence 999999999999999999864
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=235.06 Aligned_cols=174 Identities=24% Similarity=0.316 Sum_probs=141.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++|+|.+++.. ....+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 101 MANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp CTTCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred cCCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 468999999963 3467999999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....+|..|+|||++.+..++.++||||||+++|+|++ |..||............... .....+..+++.+.++
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~l 253 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKVYTI 253 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHH
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-----cCCCCCCcCCHHHHHH
Confidence 23345778999999998889999999999999999998 88887654333222221111 1122233445789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+.+||+.||.+|||+.++++.|..+..
T Consensus 254 i~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 254 MYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp HHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 999999999999999999999987653
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=256.46 Aligned_cols=178 Identities=24% Similarity=0.304 Sum_probs=145.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
|++|+|.++|....+..+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 57899999996434467999999999999999999999999 999999999999999999999999999865432
Q ss_pred CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....++..|+|||++.+..++.++||||||+++|||++ |..||.............. ..+...+..++..+.+|
T Consensus 422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~l 496 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-----GYRMPCPPECPESLHDL 496 (535)
T ss_dssp CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHH
T ss_pred cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHH
Confidence 22345778999999998889999999999999999999 8878765433222211111 11223345567889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
|.+||+.||++|||+.+|+..|+.+.....
T Consensus 497 i~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 497 MCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 999999999999999999999999876544
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-31 Score=242.54 Aligned_cols=162 Identities=22% Similarity=0.247 Sum_probs=134.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. +.+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++.... ..
T Consensus 121 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~ 197 (373)
T 2r5t_A 121 INGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTS 197 (373)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCCCccc
Confidence 57999999996 3568999999999999999999999999 99999999999999999999999999875322 23
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||+.|+|||++.+..++.++|+|||||++|||++|..||............... ...++..++..+.++|.
T Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~ 271 (373)
T 2r5t_A 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSARHLLE 271 (373)
T ss_dssp SBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS------CCCCCSSSCHHHHHHHH
T ss_pred cccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc------ccCCCCCCCHHHHHHHH
Confidence 567999999999999888999999999999999999999998765443332222111 11234456688999999
Q ss_pred HhhhcCCCCCCChhh
Q 018348 157 RCLQYEPRERPNPKS 171 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~ 171 (357)
+||+.||.+||++.+
T Consensus 272 ~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 272 GLLQKDRTKRLGAKD 286 (373)
T ss_dssp HHTCSSGGGSTTTTT
T ss_pred HHcccCHHhCCCCCC
Confidence 999999999999864
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=236.27 Aligned_cols=173 Identities=19% Similarity=0.318 Sum_probs=140.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
+++|+|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 180 (284)
T 2a19_B 102 CDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTR 180 (284)
T ss_dssp CCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCC
T ss_pred cCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcchhheeccccccccc
Confidence 46899999997545578999999999999999999999999 999999999999999999999999998766543 24
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
..||..|+|||.+.+..++.++||||||+++|+|++|..|+...... .. .+. ....+..++..+.+++.+
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-~~-----~~~----~~~~~~~~~~~~~~li~~ 250 (284)
T 2a19_B 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF-FT-----DLR----DGIISDIFDKKEKTLLQK 250 (284)
T ss_dssp CCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH-HH-----HHH----TTCCCTTSCHHHHHHHHH
T ss_pred cCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH-HH-----Hhh----cccccccCCHHHHHHHHH
Confidence 46899999999999888999999999999999999998765332111 10 011 111233345789999999
Q ss_pred hhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 158 CLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 158 cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
||+.||.+|||+.+++..|..+.....
T Consensus 251 ~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 251 LLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred HccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 999999999999999999988876543
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-32 Score=243.40 Aligned_cols=179 Identities=22% Similarity=0.318 Sum_probs=142.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++. ...+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 117 ~~~~~L~~~l~---~~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 192 (318)
T 3lxp_A 117 VPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 192 (318)
T ss_dssp CTTCBHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEE
T ss_pred ccCCcHHHHHh---hCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCccccccccccccccc
Confidence 46899999995 345999999999999999999999999 9999999999999999999999999988765432
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhh----------ccccccccccccCCC
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----------RNLQMLTDSCLEGQF 143 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 143 (357)
...+|..|+|||++.+..++.++||||||+++|+|++|..|+.......... ...............
T Consensus 193 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (318)
T 3lxp_A 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR 272 (318)
T ss_dssp C---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCC
T ss_pred cccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCC
Confidence 2346778999999998889999999999999999999998775432211100 001111111222334
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
+..++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 273 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 273 PDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 5566789999999999999999999999999999886553
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-32 Score=248.71 Aligned_cols=169 Identities=12% Similarity=0.071 Sum_probs=131.3
Q ss_pred ccHHhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-
Q 018348 4 ETLAKHLFHWETHPMKWAMR------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~------~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~- 76 (357)
|||.+++... +..+++..+ +.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++......
T Consensus 172 ~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~ 249 (371)
T 3q60_A 172 VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP 249 (371)
T ss_dssp EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE
T ss_pred CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccCcCCHHHEEECCCCCEEEEecceeeecCCCcc
Confidence 8999999642 334555556 778899999999999999 9999999999999999999999999998776554
Q ss_pred CccCCCCCCchhhhcC--CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc---cccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL---QMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l 151 (357)
...+|..|+|||++.+ ..++.++|||||||++|+|++|..||............. ...............+++.+
T Consensus 250 ~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (371)
T 3q60_A 250 ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFV 329 (371)
T ss_dssp GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHH
T ss_pred CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHH
Confidence 5567899999999987 568999999999999999999998887653221111000 11111111112223567899
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.++|.+||+.||++|||+.+++.
T Consensus 330 ~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 330 KTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp HHHHHHHTCSSTTTCCCHHHHTT
T ss_pred HHHHHHHcCCChhhCCCHHHHhc
Confidence 99999999999999999999875
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=241.06 Aligned_cols=170 Identities=16% Similarity=0.210 Sum_probs=136.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC--CCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~--~~~~kl~dfg~~~~~~~~~-- 76 (357)
++||+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 478999999953 3457999999999999999999999999 999999999999986 7899999999998765543
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...||+.|+|||++.+..++.++||||||+++|+|++|..||................... .......++..+.+++
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~li 238 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF--DEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--CHHHHTTSCHHHHHHH
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCC--ChhhhccCCHHHHHHH
Confidence 3458999999999998888999999999999999999999987654332222111111100 0001123457899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.||.+|||+.++++
T Consensus 239 ~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 239 DRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHcCCChhHCcCHHHHhc
Confidence 9999999999999999987
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=236.77 Aligned_cols=175 Identities=23% Similarity=0.339 Sum_probs=135.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
+++|||.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 175 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 175 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCCC
Confidence 46889999996433334899999999999999999999999 999999999999999999999999998765433 2345
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............. ......+..+++.+.+++.+|
T Consensus 176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~ 250 (278)
T 1byg_A 176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPAVYEVMKNC 250 (278)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-----TCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----CCCCCCcccCCHHHHHHHHHH
Confidence 7889999999998889999999999999999998 8877765432221111111 112233445668899999999
Q ss_pred hhcCCCCCCChhhHHHHhccccc
Q 018348 159 LQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
|+.||.+|||+.++++.|+.+..
T Consensus 251 l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 251 WHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCChhhCCCHHHHHHHHHHHHh
Confidence 99999999999999999988754
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=235.72 Aligned_cols=173 Identities=23% Similarity=0.272 Sum_probs=138.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 94 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 171 (281)
T 3cc6_A 94 YPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171 (281)
T ss_dssp CTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC--------
T ss_pred CCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCccccccccccc
Confidence 478999999963 3567999999999999999999999999 9999999999999999999999999987654332
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...+|..|+|||++.+..++.++||||||+++|+|++ |..|+.............. ......+..+++.+.++
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l 246 (281)
T 3cc6_A 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK-----GDRLPKPDLCPPVLYTL 246 (281)
T ss_dssp -CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH-----TCCCCCCTTCCHHHHHH
T ss_pred ccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc-----CCCCCCCCCCCHHHHHH
Confidence 2346778999999988889999999999999999998 9888754322211111100 01112234456789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
+.+||+.||++|||+.+++..|+.+.
T Consensus 247 i~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 247 MTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHccCCchhCcCHHHHHHHHHHHH
Confidence 99999999999999999999998764
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=240.80 Aligned_cols=163 Identities=20% Similarity=0.275 Sum_probs=134.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ....
T Consensus 92 ~g~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~ 168 (336)
T 3h4j_B 92 GGELFDYIV--EKKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC 168 (336)
T ss_dssp CEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCT
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCccccccc
Confidence 688999986 3568999999999999999999999999 999999999999999999999999998866543 3457
Q ss_pred CCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 80 TNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
||+.|+|||++.+..+ +.++||||||+++|+|++|..||.......... .+... ....+..+++.+.+++.+|
T Consensus 169 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~s~~~~~li~~~ 242 (336)
T 3h4j_B 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----KVNSC--VYVMPDFLSPGAQSLIRRM 242 (336)
T ss_dssp TSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC----CCCSS--CCCCCTTSCHHHHHHHHTT
T ss_pred CCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH----HHHcC--CCCCcccCCHHHHHHHHHH
Confidence 8999999999987665 689999999999999999999886543222111 11110 1123445668899999999
Q ss_pred hhcCCCCCCChhhHHH
Q 018348 159 LQYEPRERPNPKSLVT 174 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~ 174 (357)
|+.||.+|||+.++++
T Consensus 243 L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 243 IVADPMQRITIQEIRR 258 (336)
T ss_dssp SCSSGGGSCCHHHHTT
T ss_pred cCCChhHCcCHHHHHh
Confidence 9999999999999876
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-31 Score=243.28 Aligned_cols=164 Identities=17% Similarity=0.284 Sum_probs=131.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. +.+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++.... ..
T Consensus 135 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~ 211 (396)
T 4dc2_A 135 VNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 211 (396)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccCCCccc
Confidence 57999999996 3568999999999999999999999999 99999999999999999999999999875322 23
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh-----hccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-----DRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
..+||+.|+|||++.+..++.++|||||||++|||++|..||......... ......+.. ....+|..++..+
T Consensus 212 ~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~~~ 289 (396)
T 4dc2_A 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKA 289 (396)
T ss_dssp CCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTTSCHHH
T ss_pred cccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCcCCHHH
Confidence 557899999999999888999999999999999999999988532111000 000011111 1123445566889
Q ss_pred HHHHHHhhhcCCCCCCCh
Q 018348 152 VRLASRCLQYEPRERPNP 169 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~ 169 (357)
.+||.+||+.||.+||++
T Consensus 290 ~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 290 ASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHHHHTCSCTTTSTTC
T ss_pred HHHHHHHhcCCHhHcCCC
Confidence 999999999999999996
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=236.37 Aligned_cols=176 Identities=20% Similarity=0.308 Sum_probs=143.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.......+++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 46899999997656678999999999999999999999999 9999999999999999999999999988765432
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...+|..|+|||.+.+..++.++||||||+++|+|++ |..|+.............. ......+..+++.+.++
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l 244 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-----DYRMERPEGCPEKVYEL 244 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-----TCCCCCCTTCCHHHHHH
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----cCCCCCCCCCCHHHHHH
Confidence 2235778999999998889999999999999999999 8777765332222111111 11223344566889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+.+||+.||.+|||+.++++.|+.+...
T Consensus 245 i~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 245 MRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999877543
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-31 Score=248.57 Aligned_cols=165 Identities=21% Similarity=0.325 Sum_probs=137.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---- 75 (357)
++||+|.+++. ..+.+++..+..|+.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 230 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 306 (446)
T 4ejn_A 230 ANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 306 (446)
T ss_dssp CSSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCCccc
Confidence 57899999996 35689999999999999999999998 88 999999999999999999999999998764322
Q ss_pred CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++..+++.+.++|
T Consensus 307 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 380 (446)
T 4ejn_A 307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLGPEAKSLL 380 (446)
T ss_dssp CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHH
T ss_pred ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHH
Confidence 3457899999999999888999999999999999999999998765433322221111 1123445568899999
Q ss_pred HHhhhcCCCCCC-----ChhhHHH
Q 018348 156 SRCLQYEPRERP-----NPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rp-----s~~~i~~ 174 (357)
.+||+.||.+|| ++.++++
T Consensus 381 ~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 381 SGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHcccCHHHhCCCCCCCHHHHHh
Confidence 999999999999 8888876
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=258.21 Aligned_cols=176 Identities=18% Similarity=0.210 Sum_probs=142.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.++|.. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 417 ~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 417 AGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp CTTCBHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred CCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 579999999963 4567999999999999999999999999 9999999999999999999999999998764332
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...++..|+|||++.+..++.++|||||||++|||++ |..||.............. ..+...+..+++.+.
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~ 569 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-----GKRMECPPECPPELY 569 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT-----TCCCCCCTTCCHHHH
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHH
Confidence 1234678999999998899999999999999999998 9988875433322211111 112234556778999
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
+||.+||+.||++||++.+|++.|+.+....
T Consensus 570 ~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 570 ALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998876543
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-31 Score=238.03 Aligned_cols=177 Identities=20% Similarity=0.295 Sum_probs=140.5
Q ss_pred CCCccHHhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEe
Q 018348 1 MPNETLAKHLFHWET----------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 64 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~ 64 (357)
+++|||.+++..... ..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~ 187 (313)
T 1t46_A 109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKIC 187 (313)
T ss_dssp CTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEEEEC
T ss_pred CCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCCCCEEEc
Confidence 468999999975332 25999999999999999999999999 9999999999999999999999
Q ss_pred cCCCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccc
Q 018348 65 TFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDS 137 (357)
Q Consensus 65 dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 137 (357)
|||+++...... ...+|..|+|||.+.+..++.++||||||+++|+|++ |..|+.............. .
T Consensus 188 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----~ 263 (313)
T 1t46_A 188 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK----E 263 (313)
T ss_dssp CCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH----H
T ss_pred cccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhc----c
Confidence 999988665432 2345678999999988889999999999999999999 8877754322111111111 1
Q ss_pred cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 138 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
......+..++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 264 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 264 GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111222344567899999999999999999999999999887543
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=236.24 Aligned_cols=174 Identities=18% Similarity=0.223 Sum_probs=142.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~--- 77 (357)
+++|+|.+++.. .+.+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (291)
T 1xbb_A 99 AELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175 (291)
T ss_dssp CTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred CCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccc
Confidence 468999999963 567999999999999999999999999 99999999999999999999999999876644321
Q ss_pred ----ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 78 ----YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 78 ----~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
..++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+..++..+.
T Consensus 176 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~ 250 (291)
T 1xbb_A 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-----ERMGCPAGCPREMY 250 (291)
T ss_dssp C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHH
T ss_pred ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHH
Confidence 235678999999988888999999999999999999 98887654333222111111 11233445668899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+++.+||+.||.+|||+.++++.|+.+...
T Consensus 251 ~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 251 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999887654
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=240.08 Aligned_cols=169 Identities=17% Similarity=0.241 Sum_probs=135.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC---CCeEEecCCCccccCCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~---~~~kl~dfg~~~~~~~~~- 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+||+++.+ +.+||+|||++.......
T Consensus 110 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 110 VTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp CCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 47899999996 4568999999999999999999999999 9999999999999754 459999999988765433
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.................. ........+++.+.++
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~l 264 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKSL 264 (362)
T ss_dssp CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTGGGGSCHHHHHH
T ss_pred cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHHH
Confidence 357899999999999888999999999999999999999988765433222111111110 0111123456789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
|.+||+.||.+|||+.+++.
T Consensus 265 i~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 265 IDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp HHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHcCCChhhCcCHHHHhc
Confidence 99999999999999998875
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=232.08 Aligned_cols=174 Identities=19% Similarity=0.284 Sum_probs=140.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++.. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 85 MEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp CTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 468999999964 3467999999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....++..|+|||++.+..++.++||||||+++|+|++ |..|+............... .....+..++..+.++
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~l 237 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQI 237 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHH
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-----CcCCCCccCcHHHHHH
Confidence 23346778999999998889999999999999999999 78777654332221111111 1112233455789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+.+||+.||.+|||+.+++..|+.+..
T Consensus 238 i~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 238 MNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999987754
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-31 Score=238.26 Aligned_cols=178 Identities=20% Similarity=0.270 Sum_probs=142.2
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
+++|||.+++.... ...+++..++.|+.||+.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEEEccc
Confidence 46899999996432 247999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCC---CCCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCC
Q 018348 67 GLMKNSRD---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 67 g~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
|+++.... .....++..|+|||++.+..++.++||||||+++|+|++ |..||............... ....
T Consensus 187 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~-----~~~~ 261 (327)
T 1fvr_A 187 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-----YRLE 261 (327)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-----CCCC
T ss_pred CcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC-----CCCC
Confidence 99874332 223356788999999988888999999999999999998 98888654433322221111 1122
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
.+..++..+.+++.+||+.||.+|||+.+++..|+.+.....
T Consensus 262 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 262 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 344566889999999999999999999999999988876543
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-31 Score=235.27 Aligned_cols=177 Identities=27% Similarity=0.475 Sum_probs=140.1
Q ss_pred CCCccHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----
Q 018348 1 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---- 75 (357)
++||+|.+++.... ..++++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 190 (307)
T 2nru_A 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190 (307)
T ss_dssp CTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred cCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence 47899999996432 457999999999999999999999999 999999999999999999999999998765432
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH----hhh------ccccccccccccCCC
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IRD------RNLQMLTDSCLEGQF 143 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~----~~~------~~~~~~~~~~~~~~~ 143 (357)
....||..|+|||.+.+ .++.++||||||+++|+|++|..|+....... +.. .......+.. ....
T Consensus 191 ~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 268 (307)
T 2nru_A 191 MTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKK-MNDA 268 (307)
T ss_dssp ECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSS-CSCC
T ss_pred cccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccc-cccc
Confidence 23468999999999874 57899999999999999999998876432110 000 0001111111 1234
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
+..++..+.+++.+||+.||.+|||+.+|++.|+.+.
T Consensus 269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 5566788999999999999999999999999998775
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=252.59 Aligned_cols=172 Identities=15% Similarity=0.183 Sum_probs=138.2
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee---CCCCCeEEecCCCccccCCCC---
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK--- 76 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill---~~~~~~kl~dfg~~~~~~~~~--- 76 (357)
+|+|.+++.. ..+.+++.+++.|+.||+.||.|||+.+ |+||||||+|||| +.++.+||+|||+++......
T Consensus 86 g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (483)
T 3sv0_A 86 GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163 (483)
T ss_dssp CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence 7899999963 3568999999999999999999999999 9999999999999 578999999999987654322
Q ss_pred --------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh-------HHhhhccccccccccccC
Q 018348 77 --------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNLQMLTDSCLEG 141 (357)
Q Consensus 77 --------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 141 (357)
...||..|+|||++.+..++.++|||||||++|||++|..||..... ..+..........
T Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~----- 238 (483)
T 3sv0_A 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE----- 238 (483)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH-----
T ss_pred ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH-----
Confidence 45689999999999988899999999999999999999998865321 1111111101000
Q ss_pred CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 142 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
.....++.++.+++.+||+.+|++||++.+|++.|+.+..
T Consensus 239 ~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 239 ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 0112334789999999999999999999999999987744
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=240.97 Aligned_cols=167 Identities=22% Similarity=0.331 Sum_probs=130.2
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-----
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 76 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----- 76 (357)
.+|+|.+++.. .+.+++.++..|+.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 91 ~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~ 166 (343)
T 3dbq_A 91 GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVK 166 (343)
T ss_dssp CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC---------
T ss_pred CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCcccccccC
Confidence 57899999973 568999999999999999999999999 99999999999997 6789999999998664332
Q ss_pred -CccCCCCCCchhhhcC-----------CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCC
Q 018348 77 -SYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 144 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~-----------~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (357)
...||+.|+|||++.+ ..++.++||||||+++|+|++|..||......... .............+
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~ 243 (343)
T 3dbq_A 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHEIEFP 243 (343)
T ss_dssp ---CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHCTTSCCCCC
T ss_pred CCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH---HHHHhcCCcccCCc
Confidence 3468999999999864 56788999999999999999999888643221110 11111222223344
Q ss_pred chhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 145 DDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 145 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
...+..+.+++.+||+.||.+|||+.+++..
T Consensus 244 ~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 244 DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 4455789999999999999999999999863
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=242.88 Aligned_cols=172 Identities=19% Similarity=0.144 Sum_probs=124.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC--eEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--PRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~--~kl~dfg~~~~~~~~--- 75 (357)
++||+|.+++. ..+.+++..+..|+.|++.||.|||+.+ ++||||||+||+++.++. +||+|||+++.....
T Consensus 98 ~~~~~L~~~l~--~~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~ 174 (361)
T 3uc3_A 98 ASGGELYERIC--NAGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 174 (361)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCC
Confidence 47899999996 3567999999999999999999999999 999999999999987665 999999998743322
Q ss_pred CCccCCCCCCchhhhcCCCCCCc-ccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPE-SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~-~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....||+.|+|||++.+..++.+ +||||||+++|+|++|+.||...............+............+++.+.++
T Consensus 175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 254 (361)
T 3uc3_A 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHL 254 (361)
T ss_dssp ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHH
T ss_pred CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHH
Confidence 34578999999999987776554 99999999999999999988653221110111111111111111122345789999
Q ss_pred HHHhhhcCCCCCCChhhHHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~ 175 (357)
|.+||+.||.+|||+.+++..
T Consensus 255 i~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 255 ISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHccCChhHCcCHHHHHhC
Confidence 999999999999999999863
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-31 Score=238.62 Aligned_cols=176 Identities=21% Similarity=0.296 Sum_probs=141.5
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 123 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Df 201 (334)
T 2pvf_A 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADF 201 (334)
T ss_dssp CTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCC
T ss_pred CCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCCCCEEEccc
Confidence 46899999997532 134899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...+|..|+|||++.+..++.++||||||+++|+|++ |..|+............... .
T Consensus 202 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-----~ 276 (334)
T 2pvf_A 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-----H 276 (334)
T ss_dssp TTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-----C
T ss_pred cccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcC-----C
Confidence 9987654432 2345778999999988889999999999999999999 88887654333221111111 1
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
....+..++..+.+++.+||+.||.+|||+.+++..|+.+...
T Consensus 277 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1223445668899999999999999999999999999988654
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=238.29 Aligned_cols=161 Identities=19% Similarity=0.261 Sum_probs=129.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++.. .+..+++..+..|+.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....
T Consensus 140 ~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 217 (311)
T 3p1a_A 140 GPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE 217 (311)
T ss_dssp CCBHHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------CCC
T ss_pred CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccC
Confidence 6789998864 3567999999999999999999999999 999999999999999999999999998766543 2346
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh-HHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
||..|+|||++.+ .++.++||||||+++|||++|..++..... ..+.. ....+ ..+..+++.+.+++.+|
T Consensus 218 gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~l~~li~~~ 288 (311)
T 3p1a_A 218 GDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ----GYLPP----EFTAGLSSELRSVLVMM 288 (311)
T ss_dssp CCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTT----TCCCH----HHHTTSCHHHHHHHHHH
T ss_pred CCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhc----cCCCc----ccccCCCHHHHHHHHHH
Confidence 8999999999885 789999999999999999999766554322 11111 11111 12233457899999999
Q ss_pred hhcCCCCCCChhhHHH
Q 018348 159 LQYEPRERPNPKSLVT 174 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~ 174 (357)
|+.||++|||+.++++
T Consensus 289 L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 289 LEPDPKLRATAEALLA 304 (311)
T ss_dssp SCSSTTTSCCHHHHHT
T ss_pred cCCChhhCcCHHHHHh
Confidence 9999999999999986
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=239.13 Aligned_cols=178 Identities=19% Similarity=0.329 Sum_probs=139.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|||.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 107 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 184 (302)
T 4e5w_A 107 LPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYT 184 (302)
T ss_dssp CTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEE
T ss_pred CCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCCCccee
Confidence 468999999953 3567999999999999999999999999 9999999999999999999999999987665432
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhh----------ccccccccccccCCC
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----------RNLQMLTDSCLEGQF 143 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 143 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..|+.......... ...............
T Consensus 185 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (302)
T 4e5w_A 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC 264 (302)
T ss_dssp CCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCC
T ss_pred ccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCC
Confidence 3346778999999998889999999999999999999987643321110000 000001111112234
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
+..+++.+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 265 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 265 PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 4566789999999999999999999999999998653
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=245.79 Aligned_cols=165 Identities=19% Similarity=0.283 Sum_probs=136.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
++||+|.+++. +.+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 98 ~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~ 174 (476)
T 2y94_A 98 VSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 174 (476)
T ss_dssp CSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhccccccccc
Confidence 47899999996 4568999999999999999999999999 999999999999999999999999999876543 34
Q ss_pred ccCCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
..||+.|+|||++.+..+ +.++|||||||++|+|++|..||................ ...+..+++.+.+++.
T Consensus 175 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~Li~ 248 (476)
T 2y94_A 175 SCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI------FYTPQYLNPSVISLLK 248 (476)
T ss_dssp CCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC------CCCCTTCCHHHHHHHH
T ss_pred cCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------cCCCccCCHHHHHHHH
Confidence 578999999999987665 689999999999999999999987654332222211111 1123345578999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||.+|||+.+|+.
T Consensus 249 ~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 249 HMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHTCSSTTTSCCHHHHHT
T ss_pred HHcCCCchhCcCHHHHHh
Confidence 999999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=233.70 Aligned_cols=177 Identities=19% Similarity=0.265 Sum_probs=133.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++ ++.+||+|||+++.....
T Consensus 111 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~ 187 (319)
T 2y4i_B 111 CKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR 187 (319)
T ss_dssp CCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred ccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCcccccccccccc
Confidence 468999999953 3457999999999999999999999999 99999999999998 789999999987654211
Q ss_pred ----CCccCCCCCCchhhhcC---------CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCC
Q 018348 76 ----KSYSTNLAFTPPEYLRT---------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 76 ----~~~~gt~~y~aPE~~~~---------~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
....||..|+|||.+.+ ..++.++||||||+++|+|++|..||................... .
T Consensus 188 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~----~ 263 (319)
T 2y4i_B 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN----L 263 (319)
T ss_dssp CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC----C
T ss_pred ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCC----C
Confidence 12347899999999874 346889999999999999999998887654332222111111111 1
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCCC
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~~ 184 (357)
.+..++..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 264 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 264 SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 122344679999999999999999999999999999976643
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=238.47 Aligned_cols=164 Identities=17% Similarity=0.296 Sum_probs=130.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.+++. +.+.+++..+..++.||+.||.|||+.+ |+||||||+||+++.+|.+||+|||+++.... ..
T Consensus 92 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~ 168 (345)
T 3a8x_A 92 VNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 168 (345)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBC
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCCCccc
Confidence 57899999996 3467999999999999999999999999 99999999999999999999999999875322 23
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH-----hhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...||+.|+|||++.+..++.++|||||||++|||++|..||....... ........+... ...+|...+..+
T Consensus 169 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~ 246 (345)
T 3a8x_A 169 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKA 246 (345)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTSCHHH
T ss_pred ccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCCCHHH
Confidence 4578999999999998889999999999999999999998885311100 000000011111 122344566889
Q ss_pred HHHHHHhhhcCCCCCCCh
Q 018348 152 VRLASRCLQYEPRERPNP 169 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~ 169 (357)
.+++.+||+.||.+||++
T Consensus 247 ~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 247 ASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHHHHHTCSSTTTSTTC
T ss_pred HHHHHHHhcCCHhHCCCC
Confidence 999999999999999996
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=236.14 Aligned_cols=178 Identities=12% Similarity=0.097 Sum_probs=137.8
Q ss_pred CCCccHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee----CCCCCeEEecCCCccccCCC
Q 018348 1 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill----~~~~~~kl~dfg~~~~~~~~ 75 (357)
++||+|.+++.... ...+++..++.|+.|++.||.|||+.+ ++||||||+||++ +.++.+||+|||+++.....
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp CTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 46899999996432 234999999999999999999999999 9999999999999 77788999999999876544
Q ss_pred C---CccCCCCCCchhhhc--------CCCCCCcccchhHHHHHHHHHcCCCCCCcchhH----Hhhhccccccc-----
Q 018348 76 K---SYSTNLAFTPPEYLR--------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD----LIRDRNLQMLT----- 135 (357)
Q Consensus 76 ~---~~~gt~~y~aPE~~~--------~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~----~~~~~~~~~~~----- 135 (357)
. ...||..|+|||++. +..++.++||||||+++|+|++|..||...... ...........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCE
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccch
Confidence 3 446899999999986 467899999999999999999999887532110 00000000000
Q ss_pred --------------cccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 136 --------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 136 --------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
........+...+..+.+++.+||+.||++|||+.++++.....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 00111234456778899999999999999999999999876544
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=238.42 Aligned_cols=175 Identities=17% Similarity=0.272 Sum_probs=131.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+++++..++.|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 98 ~~g~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 174 (311)
T 3ork_A 98 VDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174 (311)
T ss_dssp CCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC-----------
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccc
Confidence 46899999996 3468999999999999999999999999 999999999999999999999999998765432
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||..................+ .......++..+.+
T Consensus 175 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~ 252 (311)
T 3ork_A 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP--PSARHEGLSADLDA 252 (311)
T ss_dssp -------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC--HHHHSTTCCHHHHH
T ss_pred cccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC--cccccCCCCHHHHH
Confidence 12458999999999998889999999999999999999999987654332221111111100 00112234578999
Q ss_pred HHHHhhhcCCCCCCChhh-HHHHhcccc
Q 018348 154 LASRCLQYEPRERPNPKS-LVTALSPLQ 180 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~-i~~~L~~~~ 180 (357)
++.+||+.||.+||+..+ +...|..+.
T Consensus 253 li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 253 VVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp HHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred HHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 999999999999997665 445555443
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-31 Score=242.77 Aligned_cols=167 Identities=22% Similarity=0.327 Sum_probs=130.3
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC------
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------ 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------ 75 (357)
.+|+|.++|.. .+.+++..+..|+.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 138 ~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~ 213 (390)
T 2zmd_A 138 GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVK 213 (390)
T ss_dssp CSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC---------
T ss_pred CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccC
Confidence 57899999974 458999999999999999999999999 99999999999996 688999999999876433
Q ss_pred CCccCCCCCCchhhhcC-----------CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCC
Q 018348 76 KSYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 144 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~-----------~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||........ ....+.........+
T Consensus 214 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~ 290 (390)
T 2zmd_A 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEIEFP 290 (390)
T ss_dssp CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHCTTSCCCCC
T ss_pred CCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH---HHHHHhCccccCCCC
Confidence 23568999999999875 3578899999999999999999998865321110 011111122222333
Q ss_pred chhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 145 DDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 145 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
...+..+.++|.+||+.||.+|||+.+++..
T Consensus 291 ~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 291 DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 3445789999999999999999999999863
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=238.44 Aligned_cols=169 Identities=20% Similarity=0.247 Sum_probs=128.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC---CCCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~---~~~~kl~dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++. ++.+||+|||+++.....
T Consensus 130 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 206 (349)
T 2w4o_A 130 VTGGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206 (349)
T ss_dssp CCSCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence 47899999996 4567999999999999999999999999 999999999999975 889999999998765443
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH-hhhccccccccccccCCCCchhHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....||+.|+|||++.+..++.++|||||||++|+|++|..||....... ......... ..........++..+.+
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~ 284 (349)
T 2w4o_A 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE--YYFISPWWDEVSLNAKD 284 (349)
T ss_dssp ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC--CCCCTTTTTTSCHHHHH
T ss_pred cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC--CccCCchhhhCCHHHHH
Confidence 24568999999999998889999999999999999999998886543221 111111100 01111223345678999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++.+||+.||++|||+.++++
T Consensus 285 li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 285 LVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHccCChhhCcCHHHHhc
Confidence 999999999999999999986
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=239.58 Aligned_cols=168 Identities=17% Similarity=0.240 Sum_probs=133.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
++||+|.+++. ..+.+++..+..|+.||+.||.|||+.+ |+||||||+||+++.+|.+||+|||+++..... ..
T Consensus 97 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 173 (384)
T 4fr4_A 97 LLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT 173 (384)
T ss_dssp CTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCCceec
Confidence 57999999996 4568999999999999999999999999 999999999999999999999999999876543 35
Q ss_pred ccCCCCCCchhhhcC---CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
..||+.|+|||++.. ..++.++|||||||++|+|++|..||........... ...+. .....++..++..+.++
T Consensus 174 ~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~-~~~~~--~~~~~~p~~~s~~~~~l 250 (384)
T 4fr4_A 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI-VHTFE--TTVVTYPSAWSQEMVSL 250 (384)
T ss_dssp CCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHH-HHHHH--HCCCCCCTTSCHHHHHH
T ss_pred cCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHH-HHHHh--hcccCCCCcCCHHHHHH
Confidence 578999999999974 3588999999999999999999998864321110000 00000 01123445566889999
Q ss_pred HHHhhhcCCCCCCC-hhhHHH
Q 018348 155 ASRCLQYEPRERPN-PKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps-~~~i~~ 174 (357)
|.+||+.||.+||+ +.+|..
T Consensus 251 i~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 251 LKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHHSCSSGGGSCCSHHHHHT
T ss_pred HHHHhcCCHhHhcccHHHHHc
Confidence 99999999999998 666654
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=230.71 Aligned_cols=166 Identities=22% Similarity=0.336 Sum_probs=134.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CCc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~~ 78 (357)
+++|+|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ...
T Consensus 91 ~~~~~l~~~l~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 167 (279)
T 3fdn_A 91 APLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 167 (279)
T ss_dssp CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC--------
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCccccccc
Confidence 46899999996 3467999999999999999999999999 999999999999999999999999987654433 345
Q ss_pred cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 79 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
.||..|+|||++.+..++.++||||||+++|+|++|..||.............. .....+..++..+.+++.+|
T Consensus 168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~ 241 (279)
T 3fdn_A 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARDLISRL 241 (279)
T ss_dssp CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH------TCCCCCTTSCHHHHHHHHHH
T ss_pred CCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh------CCCCCCCcCCHHHHHHHHHH
Confidence 689999999999988889999999999999999999998876443322211111 11123344567899999999
Q ss_pred hhcCCCCCCChhhHHHH
Q 018348 159 LQYEPRERPNPKSLVTA 175 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~~ 175 (357)
|+.||.+|||+.++++.
T Consensus 242 l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 242 LKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCSSGGGSCCHHHHHHC
T ss_pred hccChhhCCCHHHHhhC
Confidence 99999999999999873
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=241.78 Aligned_cols=174 Identities=19% Similarity=0.207 Sum_probs=132.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC------
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~------ 74 (357)
++||+|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||.+.....
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~ 186 (389)
T 3gni_B 108 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR 186 (389)
T ss_dssp CTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECS
T ss_pred cCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeecccccccc
Confidence 57899999997655678999999999999999999999999 99999999999999999999999998654321
Q ss_pred -----CCCccCCCCCCchhhhcC--CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccc------------
Q 018348 75 -----GKSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT------------ 135 (357)
Q Consensus 75 -----~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~------------ 135 (357)
.....||..|+|||++.+ ..++.++|||||||++|+|++|..||.................
T Consensus 187 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (389)
T 3gni_B 187 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 266 (389)
T ss_dssp CBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------------
T ss_pred ccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccc
Confidence 122367889999999987 5689999999999999999999998865321111100000000
Q ss_pred ----------------------------cccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 136 ----------------------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 136 ----------------------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
........+..+++.+.+||.+||+.||++|||+.++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 267 ELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000011233456789999999999999999999999853
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=236.74 Aligned_cols=171 Identities=12% Similarity=0.141 Sum_probs=135.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC---CCCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~---~~~~kl~dfg~~~~~~~~-- 75 (357)
++||+|.+++.....+.+++..+..|+.|++.||.|||+.+ ++||||||+||+++. ++.+||+|||+++.....
T Consensus 111 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 189 (327)
T 3lm5_A 111 AAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE 189 (327)
T ss_dssp CTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc
Confidence 57899999997555678999999999999999999999999 999999999999987 789999999999876543
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....||+.|+|||++.+..++.++||||||+++|+|++|..||................. .........++..+.++
T Consensus 190 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~l 267 (327)
T 3lm5_A 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV--DYSEETFSSVSQLATDF 267 (327)
T ss_dssp ----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTTTTTSCHHHHHH
T ss_pred cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccc--ccCchhhcccCHHHHHH
Confidence 235689999999999988899999999999999999999998866443322111111111 11122233456789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+||+.||.+|||+.++++
T Consensus 268 i~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 268 IQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHcCCChhhCcCHHHHhC
Confidence 99999999999999999876
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=255.81 Aligned_cols=160 Identities=19% Similarity=0.300 Sum_probs=135.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC----CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~----~~ 76 (357)
++||+|.++|.. .+.+++..+..|+.||+.||.|||+.+ |+||||||+||||+.+|.+||+|||+++.... ..
T Consensus 424 ~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~ 500 (674)
T 3pfq_A 424 VNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 500 (674)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBC
T ss_pred cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccCCcccc
Confidence 579999999963 468999999999999999999999999 99999999999999999999999999885332 23
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||+.|+|||++.+..++.++||||||+++|||++|..||.......+....... ...+|..++.++.+||.
T Consensus 501 ~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 574 (674)
T 3pfq_A 501 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAVAICK 574 (674)
T ss_dssp CCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS------CCCCCTTSCHHHHHHHH
T ss_pred cccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHH
Confidence 467999999999999889999999999999999999999998775444333222221 12344556789999999
Q ss_pred HhhhcCCCCCCCh
Q 018348 157 RCLQYEPRERPNP 169 (357)
Q Consensus 157 ~cl~~~p~~Rps~ 169 (357)
+||+.||.+||++
T Consensus 575 ~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 575 GLMTKHPGKRLGC 587 (674)
T ss_dssp HHSCSSSTTCTTC
T ss_pred HHccCCHHHCCCC
Confidence 9999999999998
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=240.64 Aligned_cols=170 Identities=16% Similarity=0.160 Sum_probs=136.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC--CCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~--~~~~kl~dfg~~~~~~~~~-- 76 (357)
++||+|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 130 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 578999999953 3457999999999999999999999999 999999999999974 5789999999998765443
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...||..|+|||++.+..++.++|||||||++|+|++|..||............... ...........+++.+.++|
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li 285 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC--DWEFDEDAFSSVSPEAKDFI 285 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHC--CCCCCSSTTTTSCHHHHHHH
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccccccCCHHHHHHH
Confidence 346899999999999888999999999999999999999988764332211111110 00111222334567899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.||.+|||+.++++
T Consensus 286 ~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 286 KNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp HTTSCSSGGGSCCHHHHHT
T ss_pred HHHcCCChhHCcCHHHHhh
Confidence 9999999999999999986
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-31 Score=258.57 Aligned_cols=172 Identities=19% Similarity=0.223 Sum_probs=140.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
|+||+|.++|. ..+.+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 451 ~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 451 AELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp CTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred cCCCCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 57999999996 4568999999999999999999999999 9999999999999999999999999988654332
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...+|..|+|||++.+..++.++||||||+++|||++ |..||............... .....+..++..+.
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~-----~~~~~p~~~~~~l~ 602 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-----ERMGCPAGCPREMY 602 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHH
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHH
Confidence 2235678999999998899999999999999999998 99888765433322211111 12234456678999
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
+||.+||+.||++||++.+|+..|+.+.
T Consensus 603 ~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 603 DLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 9999999999999999999999998764
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-31 Score=237.73 Aligned_cols=169 Identities=17% Similarity=0.177 Sum_probs=133.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ....+++..+..|+.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 87 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 47899999996 4567999999999999999999999999 999999999999999999999999998754321
Q ss_pred -CCccCCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....||..|+|||++.+..+ +.++||||||+++|+|++|..||.............. ...........++..+.+
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 240 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK---EKKTYLNPWKKIDSAPLA 240 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH---TTCTTSTTGGGSCHHHHH
T ss_pred cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh---cccccCCccccCCHHHHH
Confidence 24568999999999987665 7799999999999999999998864322110000000 000011112345578899
Q ss_pred HHHHhhhcCCCCCCChhhHHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~ 175 (357)
++.+||+.||++|||+.++++.
T Consensus 241 li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 241 LLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHccCChhhCcCHHHHhhC
Confidence 9999999999999999998763
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=235.20 Aligned_cols=165 Identities=19% Similarity=0.264 Sum_probs=131.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.+|.+||+|||+++..... .
T Consensus 103 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 179 (327)
T 3a62_A 103 LSGGELFMQLE--REGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179 (327)
T ss_dssp CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC----------C
T ss_pred CCCCcHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCcccccccCCcccc
Confidence 47899999996 3567999999999999999999999999 999999999999999999999999998754322 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..||............... ....+..++..+.+++.
T Consensus 180 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 253 (327)
T 3a62_A 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC------KLNLPPYLTQEARDLLK 253 (327)
T ss_dssp TTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT------CCCCCTTSCHHHHHHHH
T ss_pred ccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHH
Confidence 456899999999999888999999999999999999999998765433222111111 11234445678999999
Q ss_pred HhhhcCCCCCC-----ChhhHHH
Q 018348 157 RCLQYEPRERP-----NPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rp-----s~~~i~~ 174 (357)
+||+.||.+|| ++.+++.
T Consensus 254 ~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 254 KLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHhcCHhhccCCCCCCHHHHHc
Confidence 99999999999 5556654
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-31 Score=239.32 Aligned_cols=179 Identities=13% Similarity=0.166 Sum_probs=137.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--------SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH--------~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
+++|||.+++. ...+++..++.++.|++.||.||| +.+ ++||||||+||+++.++.+||+|||++...
T Consensus 122 ~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 197 (342)
T 1b6c_B 122 HEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRH 197 (342)
T ss_dssp CTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCcHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCceec
Confidence 46899999995 357999999999999999999999 788 999999999999999999999999998765
Q ss_pred CCC--------CCccCCCCCCchhhhcCC------CCCCcccchhHHHHHHHHHcC----------CCCCCcch-----h
Q 018348 73 RDG--------KSYSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSG----------KHIPPSHA-----L 123 (357)
Q Consensus 73 ~~~--------~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~vl~el~~g----------~~~~~~~~-----~ 123 (357)
... ....||..|+|||++.+. .++.++||||||+++|+|++| ..|+.... .
T Consensus 198 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~ 277 (342)
T 1b6c_B 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 277 (342)
T ss_dssp ETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccH
Confidence 432 234689999999999865 234689999999999999999 55554321 1
Q ss_pred HHhhhccccccccccccCC-CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 124 DLIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
..+..........+..... .+..++..+.+++.+||+.||++|||+.+|++.|+.+....
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 278 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 1111111111111111111 12356778999999999999999999999999999886553
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=237.90 Aligned_cols=167 Identities=19% Similarity=0.193 Sum_probs=134.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccCCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 82 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~gt~ 82 (357)
.|+|.+++.. ...++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.........||+
T Consensus 137 ~g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~ 214 (348)
T 1u5q_A 137 LGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTP 214 (348)
T ss_dssp SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCG
T ss_pred CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCc
Confidence 3688888743 3568999999999999999999999999 9999999999999999999999999998877777778999
Q ss_pred CCCchhhhc---CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 83 AFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 83 ~y~aPE~~~---~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
.|+|||++. .+.++.++||||||+++|||++|..|+............... ......+..++..+.++|.+||
T Consensus 215 ~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l 290 (348)
T 1u5q_A 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDSCL 290 (348)
T ss_dssp GGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCCCTTSCHHHHHHHHHHT
T ss_pred ceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHc
Confidence 999999985 457899999999999999999999887654322111111111 1111122345578999999999
Q ss_pred hcCCCCCCChhhHHHH
Q 018348 160 QYEPRERPNPKSLVTA 175 (357)
Q Consensus 160 ~~~p~~Rps~~~i~~~ 175 (357)
+.||++|||+.+++..
T Consensus 291 ~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 291 QKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CSSGGGSCCHHHHTTC
T ss_pred ccChhhCcCHHHHhhC
Confidence 9999999999998763
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-31 Score=236.78 Aligned_cols=176 Identities=18% Similarity=0.266 Sum_probs=140.1
Q ss_pred CCCccHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
++||+|.+++.... ..++++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..
T Consensus 110 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~~~~~ 188 (322)
T 1p4o_A 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188 (322)
T ss_dssp CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred CCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcccccc
Confidence 46899999996421 256799999999999999999999999 999999999999999999999999998754
Q ss_pred CCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCc
Q 018348 73 RDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145 (357)
Q Consensus 73 ~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
.... ...+|..|+|||++.+..++.++||||||+++|+|++ |..|+................ ....+.
T Consensus 189 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~ 263 (322)
T 1p4o_A 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG-----LLDKPD 263 (322)
T ss_dssp GGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC-----CCCCCT
T ss_pred ccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC-----cCCCCC
Confidence 3321 2345788999999998889999999999999999999 777765543322221111110 112234
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.++..+.+++.+||+.||.+|||+.+++..|+.+...
T Consensus 264 ~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 264 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 5567899999999999999999999999999887553
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=237.25 Aligned_cols=171 Identities=19% Similarity=0.201 Sum_probs=132.5
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-------------------------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE------------------------- 57 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~------------------------- 57 (357)
+|+|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (360)
T 3llt_A 119 GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK 197 (360)
T ss_dssp CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEES
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhcccccccccccccC
Confidence 789999997655567999999999999999999999999 999999999999975
Q ss_pred CCCeEEecCCCccccCCC-CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc---
Q 018348 58 DGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--- 133 (357)
Q Consensus 58 ~~~~kl~dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~--- 133 (357)
++.+||+|||+++..... ....||..|+|||++.+..++.++|||||||++|+|++|+.||...............
T Consensus 198 ~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 277 (360)
T 3llt_A 198 STGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQP 277 (360)
T ss_dssp CCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCC
T ss_pred CCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCC
Confidence 788999999999865543 4567899999999999888999999999999999999999988653221110000000
Q ss_pred -----------------cccccccCCCC--------------------chhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 -----------------LTDSCLEGQFT--------------------DDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 -----------------~~~~~~~~~~~--------------------~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..........+ ....+.+.+++.+||+.||.+|||+.++++
T Consensus 278 ~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 278 IPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp CCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000000 011256789999999999999999999875
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-31 Score=236.66 Aligned_cols=176 Identities=23% Similarity=0.301 Sum_probs=139.0
Q ss_pred CCCccHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
++||||.+++..... ..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Df 192 (316)
T 2xir_A 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDF 192 (316)
T ss_dssp CTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCC
T ss_pred CCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEECCC
Confidence 468999999975322 12899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++...... ...+|..|+|||++.+..++.++||||||+++|+|++ |..|+............... ..
T Consensus 193 g~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~----~~ 268 (316)
T 2xir_A 193 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE----GT 268 (316)
T ss_dssp GGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH----TC
T ss_pred ccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhcc----Cc
Confidence 9987654332 2346788999999998889999999999999999998 88777543211110000000 01
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
....+..+++.+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 269 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 269 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 112233455789999999999999999999999999987754
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-31 Score=238.05 Aligned_cols=173 Identities=15% Similarity=0.198 Sum_probs=116.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC---CCCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~---~~~~kl~dfg~~~~~~~~-- 75 (357)
++||+|.+++.......+++..+..|+.|++.||.|||+.+ ++||||||+||+++. ++.+||+|||+++.....
T Consensus 108 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~ 186 (336)
T 3fhr_A 108 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL 186 (336)
T ss_dssp CTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-----
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceecccccc
Confidence 47899999997655568999999999999999999999999 999999999999975 456999999998765543
Q ss_pred CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccccc--ccccCCCCchhHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD--SCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~ 153 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||...............+.. ..........++..+.+
T Consensus 187 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (336)
T 3fhr_A 187 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQ 266 (336)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHH
T ss_pred ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHH
Confidence 3456799999999998888899999999999999999999888654332221111111111 11111222345688999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++.+||+.||.+|||+.+++.
T Consensus 267 li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 267 LIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp HHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHCCCChhHCcCHHHHhc
Confidence 999999999999999999987
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-31 Score=240.44 Aligned_cols=176 Identities=18% Similarity=0.248 Sum_probs=137.9
Q ss_pred CCCccHHhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCC
Q 018348 1 MPNETLAKHLFHWE------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 68 (357)
Q Consensus 1 ~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~ 68 (357)
+++|||.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 132 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 210 (333)
T 2i1m_A 132 CCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGL 210 (333)
T ss_dssp CTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEEEBCCCGG
T ss_pred CCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeEEECcccc
Confidence 46899999996421 356899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccC
Q 018348 69 MKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 141 (357)
Q Consensus 69 ~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
++...... ...+|..|+|||++.+..++.++||||||+++|+|++ |..|+........... ........
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~----~~~~~~~~ 286 (333)
T 2i1m_A 211 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK----LVKDGYQM 286 (333)
T ss_dssp GCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHH----HHHHTCCC
T ss_pred ccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHH----HHhcCCCC
Confidence 87653322 2345778999999998889999999999999999998 7777754321111000 11111112
Q ss_pred CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 142 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
..+..++..+.+++.+||+.||.+|||+.+|++.|+.+..
T Consensus 287 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 287 AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 2233455789999999999999999999999999987643
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-30 Score=232.74 Aligned_cols=176 Identities=20% Similarity=0.254 Sum_probs=139.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 179 (291)
T 1u46_A 102 APLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179 (291)
T ss_dssp CTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEE
T ss_pred ccCCCHHHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEccccccccccccccchh
Confidence 468999999964 3467999999999999999999999999 9999999999999999999999999987664432
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...+|..|+|||++.+..++.++||||||+++|+|++ |..|+............... ......+..++..+.
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~ 255 (291)
T 1u46_A 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE----GERLPRPEDCPQDIY 255 (291)
T ss_dssp C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS----CCCCCCCTTCCHHHH
T ss_pred hhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc----CCCCCCCcCcCHHHH
Confidence 2346778999999988888999999999999999999 88887654333222111111 111123345568899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+++.+||+.||.+|||+.++++.|+.+...
T Consensus 256 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 256 NVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 999999999999999999999999877543
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-30 Score=230.34 Aligned_cols=164 Identities=16% Similarity=0.202 Sum_probs=132.9
Q ss_pred CCCccHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC-------------------C
Q 018348 1 MPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-------------------G 59 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~-------------------~ 59 (357)
++||||.+++.... .+.+++..+..|+.||+.||.|||+.+ ++||||||+||+++.+ +
T Consensus 93 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 93 CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------CC
T ss_pred cCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 47899999996432 267999999999999999999999999 9999999999999844 4
Q ss_pred CeEEecCCCccccCCCCCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchh-HHhhhccccccccc
Q 018348 60 NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDS 137 (357)
Q Consensus 60 ~~kl~dfg~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~-~~~~~~~~~~~~~~ 137 (357)
.+||+|||++..........||..|+|||.+.+. .++.++||||||+++++|++|..++..... .......
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~------- 244 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQGR------- 244 (289)
T ss_dssp CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTTC-------
T ss_pred EEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcCC-------
Confidence 7999999999887777777899999999999865 566899999999999999999866543321 1111111
Q ss_pred cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 138 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....+..++..+.+++.+||+.||++|||+.++++
T Consensus 245 --~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 245 --LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp --CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11233445678999999999999999999999886
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-30 Score=236.32 Aligned_cols=170 Identities=17% Similarity=0.207 Sum_probs=133.6
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC---eEEecCCCccccCCC
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~---~kl~dfg~~~~~~~~ 75 (357)
++||+|.+++... .+..+++..+..|+.||+.||.|||+.+ ++||||||+||+++.++. +||+|||+++.....
T Consensus 108 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~ 186 (351)
T 3c0i_A 108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 186 (351)
T ss_dssp CSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTT
T ss_pred CCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEecCC
Confidence 5789999888643 2456999999999999999999999999 999999999999976554 999999999876543
Q ss_pred C----CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 76 K----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 76 ~----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
. ...||+.|+|||++.+..++.++|||||||++|+|++|..||........... ...... ........++..+
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i-~~~~~~--~~~~~~~~~s~~~ 263 (351)
T 3c0i_A 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGI-IKGKYK--MNPRQWSHISESA 263 (351)
T ss_dssp SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHH-HHTCCC--CCHHHHTTSCHHH
T ss_pred CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHH-HcCCCC--CCccccccCCHHH
Confidence 2 34689999999999988899999999999999999999999876433221111 000000 0000012345789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.++|.+||+.||++|||+.+++.
T Consensus 264 ~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 264 KDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHCCCChhHCcCHHHHhc
Confidence 99999999999999999999886
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-30 Score=243.29 Aligned_cols=171 Identities=16% Similarity=0.168 Sum_probs=136.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
|+||+|.++|.. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++......
T Consensus 156 ~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~ 233 (437)
T 4aw2_A 156 YVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 233 (437)
T ss_dssp CTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred CCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCccc
Confidence 579999999963 3578999999999999999999999999 9999999999999999999999999997654432
Q ss_pred -CccCCCCCCchhhhc-----CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 77 -SYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...||+.|+|||++. ...++.++|||||||++|||++|..||.....................+ .....+++.
T Consensus 234 ~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~~~s~~ 312 (437)
T 4aw2_A 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP-TQVTDVSEN 312 (437)
T ss_dssp CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC-SSCCCSCHH
T ss_pred ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCC-cccccCCHH
Confidence 357999999999997 4568999999999999999999999987654433322222111000111 112235678
Q ss_pred HHHHHHHhhhcCCCC--CCChhhHHH
Q 018348 151 LVRLASRCLQYEPRE--RPNPKSLVT 174 (357)
Q Consensus 151 l~~li~~cl~~~p~~--Rps~~~i~~ 174 (357)
+.+||++||..+|++ ||++.+++.
T Consensus 313 ~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 313 AKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred HHHHHHHHhcccccccCCCCHHHHhC
Confidence 999999999888888 999999876
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-30 Score=242.51 Aligned_cols=169 Identities=18% Similarity=0.187 Sum_probs=136.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 151 ~~gg~L~~~l~---~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 226 (410)
T 3v8s_A 151 MPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226 (410)
T ss_dssp CTTEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEEC
T ss_pred CCCCcHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccc
Confidence 57999999995 357999999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccCCCCCCchhhhcCCC----CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~----~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
.+..||+.|+|||++.+.. ++.++|||||||++|||++|..||.................. ...+....++..+
T Consensus 227 ~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~~~~s~~~ 304 (410)
T 3v8s_A 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS--LTFPDDNDISKEA 304 (410)
T ss_dssp CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH--CCCCTTCCCCHHH
T ss_pred cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc--ccCCCcccccHHH
Confidence 2567999999999998654 788999999999999999999998765443332222211100 1111122456789
Q ss_pred HHHHHHhhhcCCCC--CCChhhHHHH
Q 018348 152 VRLASRCLQYEPRE--RPNPKSLVTA 175 (357)
Q Consensus 152 ~~li~~cl~~~p~~--Rps~~~i~~~ 175 (357)
.+||.+||+.+|.+ ||++.+|+..
T Consensus 305 ~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 305 KNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred HHHHHHHccChhhhCCCCCHHHHhcC
Confidence 99999999999988 9999999874
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.8e-31 Score=235.52 Aligned_cols=182 Identities=17% Similarity=0.241 Sum_probs=134.0
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--- 75 (357)
+++|+|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 192 (310)
T 2wqm_A 114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192 (310)
T ss_dssp CCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC------------
T ss_pred CCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc
Confidence 4688999999532 3567999999999999999999999999 999999999999999999999999998765433
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....|+..|+|||++.+..++.++||||||+++|+|++|..||.......... ...+.........+..++..+.++
T Consensus 193 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l 270 (310)
T 2wqm_A 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEELRQL 270 (310)
T ss_dssp ------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHH--HHHHHTTCSCCCCTTTSCHHHHHH
T ss_pred ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHH--HHHhhcccCCCCcccccCHHHHHH
Confidence 23468899999999998889999999999999999999998886532111000 000000011111123455789999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccCCCC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKETEV 185 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~~~~ 185 (357)
+.+||+.||.+|||+.+|++.|+.+......
T Consensus 271 i~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 271 VNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999766543
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=238.36 Aligned_cols=171 Identities=10% Similarity=0.104 Sum_probs=137.2
Q ss_pred CCCccHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-----------CCCeEEecC
Q 018348 1 MPNETLAKHLFHW---ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----------DGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-----------~~~~kl~df 66 (357)
++||||.++|... ..+.+++..++.|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+||
T Consensus 149 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DF 227 (365)
T 3e7e_A 149 YSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDL 227 (365)
T ss_dssp CCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CTTEEECCC
T ss_pred cCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccCCEEEeeC
Confidence 5799999999632 3567999999999999999999999999 999999999999988 899999999
Q ss_pred CCccccC---CC---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccccccccc
Q 018348 67 GLMKNSR---DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 140 (357)
Q Consensus 67 g~~~~~~---~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (357)
|+++... .. ....||..|+|||++.+..++.++|||||||++|||++|+.||......... ......
T Consensus 228 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-------~~~~~~ 300 (365)
T 3e7e_A 228 GQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-------PEGLFR 300 (365)
T ss_dssp TTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-------ECSCCT
T ss_pred chhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-------echhcc
Confidence 9996543 11 2456899999999999888999999999999999999999887543221111 011111
Q ss_pred CCCCchhHHHHHHHHHHhhhcCCCCC-CChhhHHHHhcccccC
Q 018348 141 GQFTDDDGTELVRLASRCLQYEPRER-PNPKSLVTALSPLQKE 182 (357)
Q Consensus 141 ~~~~~~~~~~l~~li~~cl~~~p~~R-ps~~~i~~~L~~~~~~ 182 (357)
.. .....+.+++..|++.+|.+| |++.++.+.|+.....
T Consensus 301 -~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 301 -RL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -TC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -cc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 11 235678899999999999999 6788888888777543
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=229.12 Aligned_cols=165 Identities=20% Similarity=0.299 Sum_probs=136.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CCc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~~ 78 (357)
+++|+|.+++.. .+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ...
T Consensus 96 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (284)
T 2vgo_A 96 APRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTM 172 (284)
T ss_dssp CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCC
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCcccccccc
Confidence 468899999963 457999999999999999999999999 999999999999999999999999988655432 345
Q ss_pred cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 79 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
.|+..|+|||++.+..++.++||||||+++|+|++|..||............... ...++...+..+.+++.+|
T Consensus 173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~ 246 (284)
T 2vgo_A 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------DLKFPPFLSDGSKDLISKL 246 (284)
T ss_dssp CSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHHHHHH
T ss_pred cCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc------ccCCCCcCCHHHHHHHHHH
Confidence 6899999999999888999999999999999999999888654332221111111 1123444567899999999
Q ss_pred hhcCCCCCCChhhHHH
Q 018348 159 LQYEPRERPNPKSLVT 174 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~ 174 (357)
|+.||.+|||+.++++
T Consensus 247 l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 247 LRYHPPQRLPLKGVME 262 (284)
T ss_dssp SCSSGGGSCCHHHHHT
T ss_pred hhcCHhhCCCHHHHhh
Confidence 9999999999999986
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-30 Score=233.02 Aligned_cols=177 Identities=19% Similarity=0.238 Sum_probs=134.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++|++|.+++.. .+++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 116 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 192 (309)
T 2h34_A 116 INGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL 192 (309)
T ss_dssp CCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC------------
T ss_pred cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCccccccccccc
Confidence 468899999963 467999999999999999999999999 999999999999999999999999998765433
Q ss_pred CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
....||..|+|||.+.+..++.++||||||+++|+|++|..||.................. ....+..++..+.+++
T Consensus 193 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li 269 (309)
T 2h34_A 193 GNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPR---PSTVRPGIPVAFDAVI 269 (309)
T ss_dssp ----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCC---GGGTSTTCCTHHHHHH
T ss_pred cccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCC---ccccCCCCCHHHHHHH
Confidence 2346889999999999888999999999999999999999998765443322221111111 1122344557899999
Q ss_pred HHhhhcCCCCCC-ChhhHHHHhcccccCC
Q 018348 156 SRCLQYEPRERP-NPKSLVTALSPLQKET 183 (357)
Q Consensus 156 ~~cl~~~p~~Rp-s~~~i~~~L~~~~~~~ 183 (357)
.+||+.||++|| ++.+++..|+......
T Consensus 270 ~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 270 ARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp HHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred HHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 999999999999 9999999998776543
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-30 Score=228.74 Aligned_cols=166 Identities=17% Similarity=0.246 Sum_probs=115.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.. ..+++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 93 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 170 (278)
T 3cok_A 93 CHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY 170 (278)
T ss_dssp CTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred CCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcce
Confidence 468999999963 3468999999999999999999999999 999999999999999999999999998765432 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||.+.+..++.++||||||+++|+|++|..|+........... .... ....+..++..+.+++.
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~li~ 244 (278)
T 3cok_A 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK----VVLA--DYEMPSFLSIEAKDLIH 244 (278)
T ss_dssp ---------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSS--CCCCCTTSCHHHHHHHH
T ss_pred eccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH----Hhhc--ccCCccccCHHHHHHHH
Confidence 34689999999999888889999999999999999999988765432211111 1100 11233445678999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||++|||+.+++.
T Consensus 245 ~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 245 QLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHSCSSGGGSCCHHHHTT
T ss_pred HHcccCHhhCCCHHHHhc
Confidence 999999999999999876
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-31 Score=237.55 Aligned_cols=171 Identities=19% Similarity=0.274 Sum_probs=115.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC---CeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~---~~kl~dfg~~~~~~~~-- 75 (357)
++||+|.+++.. .+.+++..+..|+.|++.||.|||+.+ ++||||||+||+++.++ .+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 88 LNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp CCSCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 478999999973 568999999999999999999999999 99999999999997665 7999999999765443
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhh---cccccccccc--ccCCCCchhH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---RNLQMLTDSC--LEGQFTDDDG 148 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~ 148 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||.......... .....+.... ........++
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s 244 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS 244 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSC
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCC
Confidence 24467999999999998889999999999999999999998886532210000 0000011000 0111112345
Q ss_pred HHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 149 TELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 149 ~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+.+++.+||+.||.+|||+.+++.
T Consensus 245 ~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 245 QEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 78999999999999999999999874
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-30 Score=243.62 Aligned_cols=118 Identities=18% Similarity=0.271 Sum_probs=105.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC--eEEecCCCccccCCC-CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--PRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~--~kl~dfg~~~~~~~~-~~~~ 79 (357)
+|+|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++..... ....
T Consensus 182 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~ 260 (429)
T 3kvw_A 182 SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYI 260 (429)
T ss_dssp CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSC
T ss_pred CCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCCcccccC
Confidence 478999997655667999999999999999999999999 999999999999998887 999999998765543 3557
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcc
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 121 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~ 121 (357)
||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus 261 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp SCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 899999999999888999999999999999999999888654
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-30 Score=250.40 Aligned_cols=171 Identities=20% Similarity=0.337 Sum_probs=137.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~ 77 (357)
++||+|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++...... .
T Consensus 266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~ 344 (576)
T 2acx_A 266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344 (576)
T ss_dssp CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEEC
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCccccc
Confidence 57999999997554556999999999999999999999999 9999999999999999999999999998765442 4
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
..||+.|+|||++.+..++.++|||||||++|||++|..||...............+. .....++..+++.+.+||.+
T Consensus 345 ~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~--~~~~~~p~~~s~~~~dLI~~ 422 (576)
T 2acx_A 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EVPEEYSERFSPQARSLCSQ 422 (576)
T ss_dssp CCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH--HCCCCCCTTSCHHHHHHHHH
T ss_pred cCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh--cccccCCccCCHHHHHHHHH
Confidence 5789999999999988899999999999999999999998865321100000000000 01223445566899999999
Q ss_pred hhhcCCCCCC-----ChhhHHH
Q 018348 158 CLQYEPRERP-----NPKSLVT 174 (357)
Q Consensus 158 cl~~~p~~Rp-----s~~~i~~ 174 (357)
||+.||.+|| ++.+|+.
T Consensus 423 lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 423 LLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HTCSSGGGSTTCSSSHHHHHHT
T ss_pred hccCCHHHcCCCCCCCHHHHHh
Confidence 9999999999 5667664
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.8e-30 Score=231.62 Aligned_cols=165 Identities=18% Similarity=0.219 Sum_probs=135.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++++|.+++. ..+.+++..+..|+.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 123 ~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 199 (335)
T 2owb_A 123 CRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 199 (335)
T ss_dssp CTTCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCccccc
Confidence 46899999986 3468999999999999999999999999 999999999999999999999999998765422 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..||............... ....+..++..+.+++.
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~ 273 (335)
T 2owb_A 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAASLIQ 273 (335)
T ss_dssp CCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT------CCCCCTTSCHHHHHHHH
T ss_pred ccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC------CCCCCccCCHHHHHHHH
Confidence 346899999999999888999999999999999999999888654332211111110 11223345578999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||++|||+.+++.
T Consensus 274 ~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 274 KMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHTCSSGGGSCCGGGGGG
T ss_pred HHccCChhHCcCHHHHhc
Confidence 999999999999999986
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=226.40 Aligned_cols=166 Identities=18% Similarity=0.217 Sum_probs=136.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++++|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (294)
T 2rku_A 97 CRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 173 (294)
T ss_dssp CTTCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCccccc
Confidence 46899999885 3468999999999999999999999999 999999999999999999999999998765422 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..|+............... ....+..++..+.+++.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~ 247 (294)
T 2rku_A 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAASLIQ 247 (294)
T ss_dssp CCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHHHH
T ss_pred cccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc------cCCCccccCHHHHHHHH
Confidence 346899999999999888899999999999999999999888664332211111111 11233445578999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+||+.||++|||+.+++..
T Consensus 248 ~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 248 KMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHTCSSGGGSCCGGGGGGS
T ss_pred HHcccChhhCcCHHHHhhC
Confidence 9999999999999999873
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-31 Score=237.39 Aligned_cols=179 Identities=20% Similarity=0.322 Sum_probs=140.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|||.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 126 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~ 203 (326)
T 2w1i_A 126 LPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 203 (326)
T ss_dssp CTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEE
T ss_pred CCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhccccccccc
Confidence 468999999964 3457999999999999999999999999 9999999999999999999999999988765432
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh---hcc--------ccccccccccCC
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---DRN--------LQMLTDSCLEGQ 142 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~---~~~--------~~~~~~~~~~~~ 142 (357)
...++..|+|||.+.+..++.++||||||+++|+|++|..|+......... ... ............
T Consensus 204 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (326)
T 2w1i_A 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 283 (326)
T ss_dssp CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC
T ss_pred cccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCC
Confidence 234567799999999888899999999999999999998776433211110 000 000111111223
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
.+..++..+.++|.+||+.||++|||+.+|++.|+.+..
T Consensus 284 ~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 284 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 345567899999999999999999999999999987754
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-30 Score=233.62 Aligned_cols=169 Identities=18% Similarity=0.223 Sum_probs=135.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC----CeEEecCCCccccCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~----~~kl~dfg~~~~~~~~- 75 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++ .+||+|||++......
T Consensus 97 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~ 173 (321)
T 2a2a_A 97 VSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173 (321)
T ss_dssp CCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceecCccc
Confidence 46899999996 4568999999999999999999999999 99999999999999887 7999999998776543
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||.................. .....+...+..+.+
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~ 251 (321)
T 2a2a_A 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD--FDEEFFSHTSELAKD 251 (321)
T ss_dssp CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTCCHHHHH
T ss_pred cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc--cChhhhcccCHHHHH
Confidence 2446899999999999888999999999999999999999988664333222111111000 000111234578999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++.+||+.||++|||+.+++.
T Consensus 252 li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 252 FIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHhc
Confidence 999999999999999999986
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-30 Score=239.05 Aligned_cols=170 Identities=18% Similarity=0.143 Sum_probs=135.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee--CCCCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DEDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill--~~~~~~kl~dfg~~~~~~~~~-- 76 (357)
++||+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 168 ~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~ 245 (373)
T 2x4f_A 168 VDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245 (373)
T ss_dssp CTTCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence 578999999964 3457999999999999999999999999 9999999999999 567889999999998765432
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.................. ........+++.+.++|
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li 323 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--LEDEEFQDISEEAKEFI 323 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--SCSGGGTTSCHHHHHHH
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CChhhhccCCHHHHHHH
Confidence 346899999999999888999999999999999999999988764332221111111000 01111123457899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.||.+|||+.+++.
T Consensus 324 ~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 324 SKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHcCCChhhCCCHHHHhc
Confidence 9999999999999999986
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-30 Score=232.79 Aligned_cols=158 Identities=22% Similarity=0.237 Sum_probs=131.9
Q ss_pred Cc-cHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---Cc
Q 018348 3 NE-TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SY 78 (357)
Q Consensus 3 ~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~~ 78 (357)
+| +|.+++. ..+.+++..+..|+.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++...... ..
T Consensus 113 ~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~ 189 (335)
T 3dls_A 113 SGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF 189 (335)
T ss_dssp TSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEE
T ss_pred CCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCCCcEEEeecccceECCCCCceecc
Confidence 44 9999996 4567999999999999999999999999 9999999999999999999999999998765443 34
Q ss_pred cCCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 79 STNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
.||..|+|||++.+..+ +.++||||||+++|+|++|..||...... ... ....+..++..+.+++.+
T Consensus 190 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~------~~~~~~~~~~~l~~li~~ 257 (335)
T 3dls_A 190 CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VEA------AIHPPYLVSKELMSLVSG 257 (335)
T ss_dssp CSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TTT------CCCCSSCCCHHHHHHHHH
T ss_pred CCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hhh------ccCCCcccCHHHHHHHHH
Confidence 68999999999987766 78999999999999999999888642111 011 011223345789999999
Q ss_pred hhhcCCCCCCChhhHHHH
Q 018348 158 CLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 158 cl~~~p~~Rps~~~i~~~ 175 (357)
||+.||.+|||+.++++.
T Consensus 258 ~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 258 LLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp HTCSSGGGSCCHHHHHHC
T ss_pred HccCChhhCcCHHHHhcC
Confidence 999999999999999874
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-30 Score=231.89 Aligned_cols=171 Identities=15% Similarity=0.198 Sum_probs=135.2
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-------------------CCCeEE
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-------------------DGNPRL 63 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-------------------~~~~kl 63 (357)
+|+|.+++......++++..+..++.|++.||.|||+.+ ++||||||+||+++. ++.+||
T Consensus 100 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl 178 (339)
T 1z57_A 100 GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV 178 (339)
T ss_dssp CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEE
T ss_pred CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCccccccccccCCCceE
Confidence 789999997655568999999999999999999999999 999999999999987 678999
Q ss_pred ecCCCccccCCC-CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc---ccc----
Q 018348 64 STFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ---MLT---- 135 (357)
Q Consensus 64 ~dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~---~~~---- 135 (357)
+|||+++..... ....||..|+|||++.+..++.++||||||+++|+|++|..||.............. ...
T Consensus 179 ~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~ 258 (339)
T 1z57_A 179 VDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258 (339)
T ss_dssp CCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHH
T ss_pred eeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 999998865543 345789999999999988899999999999999999999988865432211100000 000
Q ss_pred -------------------------------cccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 -------------------------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 -------------------------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
........+...++.+.+++.+||+.||.+|||+.++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 000001123445788999999999999999999999875
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-30 Score=227.74 Aligned_cols=169 Identities=17% Similarity=0.243 Sum_probs=135.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC---eEEecCCCccccCCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~---~kl~dfg~~~~~~~~~- 76 (357)
++||+|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++. +||+|||++.......
T Consensus 87 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (284)
T 3kk8_A 87 VTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163 (284)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence 47899999986 3467999999999999999999999999 999999999999976554 9999999987665443
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..||.................. ........+++.+.++
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l 241 (284)
T 3kk8_A 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKSL 241 (284)
T ss_dssp CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHHH
T ss_pred ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--CCchhhcccCHHHHHH
Confidence 356899999999999888999999999999999999999998765433322221111111 1111123455789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+||+.||++|||+.+++.
T Consensus 242 i~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 242 IDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHcccChhhCCCHHHHhc
Confidence 99999999999999999976
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-31 Score=244.22 Aligned_cols=160 Identities=16% Similarity=0.122 Sum_probs=126.5
Q ss_pred CccHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-C
Q 018348 3 NETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-K 76 (357)
Q Consensus 3 ~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~ 76 (357)
+|||.+++.... ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 183 ~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~ 261 (377)
T 3byv_A 183 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVV 261 (377)
T ss_dssp SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCGGGCEETTCEEE
T ss_pred CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEechhheecCCccc
Confidence 689999996421 123446888999999999999999999 999999999999999999999999999865443 2
Q ss_pred CccCCCCCCchhhhcCC-----------CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCc
Q 018348 77 SYSTNLAFTPPEYLRTG-----------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-----------~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
...| ..|+|||++.+. .++.++|||||||++|||++|..||........ ...+.. ...
T Consensus 262 ~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~----~~~~~~------~~~ 330 (377)
T 3byv_A 262 SSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG----SEWIFR------SCK 330 (377)
T ss_dssp CCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC----SGGGGS------SCC
T ss_pred CCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc----hhhhhh------hcc
Confidence 4456 999999999877 789999999999999999999988865332111 111111 113
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+.++|.+||+.||++|||+.++++
T Consensus 331 ~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 331 NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 44578999999999999999999999986
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=233.56 Aligned_cols=178 Identities=19% Similarity=0.286 Sum_probs=138.0
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-- 76 (357)
+++|+|.+++... .+..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 112 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~ 190 (317)
T 2buj_A 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190 (317)
T ss_dssp CTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES
T ss_pred CCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhccccccc
Confidence 4688999999642 3578999999999999999999999999 9999999999999999999999999877643211
Q ss_pred -----------CccCCCCCCchhhhcCCC---CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCC
Q 018348 77 -----------SYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 77 -----------~~~gt~~y~aPE~~~~~~---~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
...||..|+|||++.+.. ++.++||||||+++|+|++|..||...... ...............
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~ 267 (317)
T 2buj_A 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQNQLSIP 267 (317)
T ss_dssp HHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHHCC--CC
T ss_pred ccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhhccCCCC
Confidence 124689999999987543 688999999999999999999887432110 000000000011112
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.+..++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 268 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 268 QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 2334567899999999999999999999999999988644
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-30 Score=247.28 Aligned_cols=167 Identities=18% Similarity=0.307 Sum_probs=134.0
Q ss_pred CCCccHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~-- 76 (357)
++||+|.++|.... ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.+|.+||+|||+++......
T Consensus 267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 57999999996533 457999999999999999999999999 9999999999999999999999999998765432
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||+.|+|||++.+..++.++|||||||++|||++|..||...............+... ...++..++..+.++
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~l 423 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPASKDF 423 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHHHHHH
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHHHHHH
Confidence 3479999999999998889999999999999999999999886542100000001111111 123445566899999
Q ss_pred HHHhhhcCCCCCCChh
Q 018348 155 ASRCLQYEPRERPNPK 170 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~ 170 (357)
|.+||+.||.+||++.
T Consensus 424 i~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 424 CEALLQKDPEKRLGFR 439 (543)
T ss_dssp HHHHSCSSGGGSCCCB
T ss_pred HHHhccCCHhHCCCCc
Confidence 9999999999999864
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.6e-31 Score=244.54 Aligned_cols=160 Identities=16% Similarity=0.122 Sum_probs=127.5
Q ss_pred CCccHHhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-
Q 018348 2 PNETLAKHLF-----HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 75 (357)
Q Consensus 2 ~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~- 75 (357)
.+|+|.+++. ....+++++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 187 ~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~ 265 (413)
T 3dzo_A 187 MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASA 265 (413)
T ss_dssp CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCGGGCEETTEEE
T ss_pred hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcccceEEEecCCeEEEEeccceeecCCcc
Confidence 4678888883 223557889999999999999999999999 999999999999999999999999998765543
Q ss_pred CCccCCCCCCchhhh----------cCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCc
Q 018348 76 KSYSTNLAFTPPEYL----------RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~----------~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
....| ..|+|||++ ....++.++|||||||++|+|++|+.||......... ..+. . ...
T Consensus 266 ~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~----~~~~----~--~~~ 334 (413)
T 3dzo_A 266 VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGS----EWIF----R--SCK 334 (413)
T ss_dssp CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCS----GGGG----S--SCC
T ss_pred ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhH----HHHH----h--hcc
Confidence 34467 999999999 4445788999999999999999999988654322211 1111 1 011
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHH
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLV 173 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~ 173 (357)
.+++.+.++|.+||+.||++||++.+++
T Consensus 335 ~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 335 NIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 3447899999999999999999976654
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=229.32 Aligned_cols=171 Identities=18% Similarity=0.228 Sum_probs=135.7
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 102 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (326)
T 1blx_A 102 DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180 (326)
T ss_dssp SCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCC
T ss_pred CCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccccc
Confidence 479999997655567999999999999999999999999 999999999999999999999999998765433 2456
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc--------c----------c---ccc
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------L----------T---DSC 138 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~--------~----------~---~~~ 138 (357)
||..|+|||++.+..++.++||||||+++|+|++|..||............... . . ...
T Consensus 181 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T 1blx_A 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ 260 (326)
T ss_dssp CCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCC
T ss_pred cccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcc
Confidence 899999999999888999999999999999999999888654322111100000 0 0 000
Q ss_pred ccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 139 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 139 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
........++..+.+++.+||+.||.+|||+.+++.
T Consensus 261 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 011223445678999999999999999999999985
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-30 Score=240.87 Aligned_cols=170 Identities=18% Similarity=0.190 Sum_probs=133.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.++|.. .+..+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++......
T Consensus 143 ~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~ 220 (412)
T 2vd5_A 143 YVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220 (412)
T ss_dssp CCSCBHHHHHHH-HSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccCCCcccc
Confidence 579999999963 2458999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -CccCCCCCCchhhhc-------CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhH
Q 018348 77 -SYSTNLAFTPPEYLR-------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 148 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~-------~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (357)
..+||+.|+|||++. ...++.++|||||||++|||++|..||.................... ....+..++
T Consensus 221 ~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~-~p~~~~~~s 299 (412)
T 2vd5_A 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS-LPLVDEGVP 299 (412)
T ss_dssp SSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC-CC----CCC
T ss_pred ceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcC-CCccccCCC
Confidence 357899999999997 34689999999999999999999999876544332222211100000 011123456
Q ss_pred HHHHHHHHHhhhcCCCCC---CChhhHHH
Q 018348 149 TELVRLASRCLQYEPRER---PNPKSLVT 174 (357)
Q Consensus 149 ~~l~~li~~cl~~~p~~R---ps~~~i~~ 174 (357)
+.+.++|++||. +|.+| |++.+|+.
T Consensus 300 ~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 300 EEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 789999999999 99998 57888765
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-30 Score=230.56 Aligned_cols=169 Identities=19% Similarity=0.269 Sum_probs=129.8
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCcc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~~ 79 (357)
|+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 103 ~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 180 (311)
T 3niz_A 103 KDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180 (311)
T ss_dssp EEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCC
T ss_pred CCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCc
Confidence 578888853 4567999999999999999999999999 999999999999999999999999998865432 2346
Q ss_pred CCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccc------------------------
Q 018348 80 TNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML------------------------ 134 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~------------------------ 134 (357)
||..|+|||++.+ ..++.++||||||+++|+|++|..||................
T Consensus 181 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (311)
T 3niz_A 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQV 260 (311)
T ss_dssp CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCC
T ss_pred ccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhccccc
Confidence 8999999999976 457999999999999999999998886532211110000000
Q ss_pred ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 135 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 135 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..........+.+++++.+++.+||+.||++|||+.++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 261 FEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000011234568899999999999999999999986
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-30 Score=235.10 Aligned_cols=169 Identities=21% Similarity=0.307 Sum_probs=132.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC----CCeEEecCCCccccCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED----GNPRLSTFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~----~~~kl~dfg~~~~~~~~- 75 (357)
++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||++..+ +.+||+|||+++.....
T Consensus 98 ~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 98 MKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 47899999996 4568999999999999999999999999 9999999999998432 35999999998865433
Q ss_pred ---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcch---hHHhhhccccccccccccCCCCchhHH
Q 018348 76 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNLQMLTDSCLEGQFTDDDGT 149 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
....||..|+|||++.+..++.++|||||||++|+|++|..||.... ...+....... ........+..++.
T Consensus 175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~ 252 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG--KFSLSGGYWNSVSD 252 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHC--CCCCCSTTTTTSCH
T ss_pred CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccC--CcccCccccccCCH
Confidence 24568999999999987778999999999999999999998886421 11111111000 01112223345668
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+.++|.+||+.||++|||+.+++.
T Consensus 253 ~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 253 TAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 8999999999999999999998875
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-30 Score=238.28 Aligned_cols=170 Identities=20% Similarity=0.280 Sum_probs=132.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.++|.. .+.+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 141 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 217 (355)
T 1vzo_A 141 INGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA 217 (355)
T ss_dssp CCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGG
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcc
Confidence 578999999963 457999999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCCCCchhhhcCC--CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....||..|+|||++.+. .++.++||||||+++|+|++|..||...............+.. ....++..++..+.+
T Consensus 218 ~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 295 (355)
T 1vzo_A 218 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQEMSALAKD 295 (355)
T ss_dssp CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCTTSCHHHHH
T ss_pred cCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCCcccCHHHHH
Confidence 234689999999999863 4688999999999999999999888542111000000000000 112344556678999
Q ss_pred HHHHhhhcCCCCCC-----ChhhHHHH
Q 018348 154 LASRCLQYEPRERP-----NPKSLVTA 175 (357)
Q Consensus 154 li~~cl~~~p~~Rp-----s~~~i~~~ 175 (357)
+|.+||+.||.+|| ++.++++.
T Consensus 296 li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 296 LIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 99999999999999 78887764
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-30 Score=235.13 Aligned_cols=171 Identities=18% Similarity=0.271 Sum_probs=132.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeC------CCCCeEEecCCCccccCCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFD------EDGNPRLSTFGLMKNSRDG 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~------~~~~~kl~dfg~~~~~~~~ 75 (357)
+|+|.+++.......+++..+..|+.||+.||.|||++ + ++||||||+||+++ ..+.+||+|||+++.....
T Consensus 113 ~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~ 191 (373)
T 1q8y_A 113 GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191 (373)
T ss_dssp CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC
T ss_pred CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC
Confidence 78999999765667799999999999999999999998 8 99999999999994 3457999999998766543
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhh------hc-------------------
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR------DR------------------- 129 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~------~~------------------- 129 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||......... ..
T Consensus 192 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 271 (373)
T 1q8y_A 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYT 271 (373)
T ss_dssp CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTH
T ss_pred CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchh
Confidence 3457899999999999888999999999999999999999888643211000 00
Q ss_pred --------ccccccc-------c--cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 130 --------NLQMLTD-------S--CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 130 --------~~~~~~~-------~--~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....+.. . ......+..++..+.+||.+||+.||.+|||+.++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 272 RTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred hhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 0000000 0 0011345567789999999999999999999999987
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-30 Score=227.67 Aligned_cols=170 Identities=19% Similarity=0.297 Sum_probs=129.2
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
.|+|.+++.. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ...
T Consensus 83 ~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (288)
T 1ob3_A 83 DQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160 (288)
T ss_dssp SEEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred CCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccccccccc
Confidence 3588888853 4578999999999999999999999999 999999999999999999999999998765432 234
Q ss_pred cCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-----------cc-----ccccc--
Q 018348 79 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------ML-----TDSCL-- 139 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-----------~~-----~~~~~-- 139 (357)
.||..|+|||++.+. .++.++||||||+++|+|++|..||.............. .. .++..
T Consensus 161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T 1ob3_A 161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240 (288)
T ss_dssp -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred cccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccccc
Confidence 679999999999764 589999999999999999999988865432111100000 00 00000
Q ss_pred -----cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 140 -----EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 140 -----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.......+++.+.+++.+||+.||++|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 01112345678999999999999999999999875
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-30 Score=240.49 Aligned_cols=169 Identities=21% Similarity=0.298 Sum_probs=129.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC--------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-------- 74 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~-------- 74 (357)
+|+|.+++. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~~~L~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 169 (388)
T 3oz6_A 94 ETDLHAVIR---ANILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNI 169 (388)
T ss_dssp SEEHHHHHH---HTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCG
T ss_pred CcCHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccc
Confidence 368888885 358999999999999999999999999 99999999999999999999999999876432
Q ss_pred -----------------CCCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccccc
Q 018348 75 -----------------GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136 (357)
Q Consensus 75 -----------------~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (357)
.....||+.|+|||++.+ ..++.++|||||||++|||++|..||++.............+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~ 249 (388)
T 3oz6_A 170 PLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDF 249 (388)
T ss_dssp GGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred cccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 123468999999999986 56899999999999999999999988764322111111000000
Q ss_pred c-----------------------------ccc------------CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 137 S-----------------------------CLE------------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 137 ~-----------------------------~~~------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
+ ... ...+..+++.+.+|+.+||+.||++|||+.+++..
T Consensus 250 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 250 PSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKH 329 (388)
T ss_dssp CCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence 0 000 00111345789999999999999999999998864
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-30 Score=233.63 Aligned_cols=166 Identities=18% Similarity=0.282 Sum_probs=128.6
Q ss_pred CCCccHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----
Q 018348 1 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---- 75 (357)
++||+|.+++..... ...++..++.|+.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 143 ~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~ 221 (332)
T 3qd2_B 143 CRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221 (332)
T ss_dssp CCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC----
T ss_pred cCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhc
Confidence 478999999975432 34677789999999999999999999 999999999999999999999999998865543
Q ss_pred ------------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCC
Q 018348 76 ------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143 (357)
Q Consensus 76 ------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..++......... ...... ...
T Consensus 222 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~--~~~~~~-----~~~ 294 (332)
T 3qd2_B 222 TVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITD--VRNLKF-----PLL 294 (332)
T ss_dssp ----------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHH--HHTTCC-----CHH
T ss_pred cccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHH--hhccCC-----Ccc
Confidence 2345899999999999888999999999999999999986543221111000 000000 001
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....++.+.+++.+||+.||.+|||+.++++
T Consensus 295 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 295 FTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred cccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 1223467899999999999999999999986
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=239.12 Aligned_cols=169 Identities=16% Similarity=0.245 Sum_probs=124.9
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC------
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------ 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------ 75 (357)
.+|+|.+++. ....+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 139 ~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 215 (458)
T 3rp9_A 139 ADSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ 215 (458)
T ss_dssp CSEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCC
T ss_pred cccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccCccccccc
Confidence 3678999986 4568999999999999999999999999 999999999999999999999999999865321
Q ss_pred -------------------------CCccCCCCCCchhhhc-CCCCCCcccchhHHHHHHHHHc-----------CCCCC
Q 018348 76 -------------------------KSYSTNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLS-----------GKHIP 118 (357)
Q Consensus 76 -------------------------~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~vl~el~~-----------g~~~~ 118 (357)
...+||+.|+|||++. +..++.++|||||||++|||++ |+++|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f 295 (458)
T 3rp9_A 216 LPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLF 295 (458)
T ss_dssp CC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSC
T ss_pred cccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccC
Confidence 2345799999999864 4568999999999999999998 55555
Q ss_pred CcchhHHhhh--------------------cc-----------------------ccccc---cccccCCCCchhHHHHH
Q 018348 119 PSHALDLIRD--------------------RN-----------------------LQMLT---DSCLEGQFTDDDGTELV 152 (357)
Q Consensus 119 ~~~~~~~~~~--------------------~~-----------------------~~~~~---~~~~~~~~~~~~~~~l~ 152 (357)
++........ .. ..... ...+ ....+..++.+.
T Consensus 296 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~ 374 (458)
T 3rp9_A 296 PGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDL-AERFPASSADAI 374 (458)
T ss_dssp C--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCG-GGGSTTSCHHHH
T ss_pred CCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCH-HHHCCCCCHHHH
Confidence 4321100000 00 00000 0000 011123457899
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+|+.+||+.||.+|||+.+++.
T Consensus 375 dLl~~mL~~dP~~R~t~~e~L~ 396 (458)
T 3rp9_A 375 HLLKRMLVFNPNKRITINECLA 396 (458)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhccCccccCCHHHHhc
Confidence 9999999999999999999987
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-30 Score=228.53 Aligned_cols=166 Identities=18% Similarity=0.287 Sum_probs=135.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. .+++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 102 ~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 177 (303)
T 3a7i_A 102 LGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177 (303)
T ss_dssp CTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBC
T ss_pred CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccC
Confidence 46899999994 468999999999999999999999999 999999999999999999999999998765433 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..|+.............. ......+..++..+.+++.
T Consensus 178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~ 252 (303)
T 3a7i_A 178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK-----NNPPTLEGNYSKPLKEFVE 252 (303)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-----SCCCCCCSSCCHHHHHHHH
T ss_pred ccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc-----CCCCCCccccCHHHHHHHH
Confidence 44688999999999988899999999999999999999988765332221111000 0112233445578999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+||+.||.+|||+.+++..
T Consensus 253 ~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 253 ACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HHCCSSGGGSCCHHHHTTC
T ss_pred HHcCCChhhCcCHHHHhhC
Confidence 9999999999999998763
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=224.61 Aligned_cols=167 Identities=18% Similarity=0.251 Sum_probs=132.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCCCCeeeC-CCCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~~~H~dlk~~Nill~-~~~~~kl~dfg~~~~~~~~~-- 76 (357)
+++|+|.+++. ..+.+++..+..|+.|++.||.|||+.+ +++||||||+||+++ .++.+||+|||++.......
T Consensus 111 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (290)
T 1t4h_A 111 MTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred cCCCCHHHHHH--HccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccc
Confidence 47899999996 3468999999999999999999999986 599999999999997 78999999999987654432
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhH-HhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...||..|+|||++. +.++.++||||||+++|+|++|..||...... ............ ...+...++.+.+++
T Consensus 189 ~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li 263 (290)
T 1t4h_A 189 AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP----ASFDKVAIPEVKEII 263 (290)
T ss_dssp ESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC----GGGGGCCCHHHHHHH
T ss_pred cccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc----cccCCCCCHHHHHHH
Confidence 356899999999887 56899999999999999999999888653221 111111111111 112223346899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.||.+|||+.+++.
T Consensus 264 ~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 264 EGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHSCSSGGGSCCHHHHHT
T ss_pred HHHccCChhhCCCHHHHhh
Confidence 9999999999999999986
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-30 Score=233.59 Aligned_cols=173 Identities=18% Similarity=0.213 Sum_probs=123.0
Q ss_pred CccHHhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 3 NETLAKHLFHW-ETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 3 ~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+|+|.+++... ..+++++..++.|+.||+.||.|||+.+ +++||||||+||+++.++.+||+|||+++......
T Consensus 117 ~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 196 (337)
T 3ll6_A 117 KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW 196 (337)
T ss_dssp SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----
T ss_pred CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccc
Confidence 58899988542 3567999999999999999999999985 59999999999999999999999999987654321
Q ss_pred ------------CccCCCCCCchhhh---cCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccC
Q 018348 77 ------------SYSTNLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 141 (357)
Q Consensus 77 ------------~~~gt~~y~aPE~~---~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
...||..|+|||++ .+..++.++||||||+++|+|++|..||........... ....
T Consensus 197 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~--------~~~~ 268 (337)
T 3ll6_A 197 SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG--------KYSI 268 (337)
T ss_dssp ---------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------------CCC
T ss_pred cccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC--------cccC
Confidence 23478999999998 445678899999999999999999988865332211111 1111
Q ss_pred CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 142 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
..+...+..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 269 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 269 PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 122233456889999999999999999999999998886543
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-30 Score=227.21 Aligned_cols=169 Identities=17% Similarity=0.237 Sum_probs=128.2
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCcc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~~ 79 (357)
|+|.+++.. ..+.+++..+..|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 85 ~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 162 (292)
T 3o0g_A 85 QDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV 162 (292)
T ss_dssp EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCC
T ss_pred CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCc
Confidence 466666643 4578999999999999999999999999 999999999999999999999999999765432 2446
Q ss_pred CCCCCCchhhhcCCC-CCCcccchhHHHHHHHHHcCCCCCCcc-hhHHhhhcccc--------------ccc--------
Q 018348 80 TNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQ--------------MLT-------- 135 (357)
Q Consensus 80 gt~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~~~~~~-~~~~~~~~~~~--------------~~~-------- 135 (357)
||..|+|||++.+.. ++.++||||||+++|+|++|..|+... ........... ...
T Consensus 163 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (292)
T 3o0g_A 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY 242 (292)
T ss_dssp SCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC
T ss_pred cccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccc
Confidence 799999999998765 799999999999999999988775332 11110000000 000
Q ss_pred -cccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 -DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 -~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.........+..+..+.+++.+||+.||++|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000001122345678999999999999999999999986
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8e-30 Score=230.82 Aligned_cols=169 Identities=11% Similarity=0.131 Sum_probs=129.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.......+++..+..|+.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 187 (326)
T 2x7f_A 109 CGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 187 (326)
T ss_dssp CTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC----------
T ss_pred CCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccc
Confidence 46889999997655578999999999999999999999999 999999999999999999999999998765432 2
Q ss_pred CccCCCCCCchhhhc-----CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...||..|+|||++. +..++.++||||||+++|+|++|..|+............... ......+..++..+
T Consensus 188 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l 263 (326)
T 2x7f_A 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN----PAPRLKSKKWSKKF 263 (326)
T ss_dssp ---CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCSCSCSCHHH
T ss_pred cccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC----ccccCCccccCHHH
Confidence 446899999999987 456889999999999999999999887653322111111000 11111233455789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+||+.||.+||++.+++.
T Consensus 264 ~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 264 QSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhccChhhCCCHHHHhh
Confidence 99999999999999999999886
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-30 Score=228.36 Aligned_cols=169 Identities=18% Similarity=0.236 Sum_probs=135.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee---CCCCCeEEecCCCccccCCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill---~~~~~~kl~dfg~~~~~~~~~- 76 (357)
++||+|.+++.. .+.+++..+..++.|++.||.|||+.+ ++||||||+||++ +.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 88 VSGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp CCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred CCCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 468999999963 467999999999999999999999999 9999999999999 778899999999987654332
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...||..|+|||++.+..++.++||||||+++|+|++|..||................. ......+..++..+.+++
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li 242 (304)
T 2jam_A 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY--EFESPFWDDISESAKDFI 242 (304)
T ss_dssp HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC--CCCTTTTTTSCHHHHHHH
T ss_pred ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCccccccCCHHHHHHH
Confidence 23589999999999988899999999999999999999988866433322211111111 111222344568899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.||++|||+.+++.
T Consensus 243 ~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 243 CHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHHCSSTTTSCCHHHHHT
T ss_pred HHHcCCChhHCcCHHHHhc
Confidence 9999999999999999886
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=230.84 Aligned_cols=171 Identities=16% Similarity=0.183 Sum_probs=133.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee-------------------CCCCCeEE
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF-------------------DEDGNPRL 63 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill-------------------~~~~~~kl 63 (357)
+|+|.+++......++++..+..|+.||+.||.|||+.+ ++||||||+||++ +.++.+||
T Consensus 105 ~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl 183 (355)
T 2eu9_A 105 GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 183 (355)
T ss_dssp CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEE
T ss_pred CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccccCCCcEEE
Confidence 577778886655568999999999999999999999999 9999999999999 56789999
Q ss_pred ecCCCccccCCC-CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc---ccc----
Q 018348 64 STFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ---MLT---- 135 (357)
Q Consensus 64 ~dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~---~~~---- 135 (357)
+|||+++..... ....||..|+|||++.+..++.++||||||+++|+|++|..||.............. ...
T Consensus 184 ~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~ 263 (355)
T 2eu9_A 184 ADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 263 (355)
T ss_dssp CCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred eecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHh
Confidence 999998865443 355789999999999988899999999999999999999998865332111000000 000
Q ss_pred -------------------------------cccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 -------------------------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 -------------------------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
............+..+.+|+.+||+.||++|||+.+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 264 HRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000001112334668999999999999999999999874
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=233.43 Aligned_cols=118 Identities=15% Similarity=0.201 Sum_probs=104.3
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCceecCCCCCCeeeC--CCCCeEEecCCCccccCCC-CC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS--KGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDG-KS 77 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--~~~~~H~dlk~~Nill~--~~~~~kl~dfg~~~~~~~~-~~ 77 (357)
+|+|.+++.....+.+++..+..++.|++.||.|||+ .+ |+||||||+|||++ .++.+||+|||+++..... ..
T Consensus 139 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~ 217 (382)
T 2vx3_A 139 SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ 217 (382)
T ss_dssp CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCS
T ss_pred CCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCceeccccccc
Confidence 4699999976555779999999999999999999995 56 99999999999994 5788999999999876543 35
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcc
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 121 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~ 121 (357)
..||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus 218 ~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 218 YIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp SCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 67899999999999888999999999999999999999988753
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=223.72 Aligned_cols=168 Identities=18% Similarity=0.210 Sum_probs=132.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee---CCCCCeEEecCCCccccCCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill---~~~~~~kl~dfg~~~~~~~~~- 76 (357)
++||+|.+++.. .+.+++..+..|+.|++.||.|||+.+ ++||||||+||++ +.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 88 CTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp CCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 468999999963 567999999999999999999999999 9999999999999 788999999999987655432
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||..|+|||++.+ .++.++||||||+++|+|++|..||................... .......+++.+.++
T Consensus 165 ~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 241 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTF--PEKDWLNVSPQAESL 241 (277)
T ss_dssp BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CHHHHTTSCHHHHHH
T ss_pred hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC--CchhhhcCCHHHHHH
Confidence 4568999999999875 58999999999999999999999886643332221111110000 000001245789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+||+.||.+|||+.++++
T Consensus 242 i~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 242 IRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHccCChhhCcCHHHHhc
Confidence 99999999999999999875
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-30 Score=232.71 Aligned_cols=176 Identities=19% Similarity=0.275 Sum_probs=139.2
Q ss_pred CCCccHHhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC---CCCeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWET-----HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~---~~~~kl~dfg~~~~~ 72 (357)
++||||.+++..... ..+++..++.++.|++.||.|||+.+ ++||||||+||+++. ++.+||+|||++...
T Consensus 115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~ 193 (327)
T 2yfx_A 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193 (327)
T ss_dssp CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence 468999999975422 45999999999999999999999999 999999999999984 446999999987643
Q ss_pred CC------CCCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCc
Q 018348 73 RD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145 (357)
Q Consensus 73 ~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
.. .....+|..|+|||++.+..++.++||||||+++|+|++ |..|+............... .....+.
T Consensus 194 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~ 268 (327)
T 2yfx_A 194 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-----GRMDPPK 268 (327)
T ss_dssp HC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-----CCCCCCT
T ss_pred ccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcC-----CCCCCCC
Confidence 22 223457889999999988889999999999999999998 87777654332221111111 1112334
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 269 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 269 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 5567899999999999999999999999999887654
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=224.76 Aligned_cols=169 Identities=18% Similarity=0.247 Sum_probs=129.8
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee---CCCCCeEEecCCCccccCCC
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill---~~~~~~kl~dfg~~~~~~~~ 75 (357)
++||+|.+++... .+..+++..+..|+.|++.||.|||+.+ ++||||||+||++ +.++.+||+|||++......
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence 4689999998542 2478999999999999999999999999 9999999999999 45678999999998765433
Q ss_pred ---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 76 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 76 ---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
....||..|+|||++. +.++.++||||||+++|+|++|..||................... . ......++.+.
T Consensus 181 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~ 256 (285)
T 3is5_A 181 EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY--A-VECRPLTPQAV 256 (285)
T ss_dssp ------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--C-C--CCCCHHHH
T ss_pred ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCccc--c-cccCcCCHHHH
Confidence 3456899999999986 567899999999999999999999987654333222211111110 0 01112347889
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+++.+||+.||++|||+.+++.
T Consensus 257 ~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 257 DLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHccCChhhCcCHHHHhc
Confidence 9999999999999999999985
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=233.13 Aligned_cols=169 Identities=21% Similarity=0.255 Sum_probs=133.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
++||+|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||||.||+++.+|.++|+|||++...... ..
T Consensus 182 ~~g~~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~ 258 (365)
T 2y7j_A 182 MRKGELFDYLT--EKVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE 258 (365)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCC
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccccCCCccccc
Confidence 57899999996 3467999999999999999999999999 999999999999999999999999998766543 24
Q ss_pred ccCCCCCCchhhhcC------CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 78 YSTNLAFTPPEYLRT------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~------~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
..||+.|+|||++.+ ..++.++||||||+++|+|++|..||..................... .....++..+
T Consensus 259 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~ 336 (365)
T 2y7j_A 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS--PEWDDRSSTV 336 (365)
T ss_dssp CCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH--HHHSSSCHHH
T ss_pred CCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--cccccCCHHH
Confidence 568999999999864 25788999999999999999999988654322211111111000000 0011234679
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+||+.||++|||+.+++.
T Consensus 337 ~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 337 KDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHhc
Confidence 99999999999999999999986
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=233.23 Aligned_cols=167 Identities=17% Similarity=0.251 Sum_probs=132.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCccCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++. .+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....+|
T Consensus 113 ~~~L~~~~~---~~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t 188 (367)
T 1cm8_A 113 GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVT 188 (367)
T ss_dssp SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSC
T ss_pred CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCC
Confidence 678999985 357999999999999999999999999 999999999999999999999999999876543 345789
Q ss_pred CCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc--------------------------cc
Q 018348 82 LAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------------ML 134 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~--------------------------~~ 134 (357)
..|+|||++.+ ..++.++|||||||++++|++|+.||.............. ..
T Consensus 189 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (367)
T 1cm8_A 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL 268 (367)
T ss_dssp GGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC
T ss_pred CCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCC
Confidence 99999999987 5789999999999999999999998875432111000000 00
Q ss_pred ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 135 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 135 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..... .......++.+.+|+.+||+.||.+|||+.+++.
T Consensus 269 ~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 269 EKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 00000 1122345678999999999999999999999987
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-30 Score=226.98 Aligned_cols=174 Identities=20% Similarity=0.253 Sum_probs=136.0
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCC----ceecCCCCCCeeeCCCCCeEEecCCCccccCC
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGR----ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~----~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~ 74 (357)
++||||.+++... ....+++..++.|+.|++.||.|||+.+. ++||||||+||+++.++.+||+|||+++....
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp CTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 4688999999643 23569999999999999999999999763 99999999999999999999999999876654
Q ss_pred CC----CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 75 GK----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 75 ~~----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
.. ...||..|+|||.+.+..++.++||||||+++|+|++|..|+................ ....+..++..
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~ 243 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-----FRRIPYRYSDE 243 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----CCCCCTTSCHH
T ss_pred ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcc-----cccCCcccCHH
Confidence 32 2358999999999998889999999999999999999998886543322211111110 11233445678
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+.+++.+||+.||.+|||+.+|+..+...
T Consensus 244 l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 244 LNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred HHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 99999999999999999999999866444
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-30 Score=238.52 Aligned_cols=171 Identities=13% Similarity=0.197 Sum_probs=133.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCC----------------------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDG---------------------- 59 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~---------------------- 59 (357)
+|+|.+++.....+.+++..+..|+.||+.||.|||++ + |+||||||+|||++.++
T Consensus 128 ~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (397)
T 1wak_A 128 GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPS 206 (397)
T ss_dssp CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHHHC-----------
T ss_pred CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCC
Confidence 56777777655557899999999999999999999998 8 99999999999999775
Q ss_pred ---------------------------CeEEecCCCccccCCC-CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHH
Q 018348 60 ---------------------------NPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 111 (357)
Q Consensus 60 ---------------------------~~kl~dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el 111 (357)
.+||+|||+++..... ....||..|+|||++.+..++.++|||||||++|+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 286 (397)
T 1wak_A 207 GSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFEL 286 (397)
T ss_dssp ----------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHH
T ss_pred CCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHH
Confidence 7999999998765543 345789999999999988899999999999999999
Q ss_pred HcCCCCCCcchhHH-------hh------h---------cc-c----------cccccc---------cccCCCCchhHH
Q 018348 112 LSGKHIPPSHALDL-------IR------D---------RN-L----------QMLTDS---------CLEGQFTDDDGT 149 (357)
Q Consensus 112 ~~g~~~~~~~~~~~-------~~------~---------~~-~----------~~~~~~---------~~~~~~~~~~~~ 149 (357)
++|..||....... .. . .. . ..+... ......+...+.
T Consensus 287 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (397)
T 1wak_A 287 ATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAA 366 (397)
T ss_dssp HHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHH
T ss_pred hhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHH
Confidence 99998886422100 00 0 00 0 000000 000123455677
Q ss_pred HHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 150 ELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 150 ~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+.+|+.+||+.||.+|||+.++++
T Consensus 367 ~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 367 GFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHhccChhhcCCHHHHhh
Confidence 8999999999999999999999986
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=228.94 Aligned_cols=170 Identities=20% Similarity=0.290 Sum_probs=130.7
Q ss_pred ccHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----
Q 018348 4 ETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 75 (357)
Q Consensus 4 gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---- 75 (357)
|+|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (317)
T 2pmi_A 87 NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF 165 (317)
T ss_dssp CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCC
T ss_pred CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCcccC
Confidence 6888888532 1246999999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-----------c---cc--cc-
Q 018348 76 KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------M---LT--DS- 137 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-----------~---~~--~~- 137 (357)
....||..|+|||++.+. .++.++|||||||++|+|++|..||.............. . .. .+
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 245 (317)
T 2pmi_A 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPN 245 (317)
T ss_dssp CCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTT
T ss_pred CCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccc
Confidence 244689999999999764 579999999999999999999998875432211110000 0 00 00
Q ss_pred -----------cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 138 -----------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 138 -----------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
......+...+..+.+++.+||+.||++|||+.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 246 IQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0011112234578999999999999999999999875
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-30 Score=234.32 Aligned_cols=171 Identities=19% Similarity=0.262 Sum_probs=132.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccC--CCCC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--DGKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~--~~~~ 77 (357)
++||||.+++.. .+.+++..+..|+.+++.||.|||+. + ++||||||+||+++.++.+||+|||++.... ....
T Consensus 113 ~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 189 (360)
T 3eqc_A 113 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 189 (360)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence 478999999963 45799999999999999999999996 7 9999999999999999999999999986542 2234
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc--------------------------
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------------------------- 131 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~-------------------------- 131 (357)
..||..|+|||++.+..++.++||||||+++|+|++|..||.............
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 3eqc_A 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269 (360)
T ss_dssp -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence 578999999999998889999999999999999999998886533221110000
Q ss_pred ------------cccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 132 ------------QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 132 ------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..+.........+..++..+.+++.+||+.||++|||+.++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000011112234578999999999999999999999986
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-30 Score=251.04 Aligned_cols=174 Identities=21% Similarity=0.289 Sum_probs=139.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 472 ~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 549 (656)
T 2j0j_A 472 CTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 549 (656)
T ss_dssp CTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------
T ss_pred CCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcceec
Confidence 578999999964 3457999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...+|..|+|||++.+..++.++||||||+++|||++ |..||.............. ......+..+++.+.++
T Consensus 550 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~l 624 (656)
T 2j0j_A 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTLYSL 624 (656)
T ss_dssp ----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH-----TCCCCCCTTCCHHHHHH
T ss_pred cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccccHHHHHH
Confidence 2345678999999998889999999999999999997 8877765433222111111 11122345566899999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+.+||+.||.+|||+.+|++.|+.+..
T Consensus 625 i~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 625 MTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999987643
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=226.63 Aligned_cols=173 Identities=20% Similarity=0.338 Sum_probs=131.3
Q ss_pred CCCccHHhhhccC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCC
Q 018348 1 MPNETLAKHLFHW------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~ 74 (357)
++||+|.+++... ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 173 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHCC-
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchheecc
Confidence 4689999999531 3467999999999999999999999999 99999999999999999999999998765432
Q ss_pred C---------CCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhh----cccccccccccc
Q 018348 75 G---------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----RNLQMLTDSCLE 140 (357)
Q Consensus 75 ~---------~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~ 140 (357)
. ....||..|+|||++.+ ..++.++||||||+++|+|++|..||.......... ............
T Consensus 174 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (303)
T 2vwi_A 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 253 (303)
T ss_dssp --------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC----
T ss_pred CCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccccccc
Confidence 2 23468999999999876 467899999999999999999998886532211111 111111111111
Q ss_pred CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 141 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
......++..+.+++.+||+.||.+|||+.+++.
T Consensus 254 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 1223345678999999999999999999999986
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=223.18 Aligned_cols=168 Identities=17% Similarity=0.179 Sum_probs=131.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+++|+|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 87 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 46889999996 4567999999999999999999999999 999999999999999999999999998754321
Q ss_pred -CCccCCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....||..|+|||.+.+..+ +.++||||||+++|+|++|..||.............. ...........++..+.+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 240 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK---EKKTYLNPWKKIDSAPLA 240 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH---TTCTTSTTGGGSCHHHHH
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh---hcccccCchhhcCHHHHH
Confidence 24468899999999987664 7799999999999999999988865322110000000 000001112244578999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++.+||+.||.+|||+.+++.
T Consensus 241 li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 241 LLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHCCCCchhCCCHHHHhc
Confidence 999999999999999999876
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=229.47 Aligned_cols=171 Identities=15% Similarity=0.277 Sum_probs=129.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++++|.+++. ..+.+++..+..|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 106 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (331)
T 4aaa_A 106 VDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182 (331)
T ss_dssp CSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred CCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCccccC
Confidence 46788888875 4567999999999999999999999999 999999999999999999999999998765432 2
Q ss_pred CccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc--------------------ccccc
Q 018348 77 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------------LQMLT 135 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~--------------------~~~~~ 135 (357)
...||..|+|||++.+. .++.++||||||+++|+|++|..||............ .....
T Consensus 183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (331)
T 4aaa_A 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262 (331)
T ss_dssp -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCC
T ss_pred CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccccc
Confidence 34689999999999875 6899999999999999999999888654321111000 00000
Q ss_pred cccccC-----CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 DSCLEG-----QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 ~~~~~~-----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+.... ...+.++..+.+++.+||+.||++|||+.++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 011234678999999999999999999999886
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-30 Score=238.44 Aligned_cols=165 Identities=17% Similarity=0.233 Sum_probs=126.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC---CCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~---~~~kl~dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++..+..|+.|++.||.|||+.+ ++||||||+|||++.+ +.+||+|||+++.....
T Consensus 221 ~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~ 297 (419)
T 3i6u_A 221 MEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297 (419)
T ss_dssp CTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC----
T ss_pred CCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeecccceecCCCcc
Confidence 57899999996 4578999999999999999999999999 9999999999999654 45999999999876543
Q ss_pred -CCccCCCCCCchhhhcC---CCCCCcccchhHHHHHHHHHcCCCCCCcchhH-----HhhhccccccccccccCCCCch
Q 018348 76 -KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDD 146 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 146 (357)
....||+.|+|||++.+ ..++.++||||||+++|+|++|..||...... ......... .......
T Consensus 298 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~------~~~~~~~ 371 (419)
T 3i6u_A 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF------IPEVWAE 371 (419)
T ss_dssp -------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCC------CHHHHTT
T ss_pred ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCC------Cchhhcc
Confidence 24568999999999864 56788999999999999999999988643211 111111000 0001123
Q ss_pred hHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 147 DGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 147 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
++..+.+++.+||+.||.+|||+.++++
T Consensus 372 ~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 372 VSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 4578999999999999999999999986
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=224.21 Aligned_cols=165 Identities=19% Similarity=0.268 Sum_probs=127.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~ 77 (357)
+++++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 169 (276)
T 2h6d_A 93 VSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 169 (276)
T ss_dssp CCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred cCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCcceec
Confidence 468999999963 467999999999999999999999999 9999999999999999999999999987765432 3
Q ss_pred ccCCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
..||..|+|||.+.+... +.++||||||+++|+|++|..|+............... ....+..++..+.+++.
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~ 243 (276)
T 2h6d_A 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG------VFYIPEYLNRSVATLLM 243 (276)
T ss_dssp -------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred ccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC------cccCchhcCHHHHHHHH
Confidence 467899999999987654 68999999999999999999888654332221111111 01123345578999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||.+|||+.++++
T Consensus 244 ~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 244 HMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HHTCSSGGGSCCHHHHHH
T ss_pred HHccCChhhCCCHHHHHh
Confidence 999999999999999987
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=238.67 Aligned_cols=166 Identities=16% Similarity=0.240 Sum_probs=123.3
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCccC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYST 80 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~g 80 (357)
|+|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....|
T Consensus 151 ~~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~g 225 (464)
T 3ttj_A 151 ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 225 (464)
T ss_dssp EEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----C
T ss_pred CCHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcc
Confidence 45666663 25999999999999999999999999 999999999999999999999999999876543 34578
Q ss_pred CCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccc-------------------------c
Q 018348 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-------------------------T 135 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~-------------------------~ 135 (357)
|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.............+ .
T Consensus 226 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~ 305 (464)
T 3ttj_A 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA 305 (464)
T ss_dssp CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCC
T ss_pred cccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccC
Confidence 999999999998889999999999999999999999987643211100000000 0
Q ss_pred cccccCCCCc-----------hhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 DSCLEGQFTD-----------DDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 ~~~~~~~~~~-----------~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.......++. ..++.+.+|+.+||+.||++|||+.++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 306 GLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp CCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000010 12567899999999999999999999986
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=229.36 Aligned_cols=170 Identities=18% Similarity=0.307 Sum_probs=128.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
+|+|.+++.. .+..+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ...
T Consensus 83 ~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 160 (324)
T 3mtl_A 83 DKDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE 160 (324)
T ss_dssp SEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC----------
T ss_pred ccCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccc
Confidence 4688888864 4567999999999999999999999999 999999999999999999999999998765432 234
Q ss_pred cCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccc---cc--------------c
Q 018348 79 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---CL--------------E 140 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~---~~--------------~ 140 (357)
.||..|+|||++.+ ..++.++||||||+++|+|++|..||..................+ .. .
T Consensus 161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (324)
T 3mtl_A 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYP 240 (324)
T ss_dssp --CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCC
T ss_pred cCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccc
Confidence 67999999999976 467999999999999999999999887643322111111000000 00 0
Q ss_pred -------CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 141 -------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 141 -------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
......+++.+.+++.+||+.||.+|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 241 KYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0011234578899999999999999999999986
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-30 Score=239.40 Aligned_cols=181 Identities=12% Similarity=0.104 Sum_probs=139.5
Q ss_pred CCCccHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee----CCCCCeEEecCCCccccCCC
Q 018348 1 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSRDG 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill----~~~~~~kl~dfg~~~~~~~~ 75 (357)
++||+|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 46899999996432 234999999999999999999999999 9999999999999 77788999999999876544
Q ss_pred C---CccCCCCCCchhhhcC--------CCCCCcccchhHHHHHHHHHcCCCCCCcchh-----HHh---hhcccc----
Q 018348 76 K---SYSTNLAFTPPEYLRT--------GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-----DLI---RDRNLQ---- 132 (357)
Q Consensus 76 ~---~~~gt~~y~aPE~~~~--------~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-----~~~---~~~~~~---- 132 (357)
. ...||..|+|||++.+ ..++.++||||||+++|+|++|..||..... ..+ ......
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCE
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccch
Confidence 2 4568999999999865 4578899999999999999999988753211 000 000000
Q ss_pred -----------ccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 133 -----------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 133 -----------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
...........+...+..+.+++.+||+.||++||++.++++.+..+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 00001111233456778899999999999999999999999988777554
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-30 Score=225.91 Aligned_cols=169 Identities=17% Similarity=0.200 Sum_probs=132.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC----CeEEecCCCccccCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~----~~kl~dfg~~~~~~~~- 75 (357)
+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++ .+||+|||++......
T Consensus 90 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~ 166 (283)
T 3bhy_A 90 VSGGELFDFLA--EKESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 166 (283)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC
Confidence 46899999996 3567999999999999999999999999 99999999999998776 7999999998765443
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..|+................. ..........+..+.+
T Consensus 167 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 244 (283)
T 3bhy_A 167 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY--DFDEEYFSNTSELAKD 244 (283)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--CCCHHHHTTCCHHHHH
T ss_pred cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhccc--CCcchhcccCCHHHHH
Confidence 234688999999999988899999999999999999999988876433222111111100 0000111234578999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++.+||+.||++|||+.+++.
T Consensus 245 li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 245 FIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCHhHCcCHHHHHh
Confidence 999999999999999999986
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-30 Score=234.81 Aligned_cols=168 Identities=17% Similarity=0.246 Sum_probs=118.4
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCccCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++. .+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....||
T Consensus 117 ~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t 192 (367)
T 2fst_X 117 GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVAT 192 (367)
T ss_dssp CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC---------------CC
T ss_pred CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcC
Confidence 678888884 467999999999999999999999999 999999999999999999999999998765443 345789
Q ss_pred CCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-----------cccc--------c--cc
Q 018348 82 LAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------MLTD--------S--CL 139 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-----------~~~~--------~--~~ 139 (357)
..|+|||++.+ ..++.++|||||||++|+|++|+.||.............. .+.. . ..
T Consensus 193 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~ 272 (367)
T 2fst_X 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 272 (367)
T ss_dssp CTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCC
T ss_pred cCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCC
Confidence 99999999987 5789999999999999999999998876432111000000 0000 0 00
Q ss_pred c----CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 140 E----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 140 ~----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
. .......++.+.+|+.+||+.||.+|||+.+++.
T Consensus 273 ~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 273 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0 0001223567899999999999999999999986
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=231.87 Aligned_cols=154 Identities=21% Similarity=0.188 Sum_probs=118.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC--CeEEecCCCccccCC--------CCCccCCCCCCch
Q 018348 18 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG--NPRLSTFGLMKNSRD--------GKSYSTNLAFTPP 87 (357)
Q Consensus 18 l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~--~~kl~dfg~~~~~~~--------~~~~~gt~~y~aP 87 (357)
+++..+..|+.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||+++.... .....||+.|+||
T Consensus 165 ~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP 243 (345)
T 3hko_A 165 QREKLISNIMRQIFSALHYLHNQG-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCc
Confidence 467788899999999999999999 99999999999998766 899999999875432 1244689999999
Q ss_pred hhhcC--CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhcCCCC
Q 018348 88 EYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 165 (357)
Q Consensus 88 E~~~~--~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 165 (357)
|++.+ ..++.++||||||+++|+|++|..||.................. ........+++.+.+++.+||+.||.+
T Consensus 244 E~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 244 EVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLC--FENPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp HHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--TTSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred hhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccc--cCCcccccCCHHHHHHHHHHcCCChhH
Confidence 99975 56889999999999999999999988764333222111111110 011111234578999999999999999
Q ss_pred CCChhhHHH
Q 018348 166 RPNPKSLVT 174 (357)
Q Consensus 166 Rps~~~i~~ 174 (357)
||++.++++
T Consensus 322 Rps~~~~l~ 330 (345)
T 3hko_A 322 RFDAMRALQ 330 (345)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHhc
Confidence 999999986
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-29 Score=221.78 Aligned_cols=165 Identities=19% Similarity=0.210 Sum_probs=132.4
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC------CC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KS 77 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------~~ 77 (357)
++|.+++.....+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 92 ~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 170 (305)
T 2wtk_C 92 CGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170 (305)
T ss_dssp EEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECC
T ss_pred CCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCcccccccccc
Confidence 34777776555678999999999999999999999999 999999999999999999999999998765432 23
Q ss_pred ccCCCCCCchhhhcCCC--CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~--~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
..||..|+|||++.+.. .+.++||||||+++|+|++|..|+............... ....+..++..+.+++
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~------~~~~~~~~~~~l~~li 244 (305)
T 2wtk_C 171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG------SYAIPGDCGPPLSDLL 244 (305)
T ss_dssp CCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC------CCCCCSSSCHHHHHHH
T ss_pred CCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC------CCCCCCccCHHHHHHH
Confidence 45899999999998643 377999999999999999999988764332221111111 1123445567899999
Q ss_pred HHhhhcCCCCCCChhhHHHH
Q 018348 156 SRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~~ 175 (357)
.+||+.||.+|||+.++++.
T Consensus 245 ~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 245 KGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHHTCSSTTTSCCHHHHHHS
T ss_pred HHHccCChhhCCCHHHHhcC
Confidence 99999999999999999863
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=236.15 Aligned_cols=112 Identities=18% Similarity=0.242 Sum_probs=96.4
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------- 75 (357)
+|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 189 (432)
T 3n9x_A 113 DSDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVN 189 (432)
T ss_dssp SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC----------
T ss_pred CcCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccc
Confidence 579999996 4567999999999999999999999999 999999999999999999999999999865432
Q ss_pred -------------------CCccCCCCCCchhhhc-CCCCCCcccchhHHHHHHHHHcCCCC
Q 018348 76 -------------------KSYSTNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHI 117 (357)
Q Consensus 76 -------------------~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~vl~el~~g~~~ 117 (357)
...+||+.|+|||++. ...++.++|||||||++|||++|..|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p 251 (432)
T 3n9x_A 190 DLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251 (432)
T ss_dssp ---------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred cccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccc
Confidence 3456899999999864 45689999999999999999985443
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=226.29 Aligned_cols=171 Identities=16% Similarity=0.181 Sum_probs=128.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++++|.+++. ..+.+++..+..|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 84 ~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (311)
T 4agu_A 84 CDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160 (311)
T ss_dssp CSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence 46788998885 4567999999999999999999999999 999999999999999999999999998765532 2
Q ss_pred CccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc--------------------cccc
Q 018348 77 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------QMLT 135 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~--------------------~~~~ 135 (357)
...||..|+|||++.+ ..++.++||||||+++|+|++|..|+............. ....
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence 3468899999999986 567999999999999999999998886543221110000 0000
Q ss_pred cccccCC-----CCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 DSCLEGQ-----FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 ~~~~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+..... ..+.++..+.+++.+||+.||.+|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000 01234567999999999999999999999986
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.4e-30 Score=229.37 Aligned_cols=169 Identities=17% Similarity=0.221 Sum_probs=127.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC---eEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~---~kl~dfg~~~~~~~~-- 75 (357)
++||+|.+++.. .+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++. +||+|||++......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 478999999963 467999999999999999999999999 999999999999987765 999999998754321
Q ss_pred ---------CCccCCCCCCchhhhcC-----CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHh-----------hhcc
Q 018348 76 ---------KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-----------RDRN 130 (357)
Q Consensus 76 ---------~~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~-----------~~~~ 130 (357)
....||..|+|||++.+ ..++.++||||||+++|+|++|..||........ ....
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 12358999999999875 4578899999999999999999998865321000 0000
Q ss_pred ccccccccccCCCC----chhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 131 LQMLTDSCLEGQFT----DDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 131 ~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...+.... ...+ ..++..+.+++.+||+.||.+|||+.++++
T Consensus 250 ~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 250 FESIQEGK--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHCC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHhccC--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00000000 0111 124578999999999999999999999987
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=225.49 Aligned_cols=169 Identities=14% Similarity=0.152 Sum_probs=134.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
+++|+|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 106 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (314)
T 3com_A 106 CGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 183 (314)
T ss_dssp CTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence 468899999952 3568999999999999999999999999 999999999999999999999999998765433 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||..|+|||.+.+..++.++||||||+++|+|++|..|+............... . ......+..++..+.+++.
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~l~~li~ 260 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN-P--PPTFRKPELWSDNFTDFVK 260 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-C--CCCCSSGGGSCHHHHHHHH
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC-C--CcccCCcccCCHHHHHHHH
Confidence 346889999999999888999999999999999999999887653221111000000 0 0011123334578999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||.+|||+.+++.
T Consensus 261 ~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 261 QCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHTCSCTTTSCCHHHHTT
T ss_pred HHccCChhhCcCHHHHHh
Confidence 999999999999999875
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=228.77 Aligned_cols=170 Identities=20% Similarity=0.217 Sum_probs=130.6
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCcc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~~ 79 (357)
|+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 96 ~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 173 (346)
T 1ua2_A 96 TDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQV 173 (346)
T ss_dssp EEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSC
T ss_pred CCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCccc
Confidence 588888853 4567999999999999999999999999 999999999999999999999999998765432 2356
Q ss_pred CCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc--------------cccccccC---
Q 018348 80 TNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------LTDSCLEG--- 141 (357)
Q Consensus 80 gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~--- 141 (357)
||..|+|||++.+. .++.++||||||+++|+|++|..|+............... ..+.....
T Consensus 174 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (346)
T 1ua2_A 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP 253 (346)
T ss_dssp CCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCC
T ss_pred ccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccC
Confidence 89999999999764 4788999999999999999999887654322111111000 00000000
Q ss_pred C-----CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 142 Q-----FTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 142 ~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
. ....++..+.++|.+||+.||.+|||+.++++.
T Consensus 254 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 254 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 012345789999999999999999999999873
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=241.05 Aligned_cols=168 Identities=18% Similarity=0.195 Sum_probs=134.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee---CCCCCeEEecCCCccccCCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill---~~~~~~kl~dfg~~~~~~~~~- 76 (357)
++||+|.+++. ..+.+++..+..|+.||+.||.|||+.+ ++||||||+||++ +.++.+||+|||+++......
T Consensus 108 ~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 184 (484)
T 3nyv_A 108 YTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184 (484)
T ss_dssp CCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence 46899999996 4568999999999999999999999999 9999999999999 467899999999988765443
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||+.|+|||++.+ .++.++|||||||++|+|++|..||.................. ...+....+++.+.++
T Consensus 185 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~l 261 (484)
T 3nyv_A 185 MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT--FELPQWKKVSESAKDL 261 (484)
T ss_dssp HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCSGGGGGSCHHHHHH
T ss_pred cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCCcccccCCHHHHHH
Confidence 3468999999999985 6899999999999999999999998765433222111111110 0111123456789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
|.+||+.||.+|||+.+++.
T Consensus 262 i~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 262 IRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHCCCChhHCcCHHHHhh
Confidence 99999999999999999986
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-29 Score=238.85 Aligned_cols=168 Identities=17% Similarity=0.191 Sum_probs=133.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC---CCCCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~---~~~~~kl~dfg~~~~~~~~-- 75 (357)
++||+|.+++.. .+.+++..+..|+.||+.||.|||+.+ |+||||||+||+++ .++.+||+|||+++.....
T Consensus 103 ~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 478999999963 468999999999999999999999999 99999999999995 4567999999998866543
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||.................. ........+++.+.++
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA--FDLPQWRTISDDAKDL 256 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--SCSGGGGGSCHHHHHH
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCCcccCCCCHHHHHH
Confidence 24568999999999985 5899999999999999999999998765433222111111110 0111123455789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
|.+||+.||.+|||+.+++.
T Consensus 257 i~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHcCCChhhCcCHHHHhc
Confidence 99999999999999999987
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=233.28 Aligned_cols=168 Identities=19% Similarity=0.286 Sum_probs=129.6
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------- 75 (357)
+|+|.+++. .+.+++..+..|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~~~L~~~l~---~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 188 (364)
T 3qyz_A 113 ETDLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188 (364)
T ss_dssp SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTT
T ss_pred CcCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccc
Confidence 468999884 457999999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc---------------------
Q 018348 76 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------------- 133 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~--------------------- 133 (357)
....||+.|+|||++.+ ..++.++||||||+++|+|++|..||...............
T Consensus 189 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 268 (364)
T 3qyz_A 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 268 (364)
T ss_dssp CCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHH
T ss_pred cccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHH
Confidence 23468999999998765 45899999999999999999999888654221111100000
Q ss_pred --ccccc--ccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 --LTDSC--LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 --~~~~~--~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..... ........++..+.+++.+||+.||++|||+.++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 269 LSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 000011234578999999999999999999999986
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-29 Score=225.39 Aligned_cols=168 Identities=17% Similarity=0.226 Sum_probs=129.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-CeEEecCCCccccCCC---C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-~~kl~dfg~~~~~~~~---~ 76 (357)
+++++|.+++. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++ .+||+|||+++..... .
T Consensus 115 ~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~ 188 (330)
T 3nsz_A 115 VNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 188 (330)
T ss_dssp CCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC
T ss_pred cCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccc
Confidence 46889999884 4899999999999999999999999 99999999999999776 8999999999865543 2
Q ss_pred CccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhH------------------Hhhhccc------
Q 018348 77 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD------------------LIRDRNL------ 131 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~------------------~~~~~~~------ 131 (357)
...||..|+|||++.+ ..++.++||||||+++|+|++|..|+...... .+.....
T Consensus 189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (330)
T 3nsz_A 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 268 (330)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence 4468899999999987 56899999999999999999999887432100 0000000
Q ss_pred --------cccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 132 --------QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 132 --------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
............+..+++.+.++|.+||+.||.+|||+.++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000011111222235688999999999999999999999986
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=224.34 Aligned_cols=170 Identities=15% Similarity=0.221 Sum_probs=132.8
Q ss_pred CCCccHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-CCCeEEecCCCccccCCC---
Q 018348 1 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-~~~~kl~dfg~~~~~~~~--- 75 (357)
+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++. ++.+||+|||++......
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 179 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence 46899999997542 246789999999999999999999999 999999999999987 899999999998765432
Q ss_pred -CCccCCCCCCchhhhcCCC--CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~--~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
....||..|+|||++.+.. ++.++||||||+++|+|++|..||............ ..........+..++..+.
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 256 (295)
T 2clq_A 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKVHPEIPESMSAEAK 256 (295)
T ss_dssp -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH---HHHHCCCCCCCTTSCHHHH
T ss_pred ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh---hccccccccccccCCHHHH
Confidence 3456899999999997643 788999999999999999999887542211100000 0000112233445668899
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+++.+||+.||++|||+.+++.
T Consensus 257 ~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 257 AFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHHccCChhhCCCHHHHhc
Confidence 9999999999999999999875
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=226.05 Aligned_cols=166 Identities=22% Similarity=0.335 Sum_probs=127.9
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC-----
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 76 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~----- 76 (357)
.+|+|.+++.. .+.+++..+..++.|++.||.|||+.+ ++||||||+||+++ ++.+||+|||+++......
T Consensus 110 ~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~ 185 (313)
T 3cek_A 110 GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVK 185 (313)
T ss_dssp CSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCC----------
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEE-CCeEEEeeccccccccCccccccc
Confidence 57899999963 468999999999999999999999999 99999999999996 5889999999987654332
Q ss_pred -CccCCCCCCchhhhcC-----------CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCC
Q 018348 77 -SYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 144 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~-----------~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (357)
...||..|+|||.+.+ ..++.++||||||+++|+|++|..||......... .............+
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~ 262 (313)
T 3cek_A 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHEIEFP 262 (313)
T ss_dssp ----CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHCTTSCCCCC
T ss_pred cCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH---HHHHHhcccccCCc
Confidence 3458999999999875 36788999999999999999999887643221110 01111111222334
Q ss_pred chhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 145 DDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 145 ~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...+..+.+++.+||+.||.+|||+.+++.
T Consensus 263 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 263 DIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp CCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 444578999999999999999999999986
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=232.66 Aligned_cols=170 Identities=21% Similarity=0.281 Sum_probs=131.4
Q ss_pred ccHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC-CCCCeEEecCCCccccCCC---CC
Q 018348 4 ETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 4 gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~-~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
|+|.+.+.. ..++.+++..+..|+.||+.||.|||+.+ |+||||||+||+++ .++.+||+|||+++..... ..
T Consensus 122 ~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g-i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 200 (383)
T 3eb0_A 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG-ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVA 200 (383)
T ss_dssp EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCC
T ss_pred ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc-CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcC
Confidence 577777643 14678999999999999999999999999 99999999999997 6889999999999865433 34
Q ss_pred ccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-----------------------c
Q 018348 78 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------------------M 133 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-----------------------~ 133 (357)
..||..|+|||++.+. .++.++|||||||++|+|++|+.||.............. .
T Consensus 201 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~ 280 (383)
T 3eb0_A 201 YICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPT 280 (383)
T ss_dssp CCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCC
T ss_pred cccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCc
Confidence 5689999999998864 489999999999999999999998876432211111000 0
Q ss_pred cccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..........+...++.+.+|+.+||+.||.+|||+.+++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 281 LKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp CCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00011111133445678999999999999999999999985
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-29 Score=223.56 Aligned_cols=169 Identities=19% Similarity=0.206 Sum_probs=134.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---S 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---~ 77 (357)
+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++....... .
T Consensus 106 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 182 (298)
T 1phk_A 106 MKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 182 (298)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCC
T ss_pred cCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccchhhcCCCccccc
Confidence 468999999963 468999999999999999999999999 9999999999999999999999999987655432 3
Q ss_pred ccCCCCCCchhhhc------CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 78 YSTNLAFTPPEYLR------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 78 ~~gt~~y~aPE~~~------~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
..||..|+|||++. ...++.++||||||+++|+|++|..|+.................. ........++..+
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 260 (298)
T 1phk_A 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ--FGSPEWDDYSDTV 260 (298)
T ss_dssp CCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTGGGSCHHH
T ss_pred ccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcc--cCcccccccCHHH
Confidence 46889999999985 346788999999999999999999888654332221111111000 1111123456789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+||+.||.+|||+.+++.
T Consensus 261 ~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 261 KDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHccCCcccCCCHHHHHh
Confidence 99999999999999999999875
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-29 Score=221.84 Aligned_cols=167 Identities=20% Similarity=0.298 Sum_probs=126.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (303)
T 1zy4_A 97 CENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174 (303)
T ss_dssp CCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCCSCTTC------
T ss_pred CCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhc
Confidence 468999999964 3457889999999999999999999999 999999999999999999999999998765321
Q ss_pred -------------CCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcch-hHHhhhcccccccccccc
Q 018348 76 -------------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNLQMLTDSCLE 140 (357)
Q Consensus 76 -------------~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 140 (357)
....||..|+|||++.+. .++.++||||||+++|+|++ |+.... ......... . .....+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~-~-~~~~~~ 249 (303)
T 1zy4_A 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLR-S-VSIEFP 249 (303)
T ss_dssp -------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHH-S-TTCCCC
T ss_pred cccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhcc-c-cccccC
Confidence 234578999999999864 68999999999999999998 333211 111111100 0 111122
Q ss_pred CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 141 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..++...+..+.+++.+||+.||.+|||+.++++
T Consensus 250 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 250 PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 3344556678999999999999999999999987
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=227.97 Aligned_cols=157 Identities=22% Similarity=0.380 Sum_probs=130.6
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC-CCCCeEEecCCCccccCCC--CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG--KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~-~~~~~kl~dfg~~~~~~~~--~~~~ 79 (357)
+++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++||||||+||+++ .++.+||+|||+++..... ....
T Consensus 133 ~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~ 209 (320)
T 3a99_A 133 VQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 209 (320)
T ss_dssp EEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCC
T ss_pred CccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCC
Confidence 3899999963 568999999999999999999999999 99999999999998 7899999999998766543 2456
Q ss_pred CCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 80 TNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
||..|+|||++.+... +.++||||||+++|+|++|..||....... . .. ...+..++..+.+++.+|
T Consensus 210 gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~-~~----------~~~~~~~~~~~~~li~~~ 277 (320)
T 3a99_A 210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-R-GQ----------VFFRQRVSSECQHLIRWC 277 (320)
T ss_dssp SCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH-H-CC----------CCCSSCCCHHHHHHHHHH
T ss_pred CCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh-c-cc----------ccccccCCHHHHHHHHHH
Confidence 8999999999987665 778999999999999999998886542211 1 00 112234457899999999
Q ss_pred hhcCCCCCCChhhHHH
Q 018348 159 LQYEPRERPNPKSLVT 174 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~ 174 (357)
|+.||.+|||+.+|++
T Consensus 278 l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 278 LALRPSDRPTFEEIQN 293 (320)
T ss_dssp TCSSGGGSCCHHHHHT
T ss_pred ccCChhhCcCHHHHhc
Confidence 9999999999999986
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-29 Score=226.81 Aligned_cols=170 Identities=19% Similarity=0.233 Sum_probs=127.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------- 75 (357)
+|+|.+.+.. ....+++..+..|+.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 107 ~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 184 (351)
T 3mi9_A 107 EHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184 (351)
T ss_dssp SEEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCC
T ss_pred CCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccc
Confidence 3577777753 3467999999999999999999999999 999999999999999999999999998765421
Q ss_pred -CCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc---cccccc-----------
Q 018348 76 -KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM---LTDSCL----------- 139 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~---~~~~~~----------- 139 (357)
....||..|+|||++.+ ..++.++||||||+++|+|++|..||............... ......
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 264 (351)
T 3mi9_A 185 YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 264 (351)
T ss_dssp CCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTS
T ss_pred cCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcc
Confidence 23457899999999976 45799999999999999999999888654322111110000 000000
Q ss_pred ---cCCCCch---------hHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 140 ---EGQFTDD---------DGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 140 ---~~~~~~~---------~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....... .++.+.+|+.+||+.||.+|||+.++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 265 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp SCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000000 1356889999999999999999999987
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=228.00 Aligned_cols=169 Identities=18% Similarity=0.248 Sum_probs=124.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC-----CCCCeEEecCCCccccCCC--
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-----EDGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~-----~~~~~kl~dfg~~~~~~~~-- 75 (357)
+|+|.+++. ..+.+++..+..|+.||+.||.|||+.+ |+||||||+||+++ .++.+||+|||+++.....
T Consensus 116 ~~~L~~~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 192 (329)
T 3gbz_A 116 ENDLKKYMD--KNPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR 192 (329)
T ss_dssp SEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----
T ss_pred CCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc
Confidence 368999996 3557999999999999999999999999 99999999999994 4556999999998765432
Q ss_pred --CCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccc--c--------------
Q 018348 76 --KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--D-------------- 136 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~--~-------------- 136 (357)
....||..|+|||++.+. .++.++|||||||++|+|++|..||................. .
T Consensus 193 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (329)
T 3gbz_A 193 QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK 272 (329)
T ss_dssp -------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhh
Confidence 234679999999999874 479999999999999999999988865432211111100000 0
Q ss_pred --------ccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 137 --------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 137 --------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.......+..++..+.+++.+||+.||.+|||+.++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 273 QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000001114578899999999999999999999986
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=235.13 Aligned_cols=170 Identities=24% Similarity=0.278 Sum_probs=128.4
Q ss_pred ccHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC-CCeEEecCCCccccCCC---CC
Q 018348 4 ETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 4 gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~-~~~kl~dfg~~~~~~~~---~~ 77 (357)
++|.+.+.. .....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+|||+++..... ..
T Consensus 137 ~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~ 215 (420)
T 1j1b_A 137 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215 (420)
T ss_dssp EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCS
T ss_pred ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCcee
Confidence 355555532 13578999999999999999999999999 9999999999999965 56899999999865433 34
Q ss_pred ccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc------------------ccccccc
Q 018348 78 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL------------------QMLTDSC 138 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~------------------~~~~~~~ 138 (357)
..||..|+|||++.+. .++.++|||||||++|||++|+.||........-.... ....-+.
T Consensus 216 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~ 295 (420)
T 1j1b_A 216 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQ 295 (420)
T ss_dssp CCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCC
T ss_pred eeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCc
Confidence 5789999999999764 68999999999999999999999987643211100000 0000000
Q ss_pred -----ccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 139 -----LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 139 -----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....++...++.+.+|+.+||+.||.+||++.+++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 296 IKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000122345678999999999999999999999885
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-29 Score=227.92 Aligned_cols=173 Identities=18% Similarity=0.182 Sum_probs=133.4
Q ss_pred CCCccHHhh------hccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCCCCeeeCCCCCeEEecCCCccccC
Q 018348 1 MPNETLAKH------LFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 73 (357)
Q Consensus 1 ~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~ 73 (357)
+++|||.++ +.......+++..+..++.|++.||.|||+ .+ ++||||||+||+++.++.+||+|||++....
T Consensus 125 ~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 203 (348)
T 2pml_X 125 MENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203 (348)
T ss_dssp CTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTTSCEEECCCTTCEECB
T ss_pred cCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCCCcEEEeccccccccc
Confidence 468899999 654336789999999999999999999999 88 9999999999999999999999999987654
Q ss_pred CC--CCccCCCCCCchhhhcCC-CCCC-cccchhHHHHHHHHHcCCCCCCcchh-HHhhhcccccccc-ccc--------
Q 018348 74 DG--KSYSTNLAFTPPEYLRTG-RVTP-ESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTD-SCL-------- 139 (357)
Q Consensus 74 ~~--~~~~gt~~y~aPE~~~~~-~~~~-~~Di~slG~vl~el~~g~~~~~~~~~-~~~~~~~~~~~~~-~~~-------- 139 (357)
.. ....||..|+|||++.+. .++. ++||||||+++|+|++|..|+..... ............. +..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 283 (348)
T 2pml_X 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPL 283 (348)
T ss_dssp TTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTT
T ss_pred cccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccc
Confidence 33 345689999999999876 5555 99999999999999999988865432 1111111111000 000
Q ss_pred ----cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 140 ----EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 140 ----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.......++..+.+++.+||+.||.+|||+.+++.
T Consensus 284 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 284 TNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00011345678999999999999999999999986
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-29 Score=237.87 Aligned_cols=168 Identities=15% Similarity=0.197 Sum_probs=133.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC---CCCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~---~~~~kl~dfg~~~~~~~~-- 75 (357)
++||+|.+++. ....+++..+..|+.||+.||.|||+.+ |+||||||+||+++. ++.+||+|||++......
T Consensus 118 ~~~g~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEII--HRMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 47899999996 3467999999999999999999999999 999999999999975 455999999998766543
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....||+.|+|||++. +.++.++|||||||++|+|++|..||.................. ........+++.+.++
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT--FDSPEWKNVSEGAKDL 271 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCSGGGTTSCHHHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCchhcccCCHHHHHH
Confidence 2456899999999987 56899999999999999999999998765443322211111110 0111112345789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
|.+||+.||.+|||+.+++.
T Consensus 272 i~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHCCCChhhCccHHHHhc
Confidence 99999999999999999875
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-29 Score=230.13 Aligned_cols=167 Identities=14% Similarity=0.213 Sum_probs=122.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++. ..+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 113 ~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 187 (371)
T 2xrw_A 113 DANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 187 (371)
T ss_dssp SEEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC--------------
T ss_pred CCCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeecccccccccccCCce
Confidence 357888774 35999999999999999999999999 999999999999999999999999998865543 2456
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccccc-----------------------
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD----------------------- 136 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~----------------------- 136 (357)
||..|+|||++.+..++.++|||||||++|+|++|..||..................
T Consensus 188 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (371)
T 2xrw_A 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 267 (371)
T ss_dssp --CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCC
T ss_pred ecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccc
Confidence 899999999999888999999999999999999999988754322111111000000
Q ss_pred ----------ccccCC---CCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 137 ----------SCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 137 ----------~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...... .+...+..+.+|+.+||+.||.+|||+.+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 268 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp CCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000000 00123578999999999999999999999986
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=233.27 Aligned_cols=159 Identities=21% Similarity=0.291 Sum_probs=125.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC-CCCCeEEecCCCccccCCC---CCccCCCCCCchhhh
Q 018348 15 THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYL 90 (357)
Q Consensus 15 ~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~-~~~~~kl~dfg~~~~~~~~---~~~~gt~~y~aPE~~ 90 (357)
...+++..+..++.||+.||.|||+.+ |+||||||+||+++ .++.+||+|||+++..... ....||+.|+|||++
T Consensus 135 ~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~ 213 (394)
T 4e7w_A 135 KQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELI 213 (394)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHH
Confidence 568999999999999999999999999 99999999999998 7899999999999865433 345789999999999
Q ss_pred cCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-----------------------ccccccccCCCCch
Q 018348 91 RTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------------------MLTDSCLEGQFTDD 146 (357)
Q Consensus 91 ~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~ 146 (357)
.+. .++.++|||||||++|+|++|+.||.............. ..........++..
T Consensus 214 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (394)
T 4e7w_A 214 FGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPR 293 (394)
T ss_dssp TTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTT
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhcccc
Confidence 764 589999999999999999999999876432111000000 00000111112333
Q ss_pred hHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 147 DGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 147 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.++.+.+|+.+||+.||.+|||+.+++.
T Consensus 294 ~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 294 TPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 5678999999999999999999999986
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-29 Score=222.74 Aligned_cols=168 Identities=18% Similarity=0.265 Sum_probs=121.8
Q ss_pred CccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---
Q 018348 3 NETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 76 (357)
Q Consensus 3 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~--- 76 (357)
+|+|.+++... ....+++..+..|+.|++.||.|||++ + ++||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (290)
T 3fme_A 89 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167 (290)
T ss_dssp SEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred ccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCccccccccccc
Confidence 36787777432 457899999999999999999999998 8 9999999999999999999999999987654432
Q ss_pred CccCCCCCCchhhh----cCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 SYSTNLAFTPPEYL----RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ~~~gt~~y~aPE~~----~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...||..|+|||++ .+..++.++||||||+++|+|++|..|+............ ..........+..++..+.
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 244 (290)
T 3fme_A 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ---VVEEPSPQLPADKFSAEFV 244 (290)
T ss_dssp --CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH---HHHSCCCCCCTTTSCHHHH
T ss_pred ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH---HhccCCCCcccccCCHHHH
Confidence 34689999999997 4456888999999999999999999888642211110000 0001111112234557899
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+++.+||+.||.+|||+.++++
T Consensus 245 ~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 245 DFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHhhcChhhCcCHHHHHh
Confidence 9999999999999999999876
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=227.31 Aligned_cols=165 Identities=18% Similarity=0.242 Sum_probs=130.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC---eEEecCCCccccCCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~---~kl~dfg~~~~~~~~~- 76 (357)
+++|+|.+++. ..+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++. +||+|||+++......
T Consensus 96 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 172 (322)
T 2ycf_A 96 MEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172 (322)
T ss_dssp CTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHH
T ss_pred CCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCccceecccccc
Confidence 46899999996 4578999999999999999999999999 999999999999986654 9999999988765442
Q ss_pred --CccCCCCCCchhhhc---CCCCCCcccchhHHHHHHHHHcCCCCCCcchhH-----HhhhccccccccccccCCCCch
Q 018348 77 --SYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDD 146 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 146 (357)
...||..|+|||++. ...++.++||||||+++|+|++|..||...... ......... .+ ..+..
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~----~~~~~ 246 (322)
T 2ycf_A 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF--IP----EVWAE 246 (322)
T ss_dssp HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCC--CH----HHHTT
T ss_pred cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcccc--Cc----hhhhh
Confidence 345899999999974 356789999999999999999999887643211 111111000 00 01123
Q ss_pred hHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 147 DGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 147 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
++..+.+++.+||+.||++|||+.+++.
T Consensus 247 ~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 247 VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 4578999999999999999999999875
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-29 Score=223.49 Aligned_cols=160 Identities=22% Similarity=0.393 Sum_probs=132.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC-CCCCeEEecCCCccccCCC--CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG--KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~-~~~~~kl~dfg~~~~~~~~--~~ 77 (357)
+++++|.+++.. .+.+++..++.++.||+.||.|||+.+ ++||||||+||+++ .++.+||+|||+++..... ..
T Consensus 121 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~ 197 (312)
T 2iwi_A 121 LPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTD 197 (312)
T ss_dssp SSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCC
T ss_pred CCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccc
Confidence 368999999963 457999999999999999999999999 99999999999998 8899999999998766543 34
Q ss_pred ccCCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
..||..|+|||++.+..+ +.++||||||+++|+|++|..||....... .. ....+..++..+.+++.
T Consensus 198 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~----------~~~~~~~~~~~~~~li~ 265 (312)
T 2iwi_A 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL--EA----------ELHFPAHVSPDCCALIR 265 (312)
T ss_dssp CCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH--HT----------CCCCCTTSCHHHHHHHH
T ss_pred cCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHh--hh----------ccCCcccCCHHHHHHHH
Confidence 568999999999987665 458999999999999999998876532211 11 11223345578999999
Q ss_pred HhhhcCCCCCCChhhHHHH
Q 018348 157 RCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~~ 175 (357)
+||+.||++|||+.+++..
T Consensus 266 ~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 266 RCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HHTCSSTTTSCCHHHHHHS
T ss_pred HHccCChhhCcCHHHHhcC
Confidence 9999999999999999873
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-29 Score=224.54 Aligned_cols=169 Identities=17% Similarity=0.179 Sum_probs=130.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccC----CCC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGK 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~----~~~ 76 (357)
+++|+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.... ...
T Consensus 98 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 98 CPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp CTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred CCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 478999999853 3567999999999999999999999999 9999999999999999999999999865321 223
Q ss_pred CccCCCCCCchhhhc-----CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
...||..|+|||++. +..++.++||||||+++|+|++|..|+................ ......+..++..+
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l 252 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD---PPTLLTPSKWSVEF 252 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC---CCCCSSGGGSCHHH
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccC---CcccCCccccCHHH
Confidence 456899999999984 4668899999999999999999998876543221111111000 00111233456789
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+||+.||.+|||+.++++
T Consensus 253 ~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 253 RDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HHHHHHHSCSCTTTSCCHHHHTT
T ss_pred HHHHHHHcccChhhCCCHHHHhc
Confidence 99999999999999999998875
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-29 Score=225.32 Aligned_cols=170 Identities=18% Similarity=0.233 Sum_probs=113.6
Q ss_pred ccHHhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC---
Q 018348 4 ETLAKHLFH---WETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 76 (357)
Q Consensus 4 gsL~~~l~~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~--- 76 (357)
|+|.+++.. .....+++..+..++.|++.||.|||+. + ++||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 183 (327)
T 3aln_A 105 TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT 183 (327)
T ss_dssp EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC--------
T ss_pred CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceecccccccc
Confidence 577777642 2357899999999999999999999998 8 9999999999999999999999999987654432
Q ss_pred CccCCCCCCchhhh----cCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 SYSTNLAFTPPEYL----RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ~~~gt~~y~aPE~~----~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...||..|+|||++ .+..++.++||||||+++|+|++|..|+..................+.+.......++..+.
T Consensus 184 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 263 (327)
T 3aln_A 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFI 263 (327)
T ss_dssp ----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHH
T ss_pred cCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHH
Confidence 33689999999998 44568899999999999999999998886532211101111111111112222234568899
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+++.+||+.||.+|||+.+++.
T Consensus 264 ~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 264 NFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHhhCChhhCcCHHHHHh
Confidence 9999999999999999999876
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=236.45 Aligned_cols=168 Identities=14% Similarity=0.168 Sum_probs=134.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC---CeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~---~~kl~dfg~~~~~~~~-- 75 (357)
++||+|.+++. ..+.+++..+..|+.||+.||.|||+.+ |+||||||+||+++.++ .+||+|||++......
T Consensus 128 ~~gg~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 204 (504)
T 3q5i_A 128 YEGGELFEQII--NRHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204 (504)
T ss_dssp CTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCc
Confidence 47899999996 3567999999999999999999999999 99999999999998765 6999999999876544
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
....||+.|+|||++. +.++.++|||||||++|+|++|..||................... .......+++.+.++
T Consensus 205 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~l 281 (504)
T 3q5i_A 205 LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF--DFNDWKNISDEAKEL 281 (504)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CHHHHTTSCHHHHHH
T ss_pred cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--CccccCCCCHHHHHH
Confidence 3456899999999987 568999999999999999999999987654333222211111000 000112345789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+||+.||.+|||+.+++.
T Consensus 282 i~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 282 IKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHcCCChhHCCCHHHHhc
Confidence 99999999999999999986
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-29 Score=227.24 Aligned_cols=167 Identities=16% Similarity=0.236 Sum_probs=129.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------- 75 (357)
+|+|.+++. .+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 172 (353)
T 2b9h_A 97 QTDLHRVIS---TQMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172 (353)
T ss_dssp SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC---------
T ss_pred CccHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccccccccCc
Confidence 468998885 357999999999999999999999999 999999999999999999999999998765422
Q ss_pred -------CCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc------------cc--
Q 018348 76 -------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL------------QM-- 133 (357)
Q Consensus 76 -------~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~------------~~-- 133 (357)
....||..|+|||++.+ ..++.++||||||+++|+|++|..||............. ..
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (353)
T 2b9h_A 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252 (353)
T ss_dssp -------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCC
T ss_pred cccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccc
Confidence 12357899999998865 568999999999999999999998887643211100000 00
Q ss_pred ----------c---ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 ----------L---TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 ----------~---~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
. ..... ....+.+++.+.+++.+||+.||++|||+.++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 253 SPRAREYIKSLPMYPAAPL-EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CHHHHHHHHTSCCCCCCCH-HHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cchhhHHhhcccCCCCcch-hhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 00000 0011245578999999999999999999999986
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-28 Score=227.09 Aligned_cols=167 Identities=18% Similarity=0.241 Sum_probs=126.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCccCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~gt 81 (357)
+|+|.+++. ..+++..+..|+.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....||
T Consensus 130 ~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t 204 (371)
T 4exu_A 130 QTDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT 204 (371)
T ss_dssp CEEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCC
T ss_pred cccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccC
Confidence 367777773 35999999999999999999999999 999999999999999999999999998765543 345789
Q ss_pred CCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-----------------------ccccc
Q 018348 82 LAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------------------MLTDS 137 (357)
Q Consensus 82 ~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-----------------------~~~~~ 137 (357)
..|+|||++.+ ..++.++||||||+++|+|++|..||.............. .....
T Consensus 205 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (371)
T 4exu_A 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT 284 (371)
T ss_dssp CTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCC
T ss_pred ccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCC
Confidence 99999999987 5789999999999999999999998875432111111000 00000
Q ss_pred cc--cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 138 CL--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 138 ~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.. .......+++.+.+|+.+||+.||++|||+.+++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 285 PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00 00112234578999999999999999999999986
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-29 Score=228.38 Aligned_cols=170 Identities=14% Similarity=0.212 Sum_probs=125.2
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~ 79 (357)
+|+|.+++.. ....+++..+..|+.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....
T Consensus 117 ~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 194 (362)
T 3pg1_A 117 RTDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV 194 (362)
T ss_dssp SEEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCTTC--------------
T ss_pred CCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEEcCCCCEEEEecCcccccccccccceec
Confidence 4788888863 4568999999999999999999999999 999999999999999999999999998754433 2346
Q ss_pred CCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc-----------------------ccc
Q 018348 80 TNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------------------MLT 135 (357)
Q Consensus 80 gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~-----------------------~~~ 135 (357)
||..|+|||++.+ ..++.++||||||+++|+|++|..||.............. ...
T Consensus 195 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (362)
T 3pg1_A 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSL 274 (362)
T ss_dssp -CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCC
T ss_pred ccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhc
Confidence 7899999999987 5689999999999999999999998875432111111000 000
Q ss_pred ccc---ccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 DSC---LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 ~~~---~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
... .....+...++.+.+++.+||+.||.+|||+.++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 275 SNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp CCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 000 000112234577999999999999999999999986
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-28 Score=223.03 Aligned_cols=166 Identities=19% Similarity=0.239 Sum_probs=126.1
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCccCCC
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNL 82 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~gt~ 82 (357)
|+|.+++. ..+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ....+|.
T Consensus 113 ~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~ 187 (353)
T 3coi_A 113 TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 187 (353)
T ss_dssp EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSB
T ss_pred CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCc
Confidence 57777763 35999999999999999999999999 999999999999999999999999998765443 3456899
Q ss_pred CCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccc-----------------------cccccc-
Q 018348 83 AFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-----------------------QMLTDS- 137 (357)
Q Consensus 83 ~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~-----------------------~~~~~~- 137 (357)
.|+|||++.+ ..++.++||||||+++|+|++|..||............. ..+...
T Consensus 188 ~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
T 3coi_A 188 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP 267 (353)
T ss_dssp CCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCS
T ss_pred CcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCC
Confidence 9999999987 568999999999999999999998886532211100000 000000
Q ss_pred -cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 138 -CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 138 -~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.........+++.+.+++.+||+.||++|||+.+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 268 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp SCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0001123345688999999999999999999999985
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=223.87 Aligned_cols=170 Identities=21% Similarity=0.254 Sum_probs=129.0
Q ss_pred ccHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCceecCCCCCCeeeCC-CCCeEEecCCCccccCCCC--
Q 018348 4 ETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCT--SKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 4 gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~lH--~~~~~~H~dlk~~Nill~~-~~~~kl~dfg~~~~~~~~~-- 76 (357)
|+|.+.+.. .....+++..+..++.|++.||.||| +.+ ++||||||+||+++. ++.+||+|||+++......
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~ 188 (360)
T 3e3p_A 110 DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN 188 (360)
T ss_dssp CBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCC
T ss_pred ccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCc
Confidence 444444422 24568999999999999999999999 888 999999999999996 8999999999998765433
Q ss_pred -CccCCCCCCchhhhcCCC-CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccc--------------------
Q 018348 77 -SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-------------------- 134 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~-------------------- 134 (357)
...||..|+|||++.+.. ++.++||||||+++|+|++|..||................
T Consensus 189 ~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
T 3e3p_A 189 VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDL 268 (360)
T ss_dssp CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGG
T ss_pred ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccc
Confidence 456899999999997654 7999999999999999999998887643221111110000
Q ss_pred ------ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 135 ------TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 135 ------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.-.......+...+..+.+|+.+||+.||.+|||+.++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 269 YNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp GCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000111223345788999999999999999999999886
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-28 Score=229.24 Aligned_cols=171 Identities=15% Similarity=0.234 Sum_probs=120.1
Q ss_pred CccHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeee----CCCCCeEEecCCCccc
Q 018348 3 NETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKN 71 (357)
Q Consensus 3 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill----~~~~~~kl~dfg~~~~ 71 (357)
+|+|.+++... ....+++..+..|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 103 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 181 (405)
T 3rgf_A 103 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 181 (405)
T ss_dssp SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence 45777776421 1235999999999999999999999999 9999999999999 6778999999999976
Q ss_pred cCCC-------CCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhc---------c----
Q 018348 72 SRDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR---------N---- 130 (357)
Q Consensus 72 ~~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~---------~---- 130 (357)
.... ....||+.|+|||++.+. .++.++|||||||++|+|++|..||........... .
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~ 261 (405)
T 3rgf_A 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 261 (405)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHH
T ss_pred cCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhh
Confidence 5432 235689999999999874 489999999999999999999988854321100000 0
Q ss_pred -------cccc-------------cccccc--------CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 131 -------LQML-------------TDSCLE--------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 131 -------~~~~-------------~~~~~~--------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+..+ ...... .......+..+.+||.+||+.||.+|||+.++++
T Consensus 262 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 262 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp CCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 000000 0001111457889999999999999999999987
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-28 Score=230.21 Aligned_cols=169 Identities=21% Similarity=0.220 Sum_probs=121.5
Q ss_pred CccHHhhhccCCCCC-----CCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC-------------CCeEEe
Q 018348 3 NETLAKHLFHWETHP-----MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-------------GNPRLS 64 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~-----l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~-------------~~~kl~ 64 (357)
+|||.+++....... .++..++.|+.||+.||.|||+.+ |+||||||+||+++.+ +.+||+
T Consensus 92 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 92 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 579999996432111 133356789999999999999999 9999999999999654 479999
Q ss_pred cCCCccccCCCC--------CccCCCCCCchhhhcC-------CCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhh
Q 018348 65 TFGLMKNSRDGK--------SYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRD 128 (357)
Q Consensus 65 dfg~~~~~~~~~--------~~~gt~~y~aPE~~~~-------~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~ 128 (357)
|||+++...... ...||..|+|||++.+ ..++.++|||||||++|||++ |..|+.........
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~- 249 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN- 249 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH-
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH-
Confidence 999998765432 2468999999999975 568899999999999999999 78777543222110
Q ss_pred cccccc-ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 129 RNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 129 ~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..... ..+......+..++..+.++|.+||+.||.+|||+.+|+.
T Consensus 250 -i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 250 -IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -HHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 00000 0111111223456788999999999999999999999885
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=220.97 Aligned_cols=168 Identities=18% Similarity=0.233 Sum_probs=127.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC-CCCCeEEecCCCccccCCC------
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG------ 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~-~~~~~kl~dfg~~~~~~~~------ 75 (357)
+|+|.+++. .+++++..+..++.|++.||.|||+.+ ++||||||+||+++ .++.+||+|||+++.....
T Consensus 105 ~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 180 (320)
T 2i6l_A 105 ETDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGH 180 (320)
T ss_dssp SEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------C
T ss_pred CCCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccc
Confidence 368999994 568999999999999999999999999 99999999999997 5678999999998865422
Q ss_pred -CCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccc------------------
Q 018348 76 -KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT------------------ 135 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~------------------ 135 (357)
....+|..|+|||.+.+ ..++.++||||||+++|+|++|..||.................
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (320)
T 2i6l_A 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYI 260 (320)
T ss_dssp CCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHH
T ss_pred cccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccc
Confidence 22356889999998875 5689999999999999999999988865432211111000000
Q ss_pred ccccc------CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 136 DSCLE------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 136 ~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
..... ......++..+.+++.+||+.||.+|||+.++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 261 RNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00000 0111234578999999999999999999999986
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-28 Score=215.29 Aligned_cols=168 Identities=16% Similarity=0.165 Sum_probs=130.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC---CCeEEecCCCccccCCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDGK- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~---~~~kl~dfg~~~~~~~~~- 76 (357)
+++++|.+++.. .+.+++..++.++.|++.||.|||+.+ ++||||||+||+++.+ +.+||+|||++.......
T Consensus 103 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~ 179 (287)
T 2wei_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (287)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence 468999999863 457999999999999999999999999 9999999999999754 469999999987665433
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||..|+|||.+.+ .++.++||||||+++|+|++|..|+................... .......++..+.++
T Consensus 180 ~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 256 (287)
T 2wei_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF--DLPQWRTISDDAKDL 256 (287)
T ss_dssp CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CSGGGTTSCHHHHHH
T ss_pred cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--CchhhhhcCHHHHHH
Confidence 2347889999999875 58899999999999999999998886643322211111110000 001112345789999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+||+.||++|||+.+++.
T Consensus 257 i~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 257 IRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcccChhhCcCHHHHhc
Confidence 99999999999999999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.2e-28 Score=226.53 Aligned_cols=167 Identities=18% Similarity=0.180 Sum_probs=122.1
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-----CCCeEEecCCCccccCCC--
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-----~~~~kl~dfg~~~~~~~~-- 75 (357)
+|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+||+++. ...+||+|||+++.....
T Consensus 101 ~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 101 AATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp SEEHHHHHHS-SSCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred CCCHHHHHHh-cCCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 5799999964 3345555667899999999999999999 999999999999943 235789999998765432
Q ss_pred -----CCccCCCCCCchhhhcC---CCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCch
Q 018348 76 -----KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 146 (357)
Q Consensus 76 -----~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (357)
....||+.|+|||++.+ ..++.++|||||||++|+|++ |..|+........... ....... ....+..
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~-~~~~~~~--~~~~~~~ 255 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL-LGACSLD--CLHPEKH 255 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH-TTCCCCT--TSCTTCH
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH-hccCCcc--ccCcccc
Confidence 23468999999999974 457889999999999999999 7766643322221111 1110000 0111234
Q ss_pred hHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 147 DGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 147 ~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+..+.++|.+||+.||.+|||+.+|+.
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 4567889999999999999999999985
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=232.85 Aligned_cols=171 Identities=18% Similarity=0.208 Sum_probs=130.7
Q ss_pred CCCccHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCC---eEEecCCCccccCCC-
Q 018348 1 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~---~kl~dfg~~~~~~~~- 75 (357)
++||||.+++.... ...+++..+..|+.|++.||.|||+.+ ++||||||+||+++.++. +||+|||++......
T Consensus 100 ~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~ 178 (676)
T 3qa8_A 100 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE 178 (676)
T ss_dssp CSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC
T ss_pred CCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEccccccccccccc
Confidence 47899999997533 347999999999999999999999999 999999999999987665 899999998876543
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH-hhhc---------ccc----cc----c
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDR---------NLQ----ML----T 135 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~-~~~~---------~~~----~~----~ 135 (357)
....||..|+|||++.+..++.++||||||+++|+|++|..||....... +... ... .. .
T Consensus 179 ~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~ 258 (676)
T 3qa8_A 179 LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSS 258 (676)
T ss_dssp CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCS
T ss_pred ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcccccccc
Confidence 24568999999999998889999999999999999999998886431111 0000 000 00 0
Q ss_pred cccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhH
Q 018348 136 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172 (357)
Q Consensus 136 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 172 (357)
........+...+..+.+++.+||..||++|||+.++
T Consensus 259 ~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 259 VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp SSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred ccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0011123445578899999999999999999999773
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.3e-28 Score=216.67 Aligned_cols=166 Identities=21% Similarity=0.295 Sum_probs=118.5
Q ss_pred ccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCcc
Q 018348 4 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 79 (357)
Q Consensus 4 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~ 79 (357)
+++..++ ....+.+++..+..++.|++.||.|||++ + ++||||||+||+++.++.+||+|||++...... ....
T Consensus 108 ~~~~~l~-~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 185 (318)
T 2dyl_A 108 TCAEKLK-KRMQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185 (318)
T ss_dssp EEHHHHH-HHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC-------------
T ss_pred CcHHHHH-HHhccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccC
Confidence 3444443 22356899999999999999999999996 8 999999999999999999999999998765433 2346
Q ss_pred CCCCCCchhhhc-----CCCCCCcccchhHHHHHHHHHcCCCCCCcchhH-HhhhccccccccccccCCCCchhHHHHHH
Q 018348 80 TNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 80 gt~~y~aPE~~~-----~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
||..|+|||++. ...++.++||||||+++|+|++|..||...... .......... .+.. .....++..+.+
T Consensus 186 ~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~l~~ 262 (318)
T 2dyl_A 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE-PPLL--PGHMGFSGDFQS 262 (318)
T ss_dssp -CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC-CCCC--CSSSCCCHHHHH
T ss_pred CCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC-CCCC--CccCCCCHHHHH
Confidence 899999999995 346788999999999999999999888642211 1111111110 0001 111234578999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++.+||+.||.+|||+.++++
T Consensus 263 li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 263 FVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHccCChhHCcCHHHHhh
Confidence 999999999999999999876
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-27 Score=212.65 Aligned_cols=153 Identities=16% Similarity=0.209 Sum_probs=119.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC---CCCeEEecCCCccccCCCCC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDGKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~---~~~~kl~dfg~~~~~~~~~~ 77 (357)
++||+|.+++.......+++..+..|+.|++.||.|||+.+ ++||||||+||+++. ++.+||+|||++....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---- 171 (299)
T 3m2w_A 97 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---- 171 (299)
T ss_dssp CCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEeccccccccc----
Confidence 46899999998655668999999999999999999999999 999999999999997 7889999999876532
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCC----chhHHHHHH
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT----DDDGTELVR 153 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~ 153 (357)
+..++.++||||||+++|+|++|..||...............+..... ..+ ..++..+.+
T Consensus 172 --------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 235 (299)
T 3m2w_A 172 --------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY--EFPNPEWSEVSEEVKM 235 (299)
T ss_dssp --------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCC--SSCHHHHTTSCHHHHH
T ss_pred --------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccc--cCCchhcccCCHHHHH
Confidence 245788999999999999999999888654332221111111111111 111 235678999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
++.+||+.||.+|||+.+++.
T Consensus 236 li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 236 LIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHcccChhhCCCHHHHhc
Confidence 999999999999999999986
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.7e-26 Score=200.58 Aligned_cols=154 Identities=16% Similarity=0.126 Sum_probs=115.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 80 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~g 80 (357)
++||+|.+++. .+ ....++..|+.|++.||.|||+.+ ++||||||+||+++.+|.+||+++|
T Consensus 113 ~~g~~L~~~l~---~~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~------------- 174 (286)
T 3uqc_A 113 IRGGSLQEVAD---TS-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA------------- 174 (286)
T ss_dssp CCEEEHHHHHT---TC-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC-------------
T ss_pred cCCCCHHHHHh---cC-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc-------------
Confidence 47899999994 23 356678999999999999999999 9999999999999999999998544
Q ss_pred CCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccccc-ccccCCCCchhHHHHHHHHHHhh
Q 018348 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD-SCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 81 t~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl 159 (357)
|++ .++.++||||||+++|+|++|+.||.................. ..........+++.+.+++.+||
T Consensus 175 ---~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 244 (286)
T 3uqc_A 175 ---TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSV 244 (286)
T ss_dssp ---CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHH
T ss_pred ---ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHc
Confidence 332 3688999999999999999999988754321100000010000 00001122345678999999999
Q ss_pred hcCCCCCCChhhHHHHhcccccCC
Q 018348 160 QYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 160 ~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
+.||.+| |+.++++.|+.+....
T Consensus 245 ~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 245 QGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp CTTSSCC-CHHHHHHHHHHHHC--
T ss_pred ccCCccC-CHHHHHHHHHHHhccC
Confidence 9999999 9999999998876543
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-25 Score=203.10 Aligned_cols=161 Identities=12% Similarity=0.058 Sum_probs=120.3
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCceecCCCCCCeeeCCCC--------------------C
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT-SKGRALYHDLNAYRILFDEDG--------------------N 60 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~~~~H~dlk~~Nill~~~~--------------------~ 60 (357)
++|+|.+.+. .+.+++..+..|+.||+.||.||| +.+ |+||||||+|||++.++ .
T Consensus 145 ~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (336)
T 2vuw_A 145 FGGIDLEQMR---TKLSSLATAKSILHQLTASLAVAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQ 220 (336)
T ss_dssp CCCEETGGGT---TTCCCHHHHHHHHHHHHHHHHHHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEE
T ss_pred CCCccHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCce
Confidence 5787666663 367899999999999999999999 898 99999999999999887 8
Q ss_pred eEEecCCCccccCCCCCccCCCCCCchhhhcCCCCCCcccchhHHHH-HHHHHcCCCCCCcchh-HHhhhccccc-cccc
Q 018348 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTL-LLDLLSGKHIPPSHAL-DLIRDRNLQM-LTDS 137 (357)
Q Consensus 61 ~kl~dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~v-l~el~~g~~~~~~~~~-~~~~~~~~~~-~~~~ 137 (357)
+||+|||+++..... ...||..|+|||++.+.. +.++|||||+++ .+++++|..|+..... .......... ....
T Consensus 221 vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 298 (336)
T 2vuw_A 221 VSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT 298 (336)
T ss_dssp EEECCCTTCBEEETT-EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS
T ss_pred EEEeeccccEecCCC-cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc
Confidence 999999999876543 457899999999998655 889999998777 7778888877643211 0010111100 0111
Q ss_pred cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHH
Q 018348 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173 (357)
Q Consensus 138 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~ 173 (357)
......+..+++.+.+||.+||+.| |+.+++
T Consensus 299 ~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 299 KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 1111123357789999999999976 888877
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=156.60 Aligned_cols=110 Identities=20% Similarity=0.249 Sum_probs=106.0
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
.+.++.++++|+.++++|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg 88 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKA 88 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence 467889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
.++..+|++++|+.+|++|++++|++..++.
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~ 119 (126)
T 4gco_A 89 ACLVAMREWSKAQRAYEDALQVDPSNEEARE 119 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCcCCHHHHH
Confidence 9999999999999999999999999987753
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=153.18 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=104.5
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc-----------chHHHhhHHHHHHhcCChHHHHHHHHHHHHh
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----------SPTVYARRSLCYLMSDMPQDALNDAMQAQII 312 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~-----------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l 312 (357)
.+..+..+.+.|+.+++.|+|++|+..|++||+++|++ ++.+|+|+|.++..+|++++|+.+|++||++
T Consensus 7 ~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 7 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 35678899999999999999999999999999999982 1239999999999999999999999999999
Q ss_pred -------CCCchHHH----HHHHHHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 313 -------SPIWHIAS----YLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 313 -------~p~~~~a~----~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+|+++++| +++|.++..+|++++|+.+|++|++++|++.....
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999 99999999999999999999999999999987654
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.5e-23 Score=198.85 Aligned_cols=108 Identities=14% Similarity=0.180 Sum_probs=77.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||||.++|. ..++++.. +|+.||+.||.|+|+++ ||||||||+|||++.+|.+||+|||+++......
T Consensus 324 v~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~ 397 (569)
T 4azs_A 324 LPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPT 397 (569)
T ss_dssp CCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSH
T ss_pred CCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCcccc
Confidence 68999999996 46778764 58899999999999999 9999999999999999999999999998765432
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCC
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~ 115 (357)
+.+||+.||+||++.+ .+..++|+||+|++++++.++.
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 3468999999999985 5677899999999988776653
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=144.97 Aligned_cols=108 Identities=6% Similarity=-0.103 Sum_probs=103.8
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
-..+.+..++..|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..|++|++++|+++.+|++
T Consensus 31 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~ 109 (151)
T 3gyz_A 31 IPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFH 109 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHH
Confidence 34578889999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
+|.+|..+|++++|+.+|++|++++|+..
T Consensus 110 lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 110 TGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999998764
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=139.12 Aligned_cols=105 Identities=15% Similarity=0.130 Sum_probs=98.9
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch-------
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH------- 317 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~------- 317 (357)
.+.+.++++.|+.++++|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|++++++|++++|++.
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 467888999999999999999999999999999999 899999999999999999999999999999998763
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 318 IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 318 ~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
.+|+++|.++..+|+|++|+++|+++++++|+.
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 589999999999999999999999999988753
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-19 Score=144.78 Aligned_cols=108 Identities=24% Similarity=0.234 Sum_probs=102.7
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc------------------CCCcchHHHhhHHHHHHhcCChHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------------------GTMVSPTVYARRSLCYLMSDMPQDALN 304 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~------------------~p~~~~~~~~~~a~~~~~~~~~~~A~~ 304 (357)
+..+.+..++.+|+.+++.|+|++|+..|++||++ +|. ...+|+++|.||..+|++++|+.
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~ 84 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEE 84 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHH
Confidence 55678999999999999999999999999999999 777 77899999999999999999999
Q ss_pred HHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 305 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 305 ~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
++++|++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++.
T Consensus 85 ~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 85 TSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 99999999999999999999999999999999999999999999987
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.1e-19 Score=136.17 Aligned_cols=107 Identities=19% Similarity=0.189 Sum_probs=102.2
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..++.++.+|..++..|+|++|+..|+++++++|+ ++.+|.++|.+|..+|++++|+.+++++++++|+++.+|+++|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 35788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhccc------cccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLE------AKKNST 353 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~------~~~~~a 353 (357)
++..+|++++|+.+|+++++++ |++..+
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 9999999999999999999999 766544
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.5e-18 Score=139.16 Aligned_cols=110 Identities=25% Similarity=0.293 Sum_probs=105.6
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
....+..++.+|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 85 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRL 85 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3467889999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 324 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
|.+|..+|++++|+.+|+++++++|++..+|
T Consensus 86 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 86 GLARFDMADYKGAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 9999999999999999999999999998754
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.2e-18 Score=135.18 Aligned_cols=108 Identities=11% Similarity=0.017 Sum_probs=103.3
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
.+.+..++..|..++..|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..|++++.++|+++.+|+++|
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 96 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAA 96 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 466788999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
.+|..+|++++|+.+|+++++++|++...
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCCCcc
Confidence 99999999999999999999999987643
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-18 Score=138.36 Aligned_cols=111 Identities=11% Similarity=0.083 Sum_probs=103.5
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
...+.+..++..|..+++.|+|++|+..|+++|+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|++
T Consensus 26 ~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 104 (150)
T 4ga2_A 26 SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLK 104 (150)
T ss_dssp SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHH
Confidence 33466778899999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHH-HHHhhcccccccccc
Q 018348 323 QAAALSAMGMENEAQVA-LKEGTTLEAKKNSTA 354 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~-~~~al~l~~~~~~a~ 354 (357)
+|.+|..+|++++|... +++|++++|++..++
T Consensus 105 la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~ 137 (150)
T 4ga2_A 105 IAELLCKNDVTDGRAKYWVERAAKLFPGSPAVY 137 (150)
T ss_dssp HHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHH
Confidence 99999999999987776 599999999998654
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.8e-18 Score=132.69 Aligned_cols=108 Identities=10% Similarity=0.061 Sum_probs=103.3
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+..++..|..++..|+|++|+..|+++++.+|+ ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 93 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAA 93 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHH
Confidence 356778899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
.++..+|++++|+.+|+++++++|++...
T Consensus 94 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 122 (142)
T 2xcb_A 94 ECHLQLGDLDGAESGFYSARALAAAQPAH 122 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCcch
Confidence 99999999999999999999999987654
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.75 E-value=9.9e-18 Score=128.73 Aligned_cols=104 Identities=12% Similarity=0.055 Sum_probs=94.1
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
...++.+|..+++.|++++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..++++++++|+++.+|+++|.++
T Consensus 17 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~ 95 (121)
T 1hxi_A 17 HENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSH 95 (121)
T ss_dssp CSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 345788999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHhhcccccccc
Q 018348 328 SAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 328 ~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
..+|++++|+..|+++++++|++..
T Consensus 96 ~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 96 TNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHHC-------
T ss_pred HHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999998754
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.9e-17 Score=138.52 Aligned_cols=107 Identities=16% Similarity=0.019 Sum_probs=101.6
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhh----------------HHHHHHhcCChHHHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYAR----------------RSLCYLMSDMPQDALNDAMQAQ 310 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~----------------~a~~~~~~~~~~~A~~~~~~al 310 (357)
.+..+..+|..++..|+|++|+..|+++++++|+ ++.+|+. +|.+|..+|++++|+..|++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4677889999999999999999999999999999 8899998 9999999999999999999999
Q ss_pred HhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 311 IISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 311 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+++|+++.+|+++|.++..+|++++|+.+|+++++++|++..++
T Consensus 82 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~ 125 (208)
T 3urz_A 82 QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAAN 125 (208)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999999999999999999998765
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-16 Score=123.83 Aligned_cols=105 Identities=23% Similarity=0.370 Sum_probs=101.0
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..++..|..++..|+|++|+..|+++++++|+ +..+++++|.++..+|++++|+.+++++++++|+++.+|+++|.
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 85 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 85 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 45778999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
++..+|++++|+.+|+++++++|++.
T Consensus 86 ~~~~~~~~~~A~~~~~~a~~~~p~~~ 111 (137)
T 3q49_B 86 CQLEMESYDEAIANLQRAYSLAKEQR 111 (137)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhHHHHHHHHHHHHHHChhHH
Confidence 99999999999999999999999843
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.9e-16 Score=132.10 Aligned_cols=113 Identities=19% Similarity=0.226 Sum_probs=106.6
Q ss_pred hhhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcch----------------HHHhhHHHHHHhcCChHHHHH
Q 018348 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----------------TVYARRSLCYLMSDMPQDALN 304 (357)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~----------------~~~~~~a~~~~~~~~~~~A~~ 304 (357)
..+..+.+..+...|..++..|+|++|+..|++++++.|. ++ .++.++|.+|..+|++++|+.
T Consensus 31 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 109 (198)
T 2fbn_A 31 DEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAID 109 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3566788999999999999999999999999999999998 66 899999999999999999999
Q ss_pred HHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 305 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 305 ~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+++++++++|+++.+++++|.++..+|+|++|+.+|+++++++|++..++
T Consensus 110 ~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 159 (198)
T 2fbn_A 110 HASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 159 (198)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHH
Confidence 99999999999999999999999999999999999999999999987654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=9.4e-17 Score=159.01 Aligned_cols=111 Identities=17% Similarity=0.074 Sum_probs=104.7
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
..+.+..+.++|..+.+.|++++|+..|++||+++|+ ++.+|+++|.+|..+|++++|++.|++|++++|+++.+|+++
T Consensus 39 ~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~L 117 (723)
T 4gyw_A 39 FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNL 117 (723)
T ss_dssp CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3467889999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 324 AAALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
|.+|..+|++++|+++|++|++++|++..++.
T Consensus 118 g~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~ 149 (723)
T 4gyw_A 118 ASIHKDSGNIPEAIASYRTALKLKPDFPDAYC 149 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCChHHHh
Confidence 99999999999999999999999999887653
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-17 Score=131.38 Aligned_cols=94 Identities=12% Similarity=0.045 Sum_probs=87.8
Q ss_pred hccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCCh----------HHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 018348 260 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMP----------QDALNDAMQAQIISPIWHIASYLQAAALSA 329 (357)
Q Consensus 260 ~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 329 (357)
+.+.|++|+..|+++++++|+ ++.+|+++|.++..++++ ++|+..|++||+++|++.++|+++|.+|..
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 456799999999999999999 999999999999999875 599999999999999999999999999999
Q ss_pred cC-----------ChHHHHHHHHHhhcccccccccc
Q 018348 330 MG-----------MENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 330 ~g-----------~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+| ++++|+++|++|++++|++...+
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~ 128 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYL 128 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 85 89999999999999999987654
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.9e-16 Score=117.66 Aligned_cols=108 Identities=26% Similarity=0.370 Sum_probs=103.2
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
+.+..++..|..++..|+|++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|+++.+++++|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 80 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAA 80 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 35678999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++..+|++++|+..|+++++++|++..++
T Consensus 81 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 109 (118)
T 1elw_A 81 ALEFLNRFEEAKRTYEEGLKHEANNPQLK 109 (118)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999987654
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.2e-16 Score=149.22 Aligned_cols=113 Identities=15% Similarity=0.176 Sum_probs=103.1
Q ss_pred hhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc---------------hHHHhhHHHHHHhcCChHHHHHHH
Q 018348 242 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDA 306 (357)
Q Consensus 242 ~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 306 (357)
......+..++.+|+.+++.|+|++|+..|++||+++|. + ..+|+|+|.||.++|++++|+.+|
T Consensus 262 ~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 340 (457)
T 1kt0_A 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECC 340 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 345578899999999999999999999999999999999 6 689999999999999999999999
Q ss_pred HHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 307 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 307 ~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
++|++++|+++++|+++|.+|..+|+|++|+.+|++|++++|++..++.
T Consensus 341 ~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~ 389 (457)
T 1kt0_A 341 DKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARL 389 (457)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHH
T ss_pred HHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999987653
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.4e-16 Score=142.95 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=105.8
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc---------------hHHHhhHHHHHHhcCChHHHHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDAM 307 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~ 307 (357)
.....+..++.+|..+++.|+|++|+..|++|++++|+ + ..+|+++|.||..+|++++|+.+|+
T Consensus 142 ~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 220 (336)
T 1p5q_A 142 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 220 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 45678899999999999999999999999999999999 6 5899999999999999999999999
Q ss_pred HHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 308 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 308 ~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..++
T Consensus 221 ~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 267 (336)
T 1p5q_A 221 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 267 (336)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
Confidence 99999999999999999999999999999999999999999987654
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.2e-17 Score=131.81 Aligned_cols=100 Identities=8% Similarity=-0.076 Sum_probs=93.3
Q ss_pred HHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCh
Q 018348 254 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGME 333 (357)
Q Consensus 254 ~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~ 333 (357)
.|..+..+|++++|+..|.+++..+|+ ++..++++|.+|..+|++++|+++|+++++++|+++.+|+++|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 578888999999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccccccc
Q 018348 334 NEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 334 ~~A~~~~~~al~l~~~~~~a~ 354 (357)
++|+.+|+++++++|++..++
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~ 102 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLV 102 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999988765
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.4e-16 Score=120.25 Aligned_cols=108 Identities=26% Similarity=0.317 Sum_probs=102.9
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+.+++..|..++..|+|++|+..|+++++.+|+ +..++.++|.+|...|++++|+..++++++++|.++.+++++|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 35678889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++..+|++++|+.+|+++++++|++..++
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 121 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSCKEAA 121 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGGTHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCchHHH
Confidence 99999999999999999999999987654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=5.2e-16 Score=153.73 Aligned_cols=108 Identities=13% Similarity=0.073 Sum_probs=89.1
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
+.++++.+.|..+.++|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+++|++|++++|+++.+|+++|.
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~ 85 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 85 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 56777888888888888888888888888888888 78888888888888888888888888888888888888888888
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|..+|++++|+++|++|++++|++..++
T Consensus 86 ~l~~~g~~~~A~~~~~kAl~l~P~~~~a~ 114 (723)
T 4gyw_A 86 TLKEMQDVQGALQCYTRAIQINPAFADAH 114 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 88888888888888888888888877655
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-16 Score=142.55 Aligned_cols=114 Identities=11% Similarity=0.134 Sum_probs=99.2
Q ss_pred hhhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcch-----------------HHHhhHHHHHHhcCChHHHH
Q 018348 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP-----------------TVYARRSLCYLMSDMPQDAL 303 (357)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~ 303 (357)
..+..+.+..++.+|+.+++.|+|++|+..|++|+++.|+ +. .+|+++|.||..+|++++|+
T Consensus 172 ~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~ 250 (338)
T 2if4_A 172 VEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAI 250 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3566788999999999999999999999999999999998 65 38999999999999999999
Q ss_pred HHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 304 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 304 ~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
.+|+++++++|++..+|+++|.+|..+|+|++|+.+|++|++++|++..++.
T Consensus 251 ~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~ 302 (338)
T 2if4_A 251 GHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRR 302 (338)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999987764
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-16 Score=133.27 Aligned_cols=108 Identities=13% Similarity=0.144 Sum_probs=103.1
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..+...|..++..|++++|+..|+++++++|+ ++.+++++|.++..+|++++|+..++++++++|+++.+|+++|.
T Consensus 3 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 35677899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHc-----------CChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAM-----------GMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~-----------g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++..+ |++++|+..|+++++++|++..+|
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 121 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLH 121 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHH
Confidence 99999 999999999999999999987665
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-16 Score=146.26 Aligned_cols=111 Identities=9% Similarity=-0.021 Sum_probs=97.4
Q ss_pred hhHhhHHHHHHHhHHHhccC-HHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKD-LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~-~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
....+..|..+|..+...|+ +++|+..|++||+++|+ ++.+|+++|.++..+|++++|+.+|++||+++|++..+|++
T Consensus 127 ~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~ 205 (382)
T 2h6f_A 127 NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQH 205 (382)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHH
Confidence 34667788889999999996 99999999999999998 88889999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+|.++..+|++++|+.+|+++++++|++..+|.
T Consensus 206 lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~ 238 (382)
T 2h6f_A 206 RQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 238 (382)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999999999999998887764
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-15 Score=122.91 Aligned_cols=111 Identities=23% Similarity=0.304 Sum_probs=105.1
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
+..+.+..+...|..++..|+|++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|.++.+|++
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 86 (166)
T 1a17_A 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYR 86 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 44577889999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|.++..+|++++|+.+|+++++++|++..++
T Consensus 87 ~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 118 (166)
T 1a17_A 87 RAASNMALGKFRAALRDYETVVKVKPHDKDAK 118 (166)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999887654
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=8e-16 Score=121.20 Aligned_cols=107 Identities=22% Similarity=0.238 Sum_probs=102.0
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc---hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
.+..++..|..++..|+|++|+..|+++++++|+ + ..++.++|.+|..+|++++|+..++++++++|+++.+|+++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 4677889999999999999999999999999998 7 78999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 324 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
|.++..+|++++|+.+|+++++++|++..++
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 136 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLEPKNKVFQ 136 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcHHHH
Confidence 9999999999999999999999999987654
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=9e-16 Score=135.54 Aligned_cols=106 Identities=23% Similarity=0.362 Sum_probs=101.7
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
.+..++.+|..++..|+|++|+..|++|++++|+ ++.+|+++|.+|..+|++++|+.++++|++++|+++.+++++|.+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhccccccccc
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
|..+|++++|+..|+++++++|++...
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~~~~ 108 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQRLN 108 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchhh
Confidence 999999999999999999999987543
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.65 E-value=4.1e-16 Score=143.51 Aligned_cols=109 Identities=10% Similarity=-0.067 Sum_probs=105.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCC-hHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
..+..+...|..+...|++++|+..|+++|+++|+ +..+|+++|.++..+|+ +++|+.+|+++++++|+++.+|+++|
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g 173 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 173 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 56788999999999999999999999999999999 89999999999999997 99999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
.++..+|++++|+.+|++|++++|++..+|.
T Consensus 174 ~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~ 204 (382)
T 2h6f_A 174 VLVEWLRDPSQELEFIADILNQDAKNYHAWQ 204 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCccCHHHHH
Confidence 9999999999999999999999999988874
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.65 E-value=5.3e-16 Score=142.40 Aligned_cols=113 Identities=18% Similarity=0.217 Sum_probs=106.0
Q ss_pred hhhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhh----------------cCCCcchHHHhhHHHHHHhcCChHHHHH
Q 018348 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFID----------------AGTMVSPTVYARRSLCYLMSDMPQDALN 304 (357)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~----------------~~p~~~~~~~~~~a~~~~~~~~~~~A~~ 304 (357)
..+..+.+..++.+|+.+++.|+|++|+..|++|++ ++|. ...+|+++|.+|.++|++++|+.
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHH
Confidence 345667888999999999999999999999999999 7777 78999999999999999999999
Q ss_pred HHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 305 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 305 ~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++++|++++|+++++|+++|.+|..+|+|++|+.+|++|++++|++..++
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~ 344 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 344 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999999987654
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-15 Score=117.81 Aligned_cols=104 Identities=13% Similarity=0.013 Sum_probs=98.3
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcch---HHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc---hHHHHH
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---HIASYL 322 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~~ 322 (357)
+.++..|..++..|+|++|+..|+++++.+|+ +. .+++++|.++..+|++++|+..++++++.+|++ +.+++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 45788999999999999999999999999999 66 789999999999999999999999999999999 899999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
+|.++..+|++++|+..|+++++..|++..+
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 112 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQYPGSDAA 112 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCChHH
Confidence 9999999999999999999999999987654
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-15 Score=124.69 Aligned_cols=107 Identities=20% Similarity=0.165 Sum_probs=101.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.....+...|..+...++++.|+..+.++++++|+ +..++..+|.+|..+|++++|++.|+++++++|.++.+|+++|.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~ 149 (184)
T 3vtx_A 71 TSAEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGL 149 (184)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHH
Confidence 45667888999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
+|..+|++++|+.+|++|++++|++...
T Consensus 150 ~~~~~g~~~~A~~~~~~al~~~p~~a~~ 177 (184)
T 3vtx_A 150 AYEGKGLRDEAVKYFKKALEKEEKKAKY 177 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhCCccCHHH
Confidence 9999999999999999999999987643
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.1e-15 Score=114.76 Aligned_cols=110 Identities=19% Similarity=0.251 Sum_probs=104.2
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
....+..+...|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|+..+.++++++|+++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 3456788999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 324 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
|.++..+|++++|+..|+++++++|++..++
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 117 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPDNETYK 117 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCccchHHH
Confidence 9999999999999999999999999887554
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.9e-15 Score=112.85 Aligned_cols=104 Identities=12% Similarity=0.074 Sum_probs=99.2
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCC--chHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI--WHIASYLQA 324 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~--~~~a~~~~g 324 (357)
.+..+...|..++..|+|++|+..|+++++++|. +..++.++|.++..+|++++|+..++++++++|. +..+++++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 5 NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 3456788999999999999999999999999999 8999999999999999999999999999999999 999999999
Q ss_pred HHHHHc-CChHHHHHHHHHhhccccccc
Q 018348 325 AALSAM-GMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 325 ~~~~~~-g~~~~A~~~~~~al~l~~~~~ 351 (357)
.++..+ |++++|+++|+++++.+|.+.
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999999 999999999999999999865
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=5e-17 Score=156.28 Aligned_cols=105 Identities=12% Similarity=0.090 Sum_probs=90.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||||.+++.. +..|+.|++.||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 578999999952 5689999999999999999 999999999999998 9999999999887653
Q ss_pred ------CCccCCCCCCchhhhcC--CCCCCcccchhHHHHHHHHHcCCCCC
Q 018348 76 ------KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIP 118 (357)
Q Consensus 76 ------~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~~~ 118 (357)
....||+.|||||++.. ..++..+|+||..+-.++.+.++.++
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 23468999999999986 45788899999998888877665443
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.8e-15 Score=126.80 Aligned_cols=104 Identities=17% Similarity=0.102 Sum_probs=99.9
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCC-CcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT-MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
++..++.+|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+.+++++++++|++..+|+.+|.
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 84 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSA 84 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 347899999999999999999999999999998 6 78888999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
++..+|++++|+..|+++++++|++.
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999999986
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=128.02 Aligned_cols=108 Identities=13% Similarity=-0.011 Sum_probs=93.0
Q ss_pred hHhhHHHHHHHhHHHhc-----------cCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhC
Q 018348 245 MQETLNSKKKGDVAFRQ-----------KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS 313 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~-----------~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~ 313 (357)
.+.+..+...|..+... |++++|+..|+++++++|+ ++.++.++|.+|..+|++++|+..|+++++++
T Consensus 70 P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 70 PRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE 148 (217)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc
Confidence 35667788888888888 8888888888888888888 78888888888888888888888888888888
Q ss_pred CCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 314 PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 314 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+++.+++++|.++..+|++++|+..|+++++++|++..++
T Consensus 149 -~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 188 (217)
T 2pl2_A 149 -DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLR 188 (217)
T ss_dssp -CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred -cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 8888888888888888888888888888888888876554
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.61 E-value=5.7e-15 Score=124.32 Aligned_cols=97 Identities=8% Similarity=-0.030 Sum_probs=90.6
Q ss_pred HHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHc---
Q 018348 254 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAM--- 330 (357)
Q Consensus 254 ~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~--- 330 (357)
.|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+.+|+++++++|+++.+|+++|.+|+.+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999 8999999999999999999999999999999999999998888876443
Q ss_pred --------------------------------CChHHHHHHHHHhhccccccc
Q 018348 331 --------------------------------GMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 331 --------------------------------g~~~~A~~~~~~al~l~~~~~ 351 (357)
|+|++|+.+|++|++++|+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH
Confidence 568999999999999999753
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.60 E-value=7.8e-16 Score=117.15 Aligned_cols=93 Identities=12% Similarity=0.009 Sum_probs=84.4
Q ss_pred hccCHHHHHHHHHHHhhc---CCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHH
Q 018348 260 RQKDLKDAIECYTQFIDA---GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 336 (357)
Q Consensus 260 ~~~~~~~Ai~~~~~ai~~---~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A 336 (357)
..|++++|+..|++++++ +|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 688 8899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccccc
Q 018348 337 QVALKEGTTLEAKKNST 353 (357)
Q Consensus 337 ~~~~~~al~l~~~~~~a 353 (357)
+..|+++++++|++...
T Consensus 81 ~~~~~~al~~~p~~~~~ 97 (117)
T 3k9i_A 81 VELLLKIIAETSDDETI 97 (117)
T ss_dssp HHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHhCCCcHHH
Confidence 99999999999987643
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.59 E-value=9e-15 Score=120.10 Aligned_cols=109 Identities=19% Similarity=0.170 Sum_probs=92.6
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
.+.+..+...|..++..|++++|+..+.+++..+|+ ...++.++|.++...++++.|+..+.++++++|.+..+++.+|
T Consensus 36 p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg 114 (184)
T 3vtx_A 36 PNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLG 114 (184)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 456777788888888888888888888888888888 7778888888888888888888888888889999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
.++..+|++++|+++|+++++++|++..+|
T Consensus 115 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 144 (184)
T 3vtx_A 115 LVYDSMGEHDKAIEAYEKTISIKPGFIRAY 144 (184)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHhCCchhHHHHHHHHHHhcchhhhHH
Confidence 999999999999999999999999887665
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=111.82 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=98.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc-------hH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------HI 318 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~-------~~ 318 (357)
+.+..++..|..++..|+|++|+..|+++++.+|. +..++.++|.+|...|++++|+..++++++++|.+ ..
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 35678899999999999999999999999999999 89999999999999999999999999999999987 99
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHhhccccc
Q 018348 319 ASYLQAAALSAMGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 319 a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 349 (357)
+++++|.++..+|++++|+.+|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999884
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-14 Score=124.07 Aligned_cols=108 Identities=18% Similarity=0.157 Sum_probs=101.7
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch-------H
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-------I 318 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-------~ 318 (357)
.....++..|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++ .
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 45577888999999999999999999999999999 899999999999999999999999999999999999 7
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHhhccccc--ccccc
Q 018348 319 ASYLQAAALSAMGMENEAQVALKEGTTLEAK--KNSTA 354 (357)
Q Consensus 319 a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~--~~~a~ 354 (357)
+|+++|.++..+|++++|+..|+++++++|+ +..++
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 156 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDAL 156 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHH
Confidence 7999999999999999999999999999998 65554
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-14 Score=117.53 Aligned_cols=107 Identities=14% Similarity=0.072 Sum_probs=101.6
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHH-HHhcCCh--HHHHHHHHHHHHhCCCchHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC-YLMSDMP--QDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~--~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
..+..+...|..++..|+|++|+..|+++++++|+ ++.++.++|.+ +...|++ ++|+..++++++++|++..+++.
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 120 (177)
T 2e2e_A 42 QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALML 120 (177)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHH
Confidence 45678899999999999999999999999999999 89999999999 8899999 99999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
+|.++..+|++++|+..|+++++++|.+...
T Consensus 121 la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 151 (177)
T 2e2e_A 121 LASDAFMQANYAQAIELWQKVMDLNSPRINR 151 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCTTSCH
T ss_pred HHHHHHHcccHHHHHHHHHHHHhhCCCCccH
Confidence 9999999999999999999999999998643
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-14 Score=108.25 Aligned_cols=107 Identities=17% Similarity=0.167 Sum_probs=101.4
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
.+..+...|..++..|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|.+..+++.+|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 86 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 3567889999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhcccccccccc
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+..+|++++|+..|+++++++|++..++
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 114 (125)
T 1na0_A 87 YYKQGDYDEAIEYYQKALELDPNNAEAK 114 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999999999886543
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.4e-15 Score=142.68 Aligned_cols=109 Identities=24% Similarity=0.310 Sum_probs=104.1
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
.+.+..++.+|..++++|+|++|+..|++|++++|+ +..+|.++|.+|..+|++++|++++++|++++|+++.+|+++|
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 81 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 81 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 356778889999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
.+|..+|++++|+++|++|++++|++..++
T Consensus 82 ~~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 111 (477)
T 1wao_1 82 ASNMALGKFRAALRDYETVVKVKPHDKDAK 111 (477)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTCTTHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999988665
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.9e-14 Score=118.92 Aligned_cols=105 Identities=16% Similarity=0.113 Sum_probs=99.5
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch---------
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--------- 317 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~--------- 317 (357)
.+..+...|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+.++++++++.|.+.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 114 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 114 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcc
Confidence 4678899999999999999999999999999999 899999999999999999999999999999888776
Q ss_pred -------HHHHHHHHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 318 -------IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 318 -------~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
.+++++|.++..+|++++|+.+|+++++++|++..
T Consensus 115 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 115 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred ccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 99999999999999999999999999999997643
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.7e-15 Score=111.54 Aligned_cols=96 Identities=21% Similarity=0.287 Sum_probs=91.0
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc------hHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------HIAS 320 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~ 320 (357)
.+..+...|..++..|+|++|+..|+++++++|+ ++.+++++|.+|..+|++++|+.+++++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 5678999999999999999999999999999999 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHh
Q 018348 321 YLQAAALSAMGMENEAQVALKEG 343 (357)
Q Consensus 321 ~~~g~~~~~~g~~~~A~~~~~~a 343 (357)
+++|.++..+|++++|+..|++.
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHhHhhhHhHHHHh
Confidence 99999999999999988877653
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.55 E-value=2.2e-15 Score=120.16 Aligned_cols=88 Identities=7% Similarity=-0.246 Sum_probs=83.0
Q ss_pred HHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcc
Q 018348 267 AIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 346 (357)
Q Consensus 267 Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 346 (357)
+-..|+++++++|+ +..+++++|.++...|++++|+..|+++++++|+++.+|+++|.++..+|+|++|+.+|++|+++
T Consensus 21 ~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 21 SGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp TSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 44567889999999 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccC
Q 018348 347 EAKKNSTAG 355 (357)
Q Consensus 347 ~~~~~~a~~ 355 (357)
+|++..+|.
T Consensus 100 ~P~~~~~~~ 108 (151)
T 3gyz_A 100 GKNDYTPVF 108 (151)
T ss_dssp SSSCCHHHH
T ss_pred CCCCcHHHH
Confidence 999987763
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.2e-14 Score=142.12 Aligned_cols=107 Identities=12% Similarity=-0.078 Sum_probs=98.5
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
+.+..++.+|..++..|+|++|+..|++|++++|+ ++.+++++|.+|..+|++++ +++|++|++++|+++.+|+++|.
T Consensus 465 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~ 542 (681)
T 2pzi_A 465 WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLAR 542 (681)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHH
Confidence 56677889999999999999999999999999999 88999999999999999999 99999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++..+|++++|+++|++|++++|++..++
T Consensus 543 ~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 571 (681)
T 2pzi_A 543 ARSAEGDRVGAVRTLDEVPPTSRHFTTAR 571 (681)
T ss_dssp HHHHTTCHHHHHHHHHTSCTTSTTHHHHH
T ss_pred HHHHcCCHHHHHHHHHhhcccCcccHHHH
Confidence 99999999999999999999999887665
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.8e-13 Score=119.09 Aligned_cols=106 Identities=13% Similarity=-0.002 Sum_probs=102.0
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+..+...|..++..|++++|+..|+++++++|+ +..++.++|.+|...|++++|+..++++++++|.++.+|+.+|
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 456788999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhccccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
.++..+|++++|+..|+++++++|++.
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999999876
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-13 Score=120.32 Aligned_cols=108 Identities=13% Similarity=0.014 Sum_probs=100.5
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc---hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCC---chHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPI---WHIA 319 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~---~~~a 319 (357)
..+..++.+|..++..|+|++|+..|+++++.+|+ + ..+++++|.+|..+|++++|+..|+++++++|+ .+.+
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 45778999999999999999999999999999999 7 789999999999999999999999999999884 4678
Q ss_pred HHHHHHHHHH--------cCChHHHHHHHHHhhcccccccccc
Q 018348 320 SYLQAAALSA--------MGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 320 ~~~~g~~~~~--------~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++.+|.+++. +|++++|+..|+++++++|++..++
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 9999999999 9999999999999999999986543
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.50 E-value=2e-13 Score=114.52 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=95.5
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..++..|..++..|+|++|+..|++++ +| ++.+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 456678899999999999999999999996 44 47899999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
++..+|++++|+.+|++++++.|++.
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999998876
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.8e-13 Score=117.75 Aligned_cols=108 Identities=19% Similarity=0.189 Sum_probs=102.5
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+..+...|..++..|+|++|+..|+++++.+|. +..++.++|.+|..+|++++|+..++++++++|+++.+|+.+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 214 (258)
T 3uq3_A 136 PEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKA 214 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 456778899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhccc------cccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLE------AKKNST 353 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~------~~~~~a 353 (357)
.++..+|++++|+..|+++++++ |++...
T Consensus 215 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~ 249 (258)
T 3uq3_A 215 TAQIAVKEYASALETLDAARTKDAEVNNGSSAREI 249 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHH
Confidence 99999999999999999999999 776544
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.49 E-value=7e-14 Score=105.70 Aligned_cols=87 Identities=16% Similarity=0.137 Sum_probs=83.1
Q ss_pred HHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhh
Q 018348 265 KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGT 344 (357)
Q Consensus 265 ~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al 344 (357)
++|+..|+++++.+|+ ++.+++++|.+|...|++++|+..|+++++++|++..+|+++|.++..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4689999999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 018348 345 TLEAKKNS 352 (357)
Q Consensus 345 ~l~~~~~~ 352 (357)
+++|.+..
T Consensus 81 ~~~~~~~~ 88 (115)
T 2kat_A 81 AAAQSRGD 88 (115)
T ss_dssp HHHHHHTC
T ss_pred Hhcccccc
Confidence 99987653
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.8e-13 Score=116.54 Aligned_cols=108 Identities=9% Similarity=-0.033 Sum_probs=98.3
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc--hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchH---HHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS--PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI---ASY 321 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~---a~~ 321 (357)
.++.++.+|..++..|+|++|+..|+++++..|+.. ..+++++|.+|..+|++++|+..|+++++++|+++. +++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 457789999999999999999999999999999821 368999999999999999999999999999999875 899
Q ss_pred HHHHHHHH------------------cCChHHHHHHHHHhhcccccccccc
Q 018348 322 LQAAALSA------------------MGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 322 ~~g~~~~~------------------~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
.+|.++.. +|++++|+..|+++++.+|++..++
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 99999987 6799999999999999999988654
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-13 Score=124.99 Aligned_cols=108 Identities=14% Similarity=0.038 Sum_probs=102.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..++.+|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..|+++++++|++..+|+.+|.
T Consensus 63 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 141 (365)
T 4eqf_A 63 KDWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAV 141 (365)
T ss_dssp TTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45667899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|..+|++++|+..|+++++++|++..++
T Consensus 142 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 170 (365)
T 4eqf_A 142 SYTNTSHQQDACEALKNWIKQNPKYKYLV 170 (365)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCHHHHCC-
T ss_pred HHHccccHHHHHHHHHHHHHhCccchHHH
Confidence 99999999999999999999999987665
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.47 E-value=6e-14 Score=108.22 Aligned_cols=82 Identities=13% Similarity=-0.061 Sum_probs=76.0
Q ss_pred HHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 273 QFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 273 ~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
++..+||+ .+..+.++|.+|++.|++++|++.|++|++++|.++.+|+++|.+|..+|++++|+.+|++|++++|++..
T Consensus 4 r~a~inP~-~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 4 RLAYINPE-LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp ---CCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhH
Confidence 45678999 89999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccC
Q 018348 353 TAG 355 (357)
Q Consensus 353 a~~ 355 (357)
+|.
T Consensus 83 a~~ 85 (126)
T 4gco_A 83 GYI 85 (126)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.47 E-value=4.5e-13 Score=102.81 Aligned_cols=104 Identities=18% Similarity=0.188 Sum_probs=97.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.....+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++.+|.+..+++.+|.
T Consensus 33 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 111 (136)
T 2fo7_A 33 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGN 111 (136)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 45677888999999999999999999999999999 88899999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
++..+|++++|+..|+++++++|++
T Consensus 112 ~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 112 AYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999998863
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.46 E-value=9.9e-14 Score=131.58 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=102.5
Q ss_pred hHHHHHHHhHHHhc---------cCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhc--------CChHHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQ---------KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS--------DMPQDALNDAMQAQ 310 (357)
Q Consensus 248 ~~~~~~~g~~~~~~---------~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~--------~~~~~A~~~~~~al 310 (357)
...+...|..+... |+|++|+..|++|++++|+ +..+|+++|.+|..+ |++++|+..|++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 58899999999999 9999999999999999999 899999999999999 99999999999999
Q ss_pred HhCC---CchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 311 IISP---IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 311 ~l~p---~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+++| +++.+|+++|.+|..+|+|++|+.+|++|++++|++..++
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~ 295 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQ 295 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999 9999999999999999999999999999999999988665
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.8e-13 Score=100.32 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=87.9
Q ss_pred HHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchH-HHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 018348 251 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT-VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 329 (357)
Q Consensus 251 ~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 329 (357)
.+++|..++..|+|++|+..|+++++.+|+ +.. +++++|.+|..+|++++|+..|+++++++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 467899999999999999999999999999 888 99999999999999999999999999999999999865
Q ss_pred cCChHHHHHHHHHhhccccccccc
Q 018348 330 MGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 330 ~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
+.+.+|+..|+++++++|++..+
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~~~ 97 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHHHH 97 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCSSC
T ss_pred -HHHHHHHHHHHHHhccCcccccC
Confidence 77899999999999999988754
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=3.6e-13 Score=130.56 Aligned_cols=108 Identities=10% Similarity=-0.013 Sum_probs=84.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..+...|..++..|++++|+..|+++++++|+ +..+++++|.+|..+|++++|++.++++++++|++..+++++|.
T Consensus 55 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 133 (568)
T 2vsy_A 55 GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLN 133 (568)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45667777788888888888888888888888887 77777788888888888888888888888888888888888888
Q ss_pred HHHHc---CChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAM---GMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~---g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++..+ |++++|++.|+++++++|++..++
T Consensus 134 ~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 165 (568)
T 2vsy_A 134 WRRRLCDWRALDVLSAQVRAAVAQGVGAVEPF 165 (568)
T ss_dssp HHHHTTCCTTHHHHHHHHHHHHHHTCCCSCHH
T ss_pred HHHHhhccccHHHHHHHHHHHHhcCCcccChH
Confidence 88888 888888888888888877765543
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-12 Score=100.69 Aligned_cols=104 Identities=18% Similarity=0.182 Sum_probs=98.7
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 328 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 328 (357)
..+...|..++..|++++|+..|+++++.+|. +...+.++|.++...|++++|+..++++++.+|.+..+++.+|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 46788999999999999999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHhhccccccccc
Q 018348 329 AMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 329 ~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
.+|++++|+..|+++++++|.+..+
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~ 105 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEA 105 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHH
Confidence 9999999999999999999887544
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.8e-13 Score=120.60 Aligned_cols=107 Identities=17% Similarity=0.198 Sum_probs=101.8
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
+++.+...|..++..|+|++|+..|+++++.+|+ ++.++.++|.++..+|++++|+..++++++++|++..+|+.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 4678999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhcccc---cccccc
Q 018348 327 LSAMGMENEAQVALKEGTTLEA---KKNSTA 354 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~---~~~~a~ 354 (357)
+..+|++++|+..|+++++++| ++..++
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 111 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNPSEQEEKEAE 111 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCcccChHHHH
Confidence 9999999999999999999999 665443
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.44 E-value=8.8e-13 Score=125.19 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=101.6
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
+.+.++.++.+|..++..|+|++|+..|+++++.+|+ +.++.++|.+|..+|++++|+..++++++++|++..+|+.+
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 79 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRR 79 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHH
Confidence 4578899999999999999999999999999999996 78899999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 324 AAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
|.++..+|++++|+..|+++++++|.+..
T Consensus 80 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 80 ASANEGLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHHHHHHhhHHHHHHHHHHHHhcCCCccc
Confidence 99999999999999999999999986543
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-12 Score=106.64 Aligned_cols=108 Identities=14% Similarity=0.050 Sum_probs=102.4
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.....+...|..++..|++++|+..|+++++.+|. +..++..+|.++...|++++|+..++++++.+|.++.+++.+|.
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 152 (186)
T 3as5_A 74 DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAF 152 (186)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 45677889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++..+|++++|+..|+++++++|++..+.
T Consensus 153 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 181 (186)
T 3as5_A 153 SYEQMGRHEEALPHFKKANELDEGASVEL 181 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCchhhH
Confidence 99999999999999999999999887543
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.44 E-value=5.9e-13 Score=121.24 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=100.0
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
.+..+...|..+...|++++|+..|+++++++|+ ++.+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 5678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhccccccc
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
|..+|++++|+..|+++++++|+..
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~~ 315 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKSR 315 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC-
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccC
Confidence 9999999999999999999999853
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.44 E-value=8.5e-13 Score=112.60 Aligned_cols=103 Identities=14% Similarity=0.137 Sum_probs=57.4
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
+..+...|..++..|++++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|.+..+++.+|.++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 135 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVL 135 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 444555555555555555555555555555555 4555555555555555555555555555555555555555555555
Q ss_pred HHcCChHHHHHHHHHhhccccccc
Q 018348 328 SAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 328 ~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
..+|++++|+..|+++++++|++.
T Consensus 136 ~~~~~~~~A~~~~~~~~~~~~~~~ 159 (243)
T 2q7f_A 136 VKLEQPKLALPYLQRAVELNENDT 159 (243)
T ss_dssp HHTSCHHHHHHHHHHHHHHCTTCH
T ss_pred HHhccHHHHHHHHHHHHHhCCccH
Confidence 555555555555555555555443
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.9e-13 Score=129.62 Aligned_cols=108 Identities=9% Similarity=-0.049 Sum_probs=103.4
Q ss_pred HhhHHHHHHHhHHHhccCH-HHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDL-KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~-~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
..+..++.+|..++..|+| ++|+..|++|++++|+ +..+|+++|.+|..+|++++|+..|+++++++|+ ..+++++|
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg 177 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLS 177 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHH
Confidence 5678899999999999999 9999999999999999 8999999999999999999999999999999999 79999999
Q ss_pred HHHHHc---------CChHHHHHHHHHhhccccccccccC
Q 018348 325 AALSAM---------GMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 325 ~~~~~~---------g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
.++..+ |++++|+..|++|++++|++..+|.
T Consensus 178 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 217 (474)
T 4abn_A 178 MVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWY 217 (474)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999 9999999999999999999887653
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-13 Score=110.10 Aligned_cols=87 Identities=10% Similarity=-0.069 Sum_probs=82.2
Q ss_pred HHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcc
Q 018348 267 AIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 346 (357)
Q Consensus 267 Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 346 (357)
+-..|+++++++|+ +...++++|.++...|++++|+..|++++.++|.++.+|+++|.++..+|+|++|+.+|++++++
T Consensus 6 ~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 6 GGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34568899999999 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 018348 347 EAKKNSTA 354 (357)
Q Consensus 347 ~~~~~~a~ 354 (357)
+|++..++
T Consensus 85 ~p~~~~~~ 92 (148)
T 2vgx_A 85 DIXEPRFP 92 (148)
T ss_dssp STTCTHHH
T ss_pred CCCCchHH
Confidence 99988664
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-12 Score=111.19 Aligned_cols=107 Identities=12% Similarity=0.009 Sum_probs=81.5
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHH--hCCCchHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI--ISPIWHIASYLQ 323 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--l~p~~~~a~~~~ 323 (357)
..+..+...|..++..|++++|+..|+++++.+|. +..++.++|.+|...|++++|++.++++++ .+|.+..+++.+
T Consensus 69 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l 147 (252)
T 2ho1_A 69 SSADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENL 147 (252)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHH
Confidence 45566777777777788888888888888877777 677777777777777777777777777777 777777777777
Q ss_pred HHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 324 AAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
|.++..+|++++|+..|+++++++|.+..+
T Consensus 148 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 177 (252)
T 2ho1_A 148 GLVSLQMKKPAQAKEYFEKSLRLNRNQPSV 177 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCcccHHH
Confidence 777777777777777777777777765443
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.2e-12 Score=119.04 Aligned_cols=108 Identities=9% Similarity=0.058 Sum_probs=103.0
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
.+..++.+|..++..|+|++|+..|+++++.+|+ +..++.++|.+|...|++++|+..++++++++|+++.+++.+|.+
T Consensus 63 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 141 (368)
T 1fch_A 63 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVS 141 (368)
T ss_dssp TCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3566889999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhccccccccccC
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+..+|++++|+..|+++++++|++...+.
T Consensus 142 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 170 (368)
T 1fch_A 142 FTNESLQRQACEILRDWLRYTPAYAHLVT 170 (368)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTGGGCC
T ss_pred HHHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 99999999999999999999999887663
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.5e-12 Score=105.77 Aligned_cols=108 Identities=14% Similarity=0.082 Sum_probs=101.4
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.....+...|..++..|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++.+|.+..+++.+|.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 118 (186)
T 3as5_A 40 FDVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGV 118 (186)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHH
Confidence 34677889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++..+|++++|+..|+++++++|.+..++
T Consensus 119 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 147 (186)
T 3as5_A 119 ALDNLGRFDEAIDSFKIALGLRPNEGKVH 147 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHhcCccchHHH
Confidence 99999999999999999999998876443
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.42 E-value=6.3e-13 Score=108.50 Aligned_cols=108 Identities=12% Similarity=-0.040 Sum_probs=90.5
Q ss_pred hhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHH-HHhcCChHHHHHHHHHHHHhCCCchHHH
Q 018348 242 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC-YLMSDMPQDALNDAMQAQIISPIWHIAS 320 (357)
Q Consensus 242 ~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~~~A~~~~~~al~l~p~~~~a~ 320 (357)
....+.+..+...|..+...|++++|+..|+++++.+|+ +.++..++.+ +...++..+|+..++++++++|+++.++
T Consensus 34 ~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~--~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~ 111 (176)
T 2r5s_A 34 DELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQD--NSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELA 111 (176)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCC--HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHH
T ss_pred HHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCC--hHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHH
Confidence 344577888999999999999999999999999999982 4555544533 3333445568999999999999999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 321 YLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 321 ~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
+++|.++..+|++++|+..|+++++++|+..
T Consensus 112 ~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 142 (176)
T 2r5s_A 112 CELAVQYNQVGRDEEALELLWNILKVNLGAQ 142 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTTTT
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHhCcccC
Confidence 9999999999999999999999999999764
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=8.4e-13 Score=116.74 Aligned_cols=102 Identities=11% Similarity=-0.081 Sum_probs=68.7
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
+..+...|..+...|++++|+..|+++++.+|+ ......+.+..+...++.++|+..++++++++|+++.+++++|.+|
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l 229 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQD-TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQL 229 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCS-HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcc-hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 334444444444444444444444444444443 3333333344444444444456667777889999999999999999
Q ss_pred HHcCChHHHHHHHHHhhcccccc
Q 018348 328 SAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 328 ~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
..+|++++|+..|+++++++|++
T Consensus 230 ~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 230 HQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHcccHHHHHHHHHHHHhccccc
Confidence 99999999999999999999988
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.5e-14 Score=116.73 Aligned_cols=105 Identities=10% Similarity=0.035 Sum_probs=92.0
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH-H
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA-L 327 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~ 327 (357)
..+...+..+...|+|++|+..|+++++.+|+ ++.++..+|.+|...|++++|+..|+++++++|+++.+++.+|.+ +
T Consensus 11 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~ 89 (177)
T 2e2e_A 11 QRQRDPLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLY 89 (177)
T ss_dssp CCSSTTTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred HHHhhhhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 34445566678899999999999999999999 899999999999999999999999999999999999999999999 8
Q ss_pred HHcCCh--HHHHHHHHHhhcccccccccc
Q 018348 328 SAMGME--NEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 328 ~~~g~~--~~A~~~~~~al~l~~~~~~a~ 354 (357)
...|++ ++|+..|+++++++|++..++
T Consensus 90 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 118 (177)
T 2e2e_A 90 YQASQHMTAQTRAMIDKALALDSNEITAL 118 (177)
T ss_dssp HHTTTCCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhcCCcchHHHHHHHHHHHHhCCCcHHHH
Confidence 899999 999999999999999987654
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.41 E-value=8e-13 Score=126.38 Aligned_cols=110 Identities=21% Similarity=0.306 Sum_probs=96.3
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
+....++.++.+|..++..|+|++|+..|+++++.+|+ ++.++.++|.+|..+|++++|+..++++++++|+++.+++.
T Consensus 20 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 98 (537)
T 3fp2_A 20 QRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLR 98 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHH
Confidence 44567899999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|.++..+|++++|+..|+ ++.++|+...++
T Consensus 99 la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~~ 129 (537)
T 3fp2_A 99 RASANESLGNFTDAMFDLS-VLSLNGDFDGAS 129 (537)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHC---------
T ss_pred HHHHHHHcCCHHHHHHHHH-HHhcCCCCChHH
Confidence 9999999999999999996 899998876554
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.3e-12 Score=111.50 Aligned_cols=108 Identities=12% Similarity=0.061 Sum_probs=102.5
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.....+...|..++..|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++.+|++..+++.+|.
T Consensus 123 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 201 (243)
T 2q7f_A 123 ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGV 201 (243)
T ss_dssp CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 34567889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++..+|++++|+..|+++++++|++..++
T Consensus 202 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 202 TYAYKENREKALEMLDKAIDIQPDHMLAL 230 (243)
T ss_dssp HHHHTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHccCHHHHHHHHHHHHccCcchHHHH
Confidence 99999999999999999999999987654
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.4e-12 Score=122.02 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=102.6
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
.....+..+...|..++..|+|++|+..|+++++.+|+ +..+++++|.+|..+|++++|+..++++++++|++..+++.
T Consensus 21 ~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 99 (450)
T 2y4t_A 21 QSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQ 99 (450)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 34467888999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
+|.+|..+|++++|+..|+++++++|++.
T Consensus 100 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 100 RGHLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 99999999999999999999999999876
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-12 Score=119.04 Aligned_cols=103 Identities=13% Similarity=0.158 Sum_probs=100.2
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
.+..+...|..+...|++++|+..|+++++++|+ ++.++.++|.++...|++++|+..++++++++|+++.+++++|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 5778899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhcccccc
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
+..+|++++|+..|+++++++|++
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999987
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.4e-12 Score=112.01 Aligned_cols=106 Identities=15% Similarity=0.059 Sum_probs=93.1
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhh--------------------------cCCCcchHHHhhHHHHHHhcCChHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFID--------------------------AGTMVSPTVYARRSLCYLMSDMPQD 301 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~--------------------------~~p~~~~~~~~~~a~~~~~~~~~~~ 301 (357)
+..+...|..+...|++++|+..|+++++ .+|. ...++.++|.++...|++++
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHH
Confidence 45666677777777777777777777766 7777 78899999999999999999
Q ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 302 ALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 302 A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
|+..++++++++|.++.+|+.+|.++..+|++++|+..|+++++++|++..++
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 210 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAY 210 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887654
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=7.9e-14 Score=122.98 Aligned_cols=72 Identities=14% Similarity=0.091 Sum_probs=60.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 80 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~g 80 (357)
++||+|.+ +.. .....++.|++.||.|||+.+ ++||||||.||+++ ++.+||+|||+++.
T Consensus 182 ~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl~-~~~vkl~DFG~a~~--------- 241 (282)
T 1zar_A 182 IDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVS-EEGIWIIDFPQSVE--------- 241 (282)
T ss_dssp CCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEE-TTEEEECCCTTCEE---------
T ss_pred cCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEEE-CCcEEEEECCCCeE---------
Confidence 57889988 521 224579999999999999999 99999999999999 99999999999864
Q ss_pred CCCCCchhhhcC
Q 018348 81 NLAFTPPEYLRT 92 (357)
Q Consensus 81 t~~y~aPE~~~~ 92 (357)
+..+++||++..
T Consensus 242 ~~~~~a~e~l~r 253 (282)
T 1zar_A 242 VGEEGWREILER 253 (282)
T ss_dssp TTSTTHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 345789998853
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-12 Score=119.73 Aligned_cols=108 Identities=13% Similarity=0.052 Sum_probs=89.4
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.....+...|..+.+.|++++|+..|+++++++|+ +..++.++|.++...|++++|+..++++++++|++..+++++|.
T Consensus 269 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 347 (388)
T 1w3b_A 269 HFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLAS 347 (388)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 34566778888888888888888888888888888 77888888888888888888888888888888888888888888
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++..+|++++|+..|+++++++|++..++
T Consensus 348 ~~~~~g~~~~A~~~~~~a~~~~p~~~~a~ 376 (388)
T 1w3b_A 348 VLQQQGKLQEALMHYKEAIRISPTFADAY 376 (388)
T ss_dssp HHHTTTCCHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Confidence 88888888888888888888888776554
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-12 Score=114.15 Aligned_cols=104 Identities=5% Similarity=-0.109 Sum_probs=58.7
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCC---cchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+...|..++..|+|++|+..|+++++ .|. ....+|.++|.+|..+|++++|+..++++++++|.++.+|+.+|
T Consensus 37 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 115 (272)
T 3u4t_A 37 PYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIG 115 (272)
T ss_dssp STTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 34455555566666666666666666655 222 01223555566666666666666666666666666666666666
Q ss_pred HHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
.++..+|++++|+.+|+++++++|.+..
T Consensus 116 ~~~~~~~~~~~A~~~~~~al~~~~~~~~ 143 (272)
T 3u4t_A 116 SYFYNKGNFPLAIQYMEKQIRPTTTDPK 143 (272)
T ss_dssp HHHHHTTCHHHHHHHHGGGCCSSCCCHH
T ss_pred HHHHHccCHHHHHHHHHHHhhcCCCcHH
Confidence 6666666666666666666665555543
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-12 Score=120.43 Aligned_cols=108 Identities=12% Similarity=-0.004 Sum_probs=88.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
+.+..+...|..+...|++++|+..|+++++.+|+ ...++.++|.++..+|++++|++.|+++++.+|+++.+|+++|.
T Consensus 99 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 177 (388)
T 1w3b_A 99 DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPD-LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGC 177 (388)
T ss_dssp TCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT-CTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45566778888888888888888888888888888 77788888888888888888888888888888888888888888
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++..+|++++|+..|+++++++|++..++
T Consensus 178 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 206 (388)
T 1w3b_A 178 VFNAQGEIWLAIHHFEKAVTLDPNFLDAY 206 (388)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 88888888888888888888888776554
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.39 E-value=3.9e-12 Score=91.17 Aligned_cols=85 Identities=16% Similarity=0.161 Sum_probs=80.0
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..+...|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|++..+++++|.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 35677889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcC
Q 018348 326 ALSAMG 331 (357)
Q Consensus 326 ~~~~~g 331 (357)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998765
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.3e-12 Score=113.68 Aligned_cols=105 Identities=11% Similarity=-0.002 Sum_probs=74.9
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
+..+...|..+...|++++|+..|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|.++.+|+++|...
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 152 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAY 152 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 444667777777777777777777777777777 6677777777777777777777777777777777777777777444
Q ss_pred HHcCChHHHHHHHHHhhccccccccc
Q 018348 328 SAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 328 ~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
+..+++++|+..|+++++++|++..+
T Consensus 153 ~~~~~~~~A~~~~~~a~~~~p~~~~~ 178 (272)
T 3u4t_A 153 YYNKEYVKADSSFVKVLELKPNIYIG 178 (272)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccchHH
Confidence 44457777777777777777766443
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.39 E-value=7.7e-13 Score=97.49 Aligned_cols=75 Identities=12% Similarity=0.049 Sum_probs=63.9
Q ss_pred cCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 277 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 277 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
.+|+ ++.+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|++++++.|++..
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT 76 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc
Confidence 4677 78888899999999999999999999999999999999999999999999999999999999988876654
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.8e-12 Score=112.61 Aligned_cols=104 Identities=14% Similarity=0.114 Sum_probs=96.7
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc--chHHHhhHHHHHHh--------cCChHHHHHHHHHHHHhCCCch
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLM--------SDMPQDALNDAMQAQIISPIWH 317 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~--~~~~~~~~a~~~~~--------~~~~~~A~~~~~~al~l~p~~~ 317 (357)
...++..|..++..|+|++|+..|++++++.|++ .+.+++++|.++.. +|++++|+..|+++++.+|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 7889999999999999999999999999998862 35789999999999 9999999999999999999987
Q ss_pred HHH-----------------HHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 318 IAS-----------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 318 ~a~-----------------~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
.++ +.+|.+|..+|+|++|+..|+++++..|++.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 776 8999999999999999999999999999864
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.8e-12 Score=114.87 Aligned_cols=108 Identities=12% Similarity=0.007 Sum_probs=91.5
Q ss_pred HhhHHHHHHHhHHHhc-cCHHHHHHHHHHHhhcCCCcc-----hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchH-
Q 018348 246 QETLNSKKKGDVAFRQ-KDLKDAIECYTQFIDAGTMVS-----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI- 318 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~-~~~~~Ai~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~- 318 (357)
..+..+.+.|..+... |++++|+..|++|+++.|... ..++.++|.+|..+|++++|+..|+++++++|++..
T Consensus 115 ~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 194 (292)
T 1qqe_A 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS 194 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc
Confidence 3467889999999996 999999999999999987621 467899999999999999999999999999987653
Q ss_pred ------HHHHHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 319 ------ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 319 ------a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
+|+++|.++..+|++++|+.+|+++++++|+...+
T Consensus 195 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 195 QWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 68999999999999999999999999999987654
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.38 E-value=4e-12 Score=114.52 Aligned_cols=107 Identities=14% Similarity=0.107 Sum_probs=98.2
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcch----HHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
........|..++..|++++|+..|+++++.+|+ +. .++.++|.++...|++++|+..++++++++|+++.+|+.
T Consensus 233 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 311 (359)
T 3ieg_A 233 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKD 311 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 3444567799999999999999999999999999 65 346679999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|.++..+|++++|+.+|+++++++|++..++
T Consensus 312 ~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~ 343 (359)
T 3ieg_A 312 RAEAYLIEEMYDEAIQDYEAAQEHNENDQQIR 343 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCChHHH
Confidence 99999999999999999999999999987664
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.4e-12 Score=107.24 Aligned_cols=108 Identities=14% Similarity=0.051 Sum_probs=96.4
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhc-CChHHHHHHHHHHHH--hCCCchHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-DMPQDALNDAMQAQI--ISPIWHIASYL 322 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~--l~p~~~~a~~~ 322 (357)
.....+...|..+...|++++|+..|+++++.+|+ +..++.++|.++... |++++|+..++++++ .+|....+++.
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 118 (225)
T 2vq2_A 40 KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLN 118 (225)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHH
Confidence 45778888999999999999999999999999999 888999999999999 999999999999999 67777889999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|.++..+|++++|+..|+++++++|.+..++
T Consensus 119 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 150 (225)
T 2vq2_A 119 KGICSAKQGQFGLAEAYLKRSLAAQPQFPPAF 150 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCchHH
Confidence 99999999999999999999999988876543
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.8e-12 Score=115.64 Aligned_cols=109 Identities=15% Similarity=0.062 Sum_probs=101.8
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcC---------CCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCC
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG---------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI 315 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~---------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~ 315 (357)
......+...|..++..|++++|+..|+++++.. |. ...++.++|.+|..+|++++|+..++++++++|+
T Consensus 190 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 268 (330)
T 3hym_B 190 PEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ 268 (330)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred CCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc
Confidence 3557788999999999999999999999999986 55 6789999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 316 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 316 ~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++.+|+.+|.++..+|++++|+.+|+++++++|++..++
T Consensus 269 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 307 (330)
T 3hym_B 269 NASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSV 307 (330)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHH
Confidence 999999999999999999999999999999999987654
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.37 E-value=3.2e-12 Score=109.88 Aligned_cols=106 Identities=12% Similarity=-0.019 Sum_probs=99.7
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..+...|..++..|++++|+..|+++++.+|. +..++..+|.+|...|++++|++.++++++++|.+..+++.+|.
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 113 (252)
T 2ho1_A 35 EARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPS-SADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGG 113 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHH
Confidence 34778899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhc--ccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTT--LEAKKNS 352 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~--l~~~~~~ 352 (357)
++..+|++++|+..|+++++ .+|.+..
T Consensus 114 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 142 (252)
T 2ho1_A 114 FLYEQKRYEEAYQRLLEASQDTLYPERSR 142 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHTTCTTCTTHHH
T ss_pred HHHHHhHHHHHHHHHHHHHhCccCcccHH
Confidence 99999999999999999999 6665543
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.36 E-value=4.9e-12 Score=112.62 Aligned_cols=108 Identities=12% Similarity=0.052 Sum_probs=102.5
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..++.+|..++..|+|++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|.+..+++.+|.
T Consensus 19 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 97 (327)
T 3cv0_A 19 MYHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAV 97 (327)
T ss_dssp GGSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHH
Confidence 45677899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++..+|++++|+..|+++++++|++...+
T Consensus 98 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 126 (327)
T 3cv0_A 98 SHTNEHNANAALASLRAWLLSQPQYEQLG 126 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTSTTTTTC-
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCccHHHH
Confidence 99999999999999999999999987665
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=4.4e-12 Score=122.91 Aligned_cols=108 Identities=15% Similarity=0.026 Sum_probs=103.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..+...|..++..|+|++|+..|+++++++|+ +..++.++|.+|..+|++++|++.++++++++|++..+|+++|.
T Consensus 21 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~ 99 (568)
T 2vsy_A 21 QDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGH 99 (568)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|..+|++++|++.|+++++++|++..++
T Consensus 100 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 128 (568)
T 2vsy_A 100 ALEDAGQAEAAAAAYTRAHQLLPEEPYIT 128 (568)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999887554
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.9e-11 Score=108.44 Aligned_cols=114 Identities=10% Similarity=0.015 Sum_probs=106.9
Q ss_pred hhhhhHhhHHHHHHHhHHHhcc--CHHHHHHHHHHHhhcCCCcchHHHhhHHHHH----Hhc---CChHHHHHHHHHHHH
Q 018348 241 WTDQMQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCY----LMS---DMPQDALNDAMQAQI 311 (357)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~--~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~----~~~---~~~~~A~~~~~~al~ 311 (357)
..-..+....|+.+|..+...| ++++|+..++++|..+|+ +..+|+.|+.++ ..+ ++++++++.++++++
T Consensus 60 L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~ 138 (306)
T 3dra_A 60 INELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLS 138 (306)
T ss_dssp HHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHH
T ss_pred HHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHH
Confidence 3444577888999999999999 999999999999999999 999999999999 777 789999999999999
Q ss_pred hCCCchHHHHHHHHHHHHcCChH--HHHHHHHHhhccccccccccC
Q 018348 312 ISPIWHIASYLQAAALSAMGMEN--EAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 312 l~p~~~~a~~~~g~~~~~~g~~~--~A~~~~~~al~l~~~~~~a~~ 355 (357)
.+|++..+|+.++.++..+|+++ ++++.+++++++||.|..||.
T Consensus 139 ~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 139 SDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999999999999 999999999999999999985
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=3.6e-12 Score=112.93 Aligned_cols=107 Identities=8% Similarity=-0.187 Sum_probs=96.7
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc-----chHHHhhHHHHHHhc-CChHHHHHHHHHHHHhCCCc---
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMS-DMPQDALNDAMQAQIISPIW--- 316 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~l~p~~--- 316 (357)
..+..+.+.|..+...|+|++|+..|++|+++.+.. ...++.++|.+|... |++++|+.+|++|+++.|..
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 457889999999999999999999999999987752 146899999999996 99999999999999998865
Q ss_pred ---hHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 317 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 317 ---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
..++.++|.++..+|+|++|+.+|++++++.|++..
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 567999999999999999999999999999998764
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.9e-12 Score=112.05 Aligned_cols=94 Identities=12% Similarity=0.004 Sum_probs=87.5
Q ss_pred HHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHH-H
Q 018348 258 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENE-A 336 (357)
Q Consensus 258 ~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~-A 336 (357)
+...|++++|+..|+++++.+|+ ++.+++++|.++..+|++++|+..++++++++|+++.+++++|.++..+|++++ |
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 34568999999999999999999 899999999999999999999999999999999999999999999999999986 5
Q ss_pred HHHHHHhhcccccccc
Q 018348 337 QVALKEGTTLEAKKNS 352 (357)
Q Consensus 337 ~~~~~~al~l~~~~~~ 352 (357)
.++++++++++|++..
T Consensus 255 ~~~~~~~~~~~P~~~~ 270 (291)
T 3mkr_A 255 NRYLSQLKDAHRSHPF 270 (291)
T ss_dssp HHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHhCCCChH
Confidence 6899999999999864
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.34 E-value=5.1e-12 Score=114.35 Aligned_cols=98 Identities=11% Similarity=-0.003 Sum_probs=92.3
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
+..+.+.|..+++.|+|++|+..|++||+++|+ +..+++++|.+|..+|++++|+.+|++|++++|++..+++++|.++
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 274 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 274 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 678999999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHH-HHHHHHhhcc
Q 018348 328 SAMGMENEA-QVALKEGTTL 346 (357)
Q Consensus 328 ~~~g~~~~A-~~~~~~al~l 346 (357)
..+|++++| ...|++.+..
T Consensus 275 ~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 275 QRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 999999999 5567776543
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.34 E-value=5.6e-12 Score=112.23 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=99.6
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.....+...|..+...|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|++..+|+.+|.
T Consensus 170 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 248 (327)
T 3cv0_A 170 NDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAV 248 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 35678899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~ 349 (357)
++..+|++++|+..|+++++++|+
T Consensus 249 ~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 249 SYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHhccHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999998
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=103.20 Aligned_cols=85 Identities=7% Similarity=-0.067 Sum_probs=78.2
Q ss_pred HHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccc
Q 018348 269 ECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 269 ~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
..|.++++++|+ +...++++|.++...|++++|+..|++++.++|+++.+|+.+|.++..+|+|++|+.+|+++++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 467889999999 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 018348 349 KKNSTA 354 (357)
Q Consensus 349 ~~~~a~ 354 (357)
++..++
T Consensus 84 ~~~~~~ 89 (142)
T 2xcb_A 84 NEPRFP 89 (142)
T ss_dssp TCTHHH
T ss_pred CCcHHH
Confidence 988654
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.34 E-value=6.9e-12 Score=105.34 Aligned_cols=100 Identities=9% Similarity=-0.015 Sum_probs=55.6
Q ss_pred hHHHHHHHhHHHhc-cCHHHHHHHHHHHhh--cCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQ-KDLKDAIECYTQFID--AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 248 ~~~~~~~g~~~~~~-~~~~~Ai~~~~~ai~--~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+...|..++.. |++++|+..|+++++ .+|. ...++.++|.++...|++++|+..++++++.+|.+..+++.+|
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 154 (225)
T 2vq2_A 76 AEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELA 154 (225)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHH
Confidence 33445555555555 555555555555555 3343 3455555555555555555555555555555555555555555
Q ss_pred HHHHHcCChHHHHHHHHHhhcccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
.++..+|++++|+..|+++++++|
T Consensus 155 ~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 155 RTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCC
Confidence 555555555555555555555555
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=7.6e-12 Score=111.52 Aligned_cols=105 Identities=11% Similarity=-0.105 Sum_probs=81.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.....+...|..+...|++++|+..|+++++..|+ +...+.++|.+|...|++++|+..++++++++|+++.+++.+|.
T Consensus 123 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~ 201 (330)
T 3hym_B 123 TYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGV 201 (330)
T ss_dssp TCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 45666777788888888888888888888888877 66777777888888888888888888888888888888888888
Q ss_pred HHHHcCChHHHHHHHHHhhccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
++..+|++++|+..|++++++.+...
T Consensus 202 ~~~~~~~~~~A~~~~~~a~~~~~~~~ 227 (330)
T 3hym_B 202 VAFQNGEWKTAEKWFLDALEKIKAIG 227 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHcccHHHHHHHHHHHHHHhhhcc
Confidence 88888888888888888877766544
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.33 E-value=9.7e-12 Score=116.19 Aligned_cols=105 Identities=14% Similarity=0.109 Sum_probs=97.5
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcch----HHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
..+...|..++..|++++|+..|+++++++|+ ++ .++.++|.++...|++++|+..++++++++|+++.+|+.+|
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~ 336 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRA 336 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 34456699999999999999999999999999 64 47899999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
.++..+|++++|+.+|+++++++|++..++
T Consensus 337 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 366 (450)
T 2y4t_A 337 EAYLIEEMYDEAIQDYETAQEHNENDQQIR 366 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTSSSCHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcchHHHH
Confidence 999999999999999999999999987654
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-11 Score=119.35 Aligned_cols=113 Identities=7% Similarity=-0.129 Sum_probs=106.9
Q ss_pred hhhhHhhHHHHHHHhHHHhccC----------HHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcC--ChHHHHHHHHHH
Q 018348 242 TDQMQETLNSKKKGDVAFRQKD----------LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD--MPQDALNDAMQA 309 (357)
Q Consensus 242 ~~~~~~~~~~~~~g~~~~~~~~----------~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~a 309 (357)
....+...+|+.+|..+...|+ +++|+..++++++.+|+ ++.+|.+|+.++..++ ++++|++.++++
T Consensus 57 ~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~k~ 135 (567)
T 1dce_A 57 GANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARF 135 (567)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHH
T ss_pred HHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHHHH
Confidence 3444778889999999999998 99999999999999999 9999999999999999 669999999999
Q ss_pred HHhCCCchHHHHHHHHHHHHcC-ChHHHHHHHHHhhccccccccccC
Q 018348 310 QIISPIWHIASYLQAAALSAMG-MENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 310 l~l~p~~~~a~~~~g~~~~~~g-~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+++||.+..||+.+|.++..+| .+++|+++++++++++|.+..||.
T Consensus 136 l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~ 182 (567)
T 1dce_A 136 LEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 182 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHH
T ss_pred HhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHH
Confidence 9999999999999999999999 999999999999999999999985
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.32 E-value=8.8e-12 Score=105.94 Aligned_cols=103 Identities=15% Similarity=0.057 Sum_probs=93.9
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchH---HHhhHHHHHHh------------------cCChHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLM------------------SDMPQDALNDA 306 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~---~~~~~a~~~~~------------------~~~~~~A~~~~ 306 (357)
...++..|..++..|+|++|+..|+++++.+|+ ++. +++++|.++.. .|++++|+..|
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 568899999999999999999999999999999 543 78889999886 57899999999
Q ss_pred HHHHHhCCCchHHH-----------------HHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 307 MQAQIISPIWHIAS-----------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 307 ~~al~l~p~~~~a~-----------------~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
+++++.+|++..++ +.+|.+|+..|+|++|+..|+++++..|++.
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 99999999998665 6789999999999999999999999999875
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.32 E-value=8.1e-12 Score=110.64 Aligned_cols=109 Identities=14% Similarity=-0.058 Sum_probs=94.8
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHH--HHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRS--LCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
....+.+...|..+.+.|++++|+..|+++++.+|+ ........+ ..+...|++++|+..|+++++.+|+++.+|++
T Consensus 127 ~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~ 205 (291)
T 3mkr_A 127 GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNG 205 (291)
T ss_dssp CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 356778899999999999999999999999999998 543322222 22334589999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 323 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 323 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|.++..+|++++|+..|+++++++|++..++
T Consensus 206 la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l 237 (291)
T 3mkr_A 206 QAACHMAQGRWEAAEGVLQEALDKDSGHPETL 237 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999998765
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.1e-12 Score=122.43 Aligned_cols=108 Identities=15% Similarity=0.048 Sum_probs=97.2
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..+...|..+++.|+|++|+..|++|++++|+ ++.+++++|.+|..+|++++|++.+++|++++|++..++..+|.
T Consensus 38 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~ 116 (477)
T 1wao_1 38 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 116 (477)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred H--HHHcCChHHHHHHHH-----------Hhhcccccccccc
Q 018348 326 A--LSAMGMENEAQVALK-----------EGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~--~~~~g~~~~A~~~~~-----------~al~l~~~~~~a~ 354 (357)
+ +..+|++++|++.++ ++++++|+...++
T Consensus 117 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 158 (477)
T 1wao_1 117 CNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPK 158 (477)
T ss_dssp HHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCC
T ss_pred HHHHHHHHHHHHHhccccccchhHhhhhhhhccccccccccc
Confidence 8 999999999999999 9999998876654
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.32 E-value=4.1e-12 Score=97.93 Aligned_cols=72 Identities=8% Similarity=-0.133 Sum_probs=68.3
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 282 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 282 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
.+.++.++|.++.+.|++++|+.+|++|++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++...
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 467889999999999999999999999999999999999999999999999999999999999999987654
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.3e-11 Score=98.66 Aligned_cols=102 Identities=13% Similarity=0.010 Sum_probs=93.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH--
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ-- 323 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~-- 323 (357)
.....+...|..++..|+|++|+..|+++++++|+ ++.+++++|.++..+|++++|+..++++++++|.+..++..+
T Consensus 45 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~ 123 (166)
T 1a17_A 45 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 123 (166)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45778899999999999999999999999999999 899999999999999999999999999999999999998555
Q ss_pred HHHHHHcCChHHHHHHHHHhhcccc
Q 018348 324 AAALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
+..+..+|++++|+..++++.++-+
T Consensus 124 ~~~~~~~~~~~~A~~~~~~~~~~~~ 148 (166)
T 1a17_A 124 CNKIVKQKAFERAIAGDEHKRSVVD 148 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccchHHHhc
Confidence 5558899999999999999876643
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.9e-11 Score=106.10 Aligned_cols=105 Identities=10% Similarity=0.017 Sum_probs=78.6
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch---------
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--------- 317 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~--------- 317 (357)
.+..+...|..++..|+|++|+..|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|++.
T Consensus 76 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 76 MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3456666777777777777777777777777777 667777777777777777777777777777766653
Q ss_pred -------------------------------------------------------------HHHHHHHHHHHHcCChHHH
Q 018348 318 -------------------------------------------------------------IASYLQAAALSAMGMENEA 336 (357)
Q Consensus 318 -------------------------------------------------------------~a~~~~g~~~~~~g~~~~A 336 (357)
.+|+.+|.++..+|++++|
T Consensus 155 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 234 (275)
T 1xnf_A 155 EQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSA 234 (275)
T ss_dssp HHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHH
Confidence 6678888888888888888
Q ss_pred HHHHHHhhcccccccc
Q 018348 337 QVALKEGTTLEAKKNS 352 (357)
Q Consensus 337 ~~~~~~al~l~~~~~~ 352 (357)
+..|+++++++|++..
T Consensus 235 ~~~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 235 TALFKLAVANNVHNFV 250 (275)
T ss_dssp HHHHHHHHTTCCTTCH
T ss_pred HHHHHHHHhCCchhHH
Confidence 8888888888887643
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=5.9e-11 Score=90.98 Aligned_cols=86 Identities=9% Similarity=-0.031 Sum_probs=82.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.....+...|..++..|++++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|.+..+++.+|.
T Consensus 48 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 126 (133)
T 2lni_A 48 KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 126 (133)
T ss_dssp TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 56788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCC
Q 018348 326 ALSAMGM 332 (357)
Q Consensus 326 ~~~~~g~ 332 (357)
++..+|+
T Consensus 127 ~~~~~~~ 133 (133)
T 2lni_A 127 CMMAQYN 133 (133)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 9998875
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=119.70 Aligned_cols=113 Identities=8% Similarity=-0.026 Sum_probs=106.1
Q ss_pred hhhhHhhHHHHHHHhHHHhcc--CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcC-ChHHHHHHHHHHHHhCCCchH
Q 018348 242 TDQMQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWHI 318 (357)
Q Consensus 242 ~~~~~~~~~~~~~g~~~~~~~--~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~l~p~~~~ 318 (357)
....+...+|..+|..+...| +|++|++.++++++++|. +..+|.+|+.+...+| .+++|+++++++|+++|.+..
T Consensus 101 ~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~s 179 (567)
T 1dce_A 101 RVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 179 (567)
T ss_dssp HHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHH
T ss_pred HhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCcc
Confidence 344578889999999999999 779999999999999999 9999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHc--------------CChHHHHHHHHHhhccccccccccC
Q 018348 319 ASYLQAAALSAM--------------GMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 319 a~~~~g~~~~~~--------------g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
||+++|.++..+ +++++|++++.+|++++|++..+|.
T Consensus 180 aW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~ 230 (567)
T 1dce_A 180 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 230 (567)
T ss_dssp HHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHH
T ss_pred HHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHH
Confidence 999999999986 6689999999999999999999984
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.8e-11 Score=115.19 Aligned_cols=103 Identities=14% Similarity=-0.028 Sum_probs=50.8
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCC--------CcchHHHhhHHHHHHhcC--ChHHHHHHHHHHHHhCCCch
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT--------MVSPTVYARRSLCYLMSD--MPQDALNDAMQAQIISPIWH 317 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p--------~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~l~p~~~ 317 (357)
+..+.+.|.+++..|+|++|+..|++++++.+ . .+.++.++|.++...| ++++|+.+|++|++++|+++
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~ 172 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE-SPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNP 172 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh-hHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCH
Confidence 33444555555555555555555555554321 1 2344455554444432 35555555555555555555
Q ss_pred HHHHHHHHHHHH---cCChHHHHHHHHHhhccccccc
Q 018348 318 IASYLQAAALSA---MGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 318 ~a~~~~g~~~~~---~g~~~~A~~~~~~al~l~~~~~ 351 (357)
.+++.+|.+++. .+++++|++.|++|++++|++.
T Consensus 173 ~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~ 209 (472)
T 4g1t_A 173 EFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQ 209 (472)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCH
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcch
Confidence 555555554332 3444555555555555555544
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.26 E-value=2.9e-11 Score=115.45 Aligned_cols=109 Identities=13% Similarity=0.045 Sum_probs=93.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..+...|..++..|+|++|+..|+++++++|+ +..++.++|.+|...|++++|+..++++++++|+++.+++.+|.
T Consensus 308 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 386 (537)
T 3fp2_A 308 EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAE 386 (537)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 45667888888888888888888888888888888 78888888888888888888888888888888888888888888
Q ss_pred HHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
++..+|++++|+..|+++++++|++...+.
T Consensus 387 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 416 (537)
T 3fp2_A 387 ILTDRGDFDTAIKQYDIAKRLEEVQEKIHV 416 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHCSSCSS
T ss_pred HHHHhCCHHHHHHHHHHHHHcCCcchhhHH
Confidence 888888888888888888888888776543
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.6e-11 Score=116.55 Aligned_cols=109 Identities=17% Similarity=0.123 Sum_probs=94.6
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc------CCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 319 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a 319 (357)
.....+...|..+.+.|++++|+..|+++++. +|+....+|.++|.+|...|++++|++.++++++++|+++.+
T Consensus 473 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 552 (597)
T 2xpi_A 473 YDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANV 552 (597)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHH
T ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHH
Confidence 34667888899999999999999999999888 565226788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 320 SYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 320 ~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
|+.+|.+|..+|++++|++.|+++++++|++..++
T Consensus 553 ~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 587 (597)
T 2xpi_A 553 HTAIALVYLHKKIPGLAITHLHESLAISPNEIMAS 587 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHH
Confidence 99999999999999999999999999999887654
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.24 E-value=8e-12 Score=113.14 Aligned_cols=104 Identities=13% Similarity=-0.001 Sum_probs=60.2
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH-H
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA-L 327 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~ 327 (357)
..+.+.|..+++.|+|++|+..|+++|+++|+ +..+|+++|.+|..+|++++|+.+|+++++++|++..++..++.+ .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 37889999999999999999999999999999 899999999999999999999999999999999999999999988 5
Q ss_pred HHcCChHHHHHHHHHhhccccccccc
Q 018348 328 SAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 328 ~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
...+.++++...|++++.++|++...
T Consensus 310 ~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 310 QEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 56678899999999999999988754
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.1e-10 Score=104.84 Aligned_cols=115 Identities=12% Similarity=-0.012 Sum_probs=107.2
Q ss_pred hhhhhhHhhHHHHHHHhHHHhcc-CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhc-C-ChHHHHHHHHHHHHhCCCc
Q 018348 240 MWTDQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-D-MPQDALNDAMQAQIISPIW 316 (357)
Q Consensus 240 ~~~~~~~~~~~~~~~g~~~~~~~-~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~-~-~~~~A~~~~~~al~l~p~~ 316 (357)
......+....|+.++..+...| .+++++..++++|..+|+ +..+|+.|+.++..+ + +++++++.++++++++|++
T Consensus 80 ~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkN 158 (349)
T 3q7a_A 80 IVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKN 158 (349)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTC
T ss_pred HHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCC
Confidence 34444577888999999999999 599999999999999999 999999999999998 8 9999999999999999999
Q ss_pred hHHHHHHHHHHHHcCChH--------HHHHHHHHhhccccccccccC
Q 018348 317 HIASYLQAAALSAMGMEN--------EAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 317 ~~a~~~~g~~~~~~g~~~--------~A~~~~~~al~l~~~~~~a~~ 355 (357)
..||+.++.++..+|+++ +++++++++++++|.|..||.
T Consensus 159 y~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~ 205 (349)
T 3q7a_A 159 YHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWG 205 (349)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999998 999999999999999999985
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.22 E-value=5e-11 Score=106.29 Aligned_cols=108 Identities=11% Similarity=-0.036 Sum_probs=75.2
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchH-HHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT-VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
+....|...|..+...|++++|+..|+++++++|. ++. +|.++|.++...|++++|+..|++|++++|....+|...+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a 175 (308)
T 2ond_A 97 KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAA 175 (308)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 44556677777777777777777777777777776 554 6777777777777777777777777777777766666555
Q ss_pred HHHHH-cCChHHHHHHHHHhhcccccccccc
Q 018348 325 AALSA-MGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 325 ~~~~~-~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
...+. +|++++|+..|++|++++|++...|
T Consensus 176 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 206 (308)
T 2ond_A 176 LMEYYCSKDKSVAFKIFELGLKKYGDIPEYV 206 (308)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 54332 5777777777777777777766554
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.1e-11 Score=106.34 Aligned_cols=110 Identities=10% Similarity=-0.084 Sum_probs=101.0
Q ss_pred hHhhHHHHHHHhHH----Hhc---cCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChH--HHHHHHHHHHHhCCC
Q 018348 245 MQETLNSKKKGDVA----FRQ---KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ--DALNDAMQAQIISPI 315 (357)
Q Consensus 245 ~~~~~~~~~~g~~~----~~~---~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~--~A~~~~~~al~l~p~ 315 (357)
.+....|..++..+ ... +++++++..++++++.+|. +..+|.+|+.+...+|+++ ++++.++++++.+|.
T Consensus 100 Pk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~ 178 (306)
T 3dra_A 100 EKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLK 178 (306)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTT
T ss_pred cccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCC
Confidence 35566677777777 555 7999999999999999999 9999999999999999999 999999999999999
Q ss_pred chHHHHHHHHHHHHcCC------hHHHHHHHHHhhccccccccccC
Q 018348 316 WHIASYLQAAALSAMGM------ENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 316 ~~~a~~~~g~~~~~~g~------~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+..||..++.++..+|+ +++++++++++++++|+|.++|.
T Consensus 179 N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~ 224 (306)
T 3dra_A 179 NNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWN 224 (306)
T ss_dssp CHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred CHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHH
Confidence 99999999999999998 99999999999999999999984
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=4.3e-11 Score=106.91 Aligned_cols=113 Identities=8% Similarity=-0.020 Sum_probs=105.3
Q ss_pred hhhhHhhHHHHHHHhHHHhcc--CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCC-hHHHHHHHHHHHHhCCCchH
Q 018348 242 TDQMQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHI 318 (357)
Q Consensus 242 ~~~~~~~~~~~~~g~~~~~~~--~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~l~p~~~~ 318 (357)
....+....|..++..+...| +|++++.+++++++.+|. +..+|.+++.+....|. +++++++++++|+.+|.+..
T Consensus 102 ~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~S 180 (331)
T 3dss_A 102 RVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 180 (331)
T ss_dssp HHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHH
T ss_pred HhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHH
Confidence 344578889999999999998 499999999999999999 99999999999999999 59999999999999999999
Q ss_pred HHHHHHHHHHHc--------------CChHHHHHHHHHhhccccccccccC
Q 018348 319 ASYLQAAALSAM--------------GMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 319 a~~~~g~~~~~~--------------g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
||+++|.++..+ +.++++++++.+|+.++|+|.++|.
T Consensus 181 AW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~ 231 (331)
T 3dss_A 181 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 231 (331)
T ss_dssp HHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999988 5699999999999999999999984
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.22 E-value=5.8e-11 Score=103.08 Aligned_cols=104 Identities=12% Similarity=-0.035 Sum_probs=96.7
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc--------CCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHh----
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 312 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---- 312 (357)
...+..+...|..+...|++++|+..|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 566788999999999999999999999999998 466 6789999999999999999999999999999
Q ss_pred ----CCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccc
Q 018348 313 ----SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 313 ----~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 349 (357)
+|....+++++|.++..+|++++|+..|++++++.+.
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999998654
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.5e-11 Score=92.93 Aligned_cols=73 Identities=12% Similarity=-0.062 Sum_probs=69.7
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 282 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 282 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
.+..+.++|.++...|++++|+..|+++++++|+++.+|+++|.++..+|+|++|+.+|+++++++|++..++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 75 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAY 75 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 5678999999999999999999999999999999999999999999999999999999999999999987665
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.21 E-value=3.6e-11 Score=86.00 Aligned_cols=77 Identities=16% Similarity=0.067 Sum_probs=70.1
Q ss_pred CCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 278 GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 278 ~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|.....+++++|.++...|++++|+..++++++++|+++.+++++|.++..+|++++|+..|+++++++|++..++
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 80 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAK 80 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHH
Confidence 34325778999999999999999999999999999999999999999999999999999999999999999887654
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.20 E-value=4e-11 Score=106.07 Aligned_cols=104 Identities=15% Similarity=0.122 Sum_probs=89.9
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc------CCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc---
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 316 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--- 316 (357)
..+..+...|..++..|+|++|+..|++|++. ++.....+++|+|.+|..+|++++|+.++++|+++.+..
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH
Confidence 34567899999999999999999999999952 111145689999999999999999999999999987654
Q ss_pred ---hHHHHHHHHHHHHcCC-hHHHHHHHHHhhccccc
Q 018348 317 ---HIASYLQAAALSAMGM-ENEAQVALKEGTTLEAK 349 (357)
Q Consensus 317 ---~~a~~~~g~~~~~~g~-~~~A~~~~~~al~l~~~ 349 (357)
+.+|+++|.++..+|+ +++|+.+|++|+++...
T Consensus 233 ~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~ 269 (293)
T 3u3w_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 7899999999999995 79999999999987653
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.20 E-value=6.4e-11 Score=105.56 Aligned_cols=106 Identities=12% Similarity=-0.031 Sum_probs=93.6
Q ss_pred hH-HHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHh-cCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 248 TL-NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM-SDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 248 ~~-~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.. .|...|..+.+.|++++|+..|++|++.+|. ...+|...+..... .|++++|+..|+++++++|+++.+|..+|.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 211 (308)
T 2ond_A 133 PTLVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYID 211 (308)
T ss_dssp THHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 44 7999999999999999999999999999999 78888766655433 799999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcc---ccc-ccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTL---EAK-KNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l---~~~-~~~a~ 354 (357)
++..+|++++|+..|++|++. +|+ ....|
T Consensus 212 ~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~ 244 (308)
T 2ond_A 212 YLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIW 244 (308)
T ss_dssp HHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 999999999999999999995 554 33343
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.20 E-value=9.1e-11 Score=88.71 Aligned_cols=80 Identities=4% Similarity=-0.144 Sum_probs=73.7
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+..+...|..++..|+|++|+..|+++++++|+ ++.+++++|.++..+|++++|+..++++++++|+++.......
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 567888999999999999999999999999999999 8999999999999999999999999999999999988754333
Q ss_pred H
Q 018348 325 A 325 (357)
Q Consensus 325 ~ 325 (357)
.
T Consensus 103 a 103 (117)
T 3k9i_A 103 A 103 (117)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=2.5e-10 Score=86.86 Aligned_cols=88 Identities=10% Similarity=-0.014 Sum_probs=83.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..+...|..++..|++++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|++..+++.+|.
T Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 122 (131)
T 2vyi_A 44 ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKI 122 (131)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 45778899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChH
Q 018348 326 ALSAMGMEN 334 (357)
Q Consensus 326 ~~~~~g~~~ 334 (357)
++..+|+++
T Consensus 123 ~~~~~~~~~ 131 (131)
T 2vyi_A 123 AELKLREAP 131 (131)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHhcCC
Confidence 999999863
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.20 E-value=6.3e-11 Score=105.61 Aligned_cols=106 Identities=11% Similarity=0.010 Sum_probs=93.6
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc-----chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc----
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 316 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 316 (357)
..+..+.+.|..+.. |+|++|+..|++|+++.+.. ...++.++|.+|..+|++++|+.+|++++++.|..
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 456788999999999 99999999999999987652 15689999999999999999999999999987754
Q ss_pred --hHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 317 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 317 --~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
..+++++|.++..+|++++|+.+|++++ ++|....+
T Consensus 193 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~ 230 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGS 230 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTS
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCC
Confidence 3478899999999999999999999999 99987643
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.20 E-value=3.6e-11 Score=104.39 Aligned_cols=101 Identities=12% Similarity=-0.029 Sum_probs=93.8
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcC--------CCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHh----
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG--------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 312 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~--------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---- 312 (357)
...+..+...|..++..|+|++|+..|++++++. |. ...++.++|.+|..+|++++|+..+.+++++
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999873 54 6778999999999999999999999999998
Q ss_pred ----CCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcc
Q 018348 313 ----SPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 346 (357)
Q Consensus 313 ----~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 346 (357)
+|....+++++|.++..+|++++|+..|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5888999999999999999999999999999998
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.4e-10 Score=102.22 Aligned_cols=104 Identities=11% Similarity=0.009 Sum_probs=94.9
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc--------CCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHh----
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 312 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---- 312 (357)
...+..+...|..++..|++++|+..|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 566778899999999999999999999999998 666 6788999999999999999999999999984
Q ss_pred ---------------------------------------------CCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccc
Q 018348 313 ---------------------------------------------SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 347 (357)
Q Consensus 313 ---------------------------------------------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 347 (357)
+|....+++.+|.+|..+|++++|+.+|++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 47778899999999999999999999999999998
Q ss_pred cc
Q 018348 348 AK 349 (357)
Q Consensus 348 ~~ 349 (357)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 76
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.2e-11 Score=114.40 Aligned_cols=108 Identities=13% Similarity=0.025 Sum_probs=96.4
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchH------HHhhHHHHHHh---cCChHHHHHHHHHHHHhCCCc
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT------VYARRSLCYLM---SDMPQDALNDAMQAQIISPIW 316 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~------~~~~~a~~~~~---~~~~~~A~~~~~~al~l~p~~ 316 (357)
.....+...|..++..|++++|+..|+++++.+|+ +.. ++.++|.++.. .|++++|+..++++++++|++
T Consensus 370 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 448 (514)
T 2gw1_A 370 EAPEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRS 448 (514)
T ss_dssp TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTC
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCccc
Confidence 34667788899999999999999999999999888 544 88899999999 999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 317 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 317 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+.+++.+|.++..+|++++|+..|+++++++|++..++
T Consensus 449 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 486 (514)
T 2gw1_A 449 EQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKL 486 (514)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHH
Confidence 99999999999999999999999999999999887654
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.19 E-value=7.5e-11 Score=87.65 Aligned_cols=69 Identities=13% Similarity=0.051 Sum_probs=66.8
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 282 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 282 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
+...+.++|.++...|++++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 467889999999999999999999999999999999999999999999999999999999999999997
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.19 E-value=6.7e-11 Score=111.54 Aligned_cols=91 Identities=13% Similarity=0.097 Sum_probs=83.9
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
+..+.++|..+++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..+|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 678899999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHH
Q 018348 328 SAMGMENEAQVA 339 (357)
Q Consensus 328 ~~~g~~~~A~~~ 339 (357)
..+|++++|...
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.19 E-value=6.6e-11 Score=98.24 Aligned_cols=97 Identities=7% Similarity=0.030 Sum_probs=84.4
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
+..+...|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+.+|+++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 567889999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHH-HHHHHhhc
Q 018348 328 SAMGMENEAQ-VALKEGTT 345 (357)
Q Consensus 328 ~~~g~~~~A~-~~~~~al~ 345 (357)
..+++++++. ..|.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999888 44554443
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.4e-10 Score=91.72 Aligned_cols=84 Identities=6% Similarity=-0.115 Sum_probs=79.0
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+..+...|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+.+|+++++++|++..+|+++|
T Consensus 42 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 120 (164)
T 3sz7_A 42 PANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRG 120 (164)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHH
T ss_pred CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 357788999999999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred HHHHH
Q 018348 325 AALSA 329 (357)
Q Consensus 325 ~~~~~ 329 (357)
.....
T Consensus 121 l~~~~ 125 (164)
T 3sz7_A 121 LETTK 125 (164)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77554
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.18 E-value=2e-10 Score=93.53 Aligned_cols=85 Identities=13% Similarity=0.000 Sum_probs=78.6
Q ss_pred hccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc--hHHHHHHHHHHHHcCChHHHH
Q 018348 260 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQAAALSAMGMENEAQ 337 (357)
Q Consensus 260 ~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~g~~~~A~ 337 (357)
..++..+|+..|+++++++|+ ++.+++++|.++...|++++|+..++++++++|++ ..+++++|.++..+|++++|+
T Consensus 86 ~~~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~ 164 (176)
T 2r5s_A 86 QQAAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIA 164 (176)
T ss_dssp HHHTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHH
T ss_pred hhcccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHH
Confidence 334556789999999999999 89999999999999999999999999999999986 669999999999999999999
Q ss_pred HHHHHhhc
Q 018348 338 VALKEGTT 345 (357)
Q Consensus 338 ~~~~~al~ 345 (357)
..|+++|.
T Consensus 165 ~~y~~al~ 172 (176)
T 2r5s_A 165 SKYRRQLY 172 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999874
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.18 E-value=3.5e-11 Score=95.22 Aligned_cols=72 Identities=15% Similarity=0.030 Sum_probs=67.5
Q ss_pred hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCC-------chH-----HHHHHHHHHHHcCChHHHHHHHHHhhcc----
Q 018348 283 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPI-------WHI-----ASYLQAAALSAMGMENEAQVALKEGTTL---- 346 (357)
Q Consensus 283 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~-------~~~-----a~~~~g~~~~~~g~~~~A~~~~~~al~l---- 346 (357)
+..+.++|..+...|++++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 456788999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---cccccccc
Q 018348 347 ---EAKKNSTA 354 (357)
Q Consensus 347 ---~~~~~~a~ 354 (357)
+|++..+|
T Consensus 91 ~e~~pd~~~A~ 101 (159)
T 2hr2_A 91 GELNQDEGKLW 101 (159)
T ss_dssp CCTTSTHHHHH
T ss_pred ccCCCchHHHH
Confidence 99998888
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.4e-10 Score=102.07 Aligned_cols=111 Identities=7% Similarity=-0.120 Sum_probs=99.3
Q ss_pred hhHhhHHHHHHHhHHHhccC----------HHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCC--hHHHHHHHHHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKD----------LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM--PQDALNDAMQAQI 311 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~----------~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~al~ 311 (357)
..+....|+.++..+...+. +++++..+++++..+|. ++.+|.+|+.++..+++ +++++..++++++
T Consensus 60 nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~ 138 (331)
T 3dss_A 60 NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLE 138 (331)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHH
Confidence 34666777888887777665 78999999999999999 89999999999999984 8999999999999
Q ss_pred hCCCchHHHHHHHHHHHHcCC-hHHHHHHHHHhhccccccccccC
Q 018348 312 ISPIWHIASYLQAAALSAMGM-ENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 312 l~p~~~~a~~~~g~~~~~~g~-~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
++|.+..||+.++.++..+|. +++++++++++++.+|.|.+||.
T Consensus 139 ~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~ 183 (331)
T 3dss_A 139 ADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 183 (331)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 999999999999999999999 59999999999999999999985
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-10 Score=103.25 Aligned_cols=103 Identities=16% Similarity=0.120 Sum_probs=90.2
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHh---hcCCCcch----HHHhhHHHHHHhcCChHHHHHHHHHHHHhCCC---
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFI---DAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQIISPI--- 315 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai---~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~--- 315 (357)
..+..+...|..++..|+|++|+..|++|+ +..++ +. .+++++|.+|..+|++++|+.++++|+++.++
T Consensus 153 ~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~ 231 (293)
T 2qfc_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINS 231 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTB
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc
Confidence 346789999999999999999999999999 44555 22 68999999999999999999999999998753
Q ss_pred ---chHHHHHHHHHHHHcCChHHH-HHHHHHhhccccc
Q 018348 316 ---WHIASYLQAAALSAMGMENEA-QVALKEGTTLEAK 349 (357)
Q Consensus 316 ---~~~a~~~~g~~~~~~g~~~~A-~~~~~~al~l~~~ 349 (357)
...+|+++|.+|..+|++++| ..+|++|+++...
T Consensus 232 ~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~ 269 (293)
T 2qfc_A 232 MALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp CSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 278899999999999999999 8889999987543
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-10 Score=111.48 Aligned_cols=103 Identities=9% Similarity=0.002 Sum_probs=59.6
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
+..+...|..+.+.|++++|+..|+++++++|. +..+|..++.+|.+.|++++|++.|+++++++|++..+|+.+|.+|
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 451 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQ-FGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQH 451 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 444555555555555566665555555555555 5555555555555555555555555555555555555555555555
Q ss_pred HHcCChHHHHHHHHHhhccccccc
Q 018348 328 SAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 328 ~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
...|++++|++.|+++++++|.+.
T Consensus 452 ~~~g~~~~A~~~~~~~~~~~~~~~ 475 (597)
T 2xpi_A 452 MQLGNILLANEYLQSSYALFQYDP 475 (597)
T ss_dssp HHHTCHHHHHHHHHHHHHHCCCCH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCh
Confidence 555555555555555555555544
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.16 E-value=9.7e-11 Score=92.61 Aligned_cols=101 Identities=12% Similarity=0.117 Sum_probs=76.7
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc-----chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc------h
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------H 317 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~------~ 317 (357)
..+...|..++..|++++|+..|++++++.+.. ...++.++|.++..+|++++|+..+++++++.+.. .
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 467778888888888888888888888765441 14567778888888888888888888888775443 3
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhhccccc
Q 018348 318 IASYLQAAALSAMGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 318 ~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 349 (357)
.+++.+|.++..+|++++|+..+++++++..+
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 46778888888888888888888888877654
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.15 E-value=6.7e-11 Score=105.42 Aligned_cols=106 Identities=9% Similarity=-0.066 Sum_probs=93.8
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc-----chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc---
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 316 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--- 316 (357)
...+..+.+.|..+...|+|++|+..|++|+++.+.. ...++.++|.+|.. |++++|+.+|++|+++.|..
T Consensus 73 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~ 151 (307)
T 2ifu_A 73 FHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERL 151 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCCh
Confidence 3557788999999999999999999999999985431 24678999999999 99999999999999998754
Q ss_pred ---hHHHHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 317 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 317 ---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
..+++++|.+|..+|+|++|+.+|++++++.+++.
T Consensus 152 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 152 RQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999988764
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=8.3e-11 Score=89.70 Aligned_cols=71 Identities=14% Similarity=-0.028 Sum_probs=67.2
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 284 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 284 ~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
..++.+|.++...|++++|+..++++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|++..++
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 88 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 88 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999987665
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.3e-10 Score=93.16 Aligned_cols=90 Identities=10% Similarity=0.006 Sum_probs=80.2
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch-HHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-IASYLQ 323 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-~a~~~~ 323 (357)
...+..+.++|..++..|+|++|+..++++|+++|+ +..+|+++|.+|..+|++++|+.+|+++++++|++. .+...+
T Consensus 60 ~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l 138 (162)
T 3rkv_A 60 RKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREM 138 (162)
T ss_dssp HTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 345678899999999999999999999999999999 899999999999999999999999999999999999 567777
Q ss_pred HHHHHHcCChHH
Q 018348 324 AAALSAMGMENE 335 (357)
Q Consensus 324 g~~~~~~g~~~~ 335 (357)
+.+...++++.+
T Consensus 139 ~~~~~~~~~~~~ 150 (162)
T 3rkv_A 139 KIVTERRAEKKA 150 (162)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 777766655443
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.14 E-value=9.5e-11 Score=92.56 Aligned_cols=76 Identities=13% Similarity=-0.055 Sum_probs=68.8
Q ss_pred hhhHhhHHHHHHHhHHHhccCH----------HHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcC-----------ChHH
Q 018348 243 DQMQETLNSKKKGDVAFRQKDL----------KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-----------MPQD 301 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~----------~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-----------~~~~ 301 (357)
.....++.|.+.|.++...+++ ++||..|++||+++|+ ...+|+++|.+|..+| ++++
T Consensus 31 l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~e 109 (158)
T 1zu2_A 31 SNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDL 109 (158)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHH
Confidence 4457888999999999999876 5999999999999999 8999999999999885 8999
Q ss_pred HHHHHHHHHHhCCCchHH
Q 018348 302 ALNDAMQAQIISPIWHIA 319 (357)
Q Consensus 302 A~~~~~~al~l~p~~~~a 319 (357)
|+++|++|++++|++...
T Consensus 110 A~~~~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 110 ATQFFQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHhCCCCHHH
Confidence 999999999999998543
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.14 E-value=4.7e-10 Score=99.09 Aligned_cols=102 Identities=9% Similarity=-0.031 Sum_probs=87.9
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc-----chHHHhhHHHHHHhcCChHHHHHHHHHHH---HhCCCch--
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQ---IISPIWH-- 317 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al---~l~p~~~-- 317 (357)
+..++..|..+...|+|++|+..|++|+++.+.. ...+++++|.+|..+|++++|+..|++|+ +..|++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~ 194 (293)
T 2qfc_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc
Confidence 3445678899999999999999999999875541 14589999999999999999999999999 5556533
Q ss_pred --HHHHHHHHHHHHcCChHHHHHHHHHhhccccc
Q 018348 318 --IASYLQAAALSAMGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 318 --~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 349 (357)
.+++++|.+|..+|+|++|+.+|++|+++.++
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999998754
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-10 Score=86.41 Aligned_cols=77 Identities=10% Similarity=-0.015 Sum_probs=71.8
Q ss_pred cCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccc--ccccc
Q 018348 277 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK--KNSTA 354 (357)
Q Consensus 277 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~--~~~a~ 354 (357)
++|+ +..++.++|.++...|++++|+..++++++++|.+..+|+++|.++..+|++++|+.+|+++++++|+ +..++
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 79 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVW 79 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHH
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHH
Confidence 3677 78899999999999999999999999999999999999999999999999999999999999999998 65443
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1e-10 Score=105.04 Aligned_cols=112 Identities=9% Similarity=-0.110 Sum_probs=104.9
Q ss_pred hhhHhhHHHHHHHhHHHhc-c-CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChH--------HHHHHHHHHHHh
Q 018348 243 DQMQETLNSKKKGDVAFRQ-K-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ--------DALNDAMQAQII 312 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~-~-~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~--------~A~~~~~~al~l 312 (357)
...+....|..++..+... + ++++++..++++++.+|. +..+|..|+.+...+|.++ ++++.++++++.
T Consensus 118 ~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpk-Ny~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~ 196 (349)
T 3q7a_A 118 QNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPK-NYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV 196 (349)
T ss_dssp TTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTT-CHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred hCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHh
Confidence 3446778889999999887 7 999999999999999999 9999999999999999988 999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCC-------hHHHHHHHHHhhccccccccccC
Q 018348 313 SPIWHIASYLQAAALSAMGM-------ENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 313 ~p~~~~a~~~~g~~~~~~g~-------~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+|.+..||+++|.++..+++ +++++++++++++++|+|.++|.
T Consensus 197 dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~ 246 (349)
T 3q7a_A 197 DGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWN 246 (349)
T ss_dssp CTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999999998 79999999999999999999984
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.8e-10 Score=105.73 Aligned_cols=106 Identities=15% Similarity=0.085 Sum_probs=94.9
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc-----chHHHhhHHHHHHhcCChHHHHHHHHHHHH-----hC
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQI-----IS 313 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----l~ 313 (357)
....+..+...|..+...|+|++|+..|++|+++.+.. ...++.++|.+|..+|++++|+.++++|++ .+
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 34567789999999999999999999999999886541 235899999999999999999999999999 56
Q ss_pred -CCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccc
Q 018348 314 -PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 314 -p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 349 (357)
|....+++++|.++..+|++++|+.+|++|+++.+.
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999998654
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.13 E-value=3.4e-10 Score=103.63 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=89.6
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
....+..+.+.|..+++.|+|++|+..|++|++++|+ ++.+++++|.+|..+|++++|+.+|++|++++|++..++..+
T Consensus 269 ~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l 347 (370)
T 1ihg_A 269 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 347 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3456788999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHH
Q 018348 324 AAALSAMGMENEAQVA 339 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~ 339 (357)
+.++..++++++|.+.
T Consensus 348 ~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 348 LKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988764
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.12 E-value=2.4e-10 Score=83.86 Aligned_cols=85 Identities=9% Similarity=0.053 Sum_probs=72.4
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch--HHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--IASYLQ 323 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~--~a~~~~ 323 (357)
+.+..++..|..++..|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..+++++++.|... .+...+
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l 83 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSEL 83 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHH
Confidence 45678899999999999999999999999999999 899999999999999999999999999999987543 333444
Q ss_pred HHHHHHcC
Q 018348 324 AAALSAMG 331 (357)
Q Consensus 324 g~~~~~~g 331 (357)
..++...+
T Consensus 84 ~~~l~~~~ 91 (100)
T 3ma5_A 84 QDAKLKAE 91 (100)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcc
Confidence 44444443
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=99.12 E-value=6.7e-10 Score=96.76 Aligned_cols=108 Identities=16% Similarity=0.102 Sum_probs=93.6
Q ss_pred hhhhhhhhhhhHhhHHHHHHHhHHHh----ccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHh----cCChHHHHHHH
Q 018348 235 ELSFQMWTDQMQETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDA 306 (357)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~ 306 (357)
...|+...+ ...+..++..|..+.. .+++++|+..|+++++.+ ++.+++++|.+|.. .+++++|+..|
T Consensus 26 ~~~~~~a~~-~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~ 101 (273)
T 1ouv_A 26 KKYFEKACD-LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYY 101 (273)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred HHHHHHHHH-CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHH
Confidence 334444333 4667889999999999 999999999999999985 47888999999999 99999999999
Q ss_pred HHHHHhCCCchHHHHHHHHHHHH----cCChHHHHHHHHHhhcccc
Q 018348 307 MQAQIISPIWHIASYLQAAALSA----MGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 307 ~~al~l~p~~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~~ 348 (357)
+++++.+ ++.+++++|.+|.. .|++++|+.+|++|+++++
T Consensus 102 ~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 102 SKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 9999984 88999999999999 9999999999999998864
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.9e-10 Score=95.14 Aligned_cols=109 Identities=11% Similarity=-0.077 Sum_probs=84.9
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc---CCC---cchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCC--
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA---GTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI-- 315 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~---~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~-- 315 (357)
....+..+...|..+...|++++|+..|++++++ .++ ....++.++|.++..+|++++|+..+++++++.+.
T Consensus 62 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 141 (203)
T 3gw4_A 62 HTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD 141 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc
Confidence 3456777888899999999999999999999887 332 13456888899999999999999999998876432
Q ss_pred c----hHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 316 W----HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 316 ~----~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
+ ..++.++|.++..+|++++|+..|++|+++-.....
T Consensus 142 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 182 (203)
T 3gw4_A 142 DQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELED 182 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC
Confidence 1 334688899999999999999999999887665443
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.5e-10 Score=84.44 Aligned_cols=68 Identities=15% Similarity=0.090 Sum_probs=65.1
Q ss_pred hhHHHHHHhcCChHHHHHHHHHHHHhCCCchH-HHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 287 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHI-ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 287 ~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~-a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+++|.++...|++++|+..++++++++|+++. +|+++|.++..+|++++|+.+|+++++++|++..++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 56899999999999999999999999999999 999999999999999999999999999999998765
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.11 E-value=2e-10 Score=101.50 Aligned_cols=103 Identities=10% Similarity=-0.019 Sum_probs=87.5
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc-----hHHHhhHHHHHHhcCChHHHHHHHHHHHHh-------CCCc
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-----PTVYARRSLCYLMSDMPQDALNDAMQAQII-------SPIW 316 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-------~p~~ 316 (357)
.-+...|..+...|+|++|+..|++|+++.+... ..++.++|.+|..+|++++|+.+|++|++. .+..
T Consensus 116 ~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 195 (293)
T 3u3w_A 116 QWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFD 195 (293)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHH
Confidence 3445589999999999999999999999654411 237999999999999999999999999952 2344
Q ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 317 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 317 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
..+++++|.+|..+|+|++|+.++++|+++.++..
T Consensus 196 ~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 196 VKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 56899999999999999999999999999987653
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.3e-10 Score=99.54 Aligned_cols=106 Identities=12% Similarity=-0.048 Sum_probs=92.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc-chHHHhhHHHHHHhcCChHHHHHHHHHHHHhC--CC-chHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS--PI-WHIASY 321 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~--p~-~~~a~~ 321 (357)
..+ ..+.+|..+++.|+|++|+..|++++...+.. ...+++++|.++..+|++++|+..|++++.-. |. .+++++
T Consensus 134 ~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~ 212 (282)
T 4f3v_A 134 EHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAW 212 (282)
T ss_dssp HHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHH
T ss_pred chH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHH
Confidence 444 78999999999999999999999888764331 14589999999999999999999999999655 66 778999
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 322 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 322 ~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
++|.++..+|+.++|...|++++..+|+ ..+
T Consensus 213 ~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~ 243 (282)
T 4f3v_A 213 YLAMARRSQGNESAAVALLEWLQTTHPE-PKV 243 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHH
Confidence 9999999999999999999999999998 544
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.5e-10 Score=99.73 Aligned_cols=102 Identities=13% Similarity=-0.030 Sum_probs=93.3
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc--------CCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhC--
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS-- 313 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~-- 313 (357)
....+..+...|..++..|++++|+..|++++++ .|. ...++.++|.+|...|++++|+..+++++++.
T Consensus 65 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 65 HPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999999987 344 57789999999999999999999999999884
Q ss_pred ------CCchHHHHHHHHHHHHcCChHHHHHHHHHhhcc
Q 018348 314 ------PIWHIASYLQAAALSAMGMENEAQVALKEGTTL 346 (357)
Q Consensus 314 ------p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 346 (357)
|....+++++|.++..+|++++|+..|++++++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 777889999999999999999999999999998
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.5e-10 Score=104.35 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=95.7
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcch----HHHhhHHHHHHhcCChHHHHHHHHHHHHh------CC
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQII------SP 314 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p 314 (357)
...+..+...|..++..|+|++|+..|+++++++|+ +. .++.++|.+|..+|++++|+..+++++++ +|
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCch
Confidence 356778889999999999999999999999999999 55 57899999999999999999999999998 68
Q ss_pred CchHHHHHHHHHHHHcCChHHHHHHHHHhhcccc
Q 018348 315 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 315 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
....+++.+|.+|..+|++++|+..|++++++.+
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 157 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLAR 157 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999844
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.10 E-value=4.1e-10 Score=100.00 Aligned_cols=104 Identities=16% Similarity=0.165 Sum_probs=95.0
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc----hHHHhhHHHHHHhcCChHHHHHHHHHHHHh------CCCc
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIW 316 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p~~ 316 (357)
....+...|..++..|+|++|+..|+++++.+|+ + ..++.++|.+|...|++++|+..+++++++ .|..
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 3567888999999999999999999999999999 5 467889999999999999999999999988 5667
Q ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 317 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 317 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
..+++.+|.++..+|++++|+..|++++++.+...
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 117 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 117 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc
Confidence 88999999999999999999999999999877654
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.10 E-value=2.4e-10 Score=88.39 Aligned_cols=78 Identities=10% Similarity=0.014 Sum_probs=71.5
Q ss_pred hcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 276 DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 276 ~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
..++. ++..++++|.++...|++++|+..|.++++++|+++.+|+++|.++..+|++++|+.+|+++++++|++..++
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHH
Confidence 34566 7889999999999999999999999999999999999999999999999999999999999999999987654
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.8e-10 Score=103.38 Aligned_cols=106 Identities=11% Similarity=0.001 Sum_probs=95.3
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCC-----cchHHHhhHHHHHHhcCChHHHHHHHHHHHH-----hCC
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQI-----ISP 314 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----l~p 314 (357)
...+..+...|..+...|+|++|+..|++|+++.+. ....++.++|.+|..+|++++|+.++++|++ .+|
T Consensus 179 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 258 (378)
T 3q15_A 179 IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPD 258 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGG
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCCh
Confidence 356788899999999999999999999999987432 1346899999999999999999999999999 888
Q ss_pred CchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 315 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 315 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
....+++++|.++..+|++++|+..|++|+++.+..
T Consensus 259 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 294 (378)
T 3q15_A 259 LLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR 294 (378)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 889999999999999999999999999999986653
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.7e-10 Score=89.16 Aligned_cols=106 Identities=8% Similarity=0.039 Sum_probs=92.8
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc-----hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc---
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 316 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--- 316 (357)
...+..+...|..++..|+|++|+..|++++++.+... ..++.++|.+|..+|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 45678899999999999999999999999998754321 3578899999999999999999999999987653
Q ss_pred ---hHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 317 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 317 ---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
..+++++|.++..+|++++|+..+++++++.+..
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 122 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 122 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 6689999999999999999999999999886543
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=4.2e-10 Score=99.30 Aligned_cols=98 Identities=9% Similarity=-0.029 Sum_probs=91.6
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc--hHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQA 324 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g 324 (357)
........+..+...+++++|+..|+++++.+|+ +..+++++|.+|...|++++|+..+.++++++|++ ..++.++|
T Consensus 184 ~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~ 262 (287)
T 3qou_A 184 TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQ 262 (287)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHH
Confidence 3455666777888999999999999999999999 89999999999999999999999999999999999 89999999
Q ss_pred HHHHHcCChHHHHHHHHHhhc
Q 018348 325 AALSAMGMENEAQVALKEGTT 345 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~ 345 (357)
.++..+|+.++|+..|++++.
T Consensus 263 ~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 263 EILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCcHHHHHHHHHH
Confidence 999999999999999999985
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.8e-10 Score=103.42 Aligned_cols=104 Identities=16% Similarity=0.165 Sum_probs=95.3
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc----hHHHhhHHHHHHhcCChHHHHHHHHHHHHh------CCCc
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIW 316 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p~~ 316 (357)
.+..+...|..++..|+|++|+..|+++++++|+ + ..++.++|.+|...|++++|+..+++++++ .|..
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 86 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 86 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHH
Confidence 4667889999999999999999999999999998 5 367899999999999999999999999988 5667
Q ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 317 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 317 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
..+++.+|.++..+|++++|+..|++++++.++..
T Consensus 87 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 121 (406)
T 3sf4_A 87 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 121 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc
Confidence 88999999999999999999999999999987654
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=3.5e-10 Score=88.37 Aligned_cols=91 Identities=12% Similarity=0.005 Sum_probs=82.3
Q ss_pred CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcC---ChHHHHHHHHHHHHhC-C-CchHHHHHHHHHHHHcCChHHHH
Q 018348 263 DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIIS-P-IWHIASYLQAAALSAMGMENEAQ 337 (357)
Q Consensus 263 ~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~g~~~~A~ 337 (357)
..+.+.+.|.+++..++. +..+.++.|.|+.+.+ +.++|+..++..++.+ | +..+++|++|.+++++|+|++|+
T Consensus 13 ~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHH
Confidence 456788888899988887 8899999999999988 7779999999999999 7 67999999999999999999999
Q ss_pred HHHHHhhcccccccccc
Q 018348 338 VALKEGTTLEAKKNSTA 354 (357)
Q Consensus 338 ~~~~~al~l~~~~~~a~ 354 (357)
++++++|+++|+|..|.
T Consensus 92 ~y~~~lL~ieP~n~QA~ 108 (152)
T 1pc2_A 92 KYVRGLLQTEPQNNQAK 108 (152)
T ss_dssp HHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhcCCCCHHHH
Confidence 99999999999997664
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.2e-10 Score=106.65 Aligned_cols=106 Identities=12% Similarity=0.048 Sum_probs=91.4
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhc-------------------CChHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-------------------DMPQDALND 305 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~-------------------~~~~~A~~~ 305 (357)
......+...|..+...|++++|+..|++|++.+|+ ++.++.++|.+|... +.+++|+..
T Consensus 244 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 322 (472)
T 4g1t_A 244 PGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAH 322 (472)
T ss_dssp SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHH
Confidence 356677889999999999999999999999999999 889999999888643 346788888
Q ss_pred HHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 306 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 306 ~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
++++++++|.+..+++.+|.++..+|+|++|+.+|++|+++++++.
T Consensus 323 ~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 323 LKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 8888899998888888899999999999999999999988877654
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.9e-10 Score=103.39 Aligned_cols=103 Identities=10% Similarity=-0.051 Sum_probs=59.1
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc------chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch--
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-- 317 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-- 317 (357)
..+..+...|..++..|++++|+..|++|+++.+.. ...++.++|.+|..+|++++|+..+++|+++.+...
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 220 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQP 220 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCCh
Confidence 345555666666666666666666666666553321 123555666666666666666666666665543322
Q ss_pred ----HHHHHHHHHHHHcCChHHHHHHHHHhhcccc
Q 018348 318 ----IASYLQAAALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 318 ----~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
.+++++|.+|..+|++++|+.+|++|+++..
T Consensus 221 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 255 (383)
T 3ulq_A 221 QLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFE 255 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 3566666666666666666666666665543
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.06 E-value=2.1e-10 Score=100.94 Aligned_cols=105 Identities=7% Similarity=-0.031 Sum_probs=89.2
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch-----HHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-----IAS 320 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-----~a~ 320 (357)
..+..+..+|..++..|+|++|+..|++|++++|+ +..+++++|.+|..+|++++|+.+|+++++++|++. .++
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~ 114 (281)
T 2c2l_A 36 LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIP 114 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHH
Confidence 56788999999999999999999999999999999 899999999999999999999999999999999652 111
Q ss_pred HHH--H----------------------HHHHHcCChHHHHHHHHHhhccccccc
Q 018348 321 YLQ--A----------------------AALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 321 ~~~--g----------------------~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
..+ + ......|++++|++.|++|++++|.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~~~p~~~ 169 (281)
T 2c2l_A 115 SALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDG 169 (281)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGTTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccchh
Confidence 111 1 011236899999999999999999764
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.04 E-value=1.5e-09 Score=78.46 Aligned_cols=72 Identities=14% Similarity=-0.091 Sum_probs=67.0
Q ss_pred CCCcchHHHhhHHHHHHhcCC---hHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 278 GTMVSPTVYARRSLCYLMSDM---PQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 278 ~p~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
+|+ ++.++..+|.+++..++ .++|...+++|+++||+++.+++.+|..+++.|+|++|+..|+++++.+|.+
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 577 89999999999976665 7999999999999999999999999999999999999999999999999983
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.04 E-value=4e-09 Score=82.20 Aligned_cols=81 Identities=11% Similarity=0.047 Sum_probs=76.4
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
...+...|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..++++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 788999999999999999999999999999999 8999999999999999999999999999999999999998888775
Q ss_pred HH
Q 018348 328 SA 329 (357)
Q Consensus 328 ~~ 329 (357)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 43
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.03 E-value=2e-09 Score=80.99 Aligned_cols=85 Identities=16% Similarity=0.164 Sum_probs=80.0
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.....+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|++..++..+|.
T Consensus 41 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 119 (125)
T 1na0_A 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 119 (125)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45667889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcC
Q 018348 326 ALSAMG 331 (357)
Q Consensus 326 ~~~~~g 331 (357)
++..+|
T Consensus 120 ~~~~~g 125 (125)
T 1na0_A 120 AKQKQG 125 (125)
T ss_dssp HHHHHC
T ss_pred HHHhcc
Confidence 988765
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.03 E-value=8.5e-10 Score=104.27 Aligned_cols=108 Identities=8% Similarity=-0.045 Sum_probs=91.6
Q ss_pred hhhhhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc-----CCCc--chHHHhhHHHHHHhcCChHHHHHHHHHHHH
Q 018348 239 QMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQI 311 (357)
Q Consensus 239 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 311 (357)
+.+.+..+.+....+++..+..+|+|++|+..|++++++ .+++ ....+.|+|.+|..+|+|++|+..++++++
T Consensus 300 e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~ 379 (490)
T 3n71_A 300 EVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVD 379 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 344555667777888899999999999999999999975 3331 456899999999999999999999999997
Q ss_pred hC-----C---CchHHHHHHHHHHHHcCChHHHHHHHHHhhcc
Q 018348 312 IS-----P---IWHIASYLQAAALSAMGMENEAQVALKEGTTL 346 (357)
Q Consensus 312 l~-----p---~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 346 (357)
+. | +-...++++|.+|..+|+|++|+..|++|+++
T Consensus 380 i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 380 GYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 63 3 44557999999999999999999999999986
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=3.4e-09 Score=92.21 Aligned_cols=98 Identities=11% Similarity=0.038 Sum_probs=89.2
Q ss_pred HhhHHHHHHHhHHHh----ccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHh----cCChHHHHHHHHHHHHhCCCch
Q 018348 246 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWH 317 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~ 317 (357)
..+..+...|..+.. .+++++|+..|++|++.+ ++.+++++|.+|.. .+++++|+..++++++++ ++
T Consensus 72 ~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~ 146 (273)
T 1ouv_A 72 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DG 146 (273)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CH
T ss_pred CCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cH
Confidence 467888999999999 999999999999999974 57889999999999 999999999999999986 67
Q ss_pred HHHHHHHHHHHH----cCChHHHHHHHHHhhcccc
Q 018348 318 IASYLQAAALSA----MGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 318 ~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~~ 348 (357)
.+++++|.+|.. .+++++|+.+|++++++++
T Consensus 147 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 181 (273)
T 1ouv_A 147 DGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD 181 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 899999999999 9999999999999998753
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.5e-09 Score=91.22 Aligned_cols=102 Identities=12% Similarity=-0.022 Sum_probs=80.4
Q ss_pred HhhHHHHHHHhHHHhcc----CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHh----cCChHHHHHHHHHHHHhCC--C
Q 018348 246 QETLNSKKKGDVAFRQK----DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISP--I 315 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~----~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p--~ 315 (357)
..+.+++..|..+.. + ++++|+..|++|++ +. ++.+++++|.+|.. .+++++|+..|++|++..| .
T Consensus 48 g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~ 123 (212)
T 3rjv_A 48 GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA 123 (212)
T ss_dssp TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHH
T ss_pred CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcc
Confidence 466777888888877 6 88888888888865 44 56778888888887 7788888888888888887 4
Q ss_pred chHHHHHHHHHHHH----cCChHHHHHHHHHhhcccccccc
Q 018348 316 WHIASYLQAAALSA----MGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 316 ~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
++.+++++|.+|.. .+++++|+.+|++|+++ +.+..
T Consensus 124 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~ 163 (212)
T 3rjv_A 124 AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGY 163 (212)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTH
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHH
Confidence 58888888888888 88888888888888877 54443
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.98 E-value=3.2e-09 Score=79.06 Aligned_cols=82 Identities=9% Similarity=-0.059 Sum_probs=77.1
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
.....+...|..++..|+|++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|++..++..++.
T Consensus 36 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 114 (118)
T 1elw_A 36 HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQN 114 (118)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45678899999999999999999999999999999 89999999999999999999999999999999999999999887
Q ss_pred HHH
Q 018348 326 ALS 328 (357)
Q Consensus 326 ~~~ 328 (357)
+..
T Consensus 115 ~~~ 117 (118)
T 1elw_A 115 MEA 117 (118)
T ss_dssp HHH
T ss_pred hhc
Confidence 753
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=3.6e-10 Score=98.14 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=50.6
Q ss_pred cHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 5 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT-SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 5 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
+|.+++.. .++..+..++.|++.+|.||| +.+ ++||||||.|||++. .++|+|||++...
T Consensus 159 ~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 159 TLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE-LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp BHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC-EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred cHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 66666531 234567889999999999999 888 999999999999998 8999999998764
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=100.25 Aligned_cols=104 Identities=9% Similarity=0.030 Sum_probs=65.6
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcch------HHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc---
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP------TVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 316 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~------~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--- 316 (357)
..+..+...|..++..|+|++|+..|++++++.+. .. .++.++|.+|..+|++++|+..+++++++.|..
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 263 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE-FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 263 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCc
Confidence 33455666666666666666666666666665444 22 256666666666666666666666666665544
Q ss_pred ---hHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 317 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 317 ---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
..+++.+|.++..+|++++|+..|++++++.+..
T Consensus 264 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 300 (406)
T 3sf4_A 264 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 300 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Confidence 5566666666666666666666666666665443
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-09 Score=100.67 Aligned_cols=104 Identities=10% Similarity=0.014 Sum_probs=86.9
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchH------HHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc---
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT------VYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 316 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~------~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--- 316 (357)
..+..+...|..++..|+|++|+..|++++++.+. ... ++.++|.+|..+|++++|+..+++++++.+..
T Consensus 221 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 299 (411)
T 4a1s_A 221 AQGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGER 299 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCH
Confidence 44567888899999999999999999999988765 333 78888999999999999999999999888754
Q ss_pred ---hHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 317 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 317 ---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
..+++.+|.++..+|++++|+.+|++++++.++.
T Consensus 300 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 336 (411)
T 4a1s_A 300 EVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQEL 336 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC
Confidence 6788888999999999999999999998886654
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-09 Score=89.54 Aligned_cols=104 Identities=11% Similarity=0.019 Sum_probs=91.9
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhh------cCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHh---CC--
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFID------AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---SP-- 314 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---~p-- 314 (357)
..+..+...|..++..|+|++|+..|+++++ ..+. ...++.++|.+|..+|++++|+..+.+++++ .+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 102 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED 102 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc
Confidence 4577889999999999999999999999999 4444 6778999999999999999999999999998 33
Q ss_pred --CchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 315 --IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 315 --~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
....+++++|.++..+|++++|+..|++++++.+..
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 140 (203)
T 3gw4_A 103 PLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA 140 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 346679999999999999999999999999876543
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.8e-09 Score=79.93 Aligned_cols=85 Identities=7% Similarity=-0.059 Sum_probs=72.9
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc--hHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQ 323 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~ 323 (357)
..+..+...|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..|+++++++|.. ..+...+
T Consensus 17 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l 95 (115)
T 2kat_A 17 DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKEL 95 (115)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHH
Confidence 45678899999999999999999999999999999 89999999999999999999999999999999854 3444444
Q ss_pred HHHHHHcC
Q 018348 324 AAALSAMG 331 (357)
Q Consensus 324 g~~~~~~g 331 (357)
...+..++
T Consensus 96 ~~~l~~l~ 103 (115)
T 2kat_A 96 QVFLRRLA 103 (115)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 55444444
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=3.3e-09 Score=98.66 Aligned_cols=100 Identities=10% Similarity=-0.108 Sum_probs=83.1
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhc-----CCCc--chHHHhhHHHHHHhcCChHHHHHHHHHHHHhC------
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------ 313 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~------ 313 (357)
.+....+.+......|+|++|+..|++++++ .|++ -...+.|+|.+|..+|+|++|+..+++++++.
T Consensus 297 ~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~ 376 (433)
T 3qww_A 297 YARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPV 376 (433)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCC
Confidence 3344455566666789999999999999985 3441 35679999999999999999999999999763
Q ss_pred --CCchHHHHHHHHHHHHcCChHHHHHHHHHhhcc
Q 018348 314 --PIWHIASYLQAAALSAMGMENEAQVALKEGTTL 346 (357)
Q Consensus 314 --p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 346 (357)
|+-...++++|.+|..+|+|++|+..|++|+++
T Consensus 377 ~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 377 YSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 444557999999999999999999999999986
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.93 E-value=9.9e-09 Score=78.19 Aligned_cols=83 Identities=11% Similarity=-0.044 Sum_probs=74.0
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc---hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..++..|..++..|+|++|+..|+++++.+|+ + +.+++++|.+|..+|++++|+..++++++.+|++..+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 68899999999999999999999999999999 7 7889999999999999999999999999999999988776666
Q ss_pred HHHHcCC
Q 018348 326 ALSAMGM 332 (357)
Q Consensus 326 ~~~~~g~ 332 (357)
+....++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 5544443
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.93 E-value=6.2e-09 Score=87.42 Aligned_cols=103 Identities=11% Similarity=-0.035 Sum_probs=92.2
Q ss_pred HhhHHHHHHHhHHHh----ccCHHHHHHHHHHHhhcCCC-cchHHHhhHHHHHHh----cCChHHHHHHHHHHHHhCCCc
Q 018348 246 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTM-VSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIW 316 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~p~-~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~ 316 (357)
..+.+++..|..+.. .+++++|+..|++|++..+. ..+.+++++|.+|.. .+++++|+..|++|+++ |.+
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~ 161 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT 161 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC
Confidence 567788999999998 89999999999999999983 147899999999999 88999999999999999 788
Q ss_pred hHHHHHHHHHHHHc-C-----ChHHHHHHHHHhhccccc
Q 018348 317 HIASYLQAAALSAM-G-----MENEAQVALKEGTTLEAK 349 (357)
Q Consensus 317 ~~a~~~~g~~~~~~-g-----~~~~A~~~~~~al~l~~~ 349 (357)
+.+++++|.+|... | ++++|+.+|++|++....
T Consensus 162 ~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~ 200 (212)
T 3rjv_A 162 GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFD 200 (212)
T ss_dssp THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCH
Confidence 88999999999865 3 899999999999987543
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.1e-09 Score=95.30 Aligned_cols=101 Identities=9% Similarity=0.042 Sum_probs=50.8
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc-----chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc------
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------ 316 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~------ 316 (357)
+..+...|..++..|++++|+..|++++++.+.. ...++.++|.++...|++++|+..+++++++.+..
T Consensus 183 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 262 (338)
T 3ro2_A 183 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 262 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHH
Confidence 3344555555555555555555555555443320 01244555555555555555555555555544433
Q ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHhhcccc
Q 018348 317 HIASYLQAAALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 317 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
..+++.+|.++..+|++++|+..|++++++.+
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 294 (338)
T 3ro2_A 263 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 294 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 44455555555555555555555555555443
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.91 E-value=1.1e-08 Score=75.54 Aligned_cols=78 Identities=14% Similarity=-0.027 Sum_probs=70.6
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcC-------CCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAG-------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 320 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~-------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 320 (357)
+.+.+..|..++..|+|..|+..|++|++.. .. ...++.++|.||.++|+++.|+..++++++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 5678899999999999999999999999863 23 578899999999999999999999999999999999998
Q ss_pred HHHHHH
Q 018348 321 YLQAAA 326 (357)
Q Consensus 321 ~~~g~~ 326 (357)
.+++..
T Consensus 84 ~n~~~~ 89 (104)
T 2v5f_A 84 GNLKYF 89 (104)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 888743
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.91 E-value=4.6e-09 Score=96.12 Aligned_cols=106 Identities=12% Similarity=-0.005 Sum_probs=74.9
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc------chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCC----
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISP---- 314 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p---- 314 (357)
...+..+...|..++..|++++|+..|++|+++.+.. ...++.++|.+|..+|++++|++.+++|+++.+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~ 217 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN 217 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC
Confidence 3556677777778888888888888888877764321 234677778888888888888888888777633
Q ss_pred --CchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 315 --IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 315 --~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
....+++++|.+|..+|++++|+.+|++|+++....
T Consensus 218 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 218 DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence 224567777888888888888888888877765443
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.85 E-value=2.6e-08 Score=89.37 Aligned_cols=103 Identities=15% Similarity=0.104 Sum_probs=84.1
Q ss_pred hhHHHHHHHhHHHhcc---CHHHHHHHHHHHhhcCCCcchHHHhhHHH--------------------------------
Q 018348 247 ETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSL-------------------------------- 291 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~---~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~-------------------------------- 291 (357)
.+-.++-+|..++..+ ++.+|+..|++||+++|+ .+.+|..++.
T Consensus 195 ~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~-~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~ 273 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPE-FTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPEL 273 (372)
T ss_dssp GGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccC
Confidence 4556667777777654 458899999999999998 6665554333
Q ss_pred ------------HHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 292 ------------CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 292 ------------~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
.+...|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|++|+.++|...
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 344479999999999999999975 67888999999999999999999999999999764
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=1.1e-08 Score=95.26 Aligned_cols=101 Identities=12% Similarity=-0.010 Sum_probs=85.4
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc-----CCCc--chHHHhhHHHHHHhcCChHHHHHHHHHHHHhC-----
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS----- 313 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~----- 313 (357)
..++...+....+..+|+|++|+..|++++++ .|++ -...+.++|.+|..+|++++|+..+++++++.
T Consensus 285 ~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg 364 (429)
T 3qwp_A 285 KEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFP 364 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcC
Confidence 44556667777888999999999999999975 3331 34679999999999999999999999999753
Q ss_pred CC---chHHHHHHHHHHHHcCChHHHHHHHHHhhcc
Q 018348 314 PI---WHIASYLQAAALSAMGMENEAQVALKEGTTL 346 (357)
Q Consensus 314 p~---~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 346 (357)
|+ -...++++|.+|..+|+|++|+..|++|+++
T Consensus 365 ~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 365 GSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 44 4457999999999999999999999999986
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.81 E-value=4.5e-08 Score=76.18 Aligned_cols=90 Identities=11% Similarity=-0.067 Sum_probs=83.8
Q ss_pred HHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHh----cCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 018348 254 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 329 (357)
Q Consensus 254 ~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 329 (357)
.|..+...+.+++|+..|++|.+. . ++.+.+++|.+|.. .+++++|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 888999999999999999999997 4 67899999999999 89999999999999987 789999999999999
Q ss_pred ----cCChHHHHHHHHHhhcccc
Q 018348 330 ----MGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 330 ----~g~~~~A~~~~~~al~l~~ 348 (357)
.+++++|+.+|++|.+...
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCHHHHHHHHHHHHHCCC
Confidence 9999999999999998754
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.80 E-value=1.5e-08 Score=97.12 Aligned_cols=106 Identities=10% Similarity=-0.026 Sum_probs=58.0
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcch-HHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP-TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~-~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
+....+...|..+.+.|++++|+..|+++++++|. ++ .+|.+.+.++.+.|++++|.+.|++|++..|.....|+..|
T Consensus 319 ~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a 397 (530)
T 2ooe_A 319 KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAA 397 (530)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCcccc-CchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHH
Confidence 34555666666666677777777777777777666 43 45666655555555555555555555555444444444333
Q ss_pred HH-HHHcCChHHHHHHHHHhhcccccccc
Q 018348 325 AA-LSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 325 ~~-~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
.+ +..+|++++|+..|++|++++|++..
T Consensus 398 ~~~~~~~~~~~~A~~~~e~al~~~p~~~~ 426 (530)
T 2ooe_A 398 LMEYYCSKDKSVAFKIFELGLKKYGDIPE 426 (530)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCChhHHHHHHHHHHHHCCCCHH
Confidence 32 22345555555555555555554443
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.79 E-value=2.3e-08 Score=95.83 Aligned_cols=105 Identities=8% Similarity=-0.094 Sum_probs=96.8
Q ss_pred hHhhHHHHHHHhHHHh-------ccCHH-------HHHHHHHHHhh-cCCCcchHHHhhHHHHHHhcCChHHHHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFR-------QKDLK-------DAIECYTQFID-AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA 309 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~-------~~~~~-------~Ai~~~~~ai~-~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 309 (357)
...+..|...|..+.+ .|+++ +|+..|++|++ ..|+ +..+|.++|.++...|++++|...|+++
T Consensus 269 p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~a 347 (530)
T 2ooe_A 269 GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRL 347 (530)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3567888899998886 79987 99999999998 8999 8999999999999999999999999999
Q ss_pred HHhCCCch-HHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 310 QIISPIWH-IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 310 l~l~p~~~-~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
++++|.++ .+|..+|.++..+|++++|++.|++|++..|..
T Consensus 348 l~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~ 389 (530)
T 2ooe_A 348 LAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 389 (530)
T ss_dssp HHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred hCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc
Confidence 99999985 699999999999999999999999999988764
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1.8e-08 Score=76.36 Aligned_cols=85 Identities=15% Similarity=0.092 Sum_probs=76.5
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc-------hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-------PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 318 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~ 318 (357)
..+..+...|..++..|+|++|+..|++++++.|+ + ..+++++|.+|..+|++++|+..++++++++| +..
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~ 113 (131)
T 1elr_A 36 TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPD 113 (131)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHH
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHH
Confidence 45677889999999999999999999999999887 5 78999999999999999999999999999999 688
Q ss_pred HHHHHHHHHHHcCC
Q 018348 319 ASYLQAAALSAMGM 332 (357)
Q Consensus 319 a~~~~g~~~~~~g~ 332 (357)
.+..++.++..+++
T Consensus 114 ~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 114 VLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888766554
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.73 E-value=3e-08 Score=90.21 Aligned_cols=101 Identities=14% Similarity=0.022 Sum_probs=88.3
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcC--------CCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc----
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAG--------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 316 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~--------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 316 (357)
..+...|..++..|+|++|+..|++++++. |. ...++.++|.++...|++++|...+++++.+.+..
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 172 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ 172 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH
Confidence 336788999999999999999999999875 33 45678889999999999999999999999999863
Q ss_pred -hHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 317 -HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 317 -~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
..+++.+|.++..+|++++|...+++++++.+..
T Consensus 173 ~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~ 207 (373)
T 1hz4_A 173 QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 207 (373)
T ss_dssp GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 4678999999999999999999999999986654
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.72 E-value=2.4e-08 Score=86.80 Aligned_cols=95 Identities=17% Similarity=0.120 Sum_probs=83.9
Q ss_pred HHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc--hHHHHHHHHHHH
Q 018348 251 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQAAALS 328 (357)
Q Consensus 251 ~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~ 328 (357)
....+..+...|+|++|.+.|+.++..+|. .. ..+.+|.++.+.+++++|+..++.++...+.. ..+++++|.++.
T Consensus 105 ~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~ 182 (282)
T 4f3v_A 105 TMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA 182 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH
Confidence 345678899999999999999999999998 66 88899999999999999999999888864332 458999999999
Q ss_pred HcCChHHHHHHHHHhhccc
Q 018348 329 AMGMENEAQVALKEGTTLE 347 (357)
Q Consensus 329 ~~g~~~~A~~~~~~al~l~ 347 (357)
.+|++++|+.+|++++.-.
T Consensus 183 ~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 183 NLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HTTCHHHHHHHHHHHHTST
T ss_pred HCCCHHHHHHHHHHHhcCC
Confidence 9999999999999998543
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.71 E-value=8.1e-08 Score=87.35 Aligned_cols=97 Identities=15% Similarity=0.154 Sum_probs=44.2
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhc--------CCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhC-------
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------- 313 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~------- 313 (357)
..+...|..++..|++++|+..|++++++ .-- .++.++|.++...|++++|+..+++++++.
T Consensus 54 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~ 130 (373)
T 1hz4_A 54 VATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYAL---WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ 130 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhcccc
Confidence 33444444455555555555555544431 111 223344444555555555555555554443
Q ss_pred -CCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccc
Q 018348 314 -PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 314 -p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
|....++.++|.++..+|++++|...+++++++.+
T Consensus 131 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 131 LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLS 166 (373)
T ss_dssp STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 22233444445555555555555555555544443
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.65 E-value=8.1e-08 Score=70.81 Aligned_cols=71 Identities=10% Similarity=-0.197 Sum_probs=64.0
Q ss_pred hHHHhhHHHHHHhcCChHHHHHHHHHHHHhC-------CCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 283 PTVYARRSLCYLMSDMPQDALNDAMQAQIIS-------PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 283 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~-------p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
+.-.+.+|..++..|+|..|+..+++|++.. +..+..+.++|.+++++|++++|+..+++|++++|++..+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 4556789999999999999999999999864 3567889999999999999999999999999999998765
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.64 E-value=5.3e-08 Score=92.03 Aligned_cols=105 Identities=9% Similarity=-0.042 Sum_probs=89.1
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc-----CCCc--chHHHhhHHHHHHhcCChHHHHHHHHHHHHhC-----
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS----- 313 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~----- 313 (357)
..+..+.+.|.+|..+|+|++|+..|++++++ .|++ .+..++|+|.+|..+|++++|+..+++|+++.
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 67788899999999999999999999999975 3331 45689999999999999999999999999753
Q ss_pred CCc---hHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 314 PIW---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 314 p~~---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
|+. .+...+++.++.++++|++|...|+++.+-.-++
T Consensus 429 ~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~ 468 (490)
T 3n71_A 429 PSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNN 468 (490)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 444 4567788999999999999999999987644333
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.2e-07 Score=89.83 Aligned_cols=99 Identities=13% Similarity=0.000 Sum_probs=84.9
Q ss_pred HhhHHHHHHHhHHHhcc---CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHh----cCChHHHHHHHHHHHHhCCCchH
Q 018348 246 QETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHI 318 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~---~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~~ 318 (357)
....+++..|..++..| ++++|+..|++|++. . ++.+++++|.+|.. .+++++|+..|++|++.. ++.
T Consensus 326 ~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~ 400 (490)
T 2xm6_A 326 GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSA 400 (490)
T ss_dssp TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHH
T ss_pred CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHH
Confidence 45567788888888765 889999999999987 4 57888999999998 899999999999998864 688
Q ss_pred HHHHHHHHHHH----cCChHHHHHHHHHhhccccc
Q 018348 319 ASYLQAAALSA----MGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 319 a~~~~g~~~~~----~g~~~~A~~~~~~al~l~~~ 349 (357)
+++++|.+|.. .+++++|+.+|++|++.+|+
T Consensus 401 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 401 AQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 99999999998 89999999999999999843
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.4e-07 Score=81.41 Aligned_cols=88 Identities=11% Similarity=0.024 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHHhhcCCCc-chHHHhhHHHHHHhc-----CChHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHH-cCChH
Q 018348 263 DLKDAIECYTQFIDAGTMV-SPTVYARRSLCYLMS-----DMPQDALNDAMQAQIISPIW-HIASYLQAAALSA-MGMEN 334 (357)
Q Consensus 263 ~~~~Ai~~~~~ai~~~p~~-~~~~~~~~a~~~~~~-----~~~~~A~~~~~~al~l~p~~-~~a~~~~g~~~~~-~g~~~ 334 (357)
...+|...+++||+++|+. +..+|.-+|..|... |+.++|.++|++|++++|+. ..+++..|..++. +|+++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 3578999999999999993 345899999999995 99999999999999999975 9999999999988 59999
Q ss_pred HHHHHHHHhhcccccc
Q 018348 335 EAQVALKEGTTLEAKK 350 (357)
Q Consensus 335 ~A~~~~~~al~l~~~~ 350 (357)
+|.+.+++|+..+|..
T Consensus 258 ~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 258 GFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999999999984
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=98.59 E-value=3.6e-08 Score=89.73 Aligned_cols=49 Identities=20% Similarity=0.279 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC----------CeEEecCCCcccc
Q 018348 23 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----------NPRLSTFGLMKNS 72 (357)
Q Consensus 23 ~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~----------~~kl~dfg~~~~~ 72 (357)
...++.|++.+|.+||..+ +|||||||.|||++.+| .+.|+||+.+...
T Consensus 207 ~~~l~~qll~~l~~lH~~g-IVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 207 PASLYADLIALILRLAKHG-LIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 4578899999999999999 99999999999998776 3889999987654
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.58 E-value=2e-07 Score=87.55 Aligned_cols=96 Identities=9% Similarity=0.024 Sum_probs=69.2
Q ss_pred hHHHHHHHhHHHhcc---CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhc----CChHHHHHHHHHHHHhCCCchHHH
Q 018348 248 TLNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS----DMPQDALNDAMQAQIISPIWHIAS 320 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~---~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~----~~~~~A~~~~~~al~l~p~~~~a~ 320 (357)
..+++..|..+...| ++++|+..|+++++.++. .+..++++|.+|... +++++|+..|+++. |+++.++
T Consensus 176 ~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~ 251 (452)
T 3e4b_A 176 DICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASW 251 (452)
T ss_dssp TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHH
T ss_pred HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 346677777777777 777777777777777777 666667777777665 57777777777776 7777777
Q ss_pred HHHHHH-H--HHcCChHHHHHHHHHhhccc
Q 018348 321 YLQAAA-L--SAMGMENEAQVALKEGTTLE 347 (357)
Q Consensus 321 ~~~g~~-~--~~~g~~~~A~~~~~~al~l~ 347 (357)
+++|.+ + ...|++++|+.+|++|++.+
T Consensus 252 ~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 252 VSLAQLLYDFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHHHHHHSGGGCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHCC
Confidence 777777 3 46677777777777776543
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.56 E-value=2.3e-07 Score=69.80 Aligned_cols=91 Identities=12% Similarity=0.029 Sum_probs=78.3
Q ss_pred CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHH---HHHHHHHHHHhC-C-CchHHHHHHHHHHHHcCChHHHH
Q 018348 263 DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQD---ALNDAMQAQIIS-P-IWHIASYLQAAALSAMGMENEAQ 337 (357)
Q Consensus 263 ~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~---A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~g~~~~A~ 337 (357)
....+...|.+++..++. +...-++.|.++.+...... ++..++..++-+ | ...+..|.+|.+++++|+|++|+
T Consensus 16 ~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 346677778888887776 78899999999999887766 999999999887 6 67889999999999999999999
Q ss_pred HHHHHhhcccccccccc
Q 018348 338 VALKEGTTLEAKKNSTA 354 (357)
Q Consensus 338 ~~~~~al~l~~~~~~a~ 354 (357)
.+++..|+++|+|..|.
T Consensus 95 ~~~~~lL~~eP~n~QA~ 111 (126)
T 1nzn_A 95 KYVRGLLQTEPQNNQAK 111 (126)
T ss_dssp HHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHhCCCCHHHH
Confidence 99999999999997664
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.9e-07 Score=65.53 Aligned_cols=70 Identities=7% Similarity=-0.092 Sum_probs=63.7
Q ss_pred hhHHHHHHHhHHHhccC---HHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch
Q 018348 247 ETLNSKKKGDVAFRQKD---LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 317 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~---~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 317 (357)
+++.+...|.+++..++ .++|...+++|++++|+ +..+.+.+|..+++.|+|++|+..++++++.+|..+
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 46778888999976665 79999999999999999 999999999999999999999999999999999843
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.2e-06 Score=82.99 Aligned_cols=97 Identities=10% Similarity=-0.114 Sum_probs=86.4
Q ss_pred HhhHHHHHHHhHHHh----ccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHh----cCChHHHHHHHHHHHHhCCCch
Q 018348 246 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWH 317 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~ 317 (357)
..+.+++..|..++. .+++++|+..|++|++. . ++.+++++|.+|.. .+++++|+..|++|++. +++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--G-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 567888999999999 99999999999999886 3 56888899999998 88999999999999876 578
Q ss_pred HHHHHHHHHHHH----cCChHHHHHHHHHhhccc
Q 018348 318 IASYLQAAALSA----MGMENEAQVALKEGTTLE 347 (357)
Q Consensus 318 ~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~ 347 (357)
.+++++|.+|.. .+++++|+.+|+++++.+
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 999999999998 899999999999998763
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.7e-06 Score=81.15 Aligned_cols=105 Identities=10% Similarity=-0.070 Sum_probs=85.0
Q ss_pred hhhhhhhhhhhhHhhHHHHHHHhH-H--HhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcC-----ChHHHHHH
Q 018348 234 NELSFQMWTDQMQETLNSKKKGDV-A--FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-----MPQDALND 305 (357)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-----~~~~A~~~ 305 (357)
+..+|+... ...+.+++..|.. + ...+++++|+..|++|++.+ ++.+++++|.+|. .| ++++|+.+
T Consensus 236 A~~~~~~aa--~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~ 309 (452)
T 3e4b_A 236 AQALLEKIA--PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAH 309 (452)
T ss_dssp HHHHHHHHG--GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHH
T ss_pred HHHHHHHHc--CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHH
Confidence 344455444 6777888888888 4 57889999999999998654 5688889999998 45 89999999
Q ss_pred HHHHHHhCCCchHHHHHHHHHHHH----cCChHHHHHHHHHhhccc
Q 018348 306 AMQAQIISPIWHIASYLQAAALSA----MGMENEAQVALKEGTTLE 347 (357)
Q Consensus 306 ~~~al~l~p~~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~ 347 (357)
|++|. +.++.+++++|.+|.. ..++++|+.+|++|.+.+
T Consensus 310 ~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 310 FEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 99998 8899999999988877 448999999999998753
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.43 E-value=7.6e-07 Score=69.13 Aligned_cols=79 Identities=18% Similarity=0.030 Sum_probs=71.4
Q ss_pred ccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHH----cCChHHH
Q 018348 261 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MGMENEA 336 (357)
Q Consensus 261 ~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~g~~~~A 336 (357)
.+++++|+..|+++.+.... .+. +|.+|...+..++|++.|++|.+. .++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-THH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 35789999999999998755 333 899999999999999999999998 789999999999999 9999999
Q ss_pred HHHHHHhhcc
Q 018348 337 QVALKEGTTL 346 (357)
Q Consensus 337 ~~~~~~al~l 346 (357)
+.+|++|.+.
T Consensus 81 ~~~~~~Aa~~ 90 (138)
T 1klx_A 81 AQYYSKACGL 90 (138)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999999876
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.42 E-value=9e-07 Score=69.02 Aligned_cols=82 Identities=12% Similarity=-0.012 Sum_probs=72.5
Q ss_pred HhhHHHHHHHhHHHhcc---CHHHHHHHHHHHhhcC-CCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHH
Q 018348 246 QETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAG-TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 321 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~---~~~~Ai~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 321 (357)
...+..++.|..+.+.+ +++++|..++..++.+ |....++++++|.+|+++|+|++|.++++++++++|++.+|..
T Consensus 30 ~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~ 109 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKE 109 (152)
T ss_dssp CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 46678899999999988 8889999999999999 7326789999999999999999999999999999999999977
Q ss_pred HHHHHH
Q 018348 322 LQAAAL 327 (357)
Q Consensus 322 ~~g~~~ 327 (357)
-+-.+-
T Consensus 110 Lk~~ie 115 (152)
T 1pc2_A 110 LERLID 115 (152)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.41 E-value=8.6e-07 Score=91.35 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=34.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhC
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS 313 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~ 313 (357)
.....|.+.|.++...|+|++|+.+|.+| + ++..|.+.|.++.+.|++++|++++..|++.+
T Consensus 1103 n~p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~~ 1164 (1630)
T 1xi4_A 1103 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKKA 1164 (1630)
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc
Confidence 44444555566666666666666665554 3 45555555555555555555555555544433
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.5e-06 Score=80.13 Aligned_cols=101 Identities=9% Similarity=-0.036 Sum_probs=81.2
Q ss_pred hhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHH
Q 018348 242 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 321 (357)
Q Consensus 242 ~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 321 (357)
......+..|...|..+.+.|+|++|++.|.+| + ++..|...+.++...|+++.|..+... |..+|+. ..
T Consensus 142 ~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~ 211 (449)
T 1b89_A 142 KLLYNNVSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LE 211 (449)
T ss_dssp HHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HH
T ss_pred HHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HH
Confidence 344456678889999999999999999999999 4 577888888888888999999776664 4465555 33
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 322 LQAAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 322 ~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
.+...|...|++++|+..|++++.+|+.+..
T Consensus 212 ~lv~~Yek~G~~eEai~lLe~aL~le~ah~~ 242 (449)
T 1b89_A 212 ELINYYQDRGYFEELITMLEAALGLERAHMG 242 (449)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSTTCCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHhCCcHHHHH
Confidence 5778899999999999999999999976643
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-05 Score=74.41 Aligned_cols=100 Identities=10% Similarity=0.008 Sum_probs=77.5
Q ss_pred HHHHhHHHhccCHHHHHHHHHHHhhcCCC-----cchHHHhhHHHHHHhcCChHHHHHHHHHHHHh------CCCchHHH
Q 018348 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWHIAS 320 (357)
Q Consensus 252 ~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p~~~~a~ 320 (357)
...|..+...|++++|+..|++++...+. ....++.++|.+|...|++++|+..+.+++.. .+....++
T Consensus 99 ~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~ 178 (434)
T 4b4t_Q 99 TLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVH 178 (434)
T ss_dssp HHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 33455556667777777777777654322 12567888999999999999999999998875 45557789
Q ss_pred HHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 321 YLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 321 ~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
...|.+|..+|+|++|...|++++++.+...
T Consensus 179 ~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~ 209 (434)
T 4b4t_Q 179 LLESKVYHKLRNLAKSKASLTAARTAANSIY 209 (434)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999998866543
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.21 E-value=9.9e-06 Score=71.29 Aligned_cols=101 Identities=10% Similarity=-0.105 Sum_probs=71.4
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCC--CcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCC------chHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT--MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI------WHIA 319 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~------~~~a 319 (357)
...+.-.|.++...|++++|+..+.+.|..+| . +.+++...+.+++++|+.+.|.+.+++..+.+|+ ..-.
T Consensus 100 ~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~ 178 (310)
T 3mv2_B 100 PYELYLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMIL 178 (310)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHH
Confidence 34456778888888888888888888888776 5 6777777888888888888888888888888773 2222
Q ss_pred HHHHHHHHHHcC--ChHHHHHHHHHhhccccc
Q 018348 320 SYLQAAALSAMG--MENEAQVALKEGTTLEAK 349 (357)
Q Consensus 320 ~~~~g~~~~~~g--~~~~A~~~~~~al~l~~~ 349 (357)
++.-|.+....| ++++|...|+++.+..|+
T Consensus 179 ~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 179 NLAESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 333344455555 788888888877666554
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.19 E-value=7.2e-06 Score=72.18 Aligned_cols=96 Identities=7% Similarity=-0.096 Sum_probs=80.5
Q ss_pred HHHHHHhHHHhcc--CHHHHHHHHHHHhhcCCCcch--HHHhhHHHHHHhcCChHHHHHHHHHHHHh----------CCC
Q 018348 250 NSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSP--TVYARRSLCYLMSDMPQDALNDAMQAQII----------SPI 315 (357)
Q Consensus 250 ~~~~~g~~~~~~~--~~~~Ai~~~~~ai~~~p~~~~--~~~~~~a~~~~~~~~~~~A~~~~~~al~l----------~p~ 315 (357)
.....|...+..| ++++|+..|+++.+..|+ .. ..+++ +++++|++++|.+.+++++++ +|+
T Consensus 178 ~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~-~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~ 253 (310)
T 3mv2_B 178 LNLAESYIKFATNKETATSNFYYYEELSQTFPT-WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLY 253 (310)
T ss_dssp HHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS-HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSS
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC-cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCC
Confidence 3344455566666 999999999999888885 22 33444 899999999999999988887 588
Q ss_pred chHHHHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 316 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 316 ~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
++.++.++..+.+.+|+ +|.+.++++.+++|+++
T Consensus 254 ~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 254 KPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp HHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred CHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 99999999999999998 99999999999999986
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.7e-06 Score=78.71 Aligned_cols=102 Identities=8% Similarity=0.024 Sum_probs=73.3
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc----------------hHHHhhHHHHHHhcCChHHHHHHHHHHHHh
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----------------PTVYARRSLCYLMSDMPQDALNDAMQAQII 312 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~----------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~l 312 (357)
.+..++|..+.+.|+|++|++.|.++++..+... ..++.++|.+|...|++++|++.+.+++.+
T Consensus 5 ~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~ 84 (434)
T 4b4t_Q 5 GSKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEY 84 (434)
T ss_dssp THHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3455677788888888888888888888877621 124677888888888888888888888877
Q ss_pred CCCchHH------HHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 313 SPIWHIA------SYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 313 ~p~~~~a------~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
.+...++ ...+|.++...|++++|+..+++++++.++.
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 128 (434)
T 4b4t_Q 85 MMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE 128 (434)
T ss_dssp HHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 6654443 3445666667777777777777777665543
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.17 E-value=4.8e-06 Score=85.91 Aligned_cols=63 Identities=16% Similarity=0.111 Sum_probs=59.2
Q ss_pred chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccc
Q 018348 282 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 282 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 349 (357)
.+.+|+++|.++...|++++|+..|.+| +++.+|++.|.++.++|+|++|+++|..|.+.++.
T Consensus 1104 ~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1104 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 6789999999999999999999999887 88999999999999999999999999999988744
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.2e-05 Score=63.02 Aligned_cols=93 Identities=9% Similarity=-0.011 Sum_probs=76.3
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcch---------HHHhhHHHHHHhcCChHHHHHHHHHHHHhCC---C-
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---------TVYARRSLCYLMSDMPQDALNDAMQAQIISP---I- 315 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~---------~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p---~- 315 (357)
-.+++....++..|.|+.|+-..+.++.+..+ ++ .++..+|.+++..++|..|...|++||++.- +
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~-~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNN-NPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcC-CcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 45677888899999999999999998776433 22 3778889999999999999999999986431 1
Q ss_pred ---------------------chHHHHHHHHHHHHcCChHHHHHHHHH
Q 018348 316 ---------------------WHIASYLQAAALSAMGMENEAQVALKE 342 (357)
Q Consensus 316 ---------------------~~~a~~~~g~~~~~~g~~~~A~~~~~~ 342 (357)
..+..|.++.||.++|++++|+..++.
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 126789999999999999999999875
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.99 E-value=3.3e-05 Score=63.67 Aligned_cols=139 Identities=12% Similarity=0.034 Sum_probs=88.4
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT-SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~gt 81 (357)
.-||.+.|.. .+.+++++++|.++.|.+..|.-+- ... -..+=+.|..|++..+|.|.+.+ +... ...
T Consensus 32 ~vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~~~ 100 (229)
T 2yle_A 32 ALSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AADD--------AGE 100 (229)
T ss_dssp EEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-cccc--------ccc
Confidence 4478998853 5789999999999999999887662 111 11223457889999999887654 2110 112
Q ss_pred CCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhhhc
Q 018348 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 161 (357)
Q Consensus 82 ~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 161 (357)
..+.+||... ...+.+.=|||||+++|..+.-..+.. .+...++.|..||..|...
T Consensus 101 ~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~-----------------------eE~eLS~~LE~LL~~Mt~~ 156 (229)
T 2yle_A 101 PPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN-----------------------EERELSPPLEQLIDHMANT 156 (229)
T ss_dssp ------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT-----------------------EEECCCHHHHHHHHHHTTC
T ss_pred cCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc-----------------------cchhhCHHHHHHHHHHHhc
Confidence 3466888764 344567789999999999886543321 1223346788899888765
Q ss_pred -------------------------CCCCCCChhhHHHHh
Q 018348 162 -------------------------EPRERPNPKSLVTAL 176 (357)
Q Consensus 162 -------------------------~p~~Rps~~~i~~~L 176 (357)
.+..|+++++|++.=
T Consensus 157 ~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C 196 (229)
T 2yle_A 157 VEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLC 196 (229)
T ss_dssp CC--------------------CCSCCCCCCSHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCcCCHHHHHHHH
Confidence 245777888777643
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.97 E-value=3.3e-05 Score=58.16 Aligned_cols=72 Identities=7% Similarity=-0.101 Sum_probs=49.5
Q ss_pred chHHHhhHHHHHHhcCC---hHHHHHHHHHHHHhCC-CchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 282 SPTVYARRSLCYLMSDM---PQDALNDAMQAQIISP-IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 282 ~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
....-++.|.++.+... ..+++..++..++.+| ...+.+|.+|++++++|+|++|+++.+..|+++|+|..|
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA 114 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 114 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHH
Confidence 35666667777766544 3456777777777776 346677777777777777777777777777777777654
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.94 E-value=4.9e-05 Score=57.95 Aligned_cols=72 Identities=7% Similarity=-0.101 Sum_probs=51.8
Q ss_pred chHHHhhHHHHHHhcCC---hHHHHHHHHHHHHhCC-CchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 282 SPTVYARRSLCYLMSDM---PQDALNDAMQAQIISP-IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 282 ~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
+...-++.|.++.+... ..+++..++..++-+| ...+..|.+|.+++++|+|++|+++.+..|+++|+|..|
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA 113 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 113 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHH
Confidence 46667777777777654 3467777777777777 456677777888888888888888888888888877654
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.92 E-value=2.1e-05 Score=70.53 Aligned_cols=76 Identities=14% Similarity=0.103 Sum_probs=65.7
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
..+..+...|..++..|++++|+..+++|+.++|+ ...|..+|.++...|++++|++.|++|+.++|....-++..
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~ 350 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIE 350 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHHHh
Confidence 45566777788888899999999999999999976 67788899999999999999999999999999887544433
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=2.5e-05 Score=72.56 Aligned_cols=68 Identities=10% Similarity=0.040 Sum_probs=59.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc-----CCCc--chHHHhhHHHHHHhcCChHHHHHHHHHHHHhC
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS 313 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~ 313 (357)
..+..+.+.|.+|..+|+|++|+..|++++++ .|++ -+..++|+|.+|..+|++++|+..|++|+++.
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 67788899999999999999999999999975 3331 46689999999999999999999999999763
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.86 E-value=1.6e-05 Score=73.27 Aligned_cols=87 Identities=16% Similarity=0.032 Sum_probs=63.5
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 328 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 328 (357)
.++...|..++..|+|++|+..|+++ + .|.++|.|+.++|++++|++.+.+| ++++.|-..+.++.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a----~-----n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV----S-----NFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp --------------CTTTHHHHHHHT----T-----CHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh----h-----hHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHH
Confidence 48999999999999999999999987 2 3789999999999999999999999 57899999999999
Q ss_pred HcCChHHHHHHHHHhhcccccc
Q 018348 329 AMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 329 ~~g~~~~A~~~~~~al~l~~~~ 350 (357)
..|+++.|..+... +.+.|++
T Consensus 189 ~~~ef~lA~~~~l~-L~~~ad~ 209 (449)
T 1b89_A 189 DGKEFRLAQMCGLH-IVVHADE 209 (449)
T ss_dssp HTTCHHHHHHTTTT-TTTCHHH
T ss_pred HcCcHHHHHHHHHH-HHhCHhh
Confidence 99999999877664 4455543
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=2.8e-05 Score=72.17 Aligned_cols=85 Identities=12% Similarity=-0.067 Sum_probs=68.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc-----CCCc--chHHHhhHHHHHHhcCChHHHHHHHHHHHHh-----C
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQII-----S 313 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-----~ 313 (357)
..+..+.+.|.+|..+|+|++|+..|++++++ .|++ -...++|+|.+|..+|++++|+..+++|+++ -
T Consensus 327 ~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG 406 (429)
T 3qwp_A 327 YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHG 406 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC
Confidence 66778899999999999999999999999975 2331 4567999999999999999999999999975 3
Q ss_pred CCc---hHHHHHHHHHHHHc
Q 018348 314 PIW---HIASYLQAAALSAM 330 (357)
Q Consensus 314 p~~---~~a~~~~g~~~~~~ 330 (357)
|+. .+.+.+++.+...+
T Consensus 407 ~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 407 REHSLIEDLILLLEECDANI 426 (429)
T ss_dssp TTSHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHH
Confidence 444 44566677766554
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00012 Score=63.23 Aligned_cols=79 Identities=11% Similarity=-0.026 Sum_probs=62.7
Q ss_pred HHHHhh-cCCCcchHHHhhHHHHHHh---c--C------ChHHHHHHHHHHHHhCCC--chHHHHHHHHHHHHc-----C
Q 018348 271 YTQFID-AGTMVSPTVYARRSLCYLM---S--D------MPQDALNDAMQAQIISPI--WHIASYLQAAALSAM-----G 331 (357)
Q Consensus 271 ~~~ai~-~~p~~~~~~~~~~a~~~~~---~--~------~~~~A~~~~~~al~l~p~--~~~a~~~~g~~~~~~-----g 331 (357)
+.+++. .+|+ +.++++-.|..+.. . | ....|...+++|+++||+ +..+|..+|.+|... |
T Consensus 140 ~~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gG 218 (301)
T 3u64_A 140 LHKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG 218 (301)
T ss_dssp HHHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTC
T ss_pred HHHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCC
Confidence 344443 4666 67766666666544 1 2 357899999999999999 566999999999996 9
Q ss_pred ChHHHHHHHHHhhcccccc
Q 018348 332 MENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 332 ~~~~A~~~~~~al~l~~~~ 350 (357)
+.++|.++|++|++++|+.
T Consensus 219 d~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 219 GMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp CHHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999975
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=97.78 E-value=1.2e-05 Score=71.01 Aligned_cols=76 Identities=16% Similarity=0.158 Sum_probs=48.0
Q ss_pred ceecCCCCCCeeeCC--CCCeEEecCCCccccCCCCCccCCCCC---CchhhhcC-----CC---------CCCcccchh
Q 018348 43 ALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGKSYSTNLAF---TPPEYLRT-----GR---------VTPESVIYS 103 (357)
Q Consensus 43 ~~H~dlk~~Nill~~--~~~~kl~dfg~~~~~~~~~~~~gt~~y---~aPE~~~~-----~~---------~~~~~Di~s 103 (357)
++|+|++|.||+++. .+.+.|+||+.+....+.......... ..|+.... +. ...-.+.|+
T Consensus 193 ~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~ 272 (304)
T 3sg8_A 193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWS 272 (304)
T ss_dssp EECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred eEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHH
Confidence 699999999999987 456789999987654332111111111 23332211 11 111257899
Q ss_pred HHHHHHHHHcCCCCC
Q 018348 104 FGTLLLDLLSGKHIP 118 (357)
Q Consensus 104 lG~vl~el~~g~~~~ 118 (357)
+|.++|.+.+|..++
T Consensus 273 l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 273 FEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHcCCHHH
Confidence 999999999997543
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00022 Score=53.46 Aligned_cols=82 Identities=11% Similarity=-0.060 Sum_probs=69.9
Q ss_pred HhhHHHHHHHhHHHhccCHHH---HHHHHHHHhhcC-CCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKD---AIECYTQFIDAG-TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 321 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~---Ai~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 321 (357)
...+.-++.|..+...++..+ +|..++..++.+ |...-+..+.+|..++++|+|++|..+++..|+.+|++.+|.-
T Consensus 33 ~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~ 112 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKE 112 (126)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 456778889999998887777 999999999987 5325678888999999999999999999999999999999976
Q ss_pred HHHHHH
Q 018348 322 LQAAAL 327 (357)
Q Consensus 322 ~~g~~~ 327 (357)
-+..+-
T Consensus 113 Lk~~i~ 118 (126)
T 1nzn_A 113 LERLID 118 (126)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=6.5e-05 Score=64.72 Aligned_cols=27 Identities=15% Similarity=0.124 Sum_probs=23.2
Q ss_pred ceecCCCCCCeeeCCCCCeEEecCCCc
Q 018348 43 ALYHDLNAYRILFDEDGNPRLSTFGLM 69 (357)
Q Consensus 43 ~~H~dlk~~Nill~~~~~~kl~dfg~~ 69 (357)
++|+|++|.||+++.++.+.|+||+.+
T Consensus 185 l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 185 FSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp EECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred EECCCCCcCcEEEECCcEEEEEEchhc
Confidence 799999999999986655679999864
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0018 Score=48.71 Aligned_cols=82 Identities=5% Similarity=-0.172 Sum_probs=67.0
Q ss_pred hhHHHHHHHhHHHhcc---CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~---~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
..+.-++.|..+.+.. +..++|..++..++.+|...-+.++.+|..+.++|+|++|.++.+..++.+|++.+|.--+
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 3455677777777665 4467999999999988863567888899999999999999999999999999999997665
Q ss_pred HHHHH
Q 018348 324 AAALS 328 (357)
Q Consensus 324 g~~~~ 328 (357)
..+--
T Consensus 119 ~~Ie~ 123 (134)
T 3o48_A 119 SMVED 123 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0024 Score=48.63 Aligned_cols=82 Identities=5% Similarity=-0.174 Sum_probs=67.5
Q ss_pred HhhHHHHHHHhHHHhccC---HHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKD---LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 322 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~---~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 322 (357)
...+.-++.|..+.+..+ -.++|..++..++.+|...-+..+.+|..++++|+|++|.++++..|+.+|+|.+|.--
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 345666777888877664 45799999999998886466788889999999999999999999999999999998665
Q ss_pred HHHHH
Q 018348 323 QAAAL 327 (357)
Q Consensus 323 ~g~~~ 327 (357)
+..+-
T Consensus 117 k~~Ie 121 (144)
T 1y8m_A 117 KSMVE 121 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00024 Score=64.20 Aligned_cols=55 Identities=11% Similarity=0.064 Sum_probs=45.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------------------
Q 018348 17 PMKWAMRLRVVLHLAQALEYCTSK-------------------------------------------------------- 40 (357)
Q Consensus 17 ~l~~~~~~~i~~~i~~~l~~lH~~-------------------------------------------------------- 40 (357)
.++......++.++++.|..||..
T Consensus 135 ~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 214 (359)
T 3dxp_A 135 GMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDAD 214 (359)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCC
Confidence 467888889999999999999972
Q ss_pred -CCceecCCCCCCeeeCCCCC--eEEecCCCccc
Q 018348 41 -GRALYHDLNAYRILFDEDGN--PRLSTFGLMKN 71 (357)
Q Consensus 41 -~~~~H~dlk~~Nill~~~~~--~kl~dfg~~~~ 71 (357)
..++|+|+++.||+++.++. +.|+||+.+..
T Consensus 215 ~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 215 LTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 12899999999999987653 68999997643
|
| >2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0056 Score=55.89 Aligned_cols=101 Identities=9% Similarity=-0.038 Sum_probs=82.2
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc-------c--------------hHHHhhHHHHHHhcCChHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-------S--------------PTVYARRSLCYLMSDMPQDAL 303 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~-------~--------------~~~~~~~a~~~~~~~~~~~A~ 303 (357)
....+.+...|......|+.++|+..+++|+.+-... . ..+...++.+++..|++.+|+
T Consensus 112 ~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~ 191 (388)
T 2ff4_A 112 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 191 (388)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 3455666777777888899999999999999874320 0 012334567778899999999
Q ss_pred HHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhc
Q 018348 304 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 345 (357)
Q Consensus 304 ~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 345 (357)
..+.+++..+|-+-.+|..+-.+|+..|+..+|++.|+++-+
T Consensus 192 ~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 192 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998643
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0023 Score=62.82 Aligned_cols=99 Identities=7% Similarity=-0.086 Sum_probs=79.9
Q ss_pred HHHHHHhHHHhccCHHHHHHHHHHHhhc-CCCcchHHHhhHHHHHHhcC-ChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 250 NSKKKGDVAFRQKDLKDAIECYTQFIDA-GTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 250 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~~-~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
.|...+....+.|+.+.|...|.+|++. .+. ...+|...|..-...+ +.+.|.+.|+++++..|+++..|...+...
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~-~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe 514 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLKKLV-TPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFL 514 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGS-CTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHH
Confidence 4666666677788899999999999987 444 4667776666665654 488999999999999999988888888888
Q ss_pred HHcCChHHHHHHHHHhhccccc
Q 018348 328 SAMGMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 328 ~~~g~~~~A~~~~~~al~l~~~ 349 (357)
...|+.+.|...|++|++..|.
T Consensus 515 ~~~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 515 IYVNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp HHHTCHHHHHHHHHHHTTTSSS
T ss_pred HhCCCHHHHHHHHHHHHHhcCC
Confidence 8899999999999999988773
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.002 Score=63.21 Aligned_cols=82 Identities=7% Similarity=-0.023 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHH-HHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHH
Q 018348 264 LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL-NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 342 (357)
Q Consensus 264 ~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~-~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~ 342 (357)
.+.....|++||...|. .+.+|+..|..+...|+.++|. +.|++|+...|.+...|+..+......|++++|.+.|++
T Consensus 325 ~~Rv~~~Ye~aL~~~p~-~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek 403 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCF-APEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILS 403 (679)
T ss_dssp HHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 34567889999999999 8999999999999999999997 999999999999999999999999999999999999999
Q ss_pred hhcc
Q 018348 343 GTTL 346 (357)
Q Consensus 343 al~l 346 (357)
+++.
T Consensus 404 ~l~~ 407 (679)
T 4e6h_A 404 CIDR 407 (679)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
|
| >4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.011 Score=45.49 Aligned_cols=86 Identities=16% Similarity=0.040 Sum_probs=71.7
Q ss_pred HHHHHHHHHHhhcCCCcc-------hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHH
Q 018348 265 KDAIECYTQFIDAGTMVS-------PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQ 337 (357)
Q Consensus 265 ~~Ai~~~~~ai~~~p~~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~ 337 (357)
++-++.|++|+..-|-.. .-+|.+.|.. ...++.++|-..|+.++.+...+++.|...|..-..+|+...|.
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kAR 114 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSK 114 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHH
Confidence 788899999998776621 2345554433 56699999999999999998899999999999999999999999
Q ss_pred HHHHHhhccccccc
Q 018348 338 VALKEGTTLEAKKN 351 (357)
Q Consensus 338 ~~~~~al~l~~~~~ 351 (357)
+.+.+|+.+.|+..
T Consensus 115 kILg~AiG~~~k~~ 128 (161)
T 4h7y_A 115 QLLQKAVERGAVPL 128 (161)
T ss_dssp HHHHHHHHTTCBCH
T ss_pred HHHHHHhccCCCcH
Confidence 99999999988654
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0054 Score=48.07 Aligned_cols=81 Identities=17% Similarity=0.112 Sum_probs=61.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCC---Cc---------------------chHHHhhHHHHHHhcCChHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT---MV---------------------SPTVYARRSLCYLMSDMPQD 301 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p---~~---------------------~~~~~~~~a~~~~~~~~~~~ 301 (357)
..++.+.-.|+++|.+|+|..|...|++||.... .+ +.++.+.+|.||.+++++++
T Consensus 61 ~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 61 QKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKD 140 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHH
Confidence 5677889999999999999999999999975421 10 12678899999999999999
Q ss_pred HHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 302 ALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 302 A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
|+..++. |-..-..++....+|..|
T Consensus 141 Ai~~Le~-Ip~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 141 AIAILDG-IPSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHT-SCGGGCCHHHHHHHHHHC
T ss_pred HHHHHhc-CCchhcCHHHHHHHHHHh
Confidence 9997654 223335566666666654
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00065 Score=58.01 Aligned_cols=28 Identities=11% Similarity=0.054 Sum_probs=24.4
Q ss_pred ceecCCCCCCeeeCCCCCeEEecCCCcc
Q 018348 43 ALYHDLNAYRILFDEDGNPRLSTFGLMK 70 (357)
Q Consensus 43 ~~H~dlk~~Nill~~~~~~kl~dfg~~~ 70 (357)
++|+|++|.||+++.++.+.|+||+.+.
T Consensus 186 l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 186 VTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred EECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 8999999999999877666799999754
|
| >4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0089 Score=58.86 Aligned_cols=54 Identities=13% Similarity=-0.109 Sum_probs=50.0
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHh
Q 018348 290 SLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 343 (357)
Q Consensus 290 a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 343 (357)
+..++..|+++-|++..++|+.+.|.....|+.++.+|..+|+|+.|+-.++-+
T Consensus 344 a~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 344 TNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 555666799999999999999999999999999999999999999999998876
|
| >1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.069 Score=45.34 Aligned_cols=96 Identities=13% Similarity=0.027 Sum_probs=77.4
Q ss_pred HhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHH--H-----------
Q 018348 255 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS--Y----------- 321 (357)
Q Consensus 255 g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~--~----------- 321 (357)
...+++.|+.++|++.....|+.+|. ++.....+-..+.-.|+++.|.+.++.+.+++|.....- |
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~-da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R~ 82 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARK 82 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHHH
Confidence 34678899999999999999999999 888888888888999999999999999999999875532 1
Q ss_pred ----------------------HHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 322 ----------------------LQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 322 ----------------------~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
..+......|+.++|.+.-.+|++.-|...
T Consensus 83 ~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~~ 134 (273)
T 1zbp_A 83 DFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKG 134 (273)
T ss_dssp HHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCC
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcccC
Confidence 113334456888888888888887766543
|
| >3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.068 Score=41.86 Aligned_cols=91 Identities=14% Similarity=-0.007 Sum_probs=69.2
Q ss_pred HHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHH--Hh---------------CC
Q 018348 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQ--II---------------SP 314 (357)
Q Consensus 252 ~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al--~l---------------~p 314 (357)
.-.+..++-.|+|..|+-.+ +.++. ....+..+.||.+++++..|+...+..+ +. ||
T Consensus 37 lL~~I~LyyngEY~R~Lf~L---~~lNT---~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~ 110 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHL---HKLNT---CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDP 110 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHH---HTCCB---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCT
T ss_pred hhhhhhhhhcchHhHHHHHH---Hhcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeecc
Confidence 34578889999999887643 33332 3444446899999999999999999998 22 35
Q ss_pred CchHHH-HHHHHHHHHcCChHHHHHHHHHhhcccc
Q 018348 315 IWHIAS-YLQAAALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 315 ~~~~a~-~~~g~~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
.+-+-+ ..+|.++-+.|+-+||+..|.+....++
T Consensus 111 ~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 111 GDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp TCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred chHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCcc
Confidence 555554 4459999999999999999998877665
|
| >1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=95.87 E-value=0.042 Score=51.53 Aligned_cols=79 Identities=14% Similarity=0.010 Sum_probs=72.5
Q ss_pred HHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 018348 250 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 329 (357)
Q Consensus 250 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 329 (357)
-+...|........+..|...|.+|+.++|+ +...|+.+|.+....|+.-+|+-+|.+++-....++.|.-++...+..
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~-~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCC-CCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 4667888888889999999999999999999 899999999999999999999999999999888899999999887765
|
| >4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A | Back alignment and structure |
|---|
Probab=95.74 E-value=0.14 Score=48.17 Aligned_cols=97 Identities=7% Similarity=-0.081 Sum_probs=79.6
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhc--CCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCC-CchHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP-IWHIASYLQ 323 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~--~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p-~~~~a~~~~ 323 (357)
+...|...-..+.+.|++++|++.|++..+. .|+ ...|+.+-.+|.+.|+.++|.+.+++..+..- -+...|..+
T Consensus 104 d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd--~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~L 181 (501)
T 4g26_A 104 NEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR--LRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAAL 181 (501)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc--cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 4456677788899999999999999998765 455 67788888899999999999999998876431 244678888
Q ss_pred HHHHHHcCChHHHHHHHHHhhc
Q 018348 324 AAALSAMGMENEAQVALKEGTT 345 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~~~~al~ 345 (357)
-.++.+.|+.++|.+.|++.-+
T Consensus 182 i~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 182 LKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhhCCCHHHHHHHHHHHHH
Confidence 8999999999999999997543
|
| >2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B | Back alignment and structure |
|---|
Probab=95.57 E-value=0.087 Score=49.57 Aligned_cols=92 Identities=11% Similarity=0.060 Sum_probs=66.5
Q ss_pred HHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcC-ChHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 018348 250 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWHIASYLQAAALS 328 (357)
Q Consensus 250 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 328 (357)
.|..-+....+.++.+.|...|.+| ...+. ....|...|..-...+ +.+.|...|+.+++..|+.+..|...+....
T Consensus 288 lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~-~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~ 365 (493)
T 2uy1_A 288 LRINHLNYVLKKRGLELFRKLFIEL-GNEGV-GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLL 365 (493)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-TTSCC-CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-hCCCC-ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 3455555555677788888888888 43333 4566666565555445 5888888888888888888877777777778
Q ss_pred HcCChHHHHHHHHHh
Q 018348 329 AMGMENEAQVALKEG 343 (357)
Q Consensus 329 ~~g~~~~A~~~~~~a 343 (357)
.+|+.+.|...|+++
T Consensus 366 ~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 366 RIGDEENARALFKRL 380 (493)
T ss_dssp HHTCHHHHHHHHHHS
T ss_pred HcCCHHHHHHHHHHH
Confidence 888888888888876
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.02 Score=50.76 Aligned_cols=30 Identities=10% Similarity=0.087 Sum_probs=26.2
Q ss_pred CCCceecCCCCCCeeeCCCCCeEEecCCCcc
Q 018348 40 KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 70 (357)
Q Consensus 40 ~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~ 70 (357)
.. ++|+|+++.||+++.++.+.|+||+.+.
T Consensus 222 ~~-l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PN-LCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CC-EECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred Cc-eecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 45 9999999999999877889999999653
|
| >4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.033 Score=54.91 Aligned_cols=59 Identities=10% Similarity=0.021 Sum_probs=53.7
Q ss_pred HHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHH
Q 018348 250 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA 309 (357)
Q Consensus 250 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 309 (357)
-+..++..+..+|+|+-|+..-.+|+...|. +...|+.++.||..+|+|+.|+-.+.-.
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPs-eF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALD-SFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCch-hhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 4666788899999999999999999999999 8999999999999999999999776554
|
| >3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A | Back alignment and structure |
|---|
Probab=95.35 E-value=0.096 Score=47.52 Aligned_cols=92 Identities=11% Similarity=-0.091 Sum_probs=73.0
Q ss_pred HHHhHHHhccCHHHHHHHHHHHhhcCC-----CcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCC-----CchHH--H
Q 018348 253 KKGDVAFRQKDLKDAIECYTQFIDAGT-----MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP-----IWHIA--S 320 (357)
Q Consensus 253 ~~g~~~~~~~~~~~Ai~~~~~ai~~~p-----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p-----~~~~a--~ 320 (357)
+.|..++..|+|.+|+..+++.++.-. ..--+++..-..+|..++++.++...+.+|..... ....| .
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 679999999999999999999887421 12346778888999999999999999999876541 11233 4
Q ss_pred HHHHHHHH-HcCChHHHHHHHHHhh
Q 018348 321 YLQAAALS-AMGMENEAQVALKEGT 344 (357)
Q Consensus 321 ~~~g~~~~-~~g~~~~A~~~~~~al 344 (357)
..-|..++ ..++|.+|..+|-.++
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf 208 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAF 208 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHH
Confidence 44588999 8999999999999886
|
| >2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B | Back alignment and structure |
|---|
Probab=95.32 E-value=0.073 Score=50.08 Aligned_cols=102 Identities=6% Similarity=-0.202 Sum_probs=71.0
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHH----------------------------------
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC---------------------------------- 292 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~---------------------------------- 292 (357)
...-|...+..+...|+.+.|...|++|+.. |. +..++...+..
T Consensus 212 ~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~-~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw 289 (493)
T 2uy1_A 212 AEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SD-GMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLR 289 (493)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CC-SSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CC-cHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHH
Confidence 3556777888888899999999999999999 88 55444433222
Q ss_pred ------HHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcC-ChHHHHHHHHHhhccccccc
Q 018348 293 ------YLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMG-MENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 293 ------~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g-~~~~A~~~~~~al~l~~~~~ 351 (357)
..+.+..+.|...|++| +..+.....|...+...+..+ +.+.|...|++|++.-|++.
T Consensus 290 ~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~ 354 (493)
T 2uy1_A 290 INHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDST 354 (493)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCH
Confidence 12345677788888888 433334556666666666666 58888888888888766654
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=94.97 E-value=0.034 Score=48.81 Aligned_cols=29 Identities=17% Similarity=0.147 Sum_probs=23.9
Q ss_pred ceecCCCCCCeeeCC---CCC-eEEecCCCccc
Q 018348 43 ALYHDLNAYRILFDE---DGN-PRLSTFGLMKN 71 (357)
Q Consensus 43 ~~H~dlk~~Nill~~---~~~-~kl~dfg~~~~ 71 (357)
++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 192 ~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 192 LIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp EECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred eEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 699999999999987 455 47999997644
|
| >1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1 | Back alignment and structure |
|---|
Probab=94.82 E-value=0.057 Score=45.87 Aligned_cols=60 Identities=20% Similarity=-0.018 Sum_probs=56.1
Q ss_pred HHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 292 CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 292 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
-.++.|..++|++.....|+.+|.+.+....+-..++-.|+|+.|.+.++.+.+++|+..
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 456779999999999999999999999999999999999999999999999999999754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 357 | ||||
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-26 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-25 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-25 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 4e-25 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 4e-24 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 5e-24 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 7e-24 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-23 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-23 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-23 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 4e-22 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 7e-22 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 9e-22 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-21 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-21 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-21 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 5e-21 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 5e-21 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 9e-21 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-20 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-20 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 4e-20 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 6e-20 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 9e-20 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-19 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-19 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 5e-19 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-18 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 5e-18 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 5e-18 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 8e-18 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-17 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 3e-17 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-17 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-17 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-16 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-16 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 3e-16 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 4e-16 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 6e-16 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-15 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 4e-15 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 9e-15 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-14 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-14 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-14 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 1e-13 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 4e-13 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-12 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-12 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-12 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 7e-12 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 8e-12 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 1e-11 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-11 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 5e-11 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-10 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 4e-10 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-08 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 4e-08 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 9e-08 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 3e-07 | |
| d2fbna1 | 153 | a.118.8.1 (A:22-174) Putative 70 kda peptidylproly | 1e-04 | |
| d1p5qa1 | 170 | a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal d | 1e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-04 | |
| d1elra_ | 128 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 4e-04 | |
| d1hh8a_ | 192 | a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF- | 4e-04 | |
| d1kt1a1 | 168 | a.118.8.1 (A:254-421) FKBP51, C-terminal domain {M | 5e-04 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 5e-04 | |
| d1elwa_ | 117 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 0.001 |
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 103 bits (258), Expect = 4e-26
Identities = 38/194 (19%), Positives = 79/194 (40%), Gaps = 10/194 (5%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M L +L + + L + ++ A+EY K ++ DL A L E+
Sbjct: 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHL 153
Query: 61 PRLSTFGLMKNSRDGKSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
+++ FGL + + + +T PE L + + +S +++FG LL ++ +
Sbjct: 154 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 213
Query: 116 HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175
P +DL + L + + + ++ L C Q+ P +RP+ + A
Sbjct: 214 M-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 269
Query: 176 LSPLQKETEVPSHV 189
+ +E+ + V
Sbjct: 270 FETMFQESSISDEV 283
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (253), Expect = 2e-25
Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 19/195 (9%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+L HL ET + + + AQ ++Y +K ++ DL + I ED
Sbjct: 85 CEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSI-IHRDLKSNNIFLHEDLT 142
Query: 61 PRLSTFGL--MKNSRDGKSYSTNLAFTP----PEYLRT---GRVTPESVIYSFGTLLLDL 111
++ FGL +K+ G L+ + PE +R + +S +Y+FG +L +L
Sbjct: 143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
Query: 112 LSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167
++G+ +I + + R S + + RL + CL+ + ERP
Sbjct: 203 MTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRDERP 258
Query: 168 NPKSLVTALSPLQKE 182
++ ++ L +
Sbjct: 259 LFPQILASIELLARS 273
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (251), Expect = 3e-25
Identities = 42/193 (21%), Positives = 74/193 (38%), Gaps = 10/193 (5%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M +L L ++ + + +A + Y ++ DL A IL E+
Sbjct: 93 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLV 151
Query: 61 PRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
+++ FGL + D + + + +T PE GR T +S ++SFG LL +L +
Sbjct: 152 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 211
Query: 116 HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175
+P + +R + + + L L +C + EP ERP + L
Sbjct: 212 RVPYPG----MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 267
Query: 176 LSPLQKETEVPSH 188
L TE
Sbjct: 268 LEDYFTSTEPQYQ 280
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (249), Expect = 4e-25
Identities = 40/187 (21%), Positives = 71/187 (37%), Gaps = 16/187 (8%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M +L +L + L+ L + +A+EY ++ DL A +L ED
Sbjct: 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVSEDNV 141
Query: 61 PRLSTFGLMKN-SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP- 118
++S FGL K S + + +T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 142 AKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 201
Query: 119 ----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174
+ + D C + + C + RP+ L
Sbjct: 202 PRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMRPSFLQLRE 252
Query: 175 ALSPLQK 181
L ++
Sbjct: 253 QLEHIKT 259
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.4 bits (242), Expect = 4e-24
Identities = 33/186 (17%), Positives = 73/186 (39%), Gaps = 11/186 (5%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M + L+ + + L + L + + + Y ++ DL A L E+
Sbjct: 82 MEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQV 139
Query: 61 PRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
++S FG+ + D + S+ + + PE R + +S ++SFG L+ ++ S
Sbjct: 140 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 199
Query: 116 HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175
IP + + + + T + ++ + C + P +RP L+
Sbjct: 200 KIPYEN----RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255
Query: 176 LSPLQK 181
L+ + +
Sbjct: 256 LAEIAE 261
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.4 bits (242), Expect = 5e-24
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 20/194 (10%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M N +L L + L + +A+ + + + ++ DL A IL + +
Sbjct: 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDTLS 147
Query: 61 PRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
+++ FGL + D + + + +T PE + G T +S ++SFG LL ++++
Sbjct: 148 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 116 HIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 170
IP + + + D+C E EL +L C + P +RP
Sbjct: 208 RIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFD 258
Query: 171 SLVTALSPLQKETE 184
L + L TE
Sbjct: 259 YLRSVLEDFFTATE 272
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.7 bits (240), Expect = 7e-24
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 11/181 (6%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M N L +L H + L + + +A+EY SK L+ DL A L ++ G
Sbjct: 81 MANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVNDQGV 138
Query: 61 PRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
++S FGL + D + S+ + ++PPE L + + +S I++FG L+ ++ S
Sbjct: 139 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 198
Query: 116 HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175
+P + L ++ + C + ERP K L++
Sbjct: 199 KMPYER----FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254
Query: 176 L 176
+
Sbjct: 255 I 255
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.6 bits (240), Expect = 1e-23
Identities = 38/187 (20%), Positives = 65/187 (34%), Gaps = 23/187 (12%)
Query: 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH----DLNAYRIL 54
LA + E + LRV+ L AL+ C + + DL +
Sbjct: 87 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 146
Query: 55 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLD 110
D N +L FGL + S++ TP PE + +S I+S G LL +
Sbjct: 147 LDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 206
Query: 111 LLSGKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 166
L + IR+ + + + EL + +R L + R
Sbjct: 207 LCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD---------ELNEIITRMLNLKDYHR 257
Query: 167 PNPKSLV 173
P+ + ++
Sbjct: 258 PSVEEIL 264
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.8 bits (238), Expect = 2e-23
Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 11/175 (6%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
P T+ + L + LA AL YC SK ++ D+ +L G
Sbjct: 88 APLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGE 144
Query: 61 PRLSTFGLMKNSRDGKSYSTN--LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+++ FG ++ + + L + PPE + + ++S G L + L GK
Sbjct: 145 LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 204
Query: 119 PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
++ R + +E F D L SR L++ P +RP + ++
Sbjct: 205 EANTYQETYKRISR------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 253
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.2 bits (236), Expect = 4e-23
Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 24/200 (12%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
L K+L + +K + +V ++ ++Y ++ DL A +L
Sbjct: 89 AELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARNVLLVTQHY 145
Query: 61 PRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
++S FGL K R ++Y + + PE + + + +S ++SFG L+ + S
Sbjct: 146 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
Query: 114 GKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
P S ++ C E+ L + C Y+ RP
Sbjct: 206 YGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCWTYDVENRPG 256
Query: 169 PKSLVTALSPLQKETEVPSH 188
++ L + H
Sbjct: 257 FAAVELRLRNYYYDVVNEGH 276
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.6 bits (229), Expect = 4e-22
Identities = 37/195 (18%), Positives = 74/195 (37%), Gaps = 29/195 (14%)
Query: 1 MPNETLAKHLFHW--------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 52
M L +L P + +++ +A + Y + ++ DL A
Sbjct: 105 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF-VHRDLAARN 163
Query: 53 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGT 106
+ ED ++ FG+ ++ + Y + + PE L+ G T S ++SFG
Sbjct: 164 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 223
Query: 107 LLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 161
+L ++ + P L + + L D+C + L L C QY
Sbjct: 224 VLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------MLFELMRMCWQY 274
Query: 162 EPRERPNPKSLVTAL 176
P+ RP+ +++++
Sbjct: 275 NPKMRPSFLEIISSI 289
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 92.2 bits (228), Expect = 7e-22
Identities = 38/176 (21%), Positives = 73/176 (41%), Gaps = 21/176 (11%)
Query: 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 76
P+ A +L + +A + Y + + ++ DL L E+ +++ FGL +N
Sbjct: 136 PLSCAEQLCIARQVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 194
Query: 77 SYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDL 125
Y + + + PPE + R T ES ++++G +L ++ S P +
Sbjct: 195 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 254
Query: 126 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181
+RD N+ ++C EL L C P +RP+ S+ L + +
Sbjct: 255 VRDGNILACPENCPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 91.7 bits (227), Expect = 9e-22
Identities = 35/190 (18%), Positives = 74/190 (38%), Gaps = 15/190 (7%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M N +L + ++ +A ++Y ++ DL A IL + +
Sbjct: 109 MENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLV 166
Query: 61 PRLSTFGLMKNSRDGKSYSTN---------LAFTPPEYLRTGRVTPESVIYSFGTLLLDL 111
++S FGL + D S T + +T PE ++ + T S ++S+G ++ ++
Sbjct: 167 CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 226
Query: 112 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 171
+S P + ++++ + D + L +L C Q + RP
Sbjct: 227 MSYGERPYWD----MTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQ 282
Query: 172 LVTALSPLQK 181
+V L + +
Sbjct: 283 IVNTLDKMIR 292
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.8 bits (227), Expect = 1e-21
Identities = 28/190 (14%), Positives = 68/190 (35%), Gaps = 12/190 (6%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
MP L + + L + +A+ + Y + ++ DL A +L +
Sbjct: 92 MPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL-VHRDLAARNVLVKTPQH 149
Query: 61 PRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
+++ FGL K + + + E + T +S ++S+G + +L++
Sbjct: 150 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 209
Query: 115 KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174
P D I + + + ++ + +C + RP + L+
Sbjct: 210 GSKPY----DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 265
Query: 175 ALSPLQKETE 184
S + ++ +
Sbjct: 266 EFSKMARDPQ 275
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.4 bits (226), Expect = 2e-21
Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 12/172 (6%)
Query: 12 HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMK 70
+ + + + L +A+ +E+ K H DL A +L ++ FGL +
Sbjct: 155 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVVKICDFGLAR 212
Query: 71 NSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 124
+ +Y + + PE L G T +S ++S+G LL ++ S P
Sbjct: 213 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---G 269
Query: 125 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+ D N L + + E+ + C ++ R+RP+ +L + L
Sbjct: 270 IPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.0 bits (225), Expect = 2e-21
Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 20/193 (10%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M + L ++ ETH + L +A+ +++ SK ++ DL A + DE
Sbjct: 111 MKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF-VHRDLAARNCMLDEKFT 168
Query: 61 PRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 112
+++ FGL ++ D + S + + + E L+T + T +S ++SFG LL +L+
Sbjct: 169 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 228
Query: 113 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNP 169
+ P D N +T L+G+ + L + +C + RP+
Sbjct: 229 TRGAPPYP-------DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSF 281
Query: 170 KSLVTALSPLQKE 182
LV+ +S +
Sbjct: 282 SELVSRISAIFST 294
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.9 bits (222), Expect = 5e-21
Identities = 35/188 (18%), Positives = 75/188 (39%), Gaps = 14/188 (7%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+ A + + + L +A+ ++Y + K ++ DL A IL E+
Sbjct: 107 VLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYV 165
Query: 61 PRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 117
+++ FGL + + + + E L T S ++S+G LL +++S
Sbjct: 166 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 225
Query: 118 PPSHALDLIRDRNLQMLTDSCLEG---QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174
P L + +G + + E+ L +C + +P ERP+ ++
Sbjct: 226 PY-------CGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 278
Query: 175 ALSPLQKE 182
+L+ + +E
Sbjct: 279 SLNRMLEE 286
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.1 bits (223), Expect = 5e-21
Identities = 41/212 (19%), Positives = 75/212 (35%), Gaps = 42/212 (19%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M +L + L + + + +V + + + L Y K + ++ D+ IL + G
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 61 PRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-I 117
+L FG+ D + S ++ PE L+ + +S I+S G L+++ G++ I
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 118 PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---------------------------- 149
PP A +L Q+ D+ G
Sbjct: 204 PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPP 263
Query: 150 ---------ELVRLASRCLQYEPRERPNPKSL 172
E ++CL P ER + K L
Sbjct: 264 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.6 bits (219), Expect = 9e-21
Identities = 36/188 (19%), Positives = 65/188 (34%), Gaps = 23/188 (12%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
L K L + + ++ ++ ++Y K ++ DL A +L
Sbjct: 90 AGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNVLLVNRHY 147
Query: 61 PRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
++S FGL K SY T L + PE + + + S ++S+G + + LS
Sbjct: 148 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 207
Query: 114 GKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
P + I C EL L S C Y+ +RP+
Sbjct: 208 YGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWIYKWEDRPD 258
Query: 169 PKSLVTAL 176
++ +
Sbjct: 259 FLTVEQRM 266
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.7 bits (217), Expect = 1e-20
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 10/177 (5%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILF-DED 58
M + TL +L MK + + + L++ ++ + H DL I
Sbjct: 94 MTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT 151
Query: 59 GNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH 116
G+ ++ GL R + + F PE + +Y+FG +L++ + ++
Sbjct: 152 GSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEY 210
Query: 117 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
P S + + + +T F E+ + C++ ER + K L+
Sbjct: 211 -PYSECQN--AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 264
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 88.1 bits (218), Expect = 2e-20
Identities = 33/176 (18%), Positives = 58/176 (32%), Gaps = 10/176 (5%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
H P++ V Q L Y S ++ D+ A IL E G
Sbjct: 97 CLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNILLSEPGL 153
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHI 117
+L FG S+ + PE + G+ + ++S G ++L K
Sbjct: 154 VKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
Query: 118 PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
+ Q + + G +++ CLQ P++RP + L+
Sbjct: 214 LFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSEVLL 265
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.2 bits (215), Expect = 4e-20
Identities = 28/219 (12%), Positives = 61/219 (27%), Gaps = 40/219 (18%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-------DLNAYRI 53
+ +L +L + + +++ L A L + + DL + I
Sbjct: 83 HEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 139
Query: 54 LFDEDGNPRLSTFGLMKNSRDGKSY----STNLAFTP----PEYLRT------GRVTPES 99
L ++G ++ GL + T PE L +
Sbjct: 140 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA 199
Query: 100 VIYSFGTLLLDLLSGKHIPPSHAL----------------DLIRDRNLQMLTDSCLEGQF 143
IY+ G + ++ I H ++ + Q L +
Sbjct: 200 DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ 259
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
+ + + ++ C R + LS L ++
Sbjct: 260 SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.4 bits (213), Expect = 6e-20
Identities = 31/183 (16%), Positives = 70/183 (38%), Gaps = 12/183 (6%)
Query: 9 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 68
+ + ++ +A ++Y + + DL A IL + + ++S FGL
Sbjct: 98 KFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAARNILVNSNLVCKVSDFGL 156
Query: 69 MKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 121
+ D + + +T PE + + T S ++SFG ++ ++++ P
Sbjct: 157 SRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 216
Query: 122 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181
+ + + + D + + +L +C Q E RP +V+ L L +
Sbjct: 217 ----LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 272
Query: 182 ETE 184
+
Sbjct: 273 APD 275
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.1 bits (212), Expect = 9e-20
Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 10/169 (5%)
Query: 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 76
+ + +A+ +E+ S+ ++ DL A IL E ++ FGL ++
Sbjct: 130 FLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 188
Query: 77 SYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 130
Y L + PE + T +S ++SFG LL ++ S P + D
Sbjct: 189 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---GVKIDEE 245
Query: 131 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 246 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.4 bits (211), Expect = 1e-19
Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 14/181 (7%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+ + E P+ + V AL Y ++ DL A ILF DG+
Sbjct: 91 CAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGD 148
Query: 61 PRLSTFGLMKNSRDGKSYST----NLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDL 111
+L+ FG+ + + PE + ++ ++S G L+++
Sbjct: 149 IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 208
Query: 112 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 171
+ PP H L+ + L++ + +CL+ R
Sbjct: 209 AEIE--PPHHELNPM-RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQ 265
Query: 172 L 172
L
Sbjct: 266 L 266
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.0 bits (207), Expect = 3e-19
Identities = 38/195 (19%), Positives = 70/195 (35%), Gaps = 21/195 (10%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
L + + + A + L+ AL Y SK ++ D+ A +L +
Sbjct: 89 CTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARNVLVSSNDC 146
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEY-----LRTGRVTPESVIYSFGTLLLDLLSGK 115
+L FGL + D Y + P ++ + R T S ++ FG + ++L
Sbjct: 147 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 206
Query: 116 HIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 170
P + + I + + +C L L ++C Y+P RP
Sbjct: 207 VKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYDPSRRPRFT 257
Query: 171 SLVTALSPLQKETEV 185
L LS + +E +
Sbjct: 258 ELKAQLSTILEEEKA 272
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.1 bits (207), Expect = 5e-19
Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 10/187 (5%)
Query: 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 62
+ + + + L +A+ + + SK ++ DL A IL +
Sbjct: 127 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-IHRDLAARNILLTHGRITK 185
Query: 63 LSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH 116
+ FGL ++ ++ +Y + + PE + T ES ++S+G L +L S
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245
Query: 117 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
P + D + + E+ + C +P +RP K +V +
Sbjct: 246 SPYPG---MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
Query: 177 SPLQKET 183
E+
Sbjct: 303 EKQISES 309
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 81.3 bits (200), Expect = 4e-18
Identities = 35/181 (19%), Positives = 63/181 (34%), Gaps = 14/181 (7%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M L +L E + +++ L + + + DL IL D+D N
Sbjct: 92 MKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLNIV-HRDLKPENILLDDDMN 148
Query: 61 PRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRV------TPESVIYSFGTLLLDL 111
+L+ FG G+ ++ PE + E ++S G ++ L
Sbjct: 149 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 208
Query: 112 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 171
L+G PP + + M + DD + L SR L +P++R +
Sbjct: 209 LAGS--PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 266
Query: 172 L 172
Sbjct: 267 A 267
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.6 bits (198), Expect = 5e-18
Identities = 35/187 (18%), Positives = 65/187 (34%), Gaps = 12/187 (6%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
P +L R + +A+ + Y SK ++ DL A +L
Sbjct: 92 APLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAARNLLLATRDL 149
Query: 61 PRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
++ FGLM+ + A+ PE L+T + S + FG L ++ +
Sbjct: 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
P L + L + +D ++ + +C ++P +RP +L
Sbjct: 210 YGQEPWI---GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 266
Query: 174 TALSPLQ 180
L Q
Sbjct: 267 DFLLEAQ 273
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 81.7 bits (201), Expect = 5e-18
Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 20/226 (8%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DED 58
M L + + E + M + + + + L + ++ DL I+F
Sbjct: 105 MSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRS 162
Query: 59 GNPRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
+L FGL + +S F PE V + ++S G L LLSG
Sbjct: 163 NELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 222
Query: 116 HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL--- 172
P + D ++ + + L +P R
Sbjct: 223 --SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 280
Query: 173 --VTALSPLQKETEVPSHVLMGIPHS------ASVSPLSPLGEACS 210
+T + +++++PS I S A PL PLG +
Sbjct: 281 PWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISN 326
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.4 bits (198), Expect = 8e-18
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 11/176 (6%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+ +L + M V QALE+ S ++ D+ + IL DG+
Sbjct: 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGS 154
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKH 116
+L+ FG +S + + TP PE + P+ I+S G + ++++ G+
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE- 213
Query: 117 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
PP + +R + T+ E Q + +RCL + +R + K L
Sbjct: 214 -PPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 79.4 bits (195), Expect = 1e-17
Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 12/174 (6%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+ TL + PM + V+ QAL + G ++ D+ I+
Sbjct: 93 VDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNA 149
Query: 61 PRLSTFGLMKNSRDGKSYSTNL-------AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
++ FG+ + D + T + PE R V S +YS G +L ++L+
Sbjct: 150 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 209
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167
G+ PP + + D + +L + + L P R
Sbjct: 210 GE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY 261
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.5 bits (193), Expect = 3e-17
Identities = 32/179 (17%), Positives = 54/179 (30%), Gaps = 13/179 (7%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
L + M R L + Y G + D+ +L DE N
Sbjct: 85 CSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGI-THRDIKPENLLLDERDN 141
Query: 61 PRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESV-IYSFGTLLLDLLS 113
++S FGL R L + PE L+ E V ++S G +L +L+
Sbjct: 142 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 201
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
G+ + + + + D L+ + L P R +
Sbjct: 202 GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH---KILVENPSARITIPDI 257
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.0 bits (194), Expect = 3e-17
Identities = 37/174 (21%), Positives = 63/174 (36%), Gaps = 17/174 (9%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+ L H+ H + + L++ SKG +Y DL IL D+DG+
Sbjct: 85 LNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDNILLDKDGH 141
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVTPESVIYSFGTLLLDLLSGKH 116
+++ FG+ K + G + + T PE L + +SFG LL ++L G+
Sbjct: 142 IKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 201
Query: 117 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERPN 168
++ + L S E L + EP +R
Sbjct: 202 PFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLG 247
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.5 bits (193), Expect = 5e-17
Identities = 28/177 (15%), Positives = 63/177 (35%), Gaps = 9/177 (5%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+ + + + + + + V + +AL++ S + D+ I++ +
Sbjct: 83 ISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNIG-HFDIRPENIIYQTRRS 140
Query: 61 PR--LSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
+ FG + + G ++ + PE + V+ + ++S GTL+ LLSG
Sbjct: 141 STIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI 200
Query: 116 HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
P A + M + + + + E + R L E + R
Sbjct: 201 --NPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEA 255
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.6 bits (188), Expect = 2e-16
Identities = 32/186 (17%), Positives = 63/186 (33%), Gaps = 15/186 (8%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
N L K++ + ALEY K ++ DL IL +ED +
Sbjct: 90 AKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMH 146
Query: 61 PRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
+++ FG K S+ + PE L S +++ G ++ L++G
Sbjct: 147 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
Query: 115 KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174
+ LI + +++ E F + + L + L + +R + +
Sbjct: 207 LPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 260
Query: 175 ALSPLQ 180
Sbjct: 261 YGPLKA 266
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.8 bits (188), Expect = 2e-16
Identities = 40/184 (21%), Positives = 68/184 (36%), Gaps = 11/184 (5%)
Query: 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 61
P + + H + + +A+ +EY SK ++ DL A +L ED
Sbjct: 116 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTEDNVM 174
Query: 62 RLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
+++ FGL ++ Y + + PE L T +S ++SFG LL ++ +
Sbjct: 175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 234
Query: 116 HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175
P + L L + EL + C P +RP K LV
Sbjct: 235 GSPYPG----VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
Query: 176 LSPL 179
L +
Sbjct: 291 LDRI 294
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 75.8 bits (186), Expect = 3e-16
Identities = 32/177 (18%), Positives = 56/177 (31%), Gaps = 9/177 (5%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA--LYHDLNAYRILFDED 58
+ L + E R++ + A++Y G N DED
Sbjct: 89 VSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 146
Query: 59 GNPRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
+S FGL K G ST + PE L + +S G + LL G
Sbjct: 147 SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 206
Query: 116 HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
PP + + + + + + + DD ++ +P +R +
Sbjct: 207 --PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 76.3 bits (187), Expect = 4e-16
Identities = 40/170 (23%), Positives = 61/170 (35%), Gaps = 9/170 (5%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
M L HL A + LE+ ++ +Y DL IL DE G+
Sbjct: 89 MNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFV-VYRDLKPANILLDEHGH 145
Query: 61 PRLSTFGLMKNSRDGKSYSTN--LAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHI 117
R+S GL + K +++ + PE L+ G + +S G +L LL G
Sbjct: 146 VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 205
Query: 118 PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167
H + + LT + + D EL L LQ + R
Sbjct: 206 FRQHKTKDKHEIDRMTLTMAV---ELPDSFSPELRSLLEGLLQRDVNRRL 252
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 75.9 bits (186), Expect = 6e-16
Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 9/177 (5%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--ED 58
+ L + E + M A + + + L++ ++ D+ I+ + +
Sbjct: 108 LSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSI-VHLDIKPENIMCETKKA 165
Query: 59 GNPRLSTFGLMKNSRDGKS---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
+ ++ FGL + + F PE + V + +++ G L LLSG
Sbjct: 166 SSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 225
Query: 116 HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
P D + D + E LQ EPR+R
Sbjct: 226 --SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 280
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 74.7 bits (183), Expect = 1e-15
Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 12/162 (7%)
Query: 9 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 68
++ + + ALEY SK +Y DL IL D++G+ +++ FG
Sbjct: 92 FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGF 150
Query: 69 MKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR 127
K D + + PE + T +SFG L+ ++L+G
Sbjct: 151 AKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY-------- 202
Query: 128 DRNLQMLTDSCLEGQFTDDDGT--ELVRLASRCLQYEPRERP 167
D N + L + ++ L SR + + +R
Sbjct: 203 DSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRL 244
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.8 bits (178), Expect = 4e-15
Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 9/180 (5%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---E 57
+ L + ++ + +A++Y S A + D+ +L+
Sbjct: 91 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA-HRDVKPENLLYTSKRP 149
Query: 58 DGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
+ +L+ FG K + S +T + PE L + ++S G ++ LL G
Sbjct: 150 NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 209
Query: 115 KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERPNPKSL 172
S+ I + E + E+ L L+ EP +R
Sbjct: 210 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 269
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.3 bits (174), Expect = 9e-15
Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 18/176 (10%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-G 59
E ++ + + +A+ +C + G L+ D+ IL D + G
Sbjct: 91 PEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LHRDIKDENILIDLNRG 148
Query: 60 NPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKH 116
+L FG +D + ++PPE++R R S ++S G LL D++ G
Sbjct: 149 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 117 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
P H ++IR + F +E L CL P +RP + +
Sbjct: 209 -PFEHDEEIIRGQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.4 bits (174), Expect = 1e-14
Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 8 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67
+L + ++ L + L++ S ++ DL IL G +L+ FG
Sbjct: 103 TYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFG 161
Query: 68 LMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI------- 117
L + + ++ L + PE L ++S G + ++ K +
Sbjct: 162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 221
Query: 118 --------------PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 163
D+ R + +F D L +CL + P
Sbjct: 222 DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP 281
Query: 164 RERPNPKSL 172
+R + S
Sbjct: 282 AKRISAYSA 290
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.9 bits (173), Expect = 2e-14
Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 12/179 (6%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+ L E + + + + Y S A + DL I+ +
Sbjct: 95 VAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQIA-HFDLKPENIMLLDRNV 151
Query: 61 PR----LSTFGLMKNSRDGKSYSTNL---AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
P+ + FGL G + F PE + + E+ ++S G + LLS
Sbjct: 152 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
G + + E ++ + R L +P++R +
Sbjct: 212 GASPFLGDTKQETLANVSAV--NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 268
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 70.6 bits (172), Expect = 2e-14
Identities = 26/191 (13%), Positives = 54/191 (28%), Gaps = 18/191 (9%)
Query: 9 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL---ST 65
LF++ + L + + +EY SK ++ D+ L L
Sbjct: 91 DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIID 149
Query: 66 FGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
FGL K RD +++ + + + S G +L+ G
Sbjct: 150 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 209
Query: 115 KHIPPSHALDLIRDRNLQMLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
R + ++ S +E + C ++P+ L
Sbjct: 210 SLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 269
Query: 173 VTAL-SPLQKE 182
+ ++
Sbjct: 270 RQLFRNLFHRQ 280
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 68.3 bits (166), Expect = 1e-13
Identities = 18/193 (9%), Positives = 43/193 (22%), Gaps = 19/193 (9%)
Query: 8 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPR 62
+ L + ++ K +Y D+ L
Sbjct: 88 EDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIY 146
Query: 63 LSTFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVTPESVIYSFGTLLLDL 111
+ FG++K RD + + + + + G + +
Sbjct: 147 VVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYF 206
Query: 112 LSGKHIPPSHALDLIRDRNLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 169
L G + + ++ S + E + P+
Sbjct: 207 LRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDY 266
Query: 170 KSLVTALSPLQKE 182
L S + +
Sbjct: 267 DYLQGLFSKVLER 279
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.1 bits (163), Expect = 4e-13
Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 13/175 (7%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
L HL + A + ALEY S+ +Y D+ ++ D+DG+
Sbjct: 87 ANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSRDV-VYRDIKLENLMLDKDGH 143
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKH 116
+++ FGL K + TP PE L + G ++ +++ G+
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
Query: 117 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 171
+ + + + L E +F E L + L+ +P++R
Sbjct: 204 PFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGP 252
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.3 bits (158), Expect = 1e-12
Identities = 32/191 (16%), Positives = 54/191 (28%), Gaps = 28/191 (14%)
Query: 9 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 68
+ + + + +L Q LEY + DL +L DE+G +L+ FGL
Sbjct: 88 VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPNNLLLDENGVLKLADFGL 146
Query: 69 MKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 123
K+ T+ T P +++ G +L +LL P +
Sbjct: 147 AKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD 206
Query: 124 DLIRDRNLQMLTDSCLE----------------------GQFTDDDGTELVRLASRCLQY 161
R + L E G +L+ L +
Sbjct: 207 LDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLF 266
Query: 162 EPRERPNPKSL 172
P R
Sbjct: 267 NPCARITATQA 277
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.2 bits (158), Expect = 2e-12
Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 35/206 (16%)
Query: 1 MPNETLAKHLFHW-ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 59
+ + L+ +T + + + + L+Y S L+ DL +L +
Sbjct: 88 LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPSNLLLNTTC 146
Query: 60 NPRLSTFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVTPESV-IYSFGTLLLDL 111
+ ++ FGL + + ++ + PE + + +S+ I+S G +L ++
Sbjct: 147 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 206
Query: 112 LSGKHIPPSHALDLIRDRNLQMLTDSCLE-------------------------GQFTDD 146
LS + I P + L +L E + +
Sbjct: 207 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 266
Query: 147 DGTELVRLASRCLQYEPRERPNPKSL 172
++ + L + L + P +R +
Sbjct: 267 ADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.5 bits (156), Expect = 2e-12
Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 29/200 (14%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
++ L K + + + + L Q L +C S R L+ DL +L + +G
Sbjct: 82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 140
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
+L+ FGL + T+ T P L + I+S G + ++++ +
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 116 HI-PPSHALDLIRD--RNLQMLTDSCLEGQFTDDD--------------------GTELV 152
+ P +D + R L + G + D +
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 260
Query: 153 RLASRCLQYEPRERPNPKSL 172
L S+ L Y+P +R + K+
Sbjct: 261 SLLSQMLHYDPNKRISAKAA 280
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.3 bits (153), Expect = 7e-12
Identities = 37/202 (18%), Positives = 59/202 (29%), Gaps = 32/202 (15%)
Query: 1 MPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDED 58
+P + + + L ++L Y S G + H D+ +L D D
Sbjct: 101 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPD 158
Query: 59 GNP-RLSTFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+L FG K G+ + + P T ++S G +L +LL
Sbjct: 159 TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
Query: 114 GKHI----PPSHALDLI-------------------RDRNLQMLTDSCLEGQFTDDDGTE 150
G+ I L I + + F E
Sbjct: 219 GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 278
Query: 151 LVRLASRCLQYEPRERPNPKSL 172
+ L SR L+Y P R P
Sbjct: 279 AIALCSRLLEYTPTARLTPLEA 300
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.3 bits (153), Expect = 8e-12
Identities = 27/191 (14%), Positives = 59/191 (30%), Gaps = 28/191 (14%)
Query: 9 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 68
+ + +V + + L Y + G + DL + +ED ++ FGL
Sbjct: 109 LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII-HRDLKPGNLAVNEDCELKILDFGL 167
Query: 69 MKNSRDGKSYSTNLAF--TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI--------- 117
+ + + + P L R T I+S G ++ ++++GK +
Sbjct: 168 ARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ 227
Query: 118 ----------PPSHALDLIRDRNLQMLTDSCLE------GQFTDDDGTELVRLASRCLQY 161
PP+ + ++ + E + V L + L
Sbjct: 228 LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVL 287
Query: 162 EPRERPNPKSL 172
+ +R
Sbjct: 288 DAEQRVTAGEA 298
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 62.9 bits (152), Expect = 1e-11
Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 8/159 (5%)
Query: 11 FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 70
+ EY S +Y DL +L D+ G +++ FG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 71 NSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR 129
+ + PE + + ++ G L+ ++ +G PP A I+
Sbjct: 190 RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY--PPFFADQPIQ-- 245
Query: 130 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+ +F ++L L LQ + +R
Sbjct: 246 --IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.5 bits (148), Expect = 2e-11
Identities = 25/193 (12%), Positives = 51/193 (26%), Gaps = 30/193 (15%)
Query: 9 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 68
F + + + L + L +C S+ L+ DL +L + +G +L+ FGL
Sbjct: 89 KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANFGL 147
Query: 69 MKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----- 118
+ + T P + ++S G + +L +
Sbjct: 148 ARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207
Query: 119 -------------------PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159
L + M + L L
Sbjct: 208 VDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLL 267
Query: 160 QYEPRERPNPKSL 172
+ P +R + +
Sbjct: 268 KCNPVQRISAEEA 280
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 60.7 bits (146), Expect = 5e-11
Identities = 30/193 (15%), Positives = 64/193 (33%), Gaps = 29/193 (15%)
Query: 8 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67
K L ++ +L L + YC + L+ DL +L + +G +++ FG
Sbjct: 87 KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFG 145
Query: 68 LMKNSRDGKSYSTNLAFTP-----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
L + T+ T + + + + I+S G + ++++G + P +
Sbjct: 146 LARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 123 LDLIRDRNLQMLTDSCLEG-----------------------QFTDDDGTELVRLASRCL 159
R ++L + F + L S+ L
Sbjct: 206 EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKML 265
Query: 160 QYEPRERPNPKSL 172
+ +P +R K
Sbjct: 266 KLDPNQRITAKQA 278
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.8 bits (141), Expect = 2e-10
Identities = 34/199 (17%), Positives = 59/199 (29%), Gaps = 36/199 (18%)
Query: 9 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 68
L + RV+ L L Y L+ D+ A +L DG +L+ FGL
Sbjct: 105 GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGL 163
Query: 69 MKNSRDGKSYSTN--------LAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPP 119
+ K+ N L + PPE L R P ++ G ++ ++ + I
Sbjct: 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 223
Query: 120 SHALDLIRDRNLQMLTDSCLEGQFTDDDGT--------------------------ELVR 153
+ Q+ E D+ +
Sbjct: 224 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALD 283
Query: 154 LASRCLQYEPRERPNPKSL 172
L + L +P +R +
Sbjct: 284 LIDKLLVLDPAQRIDSDDA 302
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.9 bits (139), Expect = 4e-10
Identities = 35/174 (20%), Positives = 56/174 (32%), Gaps = 12/174 (6%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+ L HL E V + ALE+ G +Y D+ IL D +G+
Sbjct: 111 INGGELFTHLSQRERFTEHEVQI--YVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGH 167
Query: 61 PRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLS 113
L+ FGL K ++ EY+ +S G L+ +LL+
Sbjct: 168 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 227
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 167
G P + E + + L R L +P++R
Sbjct: 228 GA--SPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL 279
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.9 bits (128), Expect = 1e-08
Identities = 31/213 (14%), Positives = 67/213 (31%), Gaps = 49/213 (23%)
Query: 9 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP------R 62
+ +E + ++ L L+Y + ++ D+ +L + +P +
Sbjct: 113 LIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK 172
Query: 63 LSTFGLMKNSRDGKSYS-TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI---- 117
++ G + + S + PE L + I+S L+ +L++G +
Sbjct: 173 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 232
Query: 118 ---------------------PPSHALDLIRDRNLQMLTDSCLEG--------------- 141
PS+ L + + L
Sbjct: 233 EGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE 292
Query: 142 --QFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
+F+ D+ E+ S LQ +PR+R + L
Sbjct: 293 KYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.8 bits (123), Expect = 4e-08
Identities = 27/188 (14%), Positives = 54/188 (28%), Gaps = 28/188 (14%)
Query: 12 HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL--M 69
+ + ++ + + L+Y S + DL + +ED ++ FGL
Sbjct: 112 IVKCQKLTDDHVQFLIYQILRGLKYIHSADII-HRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 70 KNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH------------- 116
+ +T P L I+S G ++ +LL+G+
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 117 ------IPPSHALDLIRDRNLQMLTDSCLE------GQFTDDDGTELVRLASRCLQYEPR 164
P + L I + + S + V L + L +
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
Query: 165 ERPNPKSL 172
+R
Sbjct: 291 KRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 51.0 bits (121), Expect = 9e-08
Identities = 27/209 (12%), Positives = 63/209 (30%), Gaps = 43/209 (20%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+ N + + + + +AL+YC S G + D+ + ++ D +
Sbjct: 114 VNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIM-HRDVKPHNVMIDHEHR 167
Query: 61 P-RLSTFGLMKNSRDGKSYS----TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
RL +GL + G+ Y+ + P + ++S G +L ++ K
Sbjct: 168 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227
Query: 116 H--------------------------------IPPSHALDLIRDRNLQMLTDSCLEGQF 143
I + I R+ + + + +
Sbjct: 228 EPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN 287
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSL 172
E + + L+Y+ + R +
Sbjct: 288 QHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 48.0 bits (113), Expect = 3e-07
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K++G+ F + +A CY + I + Y R+LCYL P+ AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 347
+ A + M +EA L+ +L
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Length = 153 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Score = 40.0 bits (92), Expect = 1e-04
Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 16/127 (12%)
Query: 237 SFQMWTDQ-MQETLNSKKKGDVAFRQKDLKDAIECYTQF---------------IDAGTM 280
+ ++ +Q + K++G+ F++ ++ +AI Y + +D
Sbjct: 5 IYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKN 64
Query: 281 VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVAL 340
+ + + CY + A++ A + I A Y A G EA+ L
Sbjct: 65 IEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENL 124
Query: 341 KEGTTLE 347
+ +L
Sbjct: 125 YKAASLN 131
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (92), Expect = 1e-04
Identities = 19/126 (15%), Positives = 43/126 (34%), Gaps = 15/126 (11%)
Query: 237 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVS------------- 282
S++M +++ E K++G V F++ K A+ Y + + S
Sbjct: 1 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 60
Query: 283 -PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 341
+ ++C+L A+ +A + + A A+ A+ +
Sbjct: 61 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 120
Query: 342 EGTTLE 347
+ L
Sbjct: 121 KVLQLY 126
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (94), Expect = 2e-04
Identities = 26/211 (12%), Positives = 64/211 (30%), Gaps = 40/211 (18%)
Query: 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
+ E + +L + ++ + +++ S G ++ DL I+ D
Sbjct: 99 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCT 157
Query: 61 PRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 117
++ FGL + + + + PE + I+S G ++ +++ K +
Sbjct: 158 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217
Query: 118 PPSHALDLIRDRNLQMLTDSCLE------------------------------------G 141
P ++ ++ L C E
Sbjct: 218 FPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS 277
Query: 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSL 172
+ ++ L S+ L +P +R +
Sbjct: 278 EHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 128 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (87), Expect = 4e-04
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 1/97 (1%)
Query: 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALND 305
++ L K+ G+ A+++KD A++ Y + + + T ++ Y
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCREL 60
Query: 306 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 342
+A + A A + +G + K+
Sbjct: 61 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (89), Expect = 4e-04
Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 304
+ E ++ +G +A +KD K A++ ++ D + Y + +A
Sbjct: 2 LVEAISLWNEGVLAADKKDWKGALDAFSAVQDP----HSRICFNIGCMYTILKNMTEAEK 57
Query: 305 DAMQAQIISPIWHIASYLQAAALSAMGMENEA 336
++ +A + + + A
Sbjct: 58 AFTRSINRDKHLAVAYFQRGMLYYQTEKYDLA 89
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 168 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Score = 38.4 bits (88), Expect = 5e-04
Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 15/126 (11%)
Query: 237 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFI--------------DAGTMV 281
S++M T + E K+KG V F+ A+ Y + + A
Sbjct: 3 SWEMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESF 62
Query: 282 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 341
+ ++CYL A+ +A + Y + A M A+ +
Sbjct: 63 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFE 122
Query: 342 EGTTLE 347
+ +
Sbjct: 123 KVLEVN 128
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 5e-04
Identities = 16/110 (14%), Positives = 31/110 (28%), Gaps = 1/110 (0%)
Query: 233 ANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC 292
A + + + V + Q + AI+ Y + I+ P Y +
Sbjct: 222 AVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANA 280
Query: 293 YLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 342
+A + A + P + A G EA ++
Sbjct: 281 LKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRK 330
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 117 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.2 bits (82), Expect = 0.001
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K+KG+ A ++ DA++CY++ I RS Y Q A D +
Sbjct: 7 KEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYS-NRSAAYAKKGDYQKAYEDGCKTVD 65
Query: 312 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 347
+ P W +AAAL + EA+ +EG E
Sbjct: 66 LKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 101
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 357 | |||
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.98 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.98 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.97 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.97 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.97 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.97 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.97 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.97 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.97 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.97 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.96 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.96 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.96 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.95 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.95 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.87 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.85 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.84 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.81 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.8 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.78 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.76 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.75 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.73 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.72 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.7 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.68 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.64 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.63 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.62 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.61 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.6 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.6 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.54 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.51 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.48 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.46 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.38 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.36 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.36 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.33 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.33 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.3 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.29 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.26 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.25 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.25 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.24 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.23 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.22 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 99.11 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 99.1 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.09 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.09 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 99.05 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 99.01 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.97 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.95 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.78 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.72 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.68 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.63 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.57 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.48 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.46 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.38 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.31 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.23 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 98.17 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 98.0 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.81 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.46 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 91.78 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 90.98 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 90.47 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 89.77 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 88.29 | |
| d1wr0a1 | 77 | Vacuolar sorting protein 4b (VPS4B, SKD1 protein) | 87.04 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 86.79 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 86.13 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 83.8 | |
| d2cfua2 | 505 | Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI | 81.69 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-40 Score=289.42 Aligned_cols=179 Identities=20% Similarity=0.283 Sum_probs=141.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||||.++|.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~ 162 (276)
T d1uwha_ 85 CEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162 (276)
T ss_dssp CCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC---------
T ss_pred CCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccCCccc
Confidence 579999999964 4567999999999999999999999999 999999999999999999999999998765432
Q ss_pred -CCccCCCCCCchhhhcC---CCCCCcccchhHHHHHHHHHcCCCCCCcchhHH-hhhccccccccccccCCCCchhHHH
Q 018348 76 -KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
....||+.|||||++.+ ..++.++|||||||++|||+||+.||....... ...........+. ....+..+++.
T Consensus 163 ~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~ 241 (276)
T d1uwha_ 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD-LSKVRSNCPKA 241 (276)
T ss_dssp ---CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCC-GGGSCTTCCHH
T ss_pred ccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCc-chhccccchHH
Confidence 23468999999999975 347889999999999999999999986532211 1111111111111 12334456789
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+.+|+.+||+.||++|||+.+|+..|+.+...
T Consensus 242 l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 242 MKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999887654
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2e-38 Score=281.23 Aligned_cols=174 Identities=20% Similarity=0.257 Sum_probs=136.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++.. ..+.+++.+++.|+.||+.||.|||+++ ++||||||+||||+.++.+||+|||+++......
T Consensus 109 ~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~ 186 (299)
T d1jpaa_ 109 MENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 186 (299)
T ss_dssp CTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred cCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEECCCCcEEECCcccceEccCCCCcce
Confidence 589999999863 4567999999999999999999999999 9999999999999999999999999998654332
Q ss_pred -----CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 77 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 77 -----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
...||+.|||||.+.++.++.++|||||||++|||+| |..||.............. ..+...+..++..
T Consensus 187 ~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~ 261 (299)
T d1jpaa_ 187 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-----DYRLPPPMDCPSA 261 (299)
T ss_dssp ---------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-----TCCCCCCTTCCHH
T ss_pred eeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCccchHH
Confidence 1246889999999998899999999999999999998 7878765443322221111 1122345567789
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+.+|+.+||+.||++|||+.+|++.|+++..
T Consensus 262 l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 262 LHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 9999999999999999999999999988754
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-38 Score=275.58 Aligned_cols=165 Identities=22% Similarity=0.346 Sum_probs=139.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC--Cc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~--~~ 78 (357)
++||+|.++|. +.+.+++..+..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...... ..
T Consensus 88 ~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 164 (263)
T d2j4za1 88 APLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 164 (263)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEET
T ss_pred cCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCccccc
Confidence 57999999996 3568999999999999999999999999 9999999999999999999999999998765443 45
Q ss_pred cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 79 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
.||+.|||||++.+..++.++|||||||++|+|++|+.||............... ....|..+++++.+++.+|
T Consensus 165 ~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~ 238 (263)
T d2j4za1 165 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------EFTFPDFVTEGARDLISRL 238 (263)
T ss_dssp TEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHHHHHH
T ss_pred CCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHHHHHHH
Confidence 7899999999999888999999999999999999999998765433322221111 1223445668899999999
Q ss_pred hhcCCCCCCChhhHHH
Q 018348 159 LQYEPRERPNPKSLVT 174 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~ 174 (357)
|+.||++|||+.++++
T Consensus 239 L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 239 LKHNPSQRPMLREVLE 254 (263)
T ss_dssp TCSSGGGSCCHHHHHT
T ss_pred ccCCHhHCcCHHHHHc
Confidence 9999999999999975
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-38 Score=278.86 Aligned_cols=175 Identities=22% Similarity=0.300 Sum_probs=142.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++....+.++++..++.|+.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~ 167 (272)
T d1qpca_ 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (272)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCccccc
Confidence 58999999986544557999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcc-hhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||+.|||||++.++.++.++|||||||++|||+||..|+... .......... ...+...|..+++.+.+|
T Consensus 168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~l 242 (272)
T d1qpca_ 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-----RGYRMVRPDNCPEELYQL 242 (272)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTCCHHHHHH
T ss_pred cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----hcCCCCCcccChHHHHHH
Confidence 346789999999999888999999999999999999976655432 2211111111 112223455667889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+.+||+.||++|||+.+|++.|+.+..
T Consensus 243 i~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 243 MRLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 999999999999999999999987653
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.3e-38 Score=279.15 Aligned_cols=176 Identities=20% Similarity=0.312 Sum_probs=145.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.++|.......+++..+..|+.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~ 173 (287)
T d1opja_ 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173 (287)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence 57999999997666788999999999999999999999999 9999999999999999999999999998765442
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcc-hhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||..|+|||++.++.++.++|||||||++|||++|..|+... ....... ..........+..+++.+.+|
T Consensus 174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~l~~l 248 (287)
T d1opja_ 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-----LLEKDYRMERPEGCPEKVYEL 248 (287)
T ss_dssp TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH-----HHHTTCCCCCCTTCCHHHHHH
T ss_pred ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHH-----HHhcCCCCCCCccchHHHHHH
Confidence 224688999999999999999999999999999999977665432 2211111 111122334455677899999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+.+||+.||++|||+.+|++.|+.+...
T Consensus 249 i~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 249 MRACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999887544
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-38 Score=274.53 Aligned_cols=174 Identities=19% Similarity=0.302 Sum_probs=133.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~ 159 (263)
T d1sm2a_ 82 MEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 159 (263)
T ss_dssp CTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC-------------
T ss_pred cCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCceee
Confidence 589999999863 4567999999999999999999999999 9999999999999999999999999988654332
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCc-chhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||..|+|||++.+..++.++|||||||++|||+|+..|+.. ........... ...+...|..+++++.++
T Consensus 160 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~l 234 (263)
T d1sm2a_ 160 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-----TGFRLYKPRLASTHVYQI 234 (263)
T ss_dssp -----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHH-----HTCCCCCCTTSCHHHHHH
T ss_pred cceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----hcCCCCCccccCHHHHHH
Confidence 24578999999999998999999999999999999996545433 22222111111 111223345566889999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+.+||+.||++|||+++|++.|+++.+
T Consensus 235 i~~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 235 MNHCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 999999999999999999999988753
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-38 Score=276.71 Aligned_cols=174 Identities=18% Similarity=0.215 Sum_probs=143.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||||.+++.. ....+++..+..|+.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~ 167 (285)
T d1u59a_ 90 AGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 167 (285)
T ss_dssp CTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhcccccccccc
Confidence 589999999853 4568999999999999999999999999 9999999999999999999999999998664332
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...||+.|+|||++.++.++.++|||||||++|||+| |..||............. ...+...|..+++++.
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~ 242 (285)
T d1u59a_ 168 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-----QGKRMECPPECPPELY 242 (285)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-----TTCCCCCCTTCCHHHH
T ss_pred cccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCcCCHHHH
Confidence 3357889999999998899999999999999999998 888876543322221111 1122344566778999
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
+||.+||+.||++|||+.+|.+.|+....
T Consensus 243 ~li~~cl~~~p~~RPs~~~i~~~L~~~~~ 271 (285)
T d1u59a_ 243 ALMSDCWIYKWEDRPDFLTVEQRMRACYY 271 (285)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 99999999999999999999998876543
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-38 Score=275.10 Aligned_cols=171 Identities=19% Similarity=0.231 Sum_probs=141.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
++||+|.+++. +..++++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 89 ~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 165 (277)
T d1xbba_ 89 AELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165 (277)
T ss_dssp CTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred CCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhccccccccc
Confidence 58999999996 4568999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...||+.|||||++.+..++.++|||||||++|||+| |..||.............. ..+...|..+++.+.
T Consensus 166 ~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~~~ 240 (277)
T d1xbba_ 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-----GERMGCPAGCPREMY 240 (277)
T ss_dssp C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHH
T ss_pred cccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCcccCHHHH
Confidence 2357899999999998899999999999999999998 7888765433322211111 122344556778999
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+||.+||+.||++|||+.+|...|+..
T Consensus 241 ~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 241 DLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence 999999999999999999999888654
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-38 Score=283.02 Aligned_cols=172 Identities=20% Similarity=0.278 Sum_probs=139.1
Q ss_pred CCCccHHhhhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC
Q 018348 1 MPNETLAKHLFHWE---------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 59 (357)
Q Consensus 1 ~~~gsL~~~l~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~ 59 (357)
++||||.++|.... ...+++..++.|+.||+.||.|||+++ |+||||||+||+++.++
T Consensus 123 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~Nill~~~~ 201 (325)
T d1rjba_ 123 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGK 201 (325)
T ss_dssp CTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEETTT
T ss_pred CCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhccccccCC
Confidence 57999999996532 146899999999999999999999999 99999999999999999
Q ss_pred CeEEecCCCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhcccc
Q 018348 60 NPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 132 (357)
Q Consensus 60 ~~kl~dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~ 132 (357)
.+||+|||+++...... ...||+.|||||++.++.++.++|||||||++|||+| |..||........-.
T Consensus 202 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~---- 277 (325)
T d1rjba_ 202 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY---- 277 (325)
T ss_dssp EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH----
T ss_pred eEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHH----
Confidence 99999999998654432 2346899999999998999999999999999999998 788876532211111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhc
Q 018348 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177 (357)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~ 177 (357)
.+.....+...|..+++.+.+||.+||+.||++|||+++|++.|.
T Consensus 278 ~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 278 KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 111112233445567789999999999999999999999999884
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-37 Score=273.86 Aligned_cols=175 Identities=21% Similarity=0.275 Sum_probs=137.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.+++.+++.|+.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++......
T Consensus 91 ~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~ 168 (283)
T d1mqba_ 91 MENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 168 (283)
T ss_dssp CTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC------------
T ss_pred cccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCCccce
Confidence 468899988854 4578999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcch-hHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...||..|||||++.++.++.++|||||||++|||++|..|+.... ...... ......+...+..++..+.
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~l~ 243 (283)
T d1mqba_ 169 TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK-----AINDGFRLPTPMDCPSAIY 243 (283)
T ss_dssp -----CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HHHTTCCCCCCTTCBHHHH
T ss_pred EeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHH-----HHhccCCCCCchhhHHHHH
Confidence 2357889999999999999999999999999999999766654322 111111 1111223345556778999
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+||.+||+.||++|||+.+|++.|+++...
T Consensus 244 ~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 244 QLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 999999999999999999999999887643
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-37 Score=272.35 Aligned_cols=167 Identities=19% Similarity=0.229 Sum_probs=137.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. .+++++.++..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .
T Consensus 99 ~~gg~L~~~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 174 (293)
T d1yhwa1 99 LAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (293)
T ss_dssp CTTCBHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred cCCCcHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeecccccccc
Confidence 57999999885 357999999999999999999999999 999999999999999999999999999876433 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............... .......+..+++.+.++|.
T Consensus 175 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~li~ 251 (293)
T d1yhwa1 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN---GTPELQNPEKLSAIFRDFLN 251 (293)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH---CSCCCSSGGGSCHHHHHHHH
T ss_pred ccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhC---CCCCCCCcccCCHHHHHHHH
Confidence 456999999999999888999999999999999999999998654322211111111 11112234456688999999
Q ss_pred HhhhcCCCCCCChhhHHH
Q 018348 157 RCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~~i~~ 174 (357)
+||+.||++|||+.++++
T Consensus 252 ~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 252 RCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp HHTCSSTTTSCCHHHHTT
T ss_pred HHccCChhHCcCHHHHhc
Confidence 999999999999999875
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-38 Score=278.14 Aligned_cols=175 Identities=22% Similarity=0.250 Sum_probs=134.1
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
++||+|.++|.... ...+++..++.|+.||+.||.|||+++ |+||||||+||||+.++.+||+||
T Consensus 100 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~~~~~Kl~DF 178 (299)
T d1ywna1 100 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDF 178 (299)
T ss_dssp CTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECC-
T ss_pred cCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECCCCcEEEccC
Confidence 57999999996432 245899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCC-CCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....||+.|+|||++.++.++.++|||||||++|||++|.. |+........-. .......
T Consensus 179 Gla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~----~~~~~~~ 254 (299)
T d1ywna1 179 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC----RRLKEGT 254 (299)
T ss_dssp -----CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHH----HHHHHTC
T ss_pred cchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHH----HHHhcCC
Confidence 999765432 23468999999999999999999999999999999999765 444322111100 0111111
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
....+..+++++.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 255 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il 295 (299)
T d1ywna1 255 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 23345556788999999999999999999999999998764
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-37 Score=271.24 Aligned_cols=168 Identities=17% Similarity=0.176 Sum_probs=134.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.++|. ..+.+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~ 161 (271)
T d1nvra_ 85 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 161 (271)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence 57899999996 4668999999999999999999999999 999999999999999999999999999865322
Q ss_pred -CCccCCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...+||+.|||||++.+..+ +.++|||||||++|+|++|+.||............. ............+++++.+
T Consensus 162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~ 238 (271)
T d1nvra_ 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW---KEKKTYLNPWKKIDSAPLA 238 (271)
T ss_dssp BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH---HTTCTTSTTGGGSCHHHHH
T ss_pred ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH---hcCCCCCCccccCCHHHHH
Confidence 34579999999999988765 678999999999999999998885432211100000 0001111122345678899
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
|+.+||+.||++|||+.+++.
T Consensus 239 li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 239 LLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHcCCChhHCcCHHHHhc
Confidence 999999999999999999865
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-37 Score=270.70 Aligned_cols=177 Identities=23% Similarity=0.299 Sum_probs=141.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.....+.+++.+++.|+.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 93 ~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 171 (285)
T d1fmka3 93 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 171 (285)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred cCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCceee
Confidence 57999999997555578999999999999999999999999 9999999999999999999999999998654332
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchh-HHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||..|+|||++..+.++.++||||||+++|||++|..|+..... ......... ....+.+..+++++.++
T Consensus 172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~l 246 (285)
T d1fmka3 172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-----GYRMPCPPECPESLHDL 246 (285)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTSCHHHHHH
T ss_pred ccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHh-----cCCCCCCcccCHHHHHH
Confidence 24578999999999999999999999999999999997766544322 111111111 11223455667899999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
|.+||+.||++|||+.+|+..|+......
T Consensus 247 i~~cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 247 MCQCWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 99999999999999999999999876554
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-37 Score=272.21 Aligned_cols=169 Identities=21% Similarity=0.271 Sum_probs=130.5
Q ss_pred CCCccHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC----CceecCCCCCCeeeCCCCCeEEecCCCccccCC
Q 018348 1 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG----RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 74 (357)
Q Consensus 1 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~----~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~ 74 (357)
++||||.+++... .++.+++..++.|+.||+.||.|||+++ +|+||||||+|||++.+|.+||+|||+++....
T Consensus 87 ~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~ 166 (269)
T d2java1 87 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 166 (269)
T ss_dssp CTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC--
T ss_pred CCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeeccc
Confidence 5799999999532 3568999999999999999999999854 399999999999999999999999999987654
Q ss_pred C----CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHH
Q 018348 75 G----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 150 (357)
Q Consensus 75 ~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
. ....||+.|||||++.+..++.++|||||||++|||++|+.||............... . ....+..++++
T Consensus 167 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~----~-~~~~~~~~s~~ 241 (269)
T d2java1 167 DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG----K-FRRIPYRYSDE 241 (269)
T ss_dssp ---------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT----C-CCCCCTTSCHH
T ss_pred CCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC----C-CCCCCcccCHH
Confidence 3 2457899999999999888999999999999999999999998765443322221111 1 11234456688
Q ss_pred HHHHHHHhhhcCCCCCCChhhHHH
Q 018348 151 LVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 151 l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+|+.+||+.||.+|||+.++++
T Consensus 242 l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 242 LNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHcCCChhHCcCHHHHHh
Confidence 999999999999999999999875
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-36 Score=270.78 Aligned_cols=169 Identities=18% Similarity=0.226 Sum_probs=129.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC---CCCCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~---~~~~~kl~dfg~~~~~~~~-- 75 (357)
++||||.++|. +.+.+++..+..|+.||+.||.|||+++ |+||||||+||++. .++.+||+|||+++.....
T Consensus 89 ~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~ 165 (307)
T d1a06a_ 89 VSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 165 (307)
T ss_dssp CCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred cCCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCCe
Confidence 57999999996 4678999999999999999999999999 99999999999994 5789999999999866543
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
.+..||+.|||||++.+..++.++|||||||++|+|++|..||................. ......+..+++.+.++
T Consensus 166 ~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~l 243 (307)
T d1a06a_ 166 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY--EFDSPYWDDISDSAKDF 243 (307)
T ss_dssp -------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCC--CCCTTTTTTSCHHHHHH
T ss_pred eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCC--CCCCccccCCCHHHHHH
Confidence 345799999999999988899999999999999999999999876544333222222111 11222344566889999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
+.+||+.||++|||+.++++
T Consensus 244 i~~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 244 IRHLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp HHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHccCCHhHCcCHHHHhc
Confidence 99999999999999999986
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-37 Score=267.51 Aligned_cols=167 Identities=19% Similarity=0.265 Sum_probs=134.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCCCCeeeC-CCCCeEEecCCCccccCCC--C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG--K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-~~~H~dlk~~Nill~-~~~~~kl~dfg~~~~~~~~--~ 76 (357)
++||||.++|. +.+.+++..+..|+.||+.||.|||+++ +|+||||||+|||++ .++.+||+|||+++..... .
T Consensus 94 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~ 171 (270)
T d1t4ha_ 94 MTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 171 (270)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred CCCCcHHHHHh--ccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccC
Confidence 57999999996 3568999999999999999999999975 499999999999996 5789999999999865443 3
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhH-HhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
+..||+.|||||++.+ +++.++|||||||++|||++|+.||...... .+......... +...+...++++.++|
T Consensus 172 ~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~li 246 (270)
T d1t4ha_ 172 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEVKEII 246 (270)
T ss_dssp ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----CGGGGGCCCHHHHHHH
T ss_pred CcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC----CcccCccCCHHHHHHH
Confidence 4579999999999974 6999999999999999999999998653221 11111111111 1122333457899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.||++|||+.++++
T Consensus 247 ~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 247 EGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp HHHSCSSGGGSCCHHHHHT
T ss_pred HHHccCCHhHCcCHHHHhC
Confidence 9999999999999999875
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-37 Score=270.66 Aligned_cols=165 Identities=20% Similarity=0.261 Sum_probs=137.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.+++..+..++.|++.||.|||+.+ |+||||||+||+++.+|.+||+|||+++.....
T Consensus 90 ~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~ 166 (288)
T d1uu3a_ 90 AKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166 (288)
T ss_dssp CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred cCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCCcccc
Confidence 57999999986 4578999999999999999999999999 999999999999999999999999999876432
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
.+..||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...+|..+++.+.+|
T Consensus 167 ~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~l 240 (288)
T d1uu3a_ 167 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKARDL 240 (288)
T ss_dssp ---CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT------CCCCCTTCCHHHHHH
T ss_pred cccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC------CCCCCccCCHHHHHH
Confidence 2356999999999999889999999999999999999999998765433322221111 112344566889999
Q ss_pred HHHhhhcCCCCCCChhhHHH
Q 018348 155 ASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~ 174 (357)
|.+||+.||++|||+.++..
T Consensus 241 i~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 241 VEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp HHTTSCSSGGGSTTSGGGTC
T ss_pred HHHHccCCHhHCcCHHHHcC
Confidence 99999999999999998743
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8e-37 Score=271.69 Aligned_cols=167 Identities=19% Similarity=0.185 Sum_probs=137.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 80 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~g 80 (357)
++||+|..++. ..+++++..+..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.........|
T Consensus 97 ~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 97 CLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp CSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred cCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence 47889987775 4568999999999999999999999999 99999999999999999999999999998877778899
Q ss_pred CCCCCchhhhcC---CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 81 NLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 81 t~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
|+.|||||++.+ +.++.++|||||||++|||++|..||............... ......+..+++.+.+||.+
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~~s~~~~~li~~ 249 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 249 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCSCTTSCHHHHHHHHH
T ss_pred CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC----CCCCCCCCCCCHHHHHHHHH
Confidence 999999999864 45889999999999999999999988654332211111111 11112233456789999999
Q ss_pred hhhcCCCCCCChhhHHH
Q 018348 158 CLQYEPRERPNPKSLVT 174 (357)
Q Consensus 158 cl~~~p~~Rps~~~i~~ 174 (357)
||+.||++|||+.+++.
T Consensus 250 ~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 250 CLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp HTCSSGGGSCCHHHHTT
T ss_pred HCcCChhHCcCHHHHHh
Confidence 99999999999999875
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-37 Score=269.18 Aligned_cols=169 Identities=15% Similarity=0.181 Sum_probs=135.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++.+ ..+++++..+..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .
T Consensus 91 ~~~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~ 168 (288)
T d2jfla1 91 CAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 168 (288)
T ss_dssp CTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHT
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCccccc
Confidence 579999999853 3568999999999999999999999999 999999999999999999999999998764322 3
Q ss_pred CccCCCCCCchhhhc-----CCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 77 SYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
+..||+.|+|||++. +..++.++|||||||++|+|++|..||............... .......+..+++++
T Consensus 169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~s~~~ 245 (288)
T d2jfla1 169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS---EPPTLAQPSRWSSNF 245 (288)
T ss_dssp CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHS---CCCCCSSGGGSCHHH
T ss_pred ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC---CCCCCCccccCCHHH
Confidence 567999999999985 345789999999999999999999988654322211111111 011112334566889
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||.+||+.||++|||+.++++
T Consensus 246 ~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 246 KDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhHCcCHHHHhc
Confidence 99999999999999999999875
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-36 Score=260.58 Aligned_cols=171 Identities=25% Similarity=0.328 Sum_probs=141.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..+.+|+.|+++||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 158 (258)
T d1k2pa_ 81 MANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 158 (258)
T ss_dssp CTTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCC
T ss_pred cCCCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCceee
Confidence 478999999853 4568999999999999999999999999 9999999999999999999999999987654332
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||..|+|||.+.+..++.++||||||+++|||+| |+.||.......+...... ..+...|..+++.+.++
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~l 233 (258)
T d1k2pa_ 159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-----GLRLYRPHLASEKVYTI 233 (258)
T ss_dssp CCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-----TCCCCCCTTCCHHHHHH
T ss_pred cccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHh-----CCCCCCcccccHHHHHH
Confidence 3457889999999998899999999999999999998 7777765544333222211 12223445566899999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSP 178 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~ 178 (357)
|.+||+.||++|||+.+|+..|..
T Consensus 234 i~~cl~~dP~~RPt~~eil~~L~d 257 (258)
T d1k2pa_ 234 MYSCWHEKADERPTFKILLSNILD 257 (258)
T ss_dssp HHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred HHHHccCCHhHCcCHHHHHHHhhC
Confidence 999999999999999999998854
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-36 Score=272.15 Aligned_cols=171 Identities=20% Similarity=0.270 Sum_probs=133.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCCCCeeeCCCCCeEEecCCCccccCC--CCC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~--~~~ 77 (357)
++||+|.++|. +.+.+++..+..++.|++.||.|||++ + |+||||||+|||++.+|.+||+|||+++.... ..+
T Consensus 86 ~~gg~L~~~l~--~~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 162 (322)
T d1s9ja_ 86 MDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162 (322)
T ss_dssp CTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC--
T ss_pred CCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCcccc
Confidence 58999999996 356799999999999999999999975 7 99999999999999999999999999886533 345
Q ss_pred ccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccc------------------------
Q 018348 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------------ 133 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~------------------------ 133 (357)
.+||+.|+|||++.+..++.++||||+||++|||++|+.||...............
T Consensus 163 ~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
T d1s9ja_ 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242 (322)
T ss_dssp -CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------------
T ss_pred ccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccc
Confidence 68999999999999989999999999999999999999998653211110000000
Q ss_pred --------------cccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 134 --------------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 134 --------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
......+.......+.++.+++.+||+.||.+|||++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~ 297 (322)
T d1s9ja_ 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297 (322)
T ss_dssp ---CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 00000000011123578999999999999999999999986
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-36 Score=270.39 Aligned_cols=173 Identities=15% Similarity=0.176 Sum_probs=136.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC---CCCeEEecCCCccccCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG-- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~---~~~~kl~dfg~~~~~~~~-- 75 (357)
++||||.++|......++++.++..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 91 ~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~ 169 (335)
T d2ozaa1 91 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 169 (335)
T ss_dssp CCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCC
T ss_pred CCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-CccccccccccccccccccccccccccceeeeccCCCc
Confidence 57999999997555578999999999999999999999999 999999999999975 567999999999866543
Q ss_pred -CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccc--cCCCCchhHHHHH
Q 018348 76 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL--EGQFTDDDGTELV 152 (357)
Q Consensus 76 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 152 (357)
....||+.|||||++.+..++.++|||||||++|+|+||+.||...............+..... +......+++++.
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 249 (335)
T d2ozaa1 170 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 249 (335)
T ss_dssp CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHH
T ss_pred cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHH
Confidence 3457999999999999888999999999999999999999998654322211111111111111 1111123567899
Q ss_pred HHHHHhhhcCCCCCCChhhHHH
Q 018348 153 RLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~ 174 (357)
+||++||+.||++|||+.+++.
T Consensus 250 ~li~~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 250 MLIRNLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHccCChhHCcCHHHHHc
Confidence 9999999999999999999976
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-36 Score=270.94 Aligned_cols=174 Identities=16% Similarity=0.224 Sum_probs=141.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 92 ~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 169 (317)
T d1xkka_ 92 MPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 169 (317)
T ss_dssp CTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC---
T ss_pred ccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceeccccccccc
Confidence 478999998864 5678999999999999999999999999 9999999999999999999999999988654332
Q ss_pred --CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 77 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 77 --~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
...||..|+|||++.++.++.++|||||||++|||+| |..|+.......+... .....+...|..+++.+.+
T Consensus 170 ~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~-----i~~~~~~~~p~~~~~~~~~ 244 (317)
T d1xkka_ 170 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEKGERLPQPPICTIDVYM 244 (317)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHH-----HHHTCCCCCCTTBCHHHHH
T ss_pred ccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHH-----HHcCCCCCCCcccCHHHHH
Confidence 2357899999999999999999999999999999998 6666654332222111 1111223445567789999
Q ss_pred HHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 154 LASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
|+.+||+.||.+|||+.+|+..|..+..
T Consensus 245 li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 245 IMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999887754
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-36 Score=264.31 Aligned_cols=174 Identities=24% Similarity=0.338 Sum_probs=137.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
+++|+|.++|.......+++..+++|+.||+.||.|||+.+ ++||||||+||+++.+|.+|++|||+++..... ....
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~ 161 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 161 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence 57999999996533456999999999999999999999999 999999999999999999999999999875543 3456
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
+|..|+|||++.+..++.++||||||+++|||+| |..|+.......+..... ...+...+..+++.+.+|+.+|
T Consensus 162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~~~~li~~c 236 (262)
T d1byga_ 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-----KGYKMDAPDGCPPAVYEVMKNC 236 (262)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-----TTCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----cCCCCCCCccCCHHHHHHHHHH
Confidence 7899999999998899999999999999999998 565554433222221111 1123345556678999999999
Q ss_pred hhcCCCCCCChhhHHHHhcccc
Q 018348 159 LQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~~L~~~~ 180 (357)
|+.||.+|||+.+|++.|+.+.
T Consensus 237 l~~dP~~Rps~~~l~~~L~~i~ 258 (262)
T d1byga_ 237 WHLDAAMRPSFLQLREQLEHIK 258 (262)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCHhHCcCHHHHHHHHHHHH
Confidence 9999999999999999998774
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-36 Score=265.18 Aligned_cols=173 Identities=21% Similarity=0.285 Sum_probs=133.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+++++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~ 166 (273)
T d1mp8a_ 89 CTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 166 (273)
T ss_dssp CTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC---------------
T ss_pred ccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCcceec
Confidence 578999998853 4578999999999999999999999999 9999999999999999999999999998754332
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 154 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (357)
...||+.|+|||++.+..++.++|||||||++|||++ |..|+.............. ......+..+++.+.+|
T Consensus 167 ~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~l 241 (273)
T d1mp8a_ 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTLYSL 241 (273)
T ss_dssp ----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TCCCCCCTTCCHHHHHH
T ss_pred cceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHH
Confidence 3357889999999998899999999999999999998 7777655433222211111 11223455677899999
Q ss_pred HHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 155 ASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 155 i~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
|.+||+.||++|||+.+|+..|+.+.
T Consensus 242 i~~cl~~dp~~Rps~~ei~~~L~~i~ 267 (273)
T d1mp8a_ 242 MTKCWAYDPSRRPRFTELKAQLSTIL 267 (273)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 99999999999999999999988764
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3e-36 Score=267.77 Aligned_cols=174 Identities=21% Similarity=0.249 Sum_probs=139.6
Q ss_pred CCCccHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCC
Q 018348 1 MPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 58 (357)
Q Consensus 1 ~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~ 58 (357)
+++|||.++|.... ...+++..++.|+.|++.||+|||+++ ++||||||+|||++.+
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NILld~~ 176 (301)
T d1lufa_ 98 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGEN 176 (301)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGG
T ss_pred cCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccceEECCC
Confidence 57899999995321 235899999999999999999999999 9999999999999999
Q ss_pred CCeEEecCCCccccCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCC-CCCcchhHHhhhccc
Q 018348 59 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNL 131 (357)
Q Consensus 59 ~~~kl~dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~-~~~~~~~~~~~~~~~ 131 (357)
+.+||+|||+++..... .+..||+.|+|||++.+..++.++|||||||++|||++|.. |+.............
T Consensus 177 ~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~ 256 (301)
T d1lufa_ 177 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR 256 (301)
T ss_dssp GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred CcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHH
Confidence 99999999998754332 23457889999999999999999999999999999999975 444433222221111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
.. .....|..+++++.+|+.+||+.||++|||+.+|++.|+++.
T Consensus 257 ~~-----~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 257 DG-----NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp TT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cC-----CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 11 122345566789999999999999999999999999998874
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-35 Score=266.90 Aligned_cols=165 Identities=19% Similarity=0.303 Sum_probs=138.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.+++. +.+.+++..+..++.||+.||+|||+++ |+||||||+|||++.+|.+||+|||+++..... .
T Consensus 87 ~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~ 163 (337)
T d1o6la_ 87 ANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163 (337)
T ss_dssp CTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBC
T ss_pred cCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccCCcccc
Confidence 68999999996 4678999999999999999999999999 999999999999999999999999999865432 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
..+||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...+|..+++++.+||.
T Consensus 164 ~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~dli~ 237 (337)
T d1o6la_ 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLA 237 (337)
T ss_dssp CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred cceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHHHHH
Confidence 457999999999999999999999999999999999999998776544333222211 12344556688999999
Q ss_pred HhhhcCCCCCCC-----hhhHHH
Q 018348 157 RCLQYEPRERPN-----PKSLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps-----~~~i~~ 174 (357)
+||+.||.+||+ +.+++.
T Consensus 238 ~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 238 GLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHTCSSTTTSTTCSTTTHHHHHT
T ss_pred hhccCCchhhcccccccHHHHHc
Confidence 999999999996 566654
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.2e-35 Score=268.36 Aligned_cols=171 Identities=16% Similarity=0.131 Sum_probs=138.0
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC--CCCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~--~~~~~kl~dfg~~~~~~~~~-- 76 (357)
++||+|.++|.. ..+++++..+..|+.||+.||.|||+++ ++||||||+|||++ .++.+||+|||+++......
T Consensus 105 ~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 182 (350)
T d1koaa2 105 MSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 182 (350)
T ss_dssp CCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCE
T ss_pred CCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheeccccccc
Confidence 589999999953 4567999999999999999999999999 99999999999995 46889999999998766543
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...||+.|||||++.+..++.++|||||||++|+|++|..||................. .........+++.+.+||
T Consensus 183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li 260 (350)
T d1koaa2 183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFI 260 (350)
T ss_dssp EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CSCCGGGGGCCHHHHHHH
T ss_pred ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHH
Confidence 35789999999999988899999999999999999999999876543322211111100 011112234557899999
Q ss_pred HHhhhcCCCCCCChhhHHHH
Q 018348 156 SRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~~ 175 (357)
.+||+.||++|||+.+++..
T Consensus 261 ~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 261 RKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp HHHCCSSGGGSCCHHHHHHS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999873
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-35 Score=263.65 Aligned_cols=174 Identities=22% Similarity=0.302 Sum_probs=142.6
Q ss_pred CCCccHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
+++|+|.++|.... ...+++.+++.++.||+.||+|||+.+ ++||||||+|||++.++.+||+||
T Consensus 101 ~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~~~~~kl~df 179 (299)
T d1fgka_ 101 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADF 179 (299)
T ss_dssp CTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECST
T ss_pred cCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecCCCCeEeccc
Confidence 57999999996542 246899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccc
Q 018348 67 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139 (357)
Q Consensus 67 g~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
|+++..... ....||+.|+|||.+.++.++.++||||||+|+|||++ |..|+........... .....
T Consensus 180 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~-----i~~~~ 254 (299)
T d1fgka_ 180 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL-----LKEGH 254 (299)
T ss_dssp TCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-----HHTTC
T ss_pred hhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHH-----HHcCC
Confidence 998865432 23457889999999999999999999999999999998 5666654433322211 11122
Q ss_pred cCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccc
Q 018348 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180 (357)
Q Consensus 140 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~ 180 (357)
....|..+++.+.+||.+||+.||++|||+.+|++.|+.+.
T Consensus 255 ~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~ 295 (299)
T d1fgka_ 255 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295 (299)
T ss_dssp CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence 33445566789999999999999999999999999998774
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2e-35 Score=267.20 Aligned_cols=170 Identities=16% Similarity=0.146 Sum_probs=139.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC--CCCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~--~~~~~kl~dfg~~~~~~~~~-- 76 (357)
++||+|.+++.. .+.++++..+..|+.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++......
T Consensus 108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 579999998853 4567999999999999999999999999 99999999999997 67899999999998876543
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|..||................ .......+..+++.+.+||
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li 263 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD--WEFDEDAFSSVSPEAKDFI 263 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCC--CCCCSSTTTTSCHHHHHHH
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCcccccCCCHHHHHHH
Confidence 3468999999999999899999999999999999999999987654333221111111 1112233345668899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.||.+|||+.++++
T Consensus 264 ~~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 264 KNLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp HTTSCSSGGGSCCHHHHHT
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999976
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.5e-35 Score=261.30 Aligned_cols=165 Identities=21% Similarity=0.275 Sum_probs=138.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .+..
T Consensus 86 ~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 162 (316)
T d1fota_ 86 IEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC 162 (316)
T ss_dssp CCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCC
T ss_pred cCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEecccccccc
Confidence 57999999996 4668899999999999999999999999 999999999999999999999999999876554 3567
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
||+.|||||++.+..++.++|||||||++|+|++|..||............... ...+|..+++++.+++.+||
T Consensus 163 Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~L 236 (316)
T d1fota_ 163 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLSRLI 236 (316)
T ss_dssp SCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHHHT
T ss_pred CcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHh
Confidence 999999999999888999999999999999999999998765443332222111 11234456688999999999
Q ss_pred hcCCCCCC-----ChhhHHH
Q 018348 160 QYEPRERP-----NPKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rp-----s~~~i~~ 174 (357)
+.||.+|+ |+++++.
T Consensus 237 ~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 237 TRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp CSCTTTCTTSSTTTTHHHHT
T ss_pred hhCHHhccccchhhHHHHHc
Confidence 99999996 7888775
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.9e-35 Score=267.31 Aligned_cols=165 Identities=16% Similarity=0.205 Sum_probs=138.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
++||+|.+++. +.+.+++..+..|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .+..
T Consensus 123 ~~~g~l~~~l~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 199 (350)
T d1rdqe_ 123 VAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC 199 (350)
T ss_dssp CTTCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCE
T ss_pred ccccchhhhHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeeccccccccc
Confidence 57899999996 3568999999999999999999999999 999999999999999999999999999876544 3567
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHhh
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 159 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 159 (357)
||+.|||||++.+..++.++|||||||++|+|++|..||............... ....+..+++++.++|++||
T Consensus 200 Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~~L 273 (350)
T d1rdqe_ 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLLRNLL 273 (350)
T ss_dssp ECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHHHHHS
T ss_pred CccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHHHHHHHh
Confidence 999999999999888999999999999999999999998765443322222111 11234456688999999999
Q ss_pred hcCCCCCC-----ChhhHHH
Q 018348 160 QYEPRERP-----NPKSLVT 174 (357)
Q Consensus 160 ~~~p~~Rp-----s~~~i~~ 174 (357)
+.||.+|+ |+++++.
T Consensus 274 ~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 274 QVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CSCTTTCTTSSTTTTHHHHT
T ss_pred hhCHHhccccccccHHHHHc
Confidence 99999994 7888875
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-36 Score=260.73 Aligned_cols=173 Identities=20% Similarity=0.259 Sum_probs=140.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ..+.+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 92 ~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~ 169 (273)
T d1u46a_ 92 APLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169 (273)
T ss_dssp CTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEE
T ss_pred ecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhcccCCCcce
Confidence 478999998864 4567999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ---CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHc-CCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...|+..|+|||++.+..++.++||||||+++|||+| |..||.............. .....+.+..++..+.
T Consensus 170 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~----~~~~~~~~~~~~~~l~ 245 (273)
T d1u46a_ 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK----EGERLPRPEDCPQDIY 245 (273)
T ss_dssp C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT----SCCCCCCCTTCCHHHH
T ss_pred ecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHh----CCCCCCCcccccHHHH
Confidence 2346789999999999899999999999999999998 7888765543332222111 1222334455678999
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhccc
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPL 179 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~ 179 (357)
+|+.+||+.||++|||+.+|.+.|...
T Consensus 246 ~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 246 NVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 999999999999999999999988653
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.1e-35 Score=261.07 Aligned_cols=175 Identities=17% Similarity=0.271 Sum_probs=137.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+++++.++..|+.||+.||.|||+.+ ++||||||+||+++.++.++++|||.++.....
T Consensus 93 ~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~ 169 (277)
T d1o6ya_ 93 VDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 169 (277)
T ss_dssp CCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEECC-------
T ss_pred CCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhhcccccccc
Confidence 57899999986 4568999999999999999999999999 999999999999999999999999987654322
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....||+.|+|||++.+..++.++|||||||++|+|+||..||...............- +.........+++.+.+
T Consensus 170 ~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~l~~ 247 (277)
T d1o6ya_ 170 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEGLSADLDA 247 (277)
T ss_dssp ---------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC--CCCGGGTSSSCCHHHHH
T ss_pred ccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcC--CCCCchhccCCCHHHHH
Confidence 23468999999999998889999999999999999999999987654333222221111 11112233455688999
Q ss_pred HHHHhhhcCCCCCC-ChhhHHHHhcccc
Q 018348 154 LASRCLQYEPRERP-NPKSLVTALSPLQ 180 (357)
Q Consensus 154 li~~cl~~~p~~Rp-s~~~i~~~L~~~~ 180 (357)
+|.+||+.||++|| |++++...|.++.
T Consensus 248 li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 248 VVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp HHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred HHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 99999999999999 8999998887664
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-35 Score=262.37 Aligned_cols=176 Identities=22% Similarity=0.268 Sum_probs=141.7
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 111 ~~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~ 188 (311)
T d1r0pa_ 111 MKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 188 (311)
T ss_dssp CTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred eecCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence 578999999863 5567889999999999999999999999 9999999999999999999999999988654321
Q ss_pred ----CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHH
Q 018348 77 ----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 152 (357)
Q Consensus 77 ----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (357)
...||..|+|||.+..+.++.++||||||+++|||++|+.||........ ....+. ...+...|..+++.+.
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~---~~~~i~-~g~~~~~p~~~~~~l~ 264 (311)
T d1r0pa_ 189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLL-QGRRLLQPEYCPDPLY 264 (311)
T ss_dssp TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC---------CHHHHH-TTCCCCCCTTCCHHHH
T ss_pred eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH---HHHHHH-cCCCCCCcccCcHHHH
Confidence 23578899999999989999999999999999999998877764322110 001111 1112234455668899
Q ss_pred HHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 153 RLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 153 ~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
+||.+||+.||++|||+.+|++.|+.+...
T Consensus 265 ~li~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 265 EVMLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999999988754
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-35 Score=260.47 Aligned_cols=177 Identities=20% Similarity=0.247 Sum_probs=143.4
Q ss_pred CCCccHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecC
Q 018348 1 MPNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 66 (357)
Q Consensus 1 ~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~df 66 (357)
++||+|.++|... ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+||
T Consensus 93 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~~kl~Df 171 (309)
T d1fvra_ 93 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADF 171 (309)
T ss_dssp CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCT
T ss_pred cCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCceEEccc
Confidence 5799999999643 2367999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC---CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCC-CCcchhHHhhhccccccccccccCC
Q 018348 67 GLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNLQMLTDSCLEGQ 142 (357)
Q Consensus 67 g~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (357)
|+++..... ....||..|+|||.+.++.++.++||||||+++|||++|..| +.......+...... ..+..
T Consensus 172 G~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~-----~~~~~ 246 (309)
T d1fvra_ 172 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----GYRLE 246 (309)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG-----TCCCC
T ss_pred cccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHh-----cCCCC
Confidence 998765433 234689999999999999999999999999999999997654 444333322222111 12234
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccCC
Q 018348 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183 (357)
Q Consensus 143 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~~ 183 (357)
.+..+++.+.+||.+||+.||++|||+.+|++.|+++....
T Consensus 247 ~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~ 287 (309)
T d1fvra_ 247 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 287 (309)
T ss_dssp CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 45567789999999999999999999999999999887543
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.3e-35 Score=267.12 Aligned_cols=168 Identities=22% Similarity=0.246 Sum_probs=135.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC--CCc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 78 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~--~~~ 78 (357)
++||+|.++|. +...+++..+..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ...
T Consensus 89 ~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~ 165 (364)
T d1omwa3 89 MNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 165 (364)
T ss_dssp CCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSC
T ss_pred cCCCcHHHHHH--hcccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeecCCCccccc
Confidence 57999999996 4568999999999999999999999999 999999999999999999999999999876544 345
Q ss_pred cCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 018348 79 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 157 (357)
Q Consensus 79 ~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 157 (357)
.||+.|+|||++.. ..++.++|||||||++|||+||+.||........... ..... ......+..+++.+.+||.+
T Consensus 166 ~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~-~~~~~--~~~~~~~~~~s~~~~~li~~ 242 (364)
T d1omwa3 166 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTL--TMAVELPDSFSPELRSLLEG 242 (364)
T ss_dssp CSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHH-HHHSS--SCCCCCCSSSCHHHHHHHHH
T ss_pred ccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcc--cCCCCCCCCCCHHHHHHHHH
Confidence 79999999999975 4589999999999999999999999865322111000 00001 11123344566889999999
Q ss_pred hhhcCCCCCCC-----hhhHHH
Q 018348 158 CLQYEPRERPN-----PKSLVT 174 (357)
Q Consensus 158 cl~~~p~~Rps-----~~~i~~ 174 (357)
||+.||++||| +++++.
T Consensus 243 ~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 243 LLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp HTCSSTTTSTTTSSSTHHHHHT
T ss_pred HcccCHHHhCCCcccCHHHHHc
Confidence 99999999999 466654
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-35 Score=261.57 Aligned_cols=165 Identities=21% Similarity=0.305 Sum_probs=138.5
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||+|.++|. ..+.+++..+..++.||+.||.|||+++ ++||||||+|||++.+|.+||+|||+++..... .
T Consensus 85 ~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~ 161 (320)
T d1xjda_ 85 LNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 161 (320)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred cCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhccccccccc
Confidence 58999999996 4568999999999999999999999999 999999999999999999999999999865432 2
Q ss_pred CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHH
Q 018348 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 156 (357)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||.+............. ...+|..+++++.+||+
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~dli~ 235 (320)
T d1xjda_ 162 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAKDLLV 235 (320)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred ccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHHHHH
Confidence 456899999999999999999999999999999999999999765544332222111 12334456688999999
Q ss_pred HhhhcCCCCCCChh-hHHH
Q 018348 157 RCLQYEPRERPNPK-SLVT 174 (357)
Q Consensus 157 ~cl~~~p~~Rps~~-~i~~ 174 (357)
+||+.||++|||+. ++++
T Consensus 236 ~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 236 KLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp HHSCSSGGGSBTTBSCGGG
T ss_pred HhcccCCCCCcCHHHHHHh
Confidence 99999999999996 6754
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-35 Score=259.44 Aligned_cols=169 Identities=17% Similarity=0.182 Sum_probs=136.8
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC----CeEEecCCCccccCCC-
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSRDG- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~----~~kl~dfg~~~~~~~~- 75 (357)
++||+|.++|. +.+++++..+..++.|++.||.|||+.+ |+||||||+||+++.++ .+|++|||+++.....
T Consensus 95 ~~gg~L~~~i~--~~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~ 171 (293)
T d1jksa_ 95 VAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 171 (293)
T ss_dssp CCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC
T ss_pred CCCccccchhc--cccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhhhcCCCc
Confidence 58999999996 3568999999999999999999999999 99999999999998776 4999999999876543
Q ss_pred --CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
....||+.|+|||++.+..++.++|||||||++|||++|..||................. ......+..++..+.+
T Consensus 172 ~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~ 249 (293)
T d1jksa_ 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSALAKD 249 (293)
T ss_dssp BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTSCHHHHH
T ss_pred cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--CCCchhcCCCCHHHHH
Confidence 245689999999999988899999999999999999999999876543332211111110 0111112334578999
Q ss_pred HHHHhhhcCCCCCCChhhHHH
Q 018348 154 LASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps~~~i~~ 174 (357)
||.+||+.||++|||+.+++.
T Consensus 250 li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 250 FIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp HHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999986
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=8.3e-35 Score=254.75 Aligned_cols=169 Identities=20% Similarity=0.209 Sum_probs=137.9
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CC
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 77 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~ 77 (357)
++||||.++|. ..+++++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ..
T Consensus 92 ~~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 168 (277)
T d1phka_ 92 MKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 168 (277)
T ss_dssp CTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCC
T ss_pred CCCchHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccchheeEccCCCceee
Confidence 57999999996 3568999999999999999999999999 999999999999999999999999999876543 34
Q ss_pred ccCCCCCCchhhhcC------CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHH
Q 018348 78 YSTNLAFTPPEYLRT------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 151 (357)
Q Consensus 78 ~~gt~~y~aPE~~~~------~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (357)
..||..|++||.+.+ ..++.++||||+||++|+|++|+.||...............-. .........+++++
T Consensus 169 ~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~ 246 (277)
T d1phka_ 169 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--QFGSPEWDDYSDTV 246 (277)
T ss_dssp CCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTTGGGSCHHH
T ss_pred eeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCC--CCCCcccccCCHHH
Confidence 568999999999864 2468899999999999999999999877644332222211111 11222334566899
Q ss_pred HHHHHHhhhcCCCCCCChhhHHH
Q 018348 152 VRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 152 ~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.+++.+||+.||.+|||+.+|++
T Consensus 247 ~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 247 KDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHccCChhHCcCHHHHHc
Confidence 99999999999999999999865
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-35 Score=258.51 Aligned_cols=178 Identities=15% Similarity=0.179 Sum_probs=135.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc--------CCCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS--------KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--------~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
|++|+|.++|.. .+++|..++.++.|++.||.|||+ ++ |+||||||+||||+.+|.+||+|||+++..
T Consensus 83 ~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~ 158 (303)
T d1vjya_ 83 HEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCccccc
Confidence 579999999953 479999999999999999999997 46 999999999999999999999999998765
Q ss_pred CCC--------CCccCCCCCCchhhhcCC------CCCCcccchhHHHHHHHHHcCCCCCCcchh---------------
Q 018348 73 RDG--------KSYSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSGKHIPPSHAL--------------- 123 (357)
Q Consensus 73 ~~~--------~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~vl~el~~g~~~~~~~~~--------------- 123 (357)
... ....||+.|+|||++.+. .++.++|||||||++|||+||..|+.....
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T d1vjya_ 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH
Confidence 332 234689999999998753 257799999999999999999866532110
Q ss_pred HHhhhccccccccccccCC-CCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 124 DLIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
.............+.+... .+......+.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus 239 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence 1111111111111111111 1234556799999999999999999999999999887644
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-34 Score=258.96 Aligned_cols=176 Identities=19% Similarity=0.274 Sum_probs=139.9
Q ss_pred CCCccHHhhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEe
Q 018348 1 MPNETLAKHLFHWE----------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 64 (357)
Q Consensus 1 ~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~ 64 (357)
++||+|.++|.... ...+++..+..|+.||+.||.|||+++ ++||||||+||+++.++.+|++
T Consensus 109 ~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~~~~ki~ 187 (311)
T d1t46a_ 109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKIC 187 (311)
T ss_dssp CTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEEEEC
T ss_pred CCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccccccccccccCccccc
Confidence 57999999996432 236899999999999999999999999 9999999999999999999999
Q ss_pred cCCCccccCCCC------CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCC-cchhHHhhhccccccccc
Q 018348 65 TFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDS 137 (357)
Q Consensus 65 dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~-~~~~~~~~~~~~~~~~~~ 137 (357)
|||+++...... ...||+.|+|||++.++.++.++||||||+++|||+|++.|+. ....... ...+...
T Consensus 188 DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~----~~~~i~~ 263 (311)
T d1t46a_ 188 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK----FYKMIKE 263 (311)
T ss_dssp CCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH----HHHHHHH
T ss_pred ccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH----HHHHHhc
Confidence 999998765432 2357899999999998899999999999999999999554443 3211110 0111112
Q ss_pred cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 138 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
..+...+..++..+.+||.+||+.||.+|||+.+|+++|++...
T Consensus 264 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 264 GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence 22333445566889999999999999999999999999987543
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-34 Score=253.65 Aligned_cols=175 Identities=18% Similarity=0.252 Sum_probs=140.3
Q ss_pred CCCccHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCcccc
Q 018348 1 MPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 72 (357)
Q Consensus 1 ~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~ 72 (357)
+++|+|.+++.... ...+++..+..|+.|++.||.|||+++ |+||||||+|||++.++++||+|||+++..
T Consensus 105 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFGla~~~ 183 (308)
T d1p4oa_ 105 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 183 (308)
T ss_dssp CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred cCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeecccceec
Confidence 57999999986431 245799999999999999999999999 999999999999999999999999998865
Q ss_pred CCC------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCC-CCCcchhHHhhhccccccccccccCCCCc
Q 018348 73 RDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDSCLEGQFTD 145 (357)
Q Consensus 73 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (357)
... ....||+.|++||.+.++.++.++||||||+++|||+||.. |+............... .....+.
T Consensus 184 ~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~-----~~~~~p~ 258 (308)
T d1p4oa_ 184 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG-----GLLDKPD 258 (308)
T ss_dssp GGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT-----CCCCCCT
T ss_pred cCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC-----CCCCCcc
Confidence 432 22357899999999999999999999999999999999864 44443322222111111 1223345
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
.+++.+.++|.+||+.||++|||+.+|++.|+....
T Consensus 259 ~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 259 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 566889999999999999999999999999987744
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-33 Score=251.25 Aligned_cols=171 Identities=17% Similarity=0.199 Sum_probs=133.1
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCc
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSY 78 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~ 78 (357)
++|++.... ......+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 98 ~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~ 175 (305)
T d1blxa_ 98 DQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 175 (305)
T ss_dssp SCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCC
T ss_pred cCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCc
Confidence 455554443 335678999999999999999999999999 999999999999999999999999998765433 356
Q ss_pred cCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc------------------c---cccc
Q 018348 79 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------------------M---LTDS 137 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~------------------~---~~~~ 137 (357)
.||+.|+|||++.+..++.++||||+||++|||++|..||.............. . ....
T Consensus 176 ~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (305)
T d1blxa_ 176 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 255 (305)
T ss_dssp CCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCC
T ss_pred ccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccc
Confidence 789999999999989999999999999999999999999876432211110000 0 0000
Q ss_pred cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 138 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
......+...++.+.+|+.+||+.||++|||+.+++.
T Consensus 256 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 256 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp CCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0011223345678999999999999999999999986
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-34 Score=250.65 Aligned_cols=157 Identities=23% Similarity=0.384 Sum_probs=130.0
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-CCCeEEecCCCccccCCC--CCcc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG--KSYS 79 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-~~~~kl~dfg~~~~~~~~--~~~~ 79 (357)
+++|.+++. +.+.+++..+..|+.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... .+..
T Consensus 94 ~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~ 170 (273)
T d1xwsa_ 94 VQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 170 (273)
T ss_dssp EEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCC
T ss_pred cchHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECccccceecccccccccc
Confidence 368888885 3568999999999999999999999999 999999999999985 478999999999865543 3567
Q ss_pred CCCCCCchhhhcCCCC-CCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 018348 80 TNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 158 (357)
||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...... .. . ...++..+++++.++|.+|
T Consensus 171 GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i-~~-~----------~~~~~~~~s~~~~~li~~~ 238 (273)
T d1xwsa_ 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IR-G----------QVFFRQRVSSECQHLIRWC 238 (273)
T ss_dssp SCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-HH-C----------CCCCSSCCCHHHHHHHHHH
T ss_pred cCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHH-hh-c----------ccCCCCCCCHHHHHHHHHH
Confidence 9999999999987664 67899999999999999999888654221 11 1 1122334557899999999
Q ss_pred hhcCCCCCCChhhHHH
Q 018348 159 LQYEPRERPNPKSLVT 174 (357)
Q Consensus 159 l~~~p~~Rps~~~i~~ 174 (357)
|+.||++|||+++++.
T Consensus 239 L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 239 LALRPSDRPTFEEIQN 254 (273)
T ss_dssp TCSSGGGSCCHHHHHT
T ss_pred ccCCHhHCcCHHHHhc
Confidence 9999999999999986
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-33 Score=250.93 Aligned_cols=171 Identities=20% Similarity=0.204 Sum_probs=130.4
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~ 76 (357)
++||++..++. .+..+++..+..++.||+.||+|||+++ ++||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence 35666665553 4678999999999999999999999999 999999999999999999999999999766543 2
Q ss_pred CccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc--------------ccccccccC
Q 018348 77 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------MLTDSCLEG 141 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~ 141 (357)
...||+.|+|||++.+. .++.++|||||||++|||++|..||.............. .........
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 45689999999998765 478999999999999999999988865432211100000 000000000
Q ss_pred --------CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 142 --------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 142 --------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
......++.+.+|+.+||+.||++|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence 011234578999999999999999999999976
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.1e-33 Score=252.96 Aligned_cols=170 Identities=16% Similarity=0.220 Sum_probs=136.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC--CCCeEEecCCCccccCCCC--
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK-- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~--~~~~kl~dfg~~~~~~~~~-- 76 (357)
++||+|.++|.. .+..+++.++..|+.||+.||.|||+++ |+||||||+|||++. .+.+||+|||+++......
T Consensus 83 ~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~ 160 (321)
T d1tkia_ 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence 578999999953 3457999999999999999999999999 999999999999984 4579999999998765543
Q ss_pred -CccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHHHH
Q 018348 77 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155 (357)
Q Consensus 77 -~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 155 (357)
...+|+.|++||.+.+..++.++|||||||++|+|++|..||.................. ........+++++.+||
T Consensus 161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li 238 (321)
T d1tkia_ 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--FDEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCHHHHTTSCHHHHHHH
T ss_pred cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CChhhccCCCHHHHHHH
Confidence 346899999999999888999999999999999999999998765443322221111100 01111123457899999
Q ss_pred HHhhhcCCCCCCChhhHHH
Q 018348 156 SRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 156 ~~cl~~~p~~Rps~~~i~~ 174 (357)
.+||+.||++|||+.+++.
T Consensus 239 ~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 239 DRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999986
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.98 E-value=2.8e-33 Score=248.52 Aligned_cols=178 Identities=15% Similarity=0.120 Sum_probs=135.1
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeC---CCCCeEEecCCCccccCCC---
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG--- 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~---~~~~~kl~dfg~~~~~~~~--- 75 (357)
-+|+|.+.+.. ..+.+++..+..++.|++.||+|||+++ |+||||||+||+++ .+..+|++|||+++.....
T Consensus 85 ~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 85 LGPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp CCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred cCCchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 36777777643 4678999999999999999999999999 99999999999985 3557999999999865432
Q ss_pred --------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc--ccccccccCCCCc
Q 018348 76 --------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--MLTDSCLEGQFTD 145 (357)
Q Consensus 76 --------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 145 (357)
....||+.|||||++.+..++.++|||||||++|||++|..||.............. .............
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTT
T ss_pred cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhcc
Confidence 234689999999999988899999999999999999999998865322111110000 0000000011123
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHHHhccccc
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~ 181 (357)
.+++++.+++.+||+.||++||++.++.+.|+.+..
T Consensus 243 ~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence 455789999999999999999999999988877643
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.97 E-value=9.5e-33 Score=244.04 Aligned_cols=179 Identities=12% Similarity=0.082 Sum_probs=137.9
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCC-----CCCeEEecCCCccccCCC-
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRDG- 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~-----~~~~kl~dfg~~~~~~~~- 75 (357)
.+|+|.+++.. .+..+++.++..|+.|++.||+|||+++ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 83 ~~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (293)
T d1csna_ 83 LGPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160 (293)
T ss_dssp CCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred cCCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence 47899999854 4568999999999999999999999999 999999999999964 578999999999865322
Q ss_pred ----------CCccCCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhh--ccccccccccccCCC
Q 018348 76 ----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD--RNLQMLTDSCLEGQF 143 (357)
Q Consensus 76 ----------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 143 (357)
....||+.|||||++.+..++.++||||||+++|||++|..||.......... ...............
T Consensus 161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (293)
T d1csna_ 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240 (293)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh
Confidence 23468999999999998889999999999999999999999986432110000 000000000000111
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCCChhhHHHHhcccccC
Q 018348 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182 (357)
Q Consensus 144 ~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~L~~~~~~ 182 (357)
...+++++.+++..|+..+|++||+++.+.+.|+.+...
T Consensus 241 ~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~ 279 (293)
T d1csna_ 241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279 (293)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHH
Confidence 223457899999999999999999999999888776544
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.6e-32 Score=240.98 Aligned_cols=172 Identities=19% Similarity=0.290 Sum_probs=130.9
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
+|++.+++.....+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 84 ~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~ 162 (298)
T d1gz8a_ 84 HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162 (298)
T ss_dssp SEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCC
T ss_pred CCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcccceee
Confidence 456666665556778999999999999999999999999 999999999999999999999999998766433 234
Q ss_pred cCCCCCCchhhhcCCC-CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-----------c---ccccc--ccccC
Q 018348 79 STNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------L---QMLTD--SCLEG 141 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-----------~---~~~~~--~~~~~ 141 (357)
.||+.|+|||.+.... .+.++|||||||++|+|++|+.||............ . ..... .....
T Consensus 163 ~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T d1gz8a_ 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242 (298)
T ss_dssp BCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCC
T ss_pred cccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccccccc
Confidence 6899999999987655 578999999999999999999998654321110000 0 00000 00000
Q ss_pred -------CCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 142 -------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 142 -------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
......++.+.+++.+||+.||.+|||+.++++.
T Consensus 243 ~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 243 WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp CCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0012344678999999999999999999999873
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.7e-32 Score=245.87 Aligned_cols=171 Identities=19% Similarity=0.282 Sum_probs=131.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
+.||+|.+++. .+++++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~~~g~L~~~l~---~~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~ 167 (345)
T d1pmea_ 92 LMGADLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 167 (345)
T ss_dssp CCCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCC
T ss_pred ecCCchhhhhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccCCCccce
Confidence 36899999995 457999999999999999999999999 999999999999999999999999998764332
Q ss_pred --CCccCCCCCCchhhhcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccc------------------
Q 018348 76 --KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML------------------ 134 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~------------------ 134 (357)
...+||+.|+|||++.. ..++.++||||+||++|+|++|..||................
T Consensus 168 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T d1pmea_ 168 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 247 (345)
T ss_dssp TTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHH
T ss_pred eeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhc
Confidence 23468999999999855 457889999999999999999999886532211110000000
Q ss_pred ----cccccc---CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 135 ----TDSCLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 135 ----~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
...... ....+..++.+.+++.+||+.||.+|||+.++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 248 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000000 00112334678999999999999999999999863
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.97 E-value=7.1e-32 Score=237.83 Aligned_cols=169 Identities=17% Similarity=0.253 Sum_probs=126.8
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC----CCc
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 78 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----~~~ 78 (357)
++++..+.. ..+.+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+|++|||.+...... ...
T Consensus 84 ~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (286)
T d1ob3a_ 84 QDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160 (286)
T ss_dssp EEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred hhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCcccccee
Confidence 444444443 4678999999999999999999999999 999999999999999999999999998765443 234
Q ss_pred cCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-----------cc------------cc
Q 018348 79 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQ------------ML 134 (357)
Q Consensus 79 ~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-----------~~------------~~ 134 (357)
.+++.|++||.+.+. .++.++|||||||++|||++|+.||............ .. ..
T Consensus 161 ~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
T d1ob3a_ 161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240 (286)
T ss_dssp -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred cccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccccc
Confidence 688999999999764 4689999999999999999999998653211110000 00 00
Q ss_pred ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 135 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 135 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.............++.+.+++.+||+.||++|||++++++
T Consensus 241 ~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0001111223345678999999999999999999999974
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.3e-31 Score=241.04 Aligned_cols=165 Identities=23% Similarity=0.282 Sum_probs=127.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-CeEEecCCCccccCCC---CCccCCCCCCchhh
Q 018348 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEY 89 (357)
Q Consensus 14 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-~~kl~dfg~~~~~~~~---~~~~gt~~y~aPE~ 89 (357)
....+++..+..|+.||+.||+|||+++ |+||||||+|||++.++ .+||+|||+++..... .+..||..|+|||.
T Consensus 115 ~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~ 193 (350)
T d1q5ka_ 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193 (350)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHH
Confidence 4568999999999999999999999999 99999999999999775 8999999998876543 35578999999998
Q ss_pred hcC-CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc-----------------------ccccccccccCCCCc
Q 018348 90 LRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------------------LQMLTDSCLEGQFTD 145 (357)
Q Consensus 90 ~~~-~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~ 145 (357)
+.+ ..++.++||||+||++|||++|..||............ ...............
T Consensus 194 ~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (350)
T d1q5ka_ 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 273 (350)
T ss_dssp HTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCT
T ss_pred hhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhccc
Confidence 875 46899999999999999999999888654321110000 000000111111233
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCChhhHHH--Hhccc
Q 018348 146 DDGTELVRLASRCLQYEPRERPNPKSLVT--ALSPL 179 (357)
Q Consensus 146 ~~~~~l~~li~~cl~~~p~~Rps~~~i~~--~L~~~ 179 (357)
..++.+.+|+.+||+.||.+|||+.++++ .++.+
T Consensus 274 ~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 274 RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 45678999999999999999999999986 34444
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=7.9e-32 Score=240.87 Aligned_cols=169 Identities=20% Similarity=0.281 Sum_probs=132.1
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 75 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~----- 75 (357)
++||+|.+++. ..+.++...+..++.||+.||.|||+++ ++||||||+||+++.+|.+||+|||+++.....
T Consensus 111 ~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~ 187 (322)
T d1vzoa_ 111 INGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA 187 (322)
T ss_dssp CCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGG
T ss_pred ccccHHHHHHH--hcccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhhcccccccc
Confidence 57899999996 4567889999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCCCCchhhhcCC--CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhccccccccccccCCCCchhHHHHHH
Q 018348 76 KSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 153 (357)
Q Consensus 76 ~~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (357)
.+..|++.|++||.+.+. .++.++|||||||++|+|++|..||.................. .....+..+++.+.+
T Consensus 188 ~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~ 265 (322)
T d1vzoa_ 188 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQEMSALAKD 265 (322)
T ss_dssp CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCTTSCHHHHH
T ss_pred cccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc--CCCCCcccCCHHHHH
Confidence 245689999999999764 4688999999999999999999998654322111111111111 112334456789999
Q ss_pred HHHHhhhcCCCCCCC-----hhhHHH
Q 018348 154 LASRCLQYEPRERPN-----PKSLVT 174 (357)
Q Consensus 154 li~~cl~~~p~~Rps-----~~~i~~ 174 (357)
++.+||+.||.+||| ++++++
T Consensus 266 li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 266 LIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp HHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred HHHHHcccCHHHcCCCCcccHHHHHc
Confidence 999999999999996 566654
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.8e-31 Score=235.03 Aligned_cols=170 Identities=18% Similarity=0.193 Sum_probs=125.7
Q ss_pred CCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC------
Q 018348 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------ 75 (357)
Q Consensus 2 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~------ 75 (357)
+++++..+.. ....++...+..|+.|++.||.|||+.+ |+||||||+|||++.++.+|++|||+++.....
T Consensus 100 ~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~ 176 (318)
T d3blha1 100 EHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 176 (318)
T ss_dssp CEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CC
T ss_pred CCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecceeeecccccccccc
Confidence 3445544432 4568999999999999999999999999 999999999999999999999999998765432
Q ss_pred --CCccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccc---ccc--------c---
Q 018348 76 --KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---TDS--------C--- 138 (357)
Q Consensus 76 --~~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~---~~~--------~--- 138 (357)
.+..||+.|+|||++.+. .++.++|||||||++|||++|+.||................ ... .
T Consensus 177 ~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 256 (318)
T d3blha1 177 RYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE 256 (318)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC----
T ss_pred cccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhh
Confidence 234689999999999765 57899999999999999999998886532211111100000 000 0
Q ss_pred -c--cCCCCc---------hhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 139 -L--EGQFTD---------DDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 139 -~--~~~~~~---------~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
. ...... ...+.+.+|+.+||+.||++|||+++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~ 304 (318)
T d3blha1 257 KLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304 (318)
T ss_dssp ---CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence 0 000000 11346778999999999999999999986
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5e-31 Score=238.64 Aligned_cols=168 Identities=17% Similarity=0.246 Sum_probs=130.6
Q ss_pred CccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCccCC
Q 018348 3 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTN 81 (357)
Q Consensus 3 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~gt 81 (357)
+++|.+++. .+++++..+..++.||+.||.|||+++ |+||||||+|||++.++.+|++|||+++..... ....||
T Consensus 106 ~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t 181 (346)
T d1cm8a_ 106 GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVT 181 (346)
T ss_dssp SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSC
T ss_pred cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceeccCCcccccccc
Confidence 456666663 467999999999999999999999999 999999999999999999999999999876554 346789
Q ss_pred CCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcc--------------------------cccc
Q 018348 82 LAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------------------LQML 134 (357)
Q Consensus 82 ~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~--------------------------~~~~ 134 (357)
+.|+|||.+.+. .++.++||||+||++|+|++|..||............ ....
T Consensus 182 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (346)
T d1cm8a_ 182 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL 261 (346)
T ss_dssp GGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC
T ss_pred ccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcc
Confidence 999999998764 5689999999999999999999888653211110000 0000
Q ss_pred ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHHH
Q 018348 135 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 175 (357)
Q Consensus 135 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~~ 175 (357)
..... .......++.+.+||.+||+.||++|||+.+++..
T Consensus 262 ~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 262 EKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp CCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccch-HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 11223345788999999999999999999999873
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.2e-30 Score=236.47 Aligned_cols=169 Identities=16% Similarity=0.236 Sum_probs=128.3
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC-CCcc
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~-~~~~ 79 (357)
+.||+|.+++. .+++++..+..|+.||+.||.|||+++ |+||||||+|||++.+|.+|++|||++...... .+..
T Consensus 104 ~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~ 179 (348)
T d2gfsa1 104 LMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 179 (348)
T ss_dssp CCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSC
T ss_pred ecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhcccCccccccc
Confidence 46899999994 457999999999999999999999999 999999999999999999999999998765433 3556
Q ss_pred CCCCCCchhhhcCCC-CCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccccc------------------------
Q 018348 80 TNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML------------------------ 134 (357)
Q Consensus 80 gt~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~~~------------------------ 134 (357)
||..|+|||.+.+.. .+.++|||||||++|+|++|..||.+..............
T Consensus 180 g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (348)
T d2gfsa1 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 259 (348)
T ss_dssp HHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSC
T ss_pred ccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcc
Confidence 889999999877654 6889999999999999999999886542211111100000
Q ss_pred --ccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 135 --TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 135 --~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
...... ......++.+.+||.+||+.||.+|||+.+++.
T Consensus 260 ~~~~~~~~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~ 300 (348)
T d2gfsa1 260 QMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300 (348)
T ss_dssp CCCCCCHH-HHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCCCcchh-hhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence 000000 001234567899999999999999999999986
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.96 E-value=3.3e-30 Score=231.51 Aligned_cols=168 Identities=17% Similarity=0.225 Sum_probs=127.6
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCC-CeEEecCCCccccCCC---C
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---K 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~-~~kl~dfg~~~~~~~~---~ 76 (357)
+++|+|.++. +.+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... .
T Consensus 114 ~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~ 187 (328)
T d3bqca1 114 VNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 187 (328)
T ss_dssp CCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCC
T ss_pred cCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceeccCCCccc
Confidence 4677877654 36999999999999999999999999 99999999999998655 5899999999876543 3
Q ss_pred CccCCCCCCchhhhcCC-CCCCcccchhHHHHHHHHHcCCCCCCcchhHH------------------hhhcccc-----
Q 018348 77 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL------------------IRDRNLQ----- 132 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~------------------~~~~~~~----- 132 (357)
...+|..|+|||.+.+. .++.++||||+||++++|++|+.||....... .......
T Consensus 188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 267 (328)
T d3bqca1 188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 267 (328)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGG
T ss_pred ccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCccc
Confidence 45689999999998865 47999999999999999999998875421100 0000000
Q ss_pred -c--------cccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 133 -M--------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 133 -~--------~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
. .............+++++.+||++||+.||.+|||++++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 268 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp GGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred chhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 00001111122335578999999999999999999999986
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.2e-30 Score=226.52 Aligned_cols=171 Identities=15% Similarity=0.202 Sum_probs=130.2
Q ss_pred CCCccHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCC----
Q 018348 1 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 76 (357)
Q Consensus 1 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~---- 76 (357)
+.|++|..++. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.++......
T Consensus 83 ~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~ 159 (292)
T d1unla_ 83 CDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159 (292)
T ss_dssp CSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCC
T ss_pred ccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCccce
Confidence 35778887775 5678999999999999999999999999 9999999999999999999999999998765432
Q ss_pred CccCCCCCCchhhhcCCC-CCCcccchhHHHHHHHHHcCCCCCCcchh-HH-hhh------c----c---------c---
Q 018348 77 SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHAL-DL-IRD------R----N---------L--- 131 (357)
Q Consensus 77 ~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~~~~~~~~-~~-~~~------~----~---------~--- 131 (357)
...++..|+|||.+.+.. ++.++|||||||++|||++|+.||..... .. ... . . .
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (292)
T d1unla_ 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccc
Confidence 334678899999988655 68999999999999999999988633111 00 000 0 0 0
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
................++.+.+|+.+||+.||.+|||++++++
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000000111223345578899999999999999999999876
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3.4e-29 Score=227.14 Aligned_cols=158 Identities=16% Similarity=0.235 Sum_probs=116.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCC---CCccCCCCCCchhhhcC
Q 018348 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT 92 (357)
Q Consensus 16 ~~l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~---~~~~gt~~y~aPE~~~~ 92 (357)
..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+|++|||+++..... ....+|+.|+|||++.+
T Consensus 114 ~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~ 192 (355)
T d2b1pa1 114 MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192 (355)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------------CCTTCCHHHHTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhccccccccccccccccccChhhhcC
Confidence 46899999999999999999999999 999999999999999999999999987765543 34568999999999998
Q ss_pred CCCCCcccchhHHHHHHHHHcCCCCCCcchhHHhhhcccc----------------------------c-----cc-ccc
Q 018348 93 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ----------------------------M-----LT-DSC 138 (357)
Q Consensus 93 ~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~~~~~~~~----------------------------~-----~~-~~~ 138 (357)
..++.++||||+||++++|++|+.||.............. . .. ...
T Consensus 193 ~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (355)
T d2b1pa1 193 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL 272 (355)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGG
T ss_pred CCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccccccccccc
Confidence 8899999999999999999999988864321111100000 0 00 000
Q ss_pred cc--CCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 139 LE--GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 139 ~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
.. .......++.+.+|+.+||+.||++|||+++|++
T Consensus 273 ~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~ 310 (355)
T d2b1pa1 273 FPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310 (355)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00 0011234677899999999999999999999986
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=4.5e-28 Score=220.50 Aligned_cols=166 Identities=17% Similarity=0.270 Sum_probs=124.8
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCCCCeeeCCCCC------eEEecCCCccccCCC-CCcc
Q 018348 8 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGN------PRLSTFGLMKNSRDG-KSYS 79 (357)
Q Consensus 8 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~~~~H~dlk~~Nill~~~~~------~kl~dfg~~~~~~~~-~~~~ 79 (357)
..........+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++. ++++|||.+...... ....
T Consensus 112 ~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~ 190 (362)
T d1q8ya_ 112 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI 190 (362)
T ss_dssp HHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCC
T ss_pred cccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCcccccceeeEeeccccccccccccccc
Confidence 33333456789999999999999999999998 77 999999999999986553 899999998765443 3567
Q ss_pred CCCCCCchhhhcCCCCCCcccchhHHHHHHHHHcCCCCCCcchhHH----------------------hhhc--------
Q 018348 80 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----------------------IRDR-------- 129 (357)
Q Consensus 80 gt~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~~~~~~~~~~----------------------~~~~-------- 129 (357)
||+.|+|||++.+..++.++|+||+||++++|++|+.||....... ....
T Consensus 191 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 270 (362)
T d1q8ya_ 191 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFN 270 (362)
T ss_dssp SCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBC
T ss_pred ccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccc
Confidence 8999999999998889999999999999999999998875321100 0000
Q ss_pred ---cccccccc---------cccCCCCchhHHHHHHHHHHhhhcCCCCCCChhhHHH
Q 018348 130 ---NLQMLTDS---------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174 (357)
Q Consensus 130 ---~~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i~~ 174 (357)
....+... ......+...++.+.+|+.+||..||.+|||+.++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~ 327 (362)
T d1q8ya_ 271 SRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 327 (362)
T ss_dssp C--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred cchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000000 0112234456788999999999999999999999986
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=4.2e-22 Score=150.50 Aligned_cols=108 Identities=26% Similarity=0.362 Sum_probs=104.0
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
.+..++++|+.++..|+|++|+..|+++|+.+|+ ++.+|.++|.+|..+|++++|+.++.++++++|+++.+|+++|.+
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 80 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 80 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHH
Confidence 5678899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhccccccccccC
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+..+|+|++|+.+|+++++++|++..++.
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 109 (117)
T d1elwa_ 81 LEFLNRFEEAKRTYEEGLKHEANNPQLKE 109 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999999999999987653
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=3.4e-21 Score=159.32 Aligned_cols=108 Identities=23% Similarity=0.369 Sum_probs=103.7
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
.++.++++|+.+++.|+|++|+..|++||+++|+ ++.+|+++|.||..+|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhccccccccccC
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
|..+|+|++|+.+|++|++++|++...+.
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~~~~~ 110 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQRLNFG 110 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 99999999999999999999998776553
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=1e-20 Score=150.96 Aligned_cols=110 Identities=24% Similarity=0.307 Sum_probs=105.8
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
..+.++.++.+|+.+++.|+|++|+..|++||+++|+ +..+|+++|.||..+|++++|+.+|+++++++|++..+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 4578899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 324 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 324 g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
|.++..+|+|++|+.+|+++++++|++..++
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~ 115 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHDKDAK 115 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999999987653
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.81 E-value=7.8e-20 Score=144.67 Aligned_cols=113 Identities=19% Similarity=0.231 Sum_probs=104.1
Q ss_pred hhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc---------------hHHHhhHHHHHHhcCChHHHHHHH
Q 018348 242 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDA 306 (357)
Q Consensus 242 ~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 306 (357)
.++.+.+..++..|+.+|+.|+|++|+..|++||+.-+... ..+|+|+|.||.++|++++|++++
T Consensus 11 ~e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~ 90 (153)
T d2fbna1 11 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHA 90 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhh
Confidence 46778899999999999999999999999999998765421 247889999999999999999999
Q ss_pred HHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 307 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 307 ~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++||+++|.+.++|+++|.++..+|+|++|+.+|++|++++|++..++
T Consensus 91 ~~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~ 138 (153)
T d2fbna1 91 SKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 138 (153)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred hccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999998764
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=2.4e-19 Score=144.44 Aligned_cols=114 Identities=14% Similarity=0.121 Sum_probs=104.8
Q ss_pred hhhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc--------------hHHHhhHHHHHHhcCChHHHHHHH
Q 018348 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS--------------PTVYARRSLCYLMSDMPQDALNDA 306 (357)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~--------------~~~~~~~a~~~~~~~~~~~A~~~~ 306 (357)
..++++.+..++++|+.+|+.|+|++|+..|++||+..|... ..+|.|+|.||+++|++++|+.++
T Consensus 6 ~~ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~ 85 (170)
T d1p5qa1 6 SEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESC 85 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchh
Confidence 356778899999999999999999999999999999877621 256889999999999999999999
Q ss_pred HHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 307 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 307 ~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
++||+++|+++.+|+++|.+|+.+|+|++|+.+|++|++++|++..+.
T Consensus 86 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~ 133 (170)
T d1p5qa1 86 NKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 133 (170)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred hhhhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999987653
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.78 E-value=5.8e-19 Score=141.87 Aligned_cols=114 Identities=15% Similarity=0.164 Sum_probs=103.9
Q ss_pred hhhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc--------------chHHHhhHHHHHHhcCChHHHHHHH
Q 018348 241 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------------SPTVYARRSLCYLMSDMPQDALNDA 306 (357)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~ 306 (357)
..+++..++.++++|+.+++.|+|++|+..|++||..-+.. ...+|.|+|.||..+|++++|+.++
T Consensus 8 ~~E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~ 87 (168)
T d1kt1a1 8 TKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECC 87 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhh
Confidence 45677889999999999999999999999999999764441 1356889999999999999999999
Q ss_pred HHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 307 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 307 ~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+++++++|++.++|+++|.++..+|+|++|+.+|++|++++|++..++
T Consensus 88 ~~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~ 135 (168)
T d1kt1a1 88 DKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 135 (168)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHH
T ss_pred hhhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999997654
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.76 E-value=2.1e-18 Score=138.71 Aligned_cols=112 Identities=18% Similarity=0.224 Sum_probs=101.9
Q ss_pred hhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhc----------------CCCcchHHHhhHHHHHHhcCChHHHHHH
Q 018348 242 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA----------------GTMVSPTVYARRSLCYLMSDMPQDALND 305 (357)
Q Consensus 242 ~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~----------------~p~~~~~~~~~~a~~~~~~~~~~~A~~~ 305 (357)
......+..++..|+.++..|+|++|+..|++||+. +|. ...++.|+|.||.++|++++|+.+
T Consensus 21 ~~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~~ 99 (169)
T d1ihga1 21 DKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDS 99 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhhh
Confidence 344566778899999999999999999999999864 445 567899999999999999999999
Q ss_pred HHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 306 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 306 ~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+.
T Consensus 100 ~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~ 148 (169)
T d1ihga1 100 CLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 148 (169)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999999999999999999999987654
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=2.8e-18 Score=131.32 Aligned_cols=104 Identities=13% Similarity=0.085 Sum_probs=96.6
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCch-------H
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-------I 318 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-------~ 318 (357)
+.|..++++|+.++..|+|++|+.+|+++|+++|+ +..++.++|.||..+|++++|+.++++||+++|++. .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 45788999999999999999999999999999999 899999999999999999999999999999999875 4
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 319 ASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 319 a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
+|+++|.++..++++++|+.+|++++.+++..
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 112 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRTP 112 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCH
Confidence 67788889999999999999999999887653
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.73 E-value=6.8e-18 Score=125.91 Aligned_cols=98 Identities=12% Similarity=0.049 Sum_probs=93.8
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
......++.|..++++|++++|+..|+++|+++|+ ++.+|.++|.++..+|++++|+.+++++++++|++..+|+.+|.
T Consensus 14 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~ 92 (112)
T d1hxia_ 14 MYHENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAV 92 (112)
T ss_dssp GGCSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHH
Confidence 34556688999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhh
Q 018348 326 ALSAMGMENEAQVALKEGT 344 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al 344 (357)
+|..+|++++|+++|+++|
T Consensus 93 ~y~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 93 SHTNEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHh
Confidence 9999999999999999986
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=2.6e-17 Score=140.90 Aligned_cols=107 Identities=13% Similarity=-0.011 Sum_probs=103.0
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+..++.+|..++..|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|
T Consensus 34 ~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 112 (259)
T d1xnfa_ 34 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 112 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHH
Confidence 356788999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
.++..+|++++|+..|+++++++|++..
T Consensus 113 ~~~~~~g~~~~A~~~~~~al~~~p~~~~ 140 (259)
T d1xnfa_ 113 IALYYGGRDKLAQDDLLAFYQDDPNDPF 140 (259)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHhhHHHHHHHHHHHHhhccccHH
Confidence 9999999999999999999999998764
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=8e-17 Score=132.02 Aligned_cols=101 Identities=14% Similarity=0.088 Sum_probs=93.6
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
++..++++|..++..|+|++|++.|+++ .+. ++.+|+|+|.+|..+|++++|+++|++||+++|+++.+|+++|.+
T Consensus 4 ~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~~ 79 (192)
T d1hh8a_ 4 EAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 79 (192)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 5667889999999999999999999864 455 678999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhccccccc
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
+.++|+|++|+.+|++|++..+.+.
T Consensus 80 ~~~~g~~~~A~~~~~kAl~~~~~n~ 104 (192)
T d1hh8a_ 80 YYQTEKYDLAIKDLKEALIQLRGNQ 104 (192)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHhhccHHHHHHHHHHHHHhCccCc
Confidence 9999999999999999999877665
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=2.9e-17 Score=124.04 Aligned_cols=102 Identities=10% Similarity=-0.022 Sum_probs=92.8
Q ss_pred HHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcC---ChHHHHHHHHHHHHhCCCc--hHHHHHHHHH
Q 018348 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIISPIW--HIASYLQAAA 326 (357)
Q Consensus 252 ~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~l~p~~--~~a~~~~g~~ 326 (357)
.+.++.+...+++++|++.|++++.++|+ ++.+++|+|.|+.+.+ ++++|+..+++++..+|.. ..+|+++|.+
T Consensus 3 ~~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~ 81 (122)
T d1nzna_ 3 EAVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVG 81 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 35678899999999999999999999999 9999999999998754 5567999999999999866 4589999999
Q ss_pred HHHcCChHHHHHHHHHhhcccccccccc
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
|+.+|+|++|+++|+++|+++|++..|.
T Consensus 82 y~~~g~~~~A~~~~~~aL~~~P~~~~A~ 109 (122)
T d1nzna_ 82 NYRLKEYEKALKYVRGLLQTEPQNNQAK 109 (122)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHhCcCCHHHH
Confidence 9999999999999999999999998764
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.64 E-value=4.4e-16 Score=123.13 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=95.3
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc-----------hHHHhhHHHHHHhcCChHHHHHHHHHHHHhC
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-----------PTVYARRSLCYLMSDMPQDALNDAMQAQIIS 313 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~ 313 (357)
...+..+...|+.++..|+|++|+..|++||++.|+.. +.+|.|+|.+|..+|++++|+.++++++++.
T Consensus 6 ~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~ 85 (156)
T d2hr2a1 6 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 85 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcc
Confidence 34455566779999999999999999999999988721 3579999999999999999999999999876
Q ss_pred CC-----------chHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 314 PI-----------WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 314 p~-----------~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
|. ...+|+++|.+|..+|++++|+.+|++|+++.|+.....
T Consensus 86 ~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~~~~ 137 (156)
T d2hr2a1 86 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGET 137 (156)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCC
T ss_pred cccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhhchH
Confidence 53 355899999999999999999999999999999876543
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.8e-15 Score=123.80 Aligned_cols=104 Identities=16% Similarity=0.107 Sum_probs=96.2
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc----------
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---------- 316 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---------- 316 (357)
.+..++++|..++..|+|++|+..|++||+++|+ .+.+|+++|.+|.++|++++|+++|++|+...+.+
T Consensus 35 ~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~ 113 (192)
T d1hh8a_ 35 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 113 (192)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhh
Confidence 4567899999999999999999999999999999 89999999999999999999999999999876543
Q ss_pred ------hHHHHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 317 ------HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 317 ------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
.++++++|.++..+|++++|++.|++|+++.|+..
T Consensus 114 ~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~~ 154 (192)
T d1hh8a_ 114 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 154 (192)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred hcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcc
Confidence 47899999999999999999999999999988754
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.62 E-value=1.1e-16 Score=125.04 Aligned_cols=99 Identities=12% Similarity=0.046 Sum_probs=88.7
Q ss_pred hHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhc----------CChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 256 DVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS----------DMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 256 ~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~----------~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+-+.+.|++|+..|++|++++|+ ++.+++++|.++..+ +.+++|+..|++|++++|+++.+|+++|.
T Consensus 5 ~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~ 83 (145)
T d1zu2a1 5 TEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGN 83 (145)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHHH
Confidence 3455677899999999999999999 999999999999854 45689999999999999999999999999
Q ss_pred HHHHcCC-----------hHHHHHHHHHhhccccccccccC
Q 018348 326 ALSAMGM-----------ENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 326 ~~~~~g~-----------~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+|..+|+ |++|+++|++|++++|++..++.
T Consensus 84 ~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~ 124 (145)
T d1zu2a1 84 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 124 (145)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHH
Confidence 9998864 79999999999999999876553
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=1.6e-15 Score=133.82 Aligned_cols=107 Identities=12% Similarity=0.153 Sum_probs=99.7
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
.+..+...|..+...|++++|+..|++++..+|+ ++.+|.++|.+|..+|++++|++.|+++++++|+++.+|+++|.+
T Consensus 171 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 249 (323)
T d1fcha_ 171 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 249 (323)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 3566788999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHhhcccccccccc
Q 018348 327 LSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 327 ~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
|..+|++++|+..|++|++++|++..++
T Consensus 250 ~~~~g~~~~A~~~~~~al~l~p~~~~~~ 277 (323)
T d1fcha_ 250 CINLGAHREAVEHFLEALNMQRKSRGPR 277 (323)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC----
T ss_pred HHHCCCHHHHHHHHHHHHHhCCcChhhh
Confidence 9999999999999999999999987654
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=2.4e-15 Score=132.84 Aligned_cols=113 Identities=10% Similarity=-0.020 Sum_probs=105.6
Q ss_pred hhhhHhhHHHHHHHhHHHhcc-CHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHH
Q 018348 242 TDQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 320 (357)
Q Consensus 242 ~~~~~~~~~~~~~g~~~~~~~-~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 320 (357)
.-......+|+.+|..+...| ++++|+..|+++|+++|+ +..+|.++|.++..+|++++|++++.++++++|++..+|
T Consensus 71 ~lnP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~ 149 (315)
T d2h6fa1 71 ELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAW 149 (315)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhcchHHH
Confidence 344578889999999999876 599999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 321 YLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 321 ~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+++|.++..+|++++|+.+|++|++++|.+..+|.
T Consensus 150 ~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~~ 184 (315)
T d2h6fa1 150 QHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 184 (315)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHCCccHHHHH
Confidence 99999999999999999999999999999988874
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=1.3e-15 Score=134.54 Aligned_cols=109 Identities=10% Similarity=-0.067 Sum_probs=102.3
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCC-hHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
+-++++...|..+.+++.+++|+..|++||+++|+ +..+|+++|.++..+|+ +++|+.+++++++++|++..+|+++|
T Consensus 41 ~~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~ 119 (315)
T d2h6fa1 41 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 119 (315)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHh
Confidence 34566677899999999999999999999999999 99999999999999875 89999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
.++..+|++++|+.+|++|++++|++..+|.
T Consensus 120 ~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~ 150 (315)
T d2h6fa1 120 VLVEWLRDPSQELEFIADILNQDAKNYHAWQ 150 (315)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHhhccHHHHHHHHhhhhhhhhcchHHHH
Confidence 9999999999999999999999999998874
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=1.8e-14 Score=127.02 Aligned_cols=108 Identities=9% Similarity=0.066 Sum_probs=101.6
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
......+++|..+++.|+|++|+..|+++|+.+|+ ++.+|.++|.+|..+|++++|+..+.++++++|++..+|+++|.
T Consensus 17 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 95 (323)
T d1fcha_ 17 RDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAV 95 (323)
T ss_dssp TTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccccccccc
Confidence 34555678999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+|..+|++++|++.|++++.++|.....+
T Consensus 96 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 124 (323)
T d1fcha_ 96 SFTNESLQRQACEILRDWLRYTPAYAHLV 124 (323)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred cccccccccccccchhhHHHhccchHHHH
Confidence 99999999999999999999999876543
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=3.7e-14 Score=126.80 Aligned_cols=109 Identities=13% Similarity=0.053 Sum_probs=103.2
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHH
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 325 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 325 (357)
..+..+...|..+...|++++|+..|++++...|. ....+..+|.++...|++++|++.|+++++++|+++.+|+++|.
T Consensus 269 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 347 (388)
T d1w3ba_ 269 HFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLAS 347 (388)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 55678889999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 326 ALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 326 ~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+|..+|++++|+.+|++|++++|++..++.
T Consensus 348 ~~~~~g~~~~A~~~~~~al~l~P~~~~a~~ 377 (388)
T d1w3ba_ 348 VLQQQGKLQEALMHYKEAIRISPTFADAYS 377 (388)
T ss_dssp HHHTTTCCHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999999999999987763
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=6.2e-14 Score=100.63 Aligned_cols=85 Identities=15% Similarity=-0.026 Sum_probs=76.3
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc------chHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 320 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 320 (357)
++++.++.|..+++.|+|++|+..|++|+++.|.. ...++.++|.+|.++|++++|+.+++++|+++|+++.++
T Consensus 4 saddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~ 83 (95)
T d1tjca_ 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (95)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHH
Confidence 36788999999999999999999999999986551 257899999999999999999999999999999999999
Q ss_pred HHHHHHHHHcC
Q 018348 321 YLQAAALSAMG 331 (357)
Q Consensus 321 ~~~g~~~~~~g 331 (357)
++++.+...++
T Consensus 84 ~Nl~~~~~~l~ 94 (95)
T d1tjca_ 84 GNLKYFEYIMA 94 (95)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99988776554
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=7.4e-14 Score=124.79 Aligned_cols=101 Identities=12% Similarity=-0.006 Sum_probs=96.4
Q ss_pred HHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHc
Q 018348 251 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAM 330 (357)
Q Consensus 251 ~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 330 (357)
+.+.|..+++.|+|++|+..|+++++.+|+ ++.++..+|.+|..+|++++|+..++++++++|+++.+|+++|.+|..+
T Consensus 2 ll~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~ 80 (388)
T d1w3ba_ 2 PMELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKER 80 (388)
T ss_dssp CCTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhh
Confidence 356899999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhhcccccccc
Q 018348 331 GMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 331 g~~~~A~~~~~~al~l~~~~~~ 352 (357)
|++++|+..++++++.++....
T Consensus 81 g~~~~A~~~~~~~~~~~~~~~~ 102 (388)
T d1w3ba_ 81 GQLQEAIEHYRHALRLKPDFID 102 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHH
T ss_pred cccccccccccccccccccccc
Confidence 9999999999999999887654
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.38 E-value=3.1e-13 Score=114.98 Aligned_cols=96 Identities=17% Similarity=0.060 Sum_probs=85.7
Q ss_pred hccCHHHHHHHHHHHhhcCCC---cchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHH
Q 018348 260 RQKDLKDAIECYTQFIDAGTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 336 (357)
Q Consensus 260 ~~~~~~~Ai~~~~~ai~~~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A 336 (357)
...+++.|+..+++++...+. ..+.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.++..+|++++|
T Consensus 11 ~~~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A 90 (259)
T d1xnfa_ 11 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAA 90 (259)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHh
Confidence 345678899999999875432 15678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccccccC
Q 018348 337 QVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 337 ~~~~~~al~l~~~~~~a~~ 355 (357)
+.+|+++++++|++..++.
T Consensus 91 ~~~~~~al~~~p~~~~a~~ 109 (259)
T d1xnfa_ 91 YEAFDSVLELDPTYNYAHL 109 (259)
T ss_dssp HHHHHHHHHHCTTCTHHHH
T ss_pred hhhhhHHHHHHhhhhhhHH
Confidence 9999999999999887653
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.36 E-value=5.9e-12 Score=101.04 Aligned_cols=99 Identities=8% Similarity=-0.042 Sum_probs=91.4
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc---------------------hHHHhhHHHHHHhcCChHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------------PTVYARRSLCYLMSDMPQDAL 303 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~---------------------~~~~~~~a~~~~~~~~~~~A~ 303 (357)
....+++.+.|..+...|++++|+..|++|+.+.+... ..++.+++.++..+|++++|+
T Consensus 8 ~~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al 87 (179)
T d2ff4a2 8 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 87 (179)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 45678899999999999999999999999999977520 146788999999999999999
Q ss_pred HHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHh
Q 018348 304 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 343 (357)
Q Consensus 304 ~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 343 (357)
.+++++++++|.+..+|.+++.+|..+|++.+|+..|+++
T Consensus 88 ~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~ 127 (179)
T d2ff4a2 88 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRV 127 (179)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.36 E-value=2.5e-12 Score=102.40 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=85.8
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+..+.++|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|++..++..++
T Consensus 74 ~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~ 152 (169)
T d1ihga1 74 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELL 152 (169)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 346677888999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHH
Q 018348 325 AALSAMGMENEAQ 337 (357)
Q Consensus 325 ~~~~~~g~~~~A~ 337 (357)
.+...+..+.++.
T Consensus 153 ~~~~~l~~~~~~~ 165 (169)
T d1ihga1 153 KVKQKIKAQKDKE 165 (169)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9998888777764
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.33 E-value=1.7e-13 Score=111.80 Aligned_cols=84 Identities=15% Similarity=0.141 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCceecCCCCCCeeeCCCCCeEEecCCCccccCCCCCccCCCCCCc------hhhhc
Q 018348 18 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP------PEYLR 91 (357)
Q Consensus 18 l~~~~~~~i~~~i~~~l~~lH~~~~~~H~dlk~~Nill~~~~~~kl~dfg~~~~~~~~~~~~gt~~y~a------PE~~~ 91 (357)
++...+..++.|++.+|.|||+.+ ++||||||+|||++.++ ++|+|||+++...+.... .|.. .+.+.
T Consensus 100 l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~~-~~liDFG~a~~~~~~~~~----~~l~rd~~~~~~~f~ 173 (191)
T d1zara2 100 VRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEEGWR----EILERDVRNIITYFS 173 (191)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETTE-EEECCCTTCEETTSTTHH----HHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCCC-EEEEECCCcccCCCCCcH----HHHHHHHHHHHHHHc
Confidence 455667789999999999999999 99999999999999655 889999998765433211 1111 12222
Q ss_pred CCCCCCcccchhHHHHH
Q 018348 92 TGRVTPESVIYSFGTLL 108 (357)
Q Consensus 92 ~~~~~~~~Di~slG~vl 108 (357)
..++.++|+||+.--+
T Consensus 174 -r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 174 -RTYRTEKDINSAIDRI 189 (191)
T ss_dssp -HHHCCCCCHHHHHHHH
T ss_pred -CCCCCcccHHHHHHHH
Confidence 4578899999976443
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=3.4e-12 Score=95.13 Aligned_cols=84 Identities=8% Similarity=-0.063 Sum_probs=79.1
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
....+..+..+|.+++..|+|++|+..|+++++++|+ ++.+|+++|.++..+|++++|+.+|+++++++|+++.++..+
T Consensus 33 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l 111 (117)
T d1elwa_ 33 DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGL 111 (117)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred CCcchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3467788999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 018348 324 AAALS 328 (357)
Q Consensus 324 g~~~~ 328 (357)
+.+..
T Consensus 112 ~~l~~ 116 (117)
T d1elwa_ 112 QNMEA 116 (117)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 88754
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=7.6e-12 Score=99.67 Aligned_cols=89 Identities=12% Similarity=0.034 Sum_probs=83.0
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 328 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 328 (357)
..+.+.|..+++.|+|++|+..+++||+++|+ +..+++++|.||..+|++++|+.+|+++++++|+++.+...++.+..
T Consensus 63 ~~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 141 (170)
T d1p5qa1 63 ASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQ 141 (170)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34677999999999999999999999999999 89999999999999999999999999999999999999999999998
Q ss_pred HcCChHHHHH
Q 018348 329 AMGMENEAQV 338 (357)
Q Consensus 329 ~~g~~~~A~~ 338 (357)
.++++.+...
T Consensus 142 ~~~~~~~~e~ 151 (170)
T d1p5qa1 142 RIRRQLAREK 151 (170)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888776654
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.29 E-value=1.1e-11 Score=98.63 Aligned_cols=88 Identities=14% Similarity=0.094 Sum_probs=82.1
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
+..+.++|.++++.|+|++|+..++++++++|+ +..+|+++|.+|..+|++++|+.+|.++++++|++..++..++.+.
T Consensus 64 ~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 142 (168)
T d1kt1a1 64 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQ 142 (168)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 445678999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHH
Q 018348 328 SAMGMENEA 336 (357)
Q Consensus 328 ~~~g~~~~A 336 (357)
..++.+.+.
T Consensus 143 ~~~~~~~e~ 151 (168)
T d1kt1a1 143 KKAKEHNER 151 (168)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhHHHH
Confidence 888877653
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=1.7e-11 Score=96.45 Aligned_cols=97 Identities=13% Similarity=-0.015 Sum_probs=86.6
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+..|...|..++..|++++|+..|+++|+++|+ +..+|.++|.++..+|++++|+.+++++++++|+++.++..++
T Consensus 41 p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~ 119 (159)
T d1a17a_ 41 PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQ 119 (159)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 467888999999999999999999999999999999 8999999999999999999999999999999999999988887
Q ss_pred HHH--HHcCChHHHHHHHHH
Q 018348 325 AAL--SAMGMENEAQVALKE 342 (357)
Q Consensus 325 ~~~--~~~g~~~~A~~~~~~ 342 (357)
.+. ...+.+++|+...+.
T Consensus 120 ~~~~~~~~~~~~~a~~~~~~ 139 (159)
T d1a17a_ 120 ECNKIVKQKAFERAIAGDEH 139 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHH
Confidence 764 445557777765443
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.25 E-value=1.3e-11 Score=96.55 Aligned_cols=84 Identities=8% Similarity=0.039 Sum_probs=78.1
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 327 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 327 (357)
+..+.++|..+++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|+++++++|++..+...++.+.
T Consensus 67 ~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 145 (153)
T d2fbna1 67 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 145 (153)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 345678999999999999999999999999999 8999999999999999999999999999999999999999999887
Q ss_pred HHcCC
Q 018348 328 SAMGM 332 (357)
Q Consensus 328 ~~~g~ 332 (357)
.++++
T Consensus 146 ~kl~~ 150 (153)
T d2fbna1 146 NKLKE 150 (153)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76643
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=5.8e-12 Score=90.04 Aligned_cols=73 Identities=11% Similarity=-0.158 Sum_probs=66.1
Q ss_pred hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc-------hHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 283 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 283 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~-------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
++-.+++|.++...|+|++|+..|++|+++.|.+ .++++++|.+++++|+|++|+..|++||+++|++..++.
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 4556789999999999999999999999987644 678999999999999999999999999999999987753
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.24 E-value=8.1e-12 Score=92.21 Aligned_cols=72 Identities=14% Similarity=-0.025 Sum_probs=67.9
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 284 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 284 ~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
..+++.|.++.+.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|++..+|.
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 88 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHA 88 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccccchH
Confidence 345778999999999999999999999999999999999999999999999999999999999999987763
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=1e-11 Score=93.99 Aligned_cols=72 Identities=13% Similarity=-0.051 Sum_probs=68.0
Q ss_pred hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 283 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 283 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+..+.++|.++...|+|++|+.+|+++|+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..++
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 75 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHH
Confidence 455778999999999999999999999999999999999999999999999999999999999999988765
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.22 E-value=1.2e-11 Score=100.67 Aligned_cols=73 Identities=10% Similarity=-0.009 Sum_probs=69.4
Q ss_pred hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 283 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 283 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+..+...|..|.+.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+|.
T Consensus 4 a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~ 76 (201)
T d2c2la1 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHF 76 (201)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHH
Confidence 5667789999999999999999999999999999999999999999999999999999999999999987763
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=2.3e-11 Score=113.72 Aligned_cols=107 Identities=8% Similarity=-0.069 Sum_probs=75.2
Q ss_pred hHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHH
Q 018348 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 324 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 324 (357)
...+..+...|..+.+.|++++|+..|++++..++. .++.++|.++...|++++|+.+|.+|++++|+++.+|+++|
T Consensus 117 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg 193 (497)
T d1ya0a1 117 LPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLA 193 (497)
T ss_dssp --------------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHH
T ss_pred hhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 456777889999999999999999999999988765 57788999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
.++...|++.+|+.+|.+|+.++|....|+
T Consensus 194 ~~~~~~~~~~~A~~~y~ral~~~~~~~~a~ 223 (497)
T d1ya0a1 194 ILASSKGDHLTTIFYYCRSIAVKFPFPAAS 223 (497)
T ss_dssp HHHHHTTCHHHHHHHHHHHHSSSBCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhCCCCCHHHH
Confidence 999999999999999999999999887664
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.10 E-value=1.5e-10 Score=102.19 Aligned_cols=106 Identities=8% Similarity=-0.142 Sum_probs=68.6
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCC--hHHHHHHHHHHHHhCCCchHHHH-HHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM--PQDALNDAMQAQIISPIWHIASY-LQA 324 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~al~l~p~~~~a~~-~~g 324 (357)
...+...+..+...|++++|+..|+++++.+|+ ++.+|.++|.++...++ +++|+..+.++++++|.+..+++ ..|
T Consensus 73 l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~ 151 (334)
T d1dcea1 73 LQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRF 151 (334)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCchhhhhhhhHHH
Confidence 344444455555666666777777777777776 66666666666666554 56677777777777776666643 446
Q ss_pred HHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 325 AALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 325 ~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
.++...|++++|+..++++++++|++..+|
T Consensus 152 ~~~~~~~~~~~Al~~~~~~i~~~p~~~~a~ 181 (334)
T d1dcea1 152 VAAQAAVAPAEELAFTDSLITRNFSNYSSW 181 (334)
T ss_dssp HHHHTCCCHHHHHHHHHTTTTTTCCCHHHH
T ss_pred HHHHhccccHHHHHHHHHHHHcCCCCHHHH
Confidence 666666777777777777777777666555
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.09 E-value=7.6e-11 Score=91.08 Aligned_cols=93 Identities=14% Similarity=-0.030 Sum_probs=80.7
Q ss_pred hhhHhhHHHHHHHhHHHh----------ccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCC-----------hHH
Q 018348 243 DQMQETLNSKKKGDVAFR----------QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-----------PQD 301 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~----------~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-----------~~~ 301 (357)
.....+..+...|.++.. .+.+++|+..|++||+++|+ ++.+|+++|.+|..+|+ +++
T Consensus 26 ~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~ 104 (145)
T d1zu2a1 26 SNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDL 104 (145)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred hCCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhHHH
Confidence 334778889999999885 45568999999999999999 89999999999988764 799
Q ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHH
Q 018348 302 ALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 336 (357)
Q Consensus 302 A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A 336 (357)
|+++|++|++++|++..++..++.+....+.|.++
T Consensus 105 A~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 105 ATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred hhhhhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998777666665
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=1.1e-10 Score=87.24 Aligned_cols=86 Identities=13% Similarity=0.012 Sum_probs=75.7
Q ss_pred hHhhHHHHHHHhHHHh---ccCHHHHHHHHHHHhhcCCCcc--hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHH
Q 018348 245 MQETLNSKKKGDVAFR---QKDLKDAIECYTQFIDAGTMVS--PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 319 (357)
Q Consensus 245 ~~~~~~~~~~g~~~~~---~~~~~~Ai~~~~~ai~~~p~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a 319 (357)
...++.+++.|..+++ .+++++|+..|+++++.+|+ + ..+++++|.+|..+|++++|+++|+++++++|++.+|
T Consensus 30 p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~-~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A 108 (122)
T d1nzna_ 30 SVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK-EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQA 108 (122)
T ss_dssp CCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHH
Confidence 4677889999999986 45667899999999999987 4 3589999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcC
Q 018348 320 SYLQAAALSAMG 331 (357)
Q Consensus 320 ~~~~g~~~~~~g 331 (357)
...++.+..+++
T Consensus 109 ~~l~~~I~~~~~ 120 (122)
T d1nzna_ 109 KELERLIDKAMK 120 (122)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 999988876553
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=99.05 E-value=5.1e-10 Score=95.15 Aligned_cols=101 Identities=13% Similarity=0.003 Sum_probs=84.2
Q ss_pred HHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH----------
Q 018348 254 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ---------- 323 (357)
Q Consensus 254 ~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~---------- 323 (357)
++..+++.|++++|+..|+++|+.+|+ +..++.+++.+|...|++++|+..++++++++|++..++..+
T Consensus 2 q~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~ 80 (264)
T d1zbpa1 2 QWKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 80 (264)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Confidence 356788899999999999999999999 899999999999999999999999999998888776655444
Q ss_pred -------------------------HHHHHHcCChHHHHHHHHHhhccccccccccC
Q 018348 324 -------------------------AAALSAMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 324 -------------------------g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
+.++...|++++|.+.++++.++.|.....|.
T Consensus 81 ~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~~~ 137 (264)
T d1zbpa1 81 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLAN 137 (264)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEEET
T ss_pred HHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCcccc
Confidence 44446668899999999999998888776554
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.01 E-value=3.7e-10 Score=97.64 Aligned_cols=106 Identities=11% Similarity=0.032 Sum_probs=90.2
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCC-----cchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc----
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 316 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 316 (357)
+.++.|.+.|+.+...|+|++|+.+|++|+++... .....|.++|.||..+|++++|++.+++++++.+..
T Consensus 35 ~Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~ 114 (290)
T d1qqea_ 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFR 114 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccch
Confidence 44667888899999999999999999999997321 135689999999999999999999999999987655
Q ss_pred --hHHHHHHHHHHHH-cCChHHHHHHHHHhhccccccc
Q 018348 317 --HIASYLQAAALSA-MGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 317 --~~a~~~~g~~~~~-~g~~~~A~~~~~~al~l~~~~~ 351 (357)
..++.++|.++.. +|++++|+..|++|+++.+...
T Consensus 115 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~ 152 (290)
T d1qqea_ 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ 152 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5678889988855 7999999999999999876543
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.97 E-value=1.3e-09 Score=96.00 Aligned_cols=96 Identities=9% Similarity=-0.072 Sum_probs=84.3
Q ss_pred HHhccC-HHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCC----------hHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 258 AFRQKD-LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM----------PQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 258 ~~~~~~-~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
....++ .++|+..|+++|+++|+ ++.+|+.++.++..++. +++|+..++++++.+|+++.+|+.+|.+
T Consensus 38 ~~~~~~~~~~al~~~~~~l~~~P~-~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~ 116 (334)
T d1dcea1 38 KRQAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWL 116 (334)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHhcccccHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHhhHH
Confidence 334444 58999999999999999 89999888877666544 7899999999999999999999999999
Q ss_pred HHHcCC--hHHHHHHHHHhhcccccccccc
Q 018348 327 LSAMGM--ENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 327 ~~~~g~--~~~A~~~~~~al~l~~~~~~a~ 354 (357)
+..+++ +++|+..++++++++|++..+|
T Consensus 117 ~~~~~~~~~~~a~~~~~~al~~~~~~~~~~ 146 (334)
T d1dcea1 117 LSRLPEPNWARELELCARFLEADERNFHCW 146 (334)
T ss_dssp HHTCSSCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhccccHHHHHHHHHHHHhhCchhhhhh
Confidence 988876 8999999999999999987765
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.95 E-value=1.6e-09 Score=93.58 Aligned_cols=109 Identities=8% Similarity=-0.189 Sum_probs=92.8
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCc-----chHHHhhHHHHHHh-cCChHHHHHHHHHHHHhCCC--
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLM-SDMPQDALNDAMQAQIISPI-- 315 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~-----~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~l~p~-- 315 (357)
....+..+.+.|..+.+.|++++|+..|++++++.+.. ...++.++|.+|.. .|++++|++.|++|+++.+.
T Consensus 73 ~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~ 152 (290)
T d1qqea_ 73 EDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ 152 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34567889999999999999999999999999986551 14678888888865 69999999999999987543
Q ss_pred ----chHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccc
Q 018348 316 ----WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 352 (357)
Q Consensus 316 ----~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~ 352 (357)
...++.++|.++..+|+|++|+..|++++++.+.+..
T Consensus 153 ~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~~ 193 (290)
T d1qqea_ 153 SVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (290)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred chhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccchh
Confidence 3556999999999999999999999999999887753
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.78 E-value=2.2e-08 Score=87.16 Aligned_cols=108 Identities=10% Similarity=-0.047 Sum_probs=92.3
Q ss_pred hhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc----hHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCc---
Q 018348 244 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 316 (357)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--- 316 (357)
..-.++...-+|..++..|++++|+..|+++++..|+++ ..++.++|.+|..+|++++|+..+++++++.+..
T Consensus 8 ~~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 87 (366)
T d1hz4a_ 8 DTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW 87 (366)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred cchhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcch
Confidence 334556666789999999999999999999999999832 2478889999999999999999999999876543
Q ss_pred ---hHHHHHHHHHHHHcCChHHHHHHHHHhhccccccc
Q 018348 317 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 317 ---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
..+++++|.++...|++..|...+.+++++.+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~ 125 (366)
T d1hz4a_ 88 HYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQH 125 (366)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcc
Confidence 45788999999999999999999999998876543
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.72 E-value=2.4e-08 Score=92.78 Aligned_cols=85 Identities=13% Similarity=-0.037 Sum_probs=79.6
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 326 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 326 (357)
....+...|..+...|+|++|+..|++|++++|+ +...|+++|.++...|++.+|+.+|.+|+.++|.++.|+.+++.+
T Consensus 151 ~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~ 229 (497)
T d1ya0a1 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3467889999999999999999999999999999 999999999999999999999999999999999999999999998
Q ss_pred HHHcCC
Q 018348 327 LSAMGM 332 (357)
Q Consensus 327 ~~~~g~ 332 (357)
+.+..+
T Consensus 230 ~~~~~~ 235 (497)
T d1ya0a1 230 LSKALE 235 (497)
T ss_dssp HHHHTT
T ss_pred HHHhhh
Confidence 876543
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.68 E-value=3.6e-08 Score=71.99 Aligned_cols=71 Identities=7% Similarity=-0.107 Sum_probs=42.4
Q ss_pred hHHHhhHHHHHHhcC---ChHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHHcCChHHHHHHHHHhhccccccccc
Q 018348 283 PTVYARRSLCYLMSD---MPQDALNDAMQAQIISPIW-HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 353 (357)
Q Consensus 283 ~~~~~~~a~~~~~~~---~~~~A~~~~~~al~l~p~~-~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a 353 (357)
....++.|.|+.+.. +.++|+..++.+++.+|.. .+++|++|++|+++|+|++|+++++++|+++|++..|
T Consensus 35 ~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA 109 (124)
T d2pqrb1 35 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 109 (124)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHH
Confidence 345555565555432 3446666666666666644 3566666666666666666666666666666666554
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.63 E-value=4.4e-08 Score=85.24 Aligned_cols=105 Identities=10% Similarity=-0.074 Sum_probs=91.1
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcc---hHHHhhHHHHHHhcCChHHHHHHHHHHHH------hCCCc
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQI------ISPIW 316 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~------l~p~~ 316 (357)
..+..+...|..+...|++++|+..+.++++..+... ...+.++|.+|..+|++++|+..+++++. ..|..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 290 (366)
T d1hz4a_ 211 WISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDL 290 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHH
Confidence 3455677889999999999999999999999877632 34677899999999999999999999984 45677
Q ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHhhcccccc
Q 018348 317 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 317 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 350 (357)
..+++.+|.+|..+|++++|++.|++|+++.+..
T Consensus 291 ~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~~ 324 (366)
T d1hz4a_ 291 NRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRT 324 (366)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhhc
Confidence 8899999999999999999999999999987654
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.57 E-value=5.8e-08 Score=75.36 Aligned_cols=70 Identities=16% Similarity=0.066 Sum_probs=60.2
Q ss_pred hHHHhhH--HHHHHhcCChHHHHHHHHHHHHhCCCch------------HHHHHHHHHHHHcCChHHHHHHHHHhhcccc
Q 018348 283 PTVYARR--SLCYLMSDMPQDALNDAMQAQIISPIWH------------IASYLQAAALSAMGMENEAQVALKEGTTLEA 348 (357)
Q Consensus 283 ~~~~~~~--a~~~~~~~~~~~A~~~~~~al~l~p~~~------------~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 348 (357)
+.+|.++ |..++..|+|++|+..|++||+++|+.+ .+|.++|.+|..+|+|++|+.++++++++.+
T Consensus 7 a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~ 86 (156)
T d2hr2a1 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 86 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccc
Confidence 3445554 7788889999999999999999998753 5799999999999999999999999999987
Q ss_pred cccc
Q 018348 349 KKNS 352 (357)
Q Consensus 349 ~~~~ 352 (357)
+...
T Consensus 87 ~~~~ 90 (156)
T d2hr2a1 87 RRGE 90 (156)
T ss_dssp HHCC
T ss_pred cccc
Confidence 6544
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.48 E-value=5.3e-07 Score=77.88 Aligned_cols=101 Identities=13% Similarity=-0.033 Sum_probs=85.6
Q ss_pred HHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHH-hcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 018348 250 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYL-MSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 328 (357)
Q Consensus 250 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 328 (357)
.|...+....+.|+++.|...|.+|++..|. +...|...|.... ..|+.+.|...|+++++.+|.++..|...+..+.
T Consensus 136 ~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~ 214 (308)
T d2onda1 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 4567777888889999999999999999998 7888887776543 4588889999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHhhccccccc
Q 018348 329 AMGMENEAQVALKEGTTLEAKKN 351 (357)
Q Consensus 329 ~~g~~~~A~~~~~~al~l~~~~~ 351 (357)
..|+++.|+..|++|++..|.+.
T Consensus 215 ~~g~~~~aR~~fe~ai~~~~~~~ 237 (308)
T d2onda1 215 HLNEDNNTRVLFERVLTSGSLPP 237 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSSSCG
T ss_pred HcCChHHHHHHHHHHHHhCCCCh
Confidence 99999999999999998776543
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.46 E-value=4e-07 Score=66.29 Aligned_cols=83 Identities=5% Similarity=-0.168 Sum_probs=69.8
Q ss_pred hhHHHHHHHhHHHhc---cCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 247 ETLNSKKKGDVAFRQ---KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~---~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
.++.-++-|..+.+. .+.++||..++++++.+|.+.-+.++++|.+|.++|+|++|.++++++|+++|++..|...+
T Consensus 34 s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~ 113 (124)
T d2pqrb1 34 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 113 (124)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHH
Confidence 356677888888754 56689999999999999973347899999999999999999999999999999999998766
Q ss_pred HHHHHH
Q 018348 324 AAALSA 329 (357)
Q Consensus 324 g~~~~~ 329 (357)
-.+..+
T Consensus 114 ~~Ie~~ 119 (124)
T d2pqrb1 114 SMVEDK 119 (124)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.38 E-value=8.5e-07 Score=76.56 Aligned_cols=107 Identities=9% Similarity=-0.092 Sum_probs=94.5
Q ss_pred HHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 018348 249 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 328 (357)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 328 (357)
.-+...+......|++++|...|+++++..|.+...+|...+......|+++.|.+.|.++++..|.....|...|....
T Consensus 100 ~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~ 179 (308)
T d2onda1 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 179 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 44667788888999999999999999999998334578889999999999999999999999999999999999988754
Q ss_pred -HcCChHHHHHHHHHhhccccccccccC
Q 018348 329 -AMGMENEAQVALKEGTTLEAKKNSTAG 355 (357)
Q Consensus 329 -~~g~~~~A~~~~~~al~l~~~~~~a~~ 355 (357)
..|+.+.|...|+++++..|.+...|.
T Consensus 180 ~~~~~~~~a~~i~e~~l~~~p~~~~~w~ 207 (308)
T d2onda1 180 YCSKDKSVAFKIFELGLKKYGDIPEYVL 207 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhccCHHHHHHHHHHHHHhhhhhHHHHH
Confidence 568999999999999999999876653
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.31 E-value=3.2e-07 Score=77.46 Aligned_cols=63 Identities=21% Similarity=-0.008 Sum_probs=58.7
Q ss_pred HHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCChHHHHHHHHHhhcccccccccc
Q 018348 292 CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 354 (357)
Q Consensus 292 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~a~ 354 (357)
-.+..|++++|+..++++++.+|+++.++..+|.+|+.+|++++|++.|+++++++|++..++
T Consensus 5 ~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~ 67 (264)
T d1zbpa1 5 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 67 (264)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 345679999999999999999999999999999999999999999999999999999887543
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=98.23 E-value=7.5e-06 Score=68.53 Aligned_cols=98 Identities=12% Similarity=0.076 Sum_probs=84.6
Q ss_pred hHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHh----cCChHHHHHHHHHHHHhCCCchHHHHHH
Q 018348 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQ 323 (357)
Q Consensus 248 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~ 323 (357)
+.+++..|..++.+|||++|+..|++|.+.+ +..+.+++|.+|.. ..++..|...+..+.+.. ++.+.+.+
T Consensus 2 p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~g---~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~--~~~a~~~l 76 (265)
T d1ouva_ 2 PKELVGLGAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLL 76 (265)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc--ccchhhcc
Confidence 5789999999999999999999999998864 56788999999998 678999999999987665 78889999
Q ss_pred HHHHHH----cCChHHHHHHHHHhhcccccc
Q 018348 324 AAALSA----MGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 324 g~~~~~----~g~~~~A~~~~~~al~l~~~~ 350 (357)
|.++.. ..+++.|...|+++.+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~~ 107 (265)
T d1ouva_ 77 GNLYYSGQGVSQNTNKALQYYSKACDLKYAE 107 (265)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred ccccccccccchhhHHHHHHHhhhhhhhhhh
Confidence 998876 578999999999998776543
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.17 E-value=3e-06 Score=66.93 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=63.4
Q ss_pred HhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHH-------HHhCCCc
Q 018348 246 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA-------QIISPIW 316 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a-------l~l~p~~ 316 (357)
.....+...|..+...|+|++|+..++++++.+|. +..+|.+++.+|..+|++.+|+..|+++ +.++|..
T Consensus 65 ~~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 65 DKVLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 34567888999999999999999999999999999 8999999999999999999999999998 4566653
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=98.00 E-value=3.6e-05 Score=57.21 Aligned_cols=86 Identities=10% Similarity=-0.061 Sum_probs=73.4
Q ss_pred HhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHh----cCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHH----c
Q 018348 259 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----M 330 (357)
Q Consensus 259 ~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~ 330 (357)
....++++|+..|+++.+. . ++.+.+++|..|.. ..++++|++.|+++.+. .++.+.+++|.+|.. .
T Consensus 34 ~~~~~~~~a~~~~~~aa~~--g-~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~ 108 (133)
T d1klxa_ 34 NSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVV 108 (133)
T ss_dssp CTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSC
T ss_pred ccccCHHHHHHHHhhhhcc--c-chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccC
Confidence 3457899999999999986 4 56788889999987 46789999999999886 578999999999987 5
Q ss_pred CChHHHHHHHHHhhccccc
Q 018348 331 GMENEAQVALKEGTTLEAK 349 (357)
Q Consensus 331 g~~~~A~~~~~~al~l~~~ 349 (357)
.++++|+.+|++|.++...
T Consensus 109 ~d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 109 KNEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp CCHHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHCCCH
Confidence 7899999999999887643
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.81 E-value=5.5e-05 Score=62.99 Aligned_cols=100 Identities=20% Similarity=0.112 Sum_probs=82.7
Q ss_pred HhhHHHHHHHhHHHh----ccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHh----cCChHHHHHHHHHHHHhCCCch
Q 018348 246 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWH 317 (357)
Q Consensus 246 ~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~ 317 (357)
.....+...|..+.. ..+...+...++.+.+. . ++.+.+++|.+|.. ..++++|+.+|.+|.+. .++
T Consensus 140 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~--g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~ 214 (265)
T d1ouva_ 140 NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENG 214 (265)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred cccchhhhhhhhhccCCCcccccccchhhhhccccc--c-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCH
Confidence 344556777777775 56788888889988864 4 56888999999997 67899999999999988 478
Q ss_pred HHHHHHHHHHHH----cCChHHHHHHHHHhhcccccc
Q 018348 318 IASYLQAAALSA----MGMENEAQVALKEGTTLEAKK 350 (357)
Q Consensus 318 ~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~~~~ 350 (357)
.+++++|.+|.. .+++++|+++|++|.++....
T Consensus 215 ~a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~~ 251 (265)
T d1ouva_ 215 GGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 251 (265)
T ss_dssp HHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcCHH
Confidence 999999999986 558999999999998886554
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.46 E-value=0.00022 Score=52.76 Aligned_cols=79 Identities=15% Similarity=-0.014 Sum_probs=64.5
Q ss_pred cCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCChHHHHHHHHHHHHhCCCchHHHHHHHHHHHH----cCChHHHH
Q 018348 262 KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MGMENEAQ 337 (357)
Q Consensus 262 ~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~g~~~~A~ 337 (357)
.|+++|+..|++|.+.+.. .+.++++. ....+.++|++.++++.+. +++.+.+++|..|.. ..++++|+
T Consensus 7 kd~~~A~~~~~kaa~~g~~---~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A~ 79 (133)
T d1klxa_ 7 KDLKKAIQYYVKACELNEM---FGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 79 (133)
T ss_dssp HHHHHHHHHHHHHHHTTCT---THHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCh---hhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHHH
Confidence 5889999999999987644 44444443 4457899999999999876 689999999999886 56799999
Q ss_pred HHHHHhhccc
Q 018348 338 VALKEGTTLE 347 (357)
Q Consensus 338 ~~~~~al~l~ 347 (357)
++|++|.+..
T Consensus 80 ~~~~~aa~~g 89 (133)
T d1klxa_ 80 QYYSKACGLN 89 (133)
T ss_dssp HHHHHHHHTT
T ss_pred HHHhhhhccC
Confidence 9999998764
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.78 E-value=0.053 Score=45.49 Aligned_cols=28 Identities=21% Similarity=0.170 Sum_probs=25.1
Q ss_pred ceecCCCCCCeeeCCCCCeEEecCCCcc
Q 018348 43 ALYHDLNAYRILFDEDGNPRLSTFGLMK 70 (357)
Q Consensus 43 ~~H~dlk~~Nill~~~~~~kl~dfg~~~ 70 (357)
+||+|+.+.||+++.+...-|.||+.+.
T Consensus 185 iIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 185 VIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccCCcchhhhhcccccceeEecccccc
Confidence 8999999999999988777899999753
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=90.98 E-value=0.043 Score=44.52 Aligned_cols=28 Identities=14% Similarity=0.107 Sum_probs=23.9
Q ss_pred ceecCCCCCCeeeCCCCCeEEecCCCcc
Q 018348 43 ALYHDLNAYRILFDEDGNPRLSTFGLMK 70 (357)
Q Consensus 43 ~~H~dlk~~Nill~~~~~~kl~dfg~~~ 70 (357)
++|+|+.|.||+++.++.+.|+||+.+.
T Consensus 185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred EEEeeccCcceeecCCceEEEeechhcc
Confidence 7999999999999977666799998653
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=90.47 E-value=0.038 Score=44.62 Aligned_cols=28 Identities=11% Similarity=0.054 Sum_probs=24.1
Q ss_pred ceecCCCCCCeeeCCCCCeEEecCCCcc
Q 018348 43 ALYHDLNAYRILFDEDGNPRLSTFGLMK 70 (357)
Q Consensus 43 ~~H~dlk~~Nill~~~~~~kl~dfg~~~ 70 (357)
++|+|+.|.||+++.++.+-|+||+.+.
T Consensus 177 liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 177 VTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 7999999999999977667799998653
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.77 E-value=0.2 Score=33.49 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=29.1
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhh
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFID 276 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~ 276 (357)
.....|..+..+|..+-..|+|++|+..|.+||+
T Consensus 10 ~~~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie 43 (93)
T d1wfda_ 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3456778888999999999999999999999976
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.29 E-value=0.41 Score=30.57 Aligned_cols=30 Identities=13% Similarity=0.258 Sum_probs=23.2
Q ss_pred hhHHHHHHHhHHHhccCHHHHHHHHHHHhh
Q 018348 247 ETLNSKKKGDVAFRQKDLKDAIECYTQFID 276 (357)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~ 276 (357)
.|=-+-++|..+.+.|.|++||+++++|..
T Consensus 7 ~AH~~~RrAer~l~~~rydeAIech~kA~~ 36 (83)
T d2crba1 7 LAHQQSRRADRLLAAGKYEEAISCHRKATT 36 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344456788889999999999998887754
|
| >d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Vacuolar sorting protein 4b (VPS4B, SKD1 protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.04 E-value=0.21 Score=32.10 Aligned_cols=34 Identities=12% Similarity=0.304 Sum_probs=27.7
Q ss_pred hhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhh
Q 018348 243 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFID 276 (357)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~ 276 (357)
+.++.+..+..+|...=..|+|++|+.+|.+|++
T Consensus 6 ~~l~~A~~l~~~Av~~D~~~~y~~A~~~Y~~a~~ 39 (77)
T d1wr0a1 6 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 39 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4456777888888888888998888888888876
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=86.79 E-value=0.35 Score=30.87 Aligned_cols=22 Identities=27% Similarity=0.212 Sum_probs=10.6
Q ss_pred HHHHHHHHcCChHHHHHHHHHh
Q 018348 322 LQAAALSAMGMENEAQVALKEG 343 (357)
Q Consensus 322 ~~g~~~~~~g~~~~A~~~~~~a 343 (357)
+++..+...|+|++|++|.++|
T Consensus 13 RrAer~l~~~rydeAIech~kA 34 (83)
T d2crba1 13 RRADRLLAAGKYEEAISCHRKA 34 (83)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHH
Confidence 3444444555555555444443
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=86.13 E-value=0.15 Score=44.11 Aligned_cols=27 Identities=15% Similarity=0.100 Sum_probs=23.4
Q ss_pred ceecCCCCCCeeeCCCCCeEEecCCCcc
Q 018348 43 ALYHDLNAYRILFDEDGNPRLSTFGLMK 70 (357)
Q Consensus 43 ~~H~dlk~~Nill~~~~~~kl~dfg~~~ 70 (357)
++|||+.|.|||++.++ ++|+||..+.
T Consensus 225 LiHGDl~~gNIlv~~~~-~~vID~E~a~ 251 (392)
T d2pula1 225 LIHGDLHTGSIFASEHE-TKVIDPEFAF 251 (392)
T ss_dssp EECSCCCGGGEEECSSC-EEECCCTTCE
T ss_pred eeccCCcCCceeEcCCc-eEEechhhcc
Confidence 89999999999998765 7899997654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=83.80 E-value=0.52 Score=39.31 Aligned_cols=27 Identities=30% Similarity=0.424 Sum_probs=22.0
Q ss_pred ceecCCCCCCeeeCCCCCeEEecCCCccc
Q 018348 43 ALYHDLNAYRILFDEDGNPRLSTFGLMKN 71 (357)
Q Consensus 43 ~~H~dlk~~Nill~~~~~~kl~dfg~~~~ 71 (357)
+||+|+.+.|||+++ + ..++||+-+..
T Consensus 194 liHgDlh~~NvL~~~-~-~~~IDFdd~~~ 220 (325)
T d1zyla1 194 RLHGDCHAGNILWRD-G-PMFVDLDDARN 220 (325)
T ss_dssp ECCSSCSGGGEEESS-S-EEECCCTTCCE
T ss_pred eecCCCCcccEEEeC-C-ceEEechhccc
Confidence 799999999999974 3 45899987543
|
| >d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-hydrolase/oxidoreductase superfamily: Metallo-hydrolase/oxidoreductase family: Alkylsulfatase-like domain: Alkylsulfatase SdsA1 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=81.69 E-value=0.95 Score=40.29 Aligned_cols=60 Identities=5% Similarity=0.028 Sum_probs=50.0
Q ss_pred hhhhhhhHhhHHHHHHHhHHHhccCHHHHHHHHHHHhhcCCCcchHHHhhHHHHHHhcCCh
Q 018348 239 QMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMP 299 (357)
Q Consensus 239 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~ 299 (357)
+.+.+-+--+++..++|..++.+|+|+.|.+..+.++..+|+ +..+...++.+|.++|.-
T Consensus 421 ~~~v~~~GG~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~-~~~ar~l~a~~~~~l~~~ 480 (505)
T d2cfua2 421 GRYVEYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPD-NRAARELQADALEQLGYQ 480 (505)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHh
Confidence 344445556788889999999999999999999999999999 888888888888886643
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