Citrus Sinensis ID: 018392

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350------
MALLNQQLQRFLLTRLNYNFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVELV
ccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccEEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEcccccEEEEcccEEEEccccccccccccccHHHHHHHHHcccEEEccccccEEEHHHHccccccccccccccccccccccccHHHHcccccccccEEEcccEEEEEcccccEEEEEEccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccEEEEEEccccccccc
ccccccccccccccccccccccHHHHccccccccccccccccccccEcccccccccccEEEEEEccccccccHHHHHEEccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHcHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccEEEEEEcccccEEEEcccEEEEccccccccccccccHHHHHHHHHcccEEEEccccccEEEEHHcccccEccccccccccccccccccHHHcccccccccEEcccccEEEEEcccccEEEEEEccccHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccEEEEEEEEcccccEcc
MALLNQQLQRFLLTRlnynfkptvknnfvnttTARAKSQCYCSAiaidapsslsgvagirwgSVSLQglreemedgaviqsdgldgfsfaavfdghggvstVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMnaeedesgataTVMFIGRDILFISHVGDCCVVLsrtgkadvltnphrpygsgqvSLQEIRRIREAggwisngricgdiavsrafgdirfkTKKNEMLKKGVNEGRWSEKFVSRVQLNkdlviaspdifqvslgsdAEFVLLASDglwdymnsSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVELV
MALLNQQLQRFLLTrlnynfkptvknNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTgkadvltnphrpygsgqvslQEIRRIREAggwisngricgdiavsrafgdirfktkknemlkkgvnegrwsekFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVELV
MALLNQQLQRFLLTRLNYNFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVqlacealaqaaldqHSQDNISIVIADLGYASVELV
******QLQRFLLTRLNYNFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLE*********ATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYAS****
****************************************************LSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQG*****GKDFDAIKKALQEAFENVDMKLLNRLEM***EDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYA*****
MALLNQQLQRFLLTRLNYNFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVELV
**********FLLTRLNYNFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRL*******ESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKK***********RWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYAS****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MALLNQQLQRFLLTRLNYNFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVELV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query356 2.2.26 [Sep-21-2011]
P49599388 Protein phosphatase 2C 57 yes no 0.969 0.889 0.651 1e-132
Q5JKN1389 Probable protein phosphat yes no 0.817 0.748 0.648 1e-110
Q69QZ0354 Probable protein phosphat no no 0.789 0.793 0.303 9e-31
P36993390 Protein phosphatase 1B OS yes no 0.738 0.674 0.303 7e-30
O62830 484 Protein phosphatase 1B OS yes no 0.738 0.543 0.303 1e-29
P35815390 Protein phosphatase 1B OS yes no 0.738 0.674 0.306 2e-29
Q5SMK6360 Probable protein phosphat no no 0.702 0.694 0.311 3e-29
P49596356 Probable protein phosphat yes no 0.699 0.699 0.316 6e-29
Q8VZN9371 Probable protein phosphat no no 0.685 0.657 0.332 6e-29
O75688 479 Protein phosphatase 1B OS no no 0.735 0.546 0.312 1e-28
>sp|P49599|P2C57_ARATH Protein phosphatase 2C 57 OS=Arabidopsis thaliana GN=PPH1 PE=2 SV=2 Back     alignment and function desciption
 Score =  472 bits (1214), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 230/353 (65%), Positives = 278/353 (78%), Gaps = 8/353 (2%)

Query: 1   MALLNQQLQRFLLTRLNYNFKPTVKNN---FVNTTTARAKSQCYCSAIAIDAPSSLSGVA 57
           MALL   L RF    L ++  P+        V  T  R +    CSAIAIDAPSSL+GV 
Sbjct: 1   MALLRPHLHRFHSNTLRHSAYPSADAGGGLVVYPTYGRHR----CSAIAIDAPSSLTGVT 56

Query: 58  GIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAAL 117
            IRWG  S+QG R+EMED  VI+SD +D FS+AAVFDGH G S+VKFLR+ELYKECV AL
Sbjct: 57  PIRWGYTSVQGFRDEMEDDIVIRSDAVDSFSYAAVFDGHAGSSSVKFLREELYKECVGAL 116

Query: 118 QGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNA-EEDESGATATVMFIGRDILFIS 176
           Q G LL+G DF AIK+AL +AFE+VD  LL  LE N  EEDESG+TATVM I  D+ FI+
Sbjct: 117 QAGSLLNGGDFAAIKEALIKAFESVDRNLLKWLEANGDEEDESGSTATVMIIRNDVSFIA 176

Query: 177 HVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAF 236
           H+GD C VLSR+G+ + LT+ HRPYGS + ++QE++R++EAGGWI NGRICGDIAVSRAF
Sbjct: 177 HIGDSCAVLSRSGQIEELTDYHRPYGSSRAAIQEVKRVKEAGGWIVNGRICGDIAVSRAF 236

Query: 237 GDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASD 296
           GDIRFKTKKN+MLKKGV+EGRWSEKFVSR++   D+V+A+PDIFQV L SD EF++LASD
Sbjct: 237 GDIRFKTKKNDMLKKGVDEGRWSEKFVSRIEFKGDMVVATPDIFQVPLTSDVEFIILASD 296

Query: 297 GLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLG 349
           GLWDYM SSD V +VR+QL++HG+VQLACE+LAQ ALD+ SQDNISI+IADLG
Sbjct: 297 GLWDYMKSSDVVSYVRDQLRKHGNVQLACESLAQVALDRRSQDNISIIIADLG 349

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q5JKN1|P2C05_ORYSJ Probable protein phosphatase 2C 5 OS=Oryza sativa subsp. japonica GN=Os01g0552300 PE=2 SV=1 Back     alignment and function description
>sp|Q69QZ0|P2C27_ORYSJ Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1 Back     alignment and function description
>sp|P36993|PPM1B_MOUSE Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1 Back     alignment and function description
>sp|O62830|PPM1B_BOVIN Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2 Back     alignment and function description
>sp|P35815|PPM1B_RAT Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1 Back     alignment and function description
>sp|Q5SMK6|P2C54_ORYSJ Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1 Back     alignment and function description
>sp|P49596|PP2C2_CAEEL Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=3 SV=2 Back     alignment and function description
>sp|Q8VZN9|P2C11_ARATH Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1 Back     alignment and function description
>sp|O75688|PPM1B_HUMAN Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
255588292390 protein phosphatase, putative [Ricinus c 0.974 0.889 0.767 1e-157
302143922 505 unnamed protein product [Vitis vinifera] 0.966 0.681 0.743 1e-148
225455338386 PREDICTED: protein phosphatase 2C 57 [Vi 0.966 0.891 0.743 1e-147
3643090401 protein phosphatase-2C [Mesembryanthemum 0.980 0.870 0.703 1e-143
224135107384 predicted protein [Populus trichocarpa] 0.966 0.895 0.722 1e-142
449456991387 PREDICTED: protein phosphatase 2C 57-lik 0.966 0.888 0.723 1e-142
356509229386 PREDICTED: protein phosphatase 2C 57-lik 0.971 0.896 0.719 1e-138
356516081388 PREDICTED: protein phosphatase 2C 57-lik 0.971 0.891 0.706 1e-136
388500942390 unknown [Medicago truncatula] 0.983 0.897 0.653 1e-134
15234274388 protein phosphatase 2C 57 [Arabidopsis t 0.969 0.889 0.651 1e-130
>gi|255588292|ref|XP_002534559.1| protein phosphatase, putative [Ricinus communis] gi|223525033|gb|EEF27824.1| protein phosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  559 bits (1440), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 270/352 (76%), Positives = 306/352 (86%), Gaps = 5/352 (1%)

Query: 1   MALLNQQLQRFLLTRLNY---NFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVA 57
           MAL + QL+RFLL++L+Y   NFK T   N  N    R  SQC  SAIAIDAPSSL+ VA
Sbjct: 1   MALFSPQLERFLLSKLHYGSSNFKTTSTKNLNNFVPVRPISQC--SAIAIDAPSSLTDVA 58

Query: 58  GIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAAL 117
           G+RWGS SLQG REEMED  +++SDGLDG+SFA VFDGHGG+S+V+FLRDELYKECVAAL
Sbjct: 59  GVRWGSASLQGAREEMEDYIIVRSDGLDGYSFAGVFDGHGGISSVEFLRDELYKECVAAL 118

Query: 118 QGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISH 177
           QGGLLLSGKDF+A +KAL EAFENVD KLLN LE   EEDESG+TATVMFIG ++L +SH
Sbjct: 119 QGGLLLSGKDFNATRKALTEAFENVDKKLLNWLETIGEEDESGSTATVMFIGNNMLIVSH 178

Query: 178 VGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFG 237
           +GD C+VLSR+GKA+VLT  HRPYGS +VSLQEI+RIREAGGWISNGRICGDIAVSRAFG
Sbjct: 179 IGDSCLVLSRSGKAEVLTESHRPYGSNKVSLQEIKRIREAGGWISNGRICGDIAVSRAFG 238

Query: 238 DIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDG 297
           DIRFKTKKNEML+KGV EGRWSEKF+SRVQ N DL+ ASPD+FQV+LGSDAEF++LASDG
Sbjct: 239 DIRFKTKKNEMLQKGVKEGRWSEKFISRVQFNGDLMTASPDVFQVALGSDAEFIMLASDG 298

Query: 298 LWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLG 349
           LWDYMNSSDAV FVRNQL+QHGDVQLACE LAQAALD  SQDN+SI+IADLG
Sbjct: 299 LWDYMNSSDAVSFVRNQLRQHGDVQLACEELAQAALDLRSQDNVSIIIADLG 350

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302143922|emb|CBI23027.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225455338|ref|XP_002276645.1| PREDICTED: protein phosphatase 2C 57 [Vitis vinifera] Back     alignment and taxonomy information
>gi|3643090|gb|AAC36700.1| protein phosphatase-2C [Mesembryanthemum crystallinum] Back     alignment and taxonomy information
>gi|224135107|ref|XP_002321985.1| predicted protein [Populus trichocarpa] gi|222868981|gb|EEF06112.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449456991|ref|XP_004146232.1| PREDICTED: protein phosphatase 2C 57-like [Cucumis sativus] gi|449517609|ref|XP_004165838.1| PREDICTED: protein phosphatase 2C 57-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356509229|ref|XP_003523353.1| PREDICTED: protein phosphatase 2C 57-like [Glycine max] Back     alignment and taxonomy information
>gi|356516081|ref|XP_003526725.1| PREDICTED: protein phosphatase 2C 57-like [Glycine max] Back     alignment and taxonomy information
>gi|388500942|gb|AFK38537.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|15234274|ref|NP_194509.1| protein phosphatase 2C 57 [Arabidopsis thaliana] gi|12643420|sp|P49599.2|P2C57_ARATH RecName: Full=Protein phosphatase 2C 57; Short=AtPP2C57; AltName: Full=Protein phosphatase 2C PPH1; Short=PP2C PPH1 gi|7269633|emb|CAB81429.1| protein phosphatase homolog (PPH1) [Arabidopsis thaliana] gi|19423901|gb|AAL87346.1| putative protein phosphatase homolog PPH1 [Arabidopsis thaliana] gi|21281245|gb|AAM45108.1| putative protein phosphatase homolog PPH1 [Arabidopsis thaliana] gi|332659993|gb|AEE85393.1| protein phosphatase 2C 57 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
TAIR|locus:2137400388 TAP38 "thylakoid-associated ph 0.969 0.889 0.620 5.3e-111
UNIPROTKB|E1BVM8382 PPM1A "Uncharacterized protein 0.497 0.463 0.345 1.9e-25
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.497 0.5 0.33 3.7e-25
WB|WBGene00011953356 ppm-2 [Caenorhabditis elegans 0.469 0.469 0.333 1.4e-24
ZFIN|ZDB-GENE-040426-2731433 ppm1na "protein phosphatase, M 0.491 0.404 0.343 1.5e-24
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.494 0.565 0.311 1.7e-23
TAIR|locus:2149363 447 AT5G24940 [Arabidopsis thalian 0.497 0.395 0.325 2.5e-23
CGD|CAL0004020345 PTC4 [Candida albicans (taxid: 0.671 0.692 0.306 7.8e-23
UNIPROTKB|Q59PS6345 PTC4 "Putative uncharacterized 0.671 0.692 0.306 7.8e-23
FB|FBgn0035425371 CG17746 [Drosophila melanogast 0.491 0.471 0.311 9.1e-23
TAIR|locus:2137400 TAP38 "thylakoid-associated phosphatase 38" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
 Identities = 219/353 (62%), Positives = 265/353 (75%)

Query:     1 MALLNQQLQRFLLTRLNYNFKPTVKNN---FVNTTTARAKSQCYCSAIAIDAPSSLSGVA 57
             MALL   L RF    L ++  P+        V  T  R +    CSAIAIDAPSSL+GV 
Sbjct:     1 MALLRPHLHRFHSNTLRHSAYPSADAGGGLVVYPTYGRHR----CSAIAIDAPSSLTGVT 56

Query:    58 GIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAAL 117
              IRWG  S+QG R+EMED  VI+SD +D FS+AAVFDGH G S+VKFLR+ELYKECV AL
Sbjct:    57 PIRWGYTSVQGFRDEMEDDIVIRSDAVDSFSYAAVFDGHAGSSSVKFLREELYKECVGAL 116

Query:   118 QGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNA-EEDESGATATVMFIGRDILFIS 176
             Q G LL+G DF AIK+AL +AFE+VD  LL  LE N  EEDESG+TATVM I  D+ FI+
Sbjct:   117 QAGSLLNGGDFAAIKEALIKAFESVDRNLLKWLEANGDEEDESGSTATVMIIRNDVSFIA 176

Query:   177 HVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAF 236
             H+GD C VLSR+G+ + LT+ HRPYGS + ++QE++R++EAGGWI NGRICGDIAVSRAF
Sbjct:   177 HIGDSCAVLSRSGQIEELTDYHRPYGSSRAAIQEVKRVKEAGGWIVNGRICGDIAVSRAF 236

Query:   237 GDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASD 296
             GDIRFKTKKN+MLKKGV+EGRWSEKFVSR++   D+V+A+PDIFQV L SD EF++LASD
Sbjct:   237 GDIRFKTKKNDMLKKGVDEGRWSEKFVSRIEFKGDMVVATPDIFQVPLTSDVEFIILASD 296

Query:   297 GLWDYMNSSDAVKFVRNQLQQHGDVXXXXXXXXXXXXXXHSQDNISIVIADLG 349
             GLWDYM SSD V +VR+QL++HG+V               SQDNISI+IADLG
Sbjct:   297 GLWDYMKSSDVVSYVRDQLRKHGNVQLACESLAQVALDRRSQDNISIIIADLG 349
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0009579 "thylakoid" evidence=IDA
GO:0009767 "photosynthetic electron transport chain" evidence=IMP
GO:0016791 "phosphatase activity" evidence=IDA
GO:0080005 "photosystem stoichiometry adjustment" evidence=IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0016311 "dephosphorylation" evidence=IMP
UNIPROTKB|E1BVM8 PPM1A "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00011953 ppm-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2731 ppm1na "protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
CGD|CAL0004020 PTC4 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59PS6 PTC4 "Putative uncharacterized protein PTC4" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
FB|FBgn0035425 CG17746 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5JKN1P2C05_ORYSJ3, ., 1, ., 3, ., 1, 60.64840.81740.7480yesno
P49599P2C57_ARATH3, ., 1, ., 3, ., 1, 60.65150.96910.8891yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.946
3rd Layer3.1.30.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00037237001
SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (386 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 7e-69
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 5e-68
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 4e-52
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-33
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 4e-32
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-31
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  216 bits (551), Expect = 7e-69
 Identities = 100/291 (34%), Positives = 150/291 (51%), Gaps = 38/291 (13%)

Query: 59  IRWGSVSLQGLREEMEDGAVIQSD-GLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAAL 117
              G     G R+  ED  VI+ +   +      VFDGHGG +  +F    L +E +  L
Sbjct: 1   FSAGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEEL 60

Query: 118 QGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISH 177
           +  L LS +D   I++AL++AF   D ++L   +   ++  SG TA V  I  + L++++
Sbjct: 61  EETLTLSEED---IEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVAN 117

Query: 178 VGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFG 237
           VGD   VL R G+A  LT  H+P     V+ +E  RI +AGG +SNGR+ G +AV+RA G
Sbjct: 118 VGDSRAVLCRNGEAVQLTKDHKP-----VNEEERERIEKAGGRVSNGRVPGVLAVTRALG 172

Query: 238 DIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDG 297
           D   K                              V A PD+  V L  D +F++LASDG
Sbjct: 173 DFDLKP----------------------------GVSAEPDVTVVKLTEDDDFLILASDG 204

Query: 298 LWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADL 348
           LWD +++ +AV  VR++L +  D+Q A + L   AL + S DNI++V+  L
Sbjct: 205 LWDVLSNQEAVDIVRSELAKE-DLQEAAQELVDLALRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 356
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.98
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.97
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.89
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.85
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.76
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.67
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.55
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.63
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.1e-51  Score=395.46  Aligned_cols=260  Identities=30%  Similarity=0.481  Sum_probs=224.7

Q ss_pred             CCeeEEEEeccCCCCCCCceEEEeeCC----------CCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCccCCCC
Q 018392           57 AGIRWGSVSLQGLREEMEDGAVIQSDG----------LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGK  126 (356)
Q Consensus        57 ~~~~~~~~s~~G~r~~nED~~~~~~~~----------~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~  126 (356)
                      ..++++..|++|.|+.|||++++..+.          .....||||||||||+.+++++++++++.+.+...        
T Consensus        63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~--------  134 (365)
T PLN03145         63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDED--------  134 (365)
T ss_pred             CceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhc--------
Confidence            457889999999999999998875431          12357999999999999999999999998865321        


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCceEEEEEEeCCeEEEEEeccccEEEecCCceeecCCCCcCCCCCCC
Q 018392          127 DFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQV  206 (356)
Q Consensus       127 ~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~ianvGDSra~l~r~g~~~~lt~dH~~~~~~~~  206 (356)
                      ....++++|.++|.++|+.|....... ....+|||++++++.++.+|++|+||||+|++++|++++||+||++.+    
T Consensus       135 ~~~~~~~al~~af~~~d~~~~~~~~~~-~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~----  209 (365)
T PLN03145        135 FPREIEKVVSSAFLQTDTAFAEACSLD-ASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMC----  209 (365)
T ss_pred             cchhHHHHHHHHHHHHhHHHHhhhccc-cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCC----
Confidence            224678889999999999987653322 234599999999999999999999999999999999999999999987    


Q ss_pred             CHHHHHHHHHcCCEEeCCeeeceecccccccCcccccchhhhhhcccCCCccccchhcccccCCCcEEeeceEEEEEecC
Q 018392          207 SLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGS  286 (356)
Q Consensus       207 ~~~E~~Ri~~~gg~v~~~rv~g~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~  286 (356)
                       +.|+.||++.||+|.++|+.|.+.+||||||+.+|..+                     ...+..++++|++..+++.+
T Consensus       210 -~~E~~RI~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k---------------------~~~~~~vs~ePdv~~~~l~~  267 (365)
T PLN03145        210 -SKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMK---------------------GSDGGPLSAEPELMTTQLTE  267 (365)
T ss_pred             -HHHHHHHHHcCCceecceECCccccccccccccccccc---------------------cccCCCcceEEEEEEEECCC
Confidence             89999999999999999999999999999998887311                     01123467899999999999


Q ss_pred             CCeEEEEEcCCCcCCCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCC
Q 018392          287 DAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYA  351 (356)
Q Consensus       287 ~~d~lvL~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~l~~~A~~~g~~DNiTvIvv~l~~~  351 (356)
                      +|+|||||||||||+|+++++++++++.+....+++++|+.|++.|+++++.||||||||+|+..
T Consensus       268 ~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~  332 (365)
T PLN03145        268 EDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQ  332 (365)
T ss_pred             CCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecC
Confidence            98899999999999999999999999888888899999999999999999999999999999863

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 5e-27
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 7e-25
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 8e-25
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 4e-23
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 3e-13
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 3e-13
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-13
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-13
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 3e-13
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 3e-13
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 3e-13
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 3e-13
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 4e-13
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 4e-13
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 1e-11
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 1e-11
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 3e-09
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 1e-08
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 7e-04
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure 
Iteration: 1

 Score =  118 bits (295), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 34/297 (11%)
Query: 58  GIRWGSVSLQGLREEMEDG--AVIQ-SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECV 114
           G+R+G  S+QG R EMED   AV+    GL+ +SF AV+DGH G     +    L +   
Sbjct: 23  GLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHIT 82
Query: 115 ------AALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFI 168
                 AA + G  L     + +K  ++  F  +D  + N  ++    D SG+TA  + I
Sbjct: 83  TNEDFRAAGKSGSALE-LSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMI 141
Query: 169 GRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICG 228
               ++  + GD   VL R G+    T  H+P      + +E  RI+ AGG +   R+ G
Sbjct: 142 SPKHIYFINCGDSRAVLYRNGQVCFSTQDHKP-----CNPREKERIQNAGGSVMIQRVNG 196
Query: 229 DIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDA 288
            +AVSRA GD  +K        KG  E                LV   P+++++    + 
Sbjct: 197 SLAVSRALGDYDYKCVDG----KGPTE---------------QLVSPEPEVYEILRAEED 237
Query: 289 EFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVXXXXXXXXXXXXXXHSQDNISIVI 345
           EF++LA DG+WD M++ +  ++V+++L+   D+               S+DN+SIV+
Sbjct: 238 EFIILAXDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVL 294
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 3e-94
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 7e-94
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 3e-83
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 5e-79
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 7e-72
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 4e-71
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 4e-70
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-64
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 4e-55
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 9e-50
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 3e-49
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 9e-47
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-41
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 3e-14
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 1e-07
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 2e-07
1txo_A237 Putative bacterial enzyme; serine/threonine protei 4e-07
1txo_A237 Putative bacterial enzyme; serine/threonine protei 4e-04
3rnr_A211 Stage II sporulation E family protein; structural 3e-05
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
 Score =  285 bits (730), Expect = 3e-94
 Identities = 80/302 (26%), Positives = 130/302 (43%), Gaps = 28/302 (9%)

Query: 51  SSLSGVAGIRWGSVSLQGLREEMEDGAVIQ---SDGLDGFSFAAVFDGHGGVSTVKFLRD 107
           ++     G+R+G  S+QG R EMED          GL+ +SF AV+DGH G    K+  +
Sbjct: 14  NAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCE 73

Query: 108 ELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMF 167
            L                   + +K  ++  F  +D  +    E     D SG+TA  + 
Sbjct: 74  HLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVL 133

Query: 168 IGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRIC 227
           I     +  + GD   +L R  K    T  H+P         E  RI+ AGG +   R+ 
Sbjct: 134 ISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPL-----EKERIQNAGGSVMIQRVN 188

Query: 228 GDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSL-GS 286
           G +AVSRA GD  +K    +                      + LV   P++  +     
Sbjct: 189 GSLAVSRALGDFDYKCVHGKGPT-------------------EQLVSPEPEVHDIERSEE 229

Query: 287 DAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIA 346
           D +F++LA DG+WD M + +   FVR++L+   D++  C  +    L + S+DN+S+++ 
Sbjct: 230 DDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILI 289

Query: 347 DL 348
             
Sbjct: 290 CF 291
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.87
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.86
3f79_A255 Probable two-component response regulator; adaptor 99.77
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.74
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.36
3eq2_A394 Probable two-component response regulator; adaptor 98.72
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=2.3e-52  Score=394.33  Aligned_cols=274  Identities=28%  Similarity=0.503  Sum_probs=227.6

Q ss_pred             CCCeeEEEEeccCCCCCCCceEEEeeCCC---CCeEEEEEEcCCCChhHHHHHHHHHHHHHHHH--HhcCc---cCCCCC
Q 018392           56 VAGIRWGSVSLQGLREEMEDGAVIQSDGL---DGFSFAAVFDGHGGVSTVKFLRDELYKECVAA--LQGGL---LLSGKD  127 (356)
Q Consensus        56 ~~~~~~~~~s~~G~r~~nED~~~~~~~~~---~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~--l~~~~---~~~~~~  127 (356)
                      ...+.+++++++|+|+.|||++++.....   .++.+|+|||||||+.+++++++.+.+.+.+.  +....   ......
T Consensus        21 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~~  100 (307)
T 2p8e_A           21 GNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELS  100 (307)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------C
T ss_pred             CCCeeEEEEecCCCCCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhccccccccccc
Confidence            35789999999999999999998765322   35679999999999999999999999888642  21100   001123


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCceEEEEEEeCCeEEEEEeccccEEEecCCceeecCCCCcCCCCCCCC
Q 018392          128 FDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVS  207 (356)
Q Consensus       128 ~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~ianvGDSra~l~r~g~~~~lt~dH~~~~~~~~~  207 (356)
                      ...+.+.|.++|..+|+.|....+.......+|||++++++.++++|++|+||||+|++|+|++.+||+||++.+     
T Consensus       101 ~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~-----  175 (307)
T 2p8e_A          101 VENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCN-----  175 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTS-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCC-----
Confidence            567889999999999999987543333456799999999999999999999999999999999999999999987     


Q ss_pred             HHHHHHHHHcCCEEeCCeeeceecccccccCcccccchhhhhhcccCCCccccchhcccccCCCcEEeeceEEEEEecCC
Q 018392          208 LQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSD  287 (356)
Q Consensus       208 ~~E~~Ri~~~gg~v~~~rv~g~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~~  287 (356)
                      +.|..||.++||++..+|++|.+.+||||||..+|....                   .++.+++|+++|++..+++.++
T Consensus       176 ~~E~~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~-------------------~~~~~~~v~~~pdv~~~~l~~~  236 (307)
T 2p8e_A          176 PREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDG-------------------KGPTEQLVSPEPEVYEILRAEE  236 (307)
T ss_dssp             HHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTT-------------------CCGGGSSSBCCCEEEEEECCTT
T ss_pred             HHHHHHHHHcCCEEEeCcccCeEeccccccCHHHhcCcc-------------------cCCCCCeEeccCeEEEEEcCCC
Confidence            899999999999999999999999999999999884221                   1234477889999999999998


Q ss_pred             CeEEEEEcCCCcCCCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCcc
Q 018392          288 AEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASV  353 (356)
Q Consensus       288 ~d~lvL~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~l~~~A~~~g~~DNiTvIvv~l~~~~~  353 (356)
                      |+|||||||||||+|+++|+++++.+.+....+++.+|+.|++.|+++|+.||||||||++....+
T Consensus       237 d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~  302 (307)
T 2p8e_A          237 DEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNEGH  302 (307)
T ss_dssp             EEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC-----
T ss_pred             CeEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCCCc
Confidence            669999999999999999999999877666789999999999999999999999999999986543
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 356
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 6e-52
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 3e-23
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (436), Expect = 6e-52
 Identities = 79/302 (26%), Positives = 131/302 (43%), Gaps = 28/302 (9%)

Query: 51  SSLSGVAGIRWGSVSLQGLREEMEDGAVIQSD---GLDGFSFAAVFDGHGGVSTVKFLRD 107
           ++     G+R+G  S+QG R EMED          GL+ +SF AV+DGH G    K+  +
Sbjct: 13  NAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCE 72

Query: 108 ELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMF 167
            L                   + +K  ++  F  +D  +    E     D SG+TA  + 
Sbjct: 73  HLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVL 132

Query: 168 IGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRIC 227
           I     +  + GD   +L R  K    T  H+P      +  E  RI+ AGG +   R+ 
Sbjct: 133 ISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKP-----SNPLEKERIQNAGGSVMIQRVN 187

Query: 228 GDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSD 287
           G +AVSRA GD  +K    +   +                    LV   P++  +    +
Sbjct: 188 GSLAVSRALGDFDYKCVHGKGPTE-------------------QLVSPEPEVHDIERSEE 228

Query: 288 A-EFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIA 346
             +F++LA DG+WD M + +   FVR++L+   D++  C  +    L + S+DN+S+++ 
Sbjct: 229 DDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILI 288

Query: 347 DL 348
             
Sbjct: 289 CF 290
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-56  Score=414.05  Aligned_cols=273  Identities=29%  Similarity=0.493  Sum_probs=242.4

Q ss_pred             CCCCeeEEEEeccCCCCCCCceEEEeeCC---CCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHHH
Q 018392           55 GVAGIRWGSVSLQGLREEMEDGAVIQSDG---LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAI  131 (356)
Q Consensus        55 ~~~~~~~~~~s~~G~r~~nED~~~~~~~~---~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~  131 (356)
                      ....++||+++.+|+|++|||++.+....   .+++.||||||||||+.+++++++++++.+.+.+...........+.+
T Consensus        17 ~~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~   96 (295)
T d1a6qa2          17 QGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENV   96 (295)
T ss_dssp             EETTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHH
T ss_pred             cCCceEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHH
Confidence            34678999999999999999998876543   345789999999999999999999999998765543333345566789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCcCCCCceEEEEEEeCCeEEEEEeccccEEEecCCceeecCCCCcCCCCCCCCHHHH
Q 018392          132 KKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEI  211 (356)
Q Consensus       132 ~~~l~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~ianvGDSra~l~r~g~~~~lt~dH~~~~~~~~~~~E~  211 (356)
                      .++|.++|.++++.+..+.+.......+|||++++++.++++|+||+||||+|++++|++++||.||++.+     +.|+
T Consensus        97 ~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~-----~~E~  171 (295)
T d1a6qa2          97 KNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSN-----PLEK  171 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTS-----HHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCccc-----HHHH
Confidence            99999999999999988877777788899999999999999999999999999999999999999999987     8999


Q ss_pred             HHHHHcCCEEeCCeeeceecccccccCcccccchhhhhhcccCCCccccchhcccccCCCcEEeeceEEEEEecC-CCeE
Q 018392          212 RRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGS-DAEF  290 (356)
Q Consensus       212 ~Ri~~~gg~v~~~rv~g~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~-~~d~  290 (356)
                      +||++.||+|..+|++|.+.+||||||+.+|....                   ..+..++|++.|++..+.+.. +++|
T Consensus       172 ~Ri~~~gg~v~~~r~~g~l~~tRa~Gd~~~k~~~~-------------------~~~~~~~v~~~Pdi~~~~~~~~~~~f  232 (295)
T d1a6qa2         172 ERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHG-------------------KGPTEQLVSPEPEVHDIERSEEDDQF  232 (295)
T ss_dssp             HHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTT-------------------CCGGGSSSBCCCEEEEEECCTTTEEE
T ss_pred             hhHhhcCCcccccccCCceeeeeccCcHHhhhccc-------------------cCcccccccccccceEEEeeccccee
Confidence            99999999999999999999999999999985321                   234457889999999999864 4579


Q ss_pred             EEEEcCCCcCCCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCC
Q 018392          291 VLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYA  351 (356)
Q Consensus       291 lvL~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~l~~~A~~~g~~DNiTvIvv~l~~~  351 (356)
                      ||||||||||+|+++|++++|++.+....+++.+|+.|++.|+++++.||||||||+|...
T Consensus       233 lvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~  293 (295)
T d1a6qa2         233 IILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNA  293 (295)
T ss_dssp             EEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTS
T ss_pred             EeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccCC
Confidence            9999999999999999999999888888999999999999999999999999999999864
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure