Citrus Sinensis ID: 018404

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350------
Protein Sequence
MAANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE
Secondary Structure (PSIPRED)
cccccccEEEEEEEEcccccccccccccEEEEEEccccccccccEEEEEEEEEEccccccccccccccccccccccccEEEccEEEEEEEccccccccccEEEEccccEEEEEEcccccccccccccccHHHHcccccccHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHcccccccHHHHHHHHHHHccccEEEcccccccHHHHHHHHccccccEEccccccHHHHHHHHHHHcccEEEEEccccccccccccccccHHHHHHHHEEEEEEEEccccccHHHHHHHHHHHHHcccEEEEEEHHHcccHHHHHHHHccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEEcccccccccccccEEEEEEccccccccccEEEEEEEEEEccccccccccccccccccccccccEEEccEEEEEEEccccccccccEEEEccccHEEEEEcccccEEEcccccccHHHHHHHcccccHHHHHHHHHccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHHccccHHEcccccccHHHHHHHHcccccEEEEEcccHHHHHHHHHHHcccccEEEEHHEEccccccccccHHHHHHHHHHHEEcEEEEEcHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHcHHHHHHHHccccccEEEEEEccc
Coil and Loop (DISEMBL)
maansevlSNKQVILKNYvegfpketDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMrarmsfnqdpdfssftpgspiegfgvakvvdsghpefkkgdlvwgttgweeysliknpqglfkihhtdvplsyytgilgmpgmtawagfyeicapkkgeyIYVSAASGAVGQLVGQFAKLMGCYvvgsagsrekvwlIPMQSQLVELLKnkfgfddafnykeeNDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACgmisqynlsqpegvHNLMNVVYKRIRMegfvvfdyfpqysrFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE
Flexible Loop (DISEMBL)
maansevlsnkqVILKNYVEGFPKETDMLVKASSISlkveegsnaILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVglfsgrnvgkQLVVVSRE
Low Complexity Region (SEG)
MAANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE
Disordered region (IsUnstruct)
***********QVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF*************PIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV****
Disordered Region (DISOPRED)
*********NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR*
Disordered Region (DISEMBL)
********SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE
Disordered Region (DISPRO)
*******LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	356	2.2.26 [Sep-21-2011]
Q39172	345	NADP-dependent alkenal do	no	no	0.946	0.976	0.685	1e-145
Q39173	343	NADP-dependent alkenal do	no	no	0.941	0.976	0.686	1e-143
Q6WAU0	342	(+)-pulegone reductase OS	N/A	no	0.946	0.985	0.636	1e-131
Q9C0Y6	349	Zinc-type alcohol dehydro	yes	no	0.938	0.957	0.432	6e-66
O34812	339	Putative NADP-dependent o	yes	no	0.921	0.967	0.387	6e-59
Q91YR9	329	Prostaglandin reductase 1	yes	no	0.901	0.975	0.396	4e-58
P76113	345	NADPH-dependent curcumin	N/A	no	0.912	0.942	0.374	3e-57
Q3SZJ4	329	Prostaglandin reductase 1	yes	no	0.890	0.963	0.394	7e-57
P97584	329	Prostaglandin reductase 1	yes	no	0.890	0.963	0.383	8e-57
Q9EQZ5	329	Prostaglandin reductase 1	yes	no	0.893	0.966	0.387	9e-57

>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1

 Score =  514 bits (1323), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 242/353 (68%), Positives = 293/353 (83%), Gaps = 16/353 (4%)

Query: 9   SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
           +NKQVILK+YV GFP E+D     +++ L+V EG+N++LVKNLYLSCDPYMR RM    D
Sbjct: 4   TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMG-KPD 62

Query: 69  PDFSS----FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKN-PQGLFKI 123
           P  ++    +TPG PI+G+GV+++++SGHP++KKGDL+WG   WEEYS+I       FKI
Sbjct: 63  PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI 122

Query: 124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
            HTDVPLSYYTG+LGMPGMTA+AGFYE+C+PK+GE +YVSAASGAVGQLVGQ AK+MGCY
Sbjct: 123 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY 182

Query: 184 VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEH 243
           VVGSAGS+EKV          +LLK KFGFDDAFNYKEE+DL AALKRCFP GIDIYFE+
Sbjct: 183 VVGSAGSKEKV----------DLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFEN 232

Query: 244 VGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQ 303
           VGGKMLDAVL+NM +HGRIA CGMISQYNL   EGVHNL N++YKRIR++GFVV D++ +
Sbjct: 233 VGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDK 292

Query: 304 YSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
           YS+FL+ VLP+IREGK+ YVEDVADGLE AP ALVGLF G+NVGKQ+VVV+RE
Sbjct: 293 YSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4

>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2

 Score =  506 bits (1304), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 243/354 (68%), Positives = 292/354 (82%), Gaps = 19/354 (5%)

Query: 9   SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
           +NKQVI K++V GFPKE+D     +++ L+V EGS ++LVKNLYLSCDPYMR+RM     
Sbjct: 3   TNKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKSVLVKNLYLSCDPYMRSRMG---K 59

Query: 69  PDFSS-----FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGL-FK 122
           PD SS     + PG PI G+GV++V++SGHP++KKGDL+WG  GWEEYS+I     + FK
Sbjct: 60  PDPSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFK 119

Query: 123 IHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
           I HTDVPLSYYTG+LGMPGMTA+AGFYE+C+PKKGE +YVSAASGAVGQLVGQFAK+MGC
Sbjct: 120 IQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGC 179

Query: 183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
           YVVGSAGS+EKV          +LLK KFGFDDAFNYKEE+DL AALKRCFP+GID+YFE
Sbjct: 180 YVVGSAGSKEKV----------DLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFE 229

Query: 243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP 302
           +VGGKMLDAVLLNM  HGRIA CGMISQYNL   EGVHNL N++YKRIR++GFVV D++ 
Sbjct: 230 NVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYD 289

Query: 303 QYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
           +Y +FL+ VLP I+EGK+ YVEDVADGLE AP ALVGLF G+NVGKQ+VV++RE
Sbjct: 290 KYPKFLELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1

 Score =  469 bits (1208), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/349 (63%), Positives = 284/349 (81%), Gaps = 12/349 (3%)

Query: 10  NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSN-AILVKNLYLSCDPYMRARMSFNQD 68
           NKQ++L NY+ G  K++D+ ++ S+I +++ +G N AILVKNLYLS +PY+  RM     
Sbjct: 4   NKQIVLNNYINGSLKQSDLALRTSTICMEIPDGCNGAILVKNLYLSVNPYLILRMGKLDI 63

Query: 69  PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT-TGWEEYSLIKNPQGLFKIHHTD 127
           P F S  PGS I  +GV+KV+DS HP ++KG+L+WG+  GWEEY+LI+NP  LFKI   D
Sbjct: 64  PQFDSILPGSTIVSYGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQDKD 123

Query: 128 VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS 187
           VPLSYY GILGMPGMTA+AGF+EIC+PKKGE ++V+AA+G+VGQLVGQFAK+ GCYVVGS
Sbjct: 124 VPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYVVGS 183

Query: 188 AGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK 247
           AGS+EKV          +LLKNKFGFDDAFNYKEE+D D ALKR FPEGIDIYF++VGGK
Sbjct: 184 AGSKEKV----------DLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGK 233

Query: 248 MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRF 307
           ML+AV+ NMR+HGRIA CGM+SQY+L QPEGVHNL+ ++ K+IRM+GFVV DY+  Y +F
Sbjct: 234 MLEAVINNMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKF 293

Query: 308 LDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
           L+ VLP I+EGKV YVED+++GLE+AP+AL+G++ GRNVG Q+V VSRE
Sbjct: 294 LEMVLPRIKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342

Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 1

>sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1

 Score =  251 bits (641), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 158/365 (43%), Positives = 214/365 (58%), Gaps = 31/365 (8%)

Query: 7   VLSNKQVILKNYVE---GFPKETDMLV-KASSISL---KVEEGSNAILVKNLYLSCDPYM 59
           ++SN  VI+K Y++   G+P   + L  +     L   +V+E    +L+KN+Y S DPY+
Sbjct: 1   MVSNNAVIIKKYLDSTAGYPVIGEHLAFEKREFDLENAQVDE-ETPVLLKNIYTSVDPYL 59

Query: 60  RARMSFNQDPDFSSFTP----GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI- 114
           R RM   Q P  +S+ P    G P     VAKVV S   ++K G  V   +GWEEY+ + 
Sbjct: 60  RMRM---QSPKHASYIPPLELGKPFYNSTVAKVVKSTLDQYKPGMDVVFVSGWEEYTFVS 116

Query: 115 KNPQGLFKIHHT--DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQL 172
           K   G  +  +    +PL  + G LGMP  TA+ G   I  PK GE IY+SAASGAVGQ+
Sbjct: 117 KQALGFLQPINNPYKLPLIDFVGSLGMPSQTAYCGLKHIGKPKAGETIYISAASGAVGQM 176

Query: 173 VGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC 232
            GQ AK MG +VVGS GS EK + I + S          G+D  FNYK+E+   A L R 
Sbjct: 177 AGQLAKAMGLHVVGSVGSDEK-FKICLDS----------GYDSVFNYKKESPFKA-LPRL 224

Query: 233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRM 292
            P+GIDIYFE+VGG+ +DAVL NM L GRI  CG ISQYN   P  V NL  V+ K + +
Sbjct: 225 CPKGIDIYFENVGGETMDAVLENMNLQGRIIFCGAISQYNNPNPYRVKNLGMVLVKSLTI 284

Query: 293 EGFVVFDYFPQYS-RFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
           +GF+V +  PQY  ++ + +   I EGK+ Y  DV DGLE+AP A +G+  G+N GK +V
Sbjct: 285 QGFIVANILPQYQEQYFEEMPKLIAEGKIKYKCDVYDGLESAPEAFIGMLQGKNSGKTIV 344

Query: 352 VVSRE 356
            ++ E
Sbjct: 345 KIADE 349

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1

 Score =  228 bits (581), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/351 (38%), Positives = 190/351 (54%), Gaps = 23/351 (6%)

Query: 9   SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
           S +Q+ L    +G P   D   +   +    E     +LVK LY+S DPYMR RM   QD
Sbjct: 4   SQQQIQLARRPQGIPVHEDFRFETIPVP---EPKQGEVLVKTLYVSVDPYMRGRM---QD 57

Query: 69  PD--FSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHT 126
                  F     + G  +A+VV  G+   KKGD+V G   W+E+S +     L KI  +
Sbjct: 58  TKSYVEPFALDKALSGGVIAEVVSDGN-HLKKGDIVIGNLSWQEFSAVSE-SALRKIDTS 115

Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
             P S Y GILGM G+TA+ G  +I  PK+GE + VS A+GAVG  VGQ AK+ G  VVG
Sbjct: 116 LAPASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVG 175

Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
            AGS EK          ++ LK +  FD+A NYK  +D+  AL+   P+G+D+YF++VGG
Sbjct: 176 IAGSDEK----------IDYLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGG 225

Query: 247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPE---GVHNLMNVVYKRIRMEGFVVFDYFPQ 303
            + DAV+  +    RI  CG IS YN        G      ++  +  M+GF+V DY  +
Sbjct: 226 PISDAVMNLLNEFARIPVCGAISSYNAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDR 285

Query: 304 YSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS 354
           +S     +  +++ GK+ Y E + +G EN P A +GLF G N GKQL+ VS
Sbjct: 286 FSEGAKQLAEWLKAGKLHYEETITEGFENIPDAFLGLFKGENKGKQLIKVS 336

Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2

 Score =  225 bits (573), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/351 (39%), Positives = 199/351 (56%), Gaps = 30/351 (8%)

Query: 7   VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN 66
           ++  K   LK + EGFP + +  +K + +       +  +L++ L+LS DPYMR      
Sbjct: 1   MVQAKSWTLKKHFEGFPTDGNFELKTTELP---PLNNGEVLLEALFLSVDPYMRVAAK-- 55

Query: 67  QDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI--- 123
                     G  + G  VA+VV+S +  F KG +V    GW  +S I +  GL K+   
Sbjct: 56  ------KLKEGDRMMGEQVARVVESKNSAFPKGTIVAALLGWTSHS-ISDGNGLTKLPVE 108

Query: 124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
               +PLS   G +GMPG+TA+ G  +IC  K GE + VSAA+GAVG +VGQ AKL GC 
Sbjct: 109 WPDKLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLKGCK 168

Query: 184 VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEH 243
           VVG+AGS EKV  +            K GFD AFNYK    L+ AL+   P+G D YF++
Sbjct: 169 VVGTAGSDEKVAYL-----------KKLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDN 217

Query: 244 VGGKMLDAVLLNMRLHGRIAACGMISQYNLSQ--PEGVHNLMNVVYKRIRMEGFVVFDYF 301
           VGG+  +AV+L M+  GRIA CG ISQYN +   P+G    + V+Y+++RMEGF+V  + 
Sbjct: 218 VGGEFSNAVILQMKTFGRIAICGAISQYNRTGPCPQGPAPEV-VIYQQLRMEGFIVNRWQ 276

Query: 302 PQY-SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
            +   + L  ++ ++ EGKV   E V +G E  PAA +G+  G N+GK +V
Sbjct: 277 GEVRQKALTELMNWVSEGKVQCHEYVTEGFEKMPAAFMGMLKGENLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P76113|CURA_ECOLI NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3

 Score =  222 bits (566), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/355 (37%), Positives = 200/355 (56%), Gaps = 30/355 (8%)

Query: 10  NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP 69
           N++ +L +   G P   +  ++   ++     G   +L++ +YLS DPYMR RMS     
Sbjct: 8   NRRWVLASRPHGAPVPENFRLEEDDVATP---GEGQVLLRTVYLSLDPYMRGRMS----- 59

Query: 70  DFSSFTP----GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHH 125
           D  S++P    G  + G  V++VV+S HP+++ GD V G +GW++Y  I +   L K+  
Sbjct: 60  DEPSYSPPVDIGGVMVGGTVSRVVESNHPDYQSGDWVLGYSGWQDYD-ISSGDDLVKLGD 118

Query: 126 TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVV 185
                S+  G+LGMPG TA+ G  +I  PK+GE + V+AA+G VG  VGQ  KL GC VV
Sbjct: 119 HPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVV 178

Query: 186 GSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG 245
           G AG  EK           E+L    GFD   ++   +D    L +  P+GIDIY+E+VG
Sbjct: 179 GVAGGAEKC------RHATEVL----GFDVCLDH-HADDFAEQLAKACPKGIDIYYENVG 227

Query: 246 GKMLDAVLLNMRLHGRIAACGMISQYNLSQ-PEGVHNL----MNVVYKRIRMEGFVVF-D 299
           GK+ DAVL  +    RI  CG++S YN ++ P G   L      V+ KRIR++GF++  D
Sbjct: 228 GKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQD 287

Query: 300 YFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS 354
           Y  +   F   +  +++E K+ Y E++ DGLENAP   +GL  G+N GK ++ V+
Sbjct: 288 YGHRIHEFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNFGKVVIRVA 342

Catalyzes the metal-independent reduction of curcumin to dihydrocurcumin (DHC) as an intermediate product, followed by further reduction to tetrahydrocurcumin (THC) as an end product. It also acts on 3-octene-2-one, 3-hepten-2-one, resveratrol, and trans-2-octenal.

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 3

>sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1

 Score =  221 bits (563), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 137/347 (39%), Positives = 193/347 (55%), Gaps = 30/347 (8%)

Query: 11  KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPD 70
           K   LK +  G+P  +D  +K   +   +++G   +L++ LYL+ DPYMR          
Sbjct: 5   KSWTLKKHFVGYPTNSDFELKTVELP-PLKDGE--VLLEALYLTVDPYMRIMAK------ 55

Query: 71  FSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHT---D 127
             S   G  + G  VA+VV+S +  F  G +V   +GW  +S I N + L K+       
Sbjct: 56  --SLKEGDMMMGEQVARVVESKNSAFPTGTIVLAPSGWTTHS-ISNGEKLEKVLAEWPDT 112

Query: 128 VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS 187
           +PLS   G +GMPG+TA+ G  +IC  K GE + VSAA+GAVG +VGQ AKL GC VVG+
Sbjct: 113 LPLSLALGTVGMPGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKGCKVVGT 172

Query: 188 AGSREKV-WLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
           AGS EKV WL             K GFD A NYK    L+ ALK   PEG D YF++VGG
Sbjct: 173 AGSDEKVAWL------------KKHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGG 220

Query: 247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMN-VVYKRIRMEGFVVFDYFPQY- 304
           +  +  +  M+  GRIA CG IS YN + P         +++K + ++GFVV+ +  +  
Sbjct: 221 EFSNVAITQMKKFGRIAICGAISVYNRTSPLSPGPSPEIIIFKELHLQGFVVYRWQGEVR 280

Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
            + L  +L ++ EGK+ Y E V +G EN PAA +GL  G N+GK +V
Sbjct: 281 QKALRDLLKWVSEGKIQYHEHVTEGFENMPAAFIGLLKGENLGKAIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3

 Score =  221 bits (562), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 133/347 (38%), Positives = 196/347 (56%), Gaps = 30/347 (8%)

Query: 11  KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPD 70
           K   LK + EGFP +++  ++ + +       +  +L++ L+LS DPYMR          
Sbjct: 5   KTWTLKKHFEGFPTDSNFELRTTELP---PLNNGEVLLEALFLSVDPYMRVAAK------ 55

Query: 71  FSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHT---D 127
                 G  + G  VA+VV+S +  F  G +V    GW  +S I +  GL K+       
Sbjct: 56  --KLKEGDSMMGEQVARVVESKNSAFPTGTIVVALLGWTSHS-ISDGNGLRKLPAEWPDK 112

Query: 128 VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS 187
           +PLS   G +GMPG+TA+ G  +IC  K GE + V+AA+GAVG +VGQ AKL GC VVG+
Sbjct: 113 LPLSLALGTVGMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCKVVGT 172

Query: 188 AGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK 247
           AGS EKV  +            K GFD AFNYK    L+ AL+   P+G D YF++VGG+
Sbjct: 173 AGSDEKVAYL-----------KKLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGE 221

Query: 248 MLDAVLLNMRLHGRIAACGMISQYNLSQ--PEGVHNLMNVVYKRIRMEGFVVFDYFPQY- 304
             + V+L M+  GRIA CG ISQYN +   P G    + ++Y+++RMEGF+V  +  +  
Sbjct: 222 FSNTVILQMKTFGRIAICGAISQYNRTGPCPPGPSPEV-IIYQQLRMEGFIVTRWQGEVR 280

Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
            + L  ++ ++ EGK+ Y E + +G E  PAA +G+  G N+GK +V
Sbjct: 281 QKALTDLMNWVSEGKIRYHEYITEGFEKMPAAFMGMLKGDNLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9EQZ5|PTGR1_CAVPO Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1

 Score =  221 bits (562), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 135/348 (38%), Positives = 199/348 (57%), Gaps = 30/348 (8%)

Query: 11  KQVILKNYVEGFPKETDMLVKASSIS-LKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP 69
           K   LK + +G P ++D  +K   +  LK  E    +L++ L+LS DPYMR         
Sbjct: 5   KSWTLKKHFQGKPTQSDFELKTVELPPLKNGE----VLLEALFLSVDPYMRIASK----- 55

Query: 70  DFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHT--- 126
                  G+ + G  VA+VV+S +  F  G +V   +GW  +  I + +GL K+      
Sbjct: 56  ---RLKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTH-FISDGKGLEKLLTEWPD 111

Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
            +PLS   G +GMPG+TA+ G  E+C  K GE + VSAA+GAVG +VGQ AKL GC VVG
Sbjct: 112 KLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVG 171

Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
           +AGS EK+  +            + GFD AFNYK  N L+ ALK+  P+G D YF++VGG
Sbjct: 172 AAGSDEKIAYL-----------KQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 220

Query: 247 KMLDAVLLNMRLHGRIAACGMISQYN-LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY- 304
           + L+ VL  M+  G+IA CG IS YN + Q     +  +++YK++R+EGF+V+ +     
Sbjct: 221 EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVR 280

Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV 352
            + L  ++ ++ EGK+ Y E V  G EN PAA + + +G N+GK +V 
Sbjct: 281 EKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVT 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	356
255577881	368	alcohol dehydrogenase, putative [Ricinus	0.971	0.940	0.740	1e-155
225434189	345	PREDICTED: NADP-dependent alkenal double	0.966	0.997	0.731	1e-153
224092844	352	predicted protein [Populus trichocarpa]	0.971	0.982	0.737	1e-151
255577879	352	alcohol dehydrogenase, putative [Ricinus	0.971	0.982	0.726	1e-151
225434197	345	PREDICTED: NADP-dependent alkenal double	0.966	0.997	0.714	1e-147
224092846	351	predicted protein [Populus trichocarpa]	0.952	0.965	0.733	1e-147
224813796	347	2-alkenal reductase [Artemisia annua]	0.971	0.997	0.689	1e-146
225434191	342	PREDICTED: NADP-dependent alkenal double	0.952	0.991	0.716	1e-146
444302246	351	Chain A, X-ray Crystal Structure Of A Do	0.960	0.974	0.715	1e-146
6692816	343	allyl alcohol dehydrogenase [Nicotiana t	0.960	0.997	0.715	1e-146

>gi|255577881|ref|XP_002529813.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530690|gb|EEF32562.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 265/358 (74%), Positives = 308/358 (86%), Gaps = 12/358 (3%)

Query: 1   MAANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMR 60
           MA+ +EV+SNKQVI K YV GFPKE+DM +  SS+ L+VEEGS ++LVKNLYLSCDPYMR
Sbjct: 21  MASEAEVVSNKQVIFKEYVSGFPKESDMYMTTSSVKLQVEEGSTSVLVKNLYLSCDPYMR 80

Query: 61  ARM--SFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQ 118
            RM  + + DP+FS   PGSP+ G GVAKVVDSGHP FKKGDLVWG+T WEEY+LI  P+
Sbjct: 81  GRMRNTPSDDPEFSPLHPGSPVFGLGVAKVVDSGHPGFKKGDLVWGSTRWEEYTLITAPE 140

Query: 119 GLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAK 178
           GLFKIHHTD+PLSYYTG+LGMPG+TA+ G  +IC PKKGE +YVSAASGAVGQLVGQFAK
Sbjct: 141 GLFKIHHTDIPLSYYTGLLGMPGITAYFGLNDICTPKKGERVYVSAASGAVGQLVGQFAK 200

Query: 179 LMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID 238
           LMGCYVVGSAGS+EKV          +LLKNKFGFD+AFNY+EE+D +AALKR FPEGID
Sbjct: 201 LMGCYVVGSAGSKEKV----------DLLKNKFGFDEAFNYREEHDWNAALKRYFPEGID 250

Query: 239 IYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVF 298
           IYFE+VGGKMLDAVLLNMR HGRIAACGMISQYNL  P+GVHNL+ VV+KRIR++GF+ F
Sbjct: 251 IYFENVGGKMLDAVLLNMRTHGRIAACGMISQYNLEHPDGVHNLIVVVHKRIRIQGFISF 310

Query: 299 DYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
           DYF QYS+FLD VLPYIREGK+ YVED+A+G+E+APAALVGLFSGRNVGKQ+V V+ E
Sbjct: 311 DYFGQYSKFLDFVLPYIREGKITYVEDIAEGIESAPAALVGLFSGRNVGKQVVAVAHE 368

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434189|ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147792339|emb|CAN61471.1| hypothetical protein VITISV_043825 [Vitis vinifera]

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 259/354 (73%), Positives = 301/354 (85%), Gaps = 10/354 (2%)

Query: 3   ANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRAR 62
           A+ E +SNKQVI ++YV GFPKE+DM V  S+ISLKV EGS A+LVKNLYLSCDPYMR+R
Sbjct: 2   ADGEAVSNKQVIFRDYVSGFPKESDMYVTTSTISLKVPEGSEAVLVKNLYLSCDPYMRSR 61

Query: 63  MSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFK 122
           M   Q      F PGSPI G+GVAKV+DS HP+F+ GDLVWG TGWEEYSLI   + LFK
Sbjct: 62  MRNIQGSYVEPFKPGSPITGYGVAKVLDSRHPDFRTGDLVWGITGWEEYSLITTDERLFK 121

Query: 123 IHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
           I HTDVPLSYYTGILGM GMTA++GFYEIC+PKKGEY+++SAASGAVGQLVGQFAKL+GC
Sbjct: 122 IQHTDVPLSYYTGILGMAGMTAYSGFYEICSPKKGEYVFISAASGAVGQLVGQFAKLLGC 181

Query: 183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
           YVVGSAG++EK          V+LLKNKFGFD+AFNYKEE DL+A LKR FPEGIDIYFE
Sbjct: 182 YVVGSAGTKEK----------VDLLKNKFGFDEAFNYKEEQDLEACLKRYFPEGIDIYFE 231

Query: 243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP 302
           +VGGKMLDAVL+NMRLHGRIA CGMISQYNL +PEGV NL  +V KRIRMEGF+VFDY+ 
Sbjct: 232 NVGGKMLDAVLVNMRLHGRIAVCGMISQYNLEEPEGVRNLFTIVTKRIRMEGFLVFDYYH 291

Query: 303 QYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
            Y +FLD ++PYIREGK+VYVED+A+GLE+AP AL+GL+SGRNVGKQ+VVV+RE
Sbjct: 292 LYPKFLDLIMPYIREGKIVYVEDIAEGLESAPTALIGLYSGRNVGKQVVVVARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092844|ref|XP_002309720.1| predicted protein [Populus trichocarpa] gi|222852623|gb|EEE90170.1| predicted protein [Populus trichocarpa]

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 267/362 (73%), Positives = 305/362 (84%), Gaps = 16/362 (4%)

Query: 1   MAANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKV---EEGSNAILVKNLYLSCDP 57
           MA++ E +SNKQVILK YV GFPKE+DM VK S   LK+   E  +NA+LVKNLYLSCDP
Sbjct: 1   MASSGEEVSNKQVILKGYVTGFPKESDMYVKTSPTKLKLPEDESSNNAVLVKNLYLSCDP 60

Query: 58  YMRARMSFN--QDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTT-GWEEYSLI 114
           YMR RM+     DPDFS FT  SPI+G GV+++VDS HP FKKGDLVWG   GWEEYSLI
Sbjct: 61  YMRGRMANRPVDDPDFSPFTLDSPIDGHGVSEIVDSRHPGFKKGDLVWGRKMGWEEYSLI 120

Query: 115 KNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVG 174
           K P+ LF+IH+TDVPLSYYTGILGMPGMTA+ GFY++C+PKKGE +Y+SAASGAVGQLVG
Sbjct: 121 KEPEKLFRIHNTDVPLSYYTGILGMPGMTAYFGFYQVCSPKKGERVYISAASGAVGQLVG 180

Query: 175 QFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP 234
           QFAKLMGCYVVGSAGS+EKV          ELLK+KFGFDDAFNYKEE+DL AALKR FP
Sbjct: 181 QFAKLMGCYVVGSAGSKEKV----------ELLKSKFGFDDAFNYKEEHDLVAALKRYFP 230

Query: 235 EGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEG 294
           EGIDIYFE+VGGKMLDAVLLNMR HGRIAACGMISQYNL QPEG+ NL  VV+KRIR+EG
Sbjct: 231 EGIDIYFENVGGKMLDAVLLNMRFHGRIAACGMISQYNLQQPEGLQNLTTVVFKRIRLEG 290

Query: 295 FVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS 354
           F++FDYF QY +FLD VLPYIREGK+VYVED+ +GLE+ P+ALVGLFSGRNVGKQ+V V+
Sbjct: 291 FIIFDYFDQYPKFLDFVLPYIREGKIVYVEDITEGLEHGPSALVGLFSGRNVGKQVVKVT 350

Query: 355 RE 356
            E
Sbjct: 351 NE 352

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577879|ref|XP_002529812.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530689|gb|EEF32561.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 263/362 (72%), Positives = 305/362 (84%), Gaps = 16/362 (4%)

Query: 1   MAANSEV---LSNKQVILKNYVEGFPKETDMLVKASSISLKV-EEGSNAILVKNLYLSCD 56
           MA+  EV   + NKQ+I K+YV GFPKETDM +  SSI+LKV +E S A+LVKNLYLSCD
Sbjct: 1   MASEGEVAVSVRNKQLIFKDYVSGFPKETDMFLATSSITLKVPQECSKAVLVKNLYLSCD 60

Query: 57  PYMRARMSF--NQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI 114
           PYMR RM+   + DP+F+SF+PGSPI+  GVAKVVDS HPEFK+G+LVWG+ GWEEY+LI
Sbjct: 61  PYMRGRMTIPPSDDPNFASFSPGSPIKSLGVAKVVDSAHPEFKEGELVWGSIGWEEYTLI 120

Query: 115 KNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVG 174
              +GLFKI HTD+PLSYYTG+LGMPGMTA+ GFY++C P KG+ +Y+SAASGAVGQLVG
Sbjct: 121 TATEGLFKIEHTDMPLSYYTGLLGMPGMTAYFGFYDVCFPNKGDRVYISAASGAVGQLVG 180

Query: 175 QFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP 234
           QFAKL GCYVVGSAGS+EKV          ELLKNKFG DDAFNYKE  D DAALKR FP
Sbjct: 181 QFAKLSGCYVVGSAGSKEKV----------ELLKNKFGLDDAFNYKEVPDWDAALKRYFP 230

Query: 235 EGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEG 294
           EGIDIYFE+VGGKMLDAVLLNMR+HGRIA CGMISQYNL +PEGVHNLM +VYKR+ ++G
Sbjct: 231 EGIDIYFENVGGKMLDAVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMTIVYKRVLIKG 290

Query: 295 FVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS 354
           FVV DYF QYS+FLD VLP IREGK+ YVED+A+GLE+APAALVGLFSGRNVGKQ+V V+
Sbjct: 291 FVVTDYFNQYSKFLDFVLPLIREGKITYVEDIAEGLESAPAALVGLFSGRNVGKQVVAVA 350

Query: 355 RE 356
           RE
Sbjct: 351 RE 352

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434197|ref|XP_002279529.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147783628|emb|CAN68149.1| hypothetical protein VITISV_035666 [Vitis vinifera]

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/354 (71%), Positives = 299/354 (84%), Gaps = 10/354 (2%)

Query: 3   ANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRAR 62
           A++E +SNKQVI ++YV GFPKE+DM +  S+ISLKV EGS A++VKNLYLSCDPYMR R
Sbjct: 2   ADAEEVSNKQVIFRDYVSGFPKESDMYMTTSTISLKVPEGSKAVVVKNLYLSCDPYMRPR 61

Query: 63  MSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFK 122
           MS+  D    SF PGS I G+GVAKV+DSGHP F KGDLVWG TGWEEY+LI  P+ LFK
Sbjct: 62  MSYTTDSYIHSFKPGSVISGYGVAKVLDSGHPNFSKGDLVWGFTGWEEYTLITAPESLFK 121

Query: 123 IHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
           I + DVPLSYY GILGMPG+TA+AGFYEIC+PKKGEY+YVSAASGAVGQLVGQFAKL+GC
Sbjct: 122 IPNNDVPLSYYIGILGMPGITAYAGFYEICSPKKGEYVYVSAASGAVGQLVGQFAKLIGC 181

Query: 183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
           YVVGSAGS+EK          V+LLKNKFGFD+AFNYKEE DL A LKR FPEGIDIYFE
Sbjct: 182 YVVGSAGSKEK----------VDLLKNKFGFDEAFNYKEEQDLVACLKRYFPEGIDIYFE 231

Query: 243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP 302
           +VGG MLDAVL NMR+ GRIAACGMISQYNL +P GV+NLMN++ K+I+M+GFV   YF 
Sbjct: 232 NVGGPMLDAVLANMRVQGRIAACGMISQYNLDKPVGVYNLMNIIKKQIKMQGFVAGSYFH 291

Query: 303 QYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
            Y +FL+ +LP+++EGKVVYVED+A+GLE+AP AL+GLFSGRNVGKQ+V+V+RE
Sbjct: 292 LYPKFLEMILPHVKEGKVVYVEDIAEGLESAPQALIGLFSGRNVGKQVVLVARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092846|ref|XP_002309721.1| predicted protein [Populus trichocarpa] gi|118487031|gb|ABK95346.1| unknown [Populus trichocarpa] gi|222852624|gb|EEE90171.1| predicted protein [Populus trichocarpa]

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 259/353 (73%), Positives = 295/353 (83%), Gaps = 14/353 (3%)

Query: 8   LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGS-NAILVKNLYLSCDPYMRARMSFN 66
           +SNKQV+LKNY  GFPKE+D  V  ++I LKV E S NA+L+K LYLSCDPY+R RM + 
Sbjct: 9   VSNKQVVLKNYACGFPKESDFEVTTTTIKLKVPEDSKNAVLLKTLYLSCDPYLRGRMRYT 68

Query: 67  --QDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT-TGWEEYSLIKNPQGLFKI 123
              DPDF S+T GSPI GF VA VVDSGHP+FKKGDLVWG   GWEEYSL+  P+ L KI
Sbjct: 69  PVTDPDFCSYTLGSPISGFAVATVVDSGHPDFKKGDLVWGRRVGWEEYSLVTTPECLTKI 128

Query: 124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
            H DVPLSYYTGILGMPG+TA+ GF+EIC+PKKGE +YVSAASGAVGQLVGQ AKLMGCY
Sbjct: 129 LHIDVPLSYYTGILGMPGITAYFGFFEICSPKKGESVYVSAASGAVGQLVGQIAKLMGCY 188

Query: 184 VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEH 243
           VVGSAGS+EKV          ELLK+KFGFD AFNYKEE+DLDAALKR FPEGIDIYFE+
Sbjct: 189 VVGSAGSKEKV----------ELLKSKFGFDGAFNYKEEHDLDAALKRYFPEGIDIYFEN 238

Query: 244 VGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQ 303
           VGGKMLDAVLLNMRL GRIAACGMISQYNL QPE + NL N+VYKRIR++GFVV DYF Q
Sbjct: 239 VGGKMLDAVLLNMRLRGRIAACGMISQYNLHQPETIQNLTNIVYKRIRIQGFVVMDYFDQ 298

Query: 304 YSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
           YS+FLD +LP IREGK+VYVED+A+GLE+ PAAL+GLFSGRN+GKQ+V V+ E
Sbjct: 299 YSKFLDFILPCIREGKIVYVEDIAEGLESGPAALIGLFSGRNIGKQVVKVTDE 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224813796|gb|ACN65116.1| 2-alkenal reductase [Artemisia annua]

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/357 (68%), Positives = 300/357 (84%), Gaps = 11/357 (3%)

Query: 1   MAANSEVLSNKQVILKNYVEGFPKETDMLVKAS-SISLKVEEGSNAILVKNLYLSCDPYM 59
           M    EV++NK+VILK+YV GFPKE+DM++K S +++LK+  GSN +LVKNLYLSCDPYM
Sbjct: 1   MEQQQEVITNKKVILKDYVVGFPKESDMILKTSETMTLKLPAGSNGLLVKNLYLSCDPYM 60

Query: 60  RARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQG 119
           R+RM+  +     SFTPGSP+ G+GVAKV++SGH  FKKGDL+WG TGWEEYS+I  P+G
Sbjct: 61  RSRMTKTEGSYVESFTPGSPLTGYGVAKVLESGHANFKKGDLIWGFTGWEEYSIINAPEG 120

Query: 120 LFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKL 179
           LFKI HTDVPLSYYTGILGMPGMTA+ GFYEIC PKKGEY++VSAASGAVGQLVGQFAKL
Sbjct: 121 LFKIEHTDVPLSYYTGILGMPGMTAYVGFYEICTPKKGEYVFVSAASGAVGQLVGQFAKL 180

Query: 180 MGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDI 239
            GCYVVGSAG++EK          V+LLKNKFGFD+AFNYKEE DLDAALKR FPEGIDI
Sbjct: 181 SGCYVVGSAGTKEK----------VDLLKNKFGFDEAFNYKEEQDLDAALKRYFPEGIDI 230

Query: 240 YFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFD 299
           YFE+VGG+MLDAVLLNMRL GRI+ CGMISQYNL Q EGV NL  +V KR+ M+GF+VFD
Sbjct: 231 YFENVGGRMLDAVLLNMRLDGRISVCGMISQYNLEQSEGVRNLFTLVTKRVTMKGFIVFD 290

Query: 300 YFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
           ++ +Y ++L+ ++P I+ G + Y+ED+ +GLENAPAAL+GL+SG+NVGKQ+VVV+ E
Sbjct: 291 HYHKYPKYLEMIIPLIKNGTINYIEDIVEGLENAPAALIGLYSGKNVGKQVVVVAHE 347

Source: Artemisia annua

Species: Artemisia annua

Genus: Artemisia

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434191|ref|XP_002279426.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|296084343|emb|CBI24731.3| unnamed protein product [Vitis vinifera]

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/349 (71%), Positives = 293/349 (83%), Gaps = 10/349 (2%)

Query: 8   LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ 67
           +SNKQVI K+Y+ GFP + DM +  S+ISLKV EGS A+LVKNLYLSCDPYMR RM++  
Sbjct: 4   VSNKQVIFKDYISGFPTDADMYITTSTISLKVPEGSKAVLVKNLYLSCDPYMRPRMTYTT 63

Query: 68  DPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTD 127
           D    SF PGS IEG+GVAKV+DSGHP F KGDLVWG T WEEYSLI + + L KI  TD
Sbjct: 64  DSYVDSFKPGSVIEGYGVAKVLDSGHPNFSKGDLVWGFTNWEEYSLITSTEMLIKIPTTD 123

Query: 128 VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS 187
           VPLSYYTGILGMPG+TA+AGFYEIC PKKGEY+YVSAASGAVGQLVGQFAKL+GCYVVGS
Sbjct: 124 VPLSYYTGILGMPGLTAYAGFYEICTPKKGEYVYVSAASGAVGQLVGQFAKLLGCYVVGS 183

Query: 188 AGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK 247
           AGS+EK          V+LLKNKFGFD+AFNYKEE DL A LKR FPEGIDIYF++VGGK
Sbjct: 184 AGSKEK----------VDLLKNKFGFDEAFNYKEETDLVACLKRYFPEGIDIYFDNVGGK 233

Query: 248 MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRF 307
           MLDAVLLNMR+HGRIAACGMISQYNL + EGV NL+N++ K++RM+GFV+  Y+  Y ++
Sbjct: 234 MLDAVLLNMRVHGRIAACGMISQYNLDKLEGVCNLINIIIKQVRMQGFVITSYYHLYPKY 293

Query: 308 LDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
           L+ VLP+I+EGK+VYVED  +GLE+AP AL+GLFSGRNVGKQ+VVV+RE
Sbjct: 294 LEMVLPHIKEGKIVYVEDTVEGLESAPQALIGLFSGRNVGKQVVVVARE 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444302246|pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302247|pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302248|pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302249|pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302250|pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum gi|444302251|pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 252/352 (71%), Positives = 298/352 (84%), Gaps = 10/352 (2%)

Query: 5   SEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS 64
           +E +SNKQVILKNYV G+PKE+DM +K  +I LKV EGSN ++VKNLYLSCDPYMR+RM 
Sbjct: 2   AEEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRMR 61

Query: 65  FNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIH 124
             +     SF PGSPI G+GVAKV++SG P+F+KGDLVWG TGWEEYS+I   Q LFKIH
Sbjct: 62  KIEGSYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIH 121

Query: 125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
             DVPLSYYTGILGMPGMTA+AGF+E+C+PKKGE ++VSAASGAVGQLVGQFAK++GCYV
Sbjct: 122 DKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYV 181

Query: 185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV 244
           VGSAGS+EK          V+LLK+KFGFD+AFNYKEE DL AALKR FP+GIDIYFE+V
Sbjct: 182 VGSAGSKEK----------VDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENV 231

Query: 245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
           GGKMLDAVL+NM+L+GRIA CGMISQYNL Q EGVHNL  ++ KRIRMEGF+VFDY+  Y
Sbjct: 232 GGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLY 291

Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
            ++L+ V+P I+ GKVVYVEDVA GLE+AP ALVGLFSGRN+GKQ+V+VSRE
Sbjct: 292 PKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6692816|dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum]

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 252/352 (71%), Positives = 298/352 (84%), Gaps = 10/352 (2%)

Query: 5   SEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS 64
           +E +SNKQVILKNYV G+PKE+DM +K  +I LKV EGSN ++VKNLYLSCDPYMR+RM 
Sbjct: 2   AEEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRMR 61

Query: 65  FNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIH 124
             +     SF PGSPI G+GVAKV++SG P+F+KGDLVWG TGWEEYS+I   Q LFKIH
Sbjct: 62  KIEGSYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIH 121

Query: 125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
             DVPLSYYTGILGMPGMTA+AGF+E+C+PKKGE ++VSAASGAVGQLVGQFAK++GCYV
Sbjct: 122 DKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYV 181

Query: 185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV 244
           VGSAGS+EK          V+LLK+KFGFD+AFNYKEE DL AALKR FP+GIDIYFE+V
Sbjct: 182 VGSAGSKEK----------VDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENV 231

Query: 245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
           GGKMLDAVL+NM+L+GRIA CGMISQYNL Q EGVHNL  ++ KRIRMEGF+VFDY+  Y
Sbjct: 232 GGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLY 291

Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
            ++L+ V+P I+ GKVVYVEDVA GLE+AP ALVGLFSGRN+GKQ+V+VSRE
Sbjct: 292 PKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	356
TAIR|locus:2097795	350	AT3G03080 [Arabidopsis thalian	0.963	0.98	0.698	2e-134
TAIR|locus:2148186	345	AT5G17000 [Arabidopsis thalian	0.946	0.976	0.688	2.7e-132
TAIR|locus:2148131	345	AER "alkenal reductase" [Arabi	0.946	0.976	0.685	5.6e-132
TAIR|locus:2148166	343	AT5G16990 [Arabidopsis thalian	0.946	0.982	0.684	3.1e-131
TAIR|locus:2148116	346	AT5G16960 [Arabidopsis thalian	0.938	0.965	0.702	4.5e-130
TAIR|locus:2153759	353	AT5G37980 [Arabidopsis thalian	0.946	0.954	0.669	1.9e-129
TAIR|locus:2028736	351	AT1G26320 [Arabidopsis thalian	0.963	0.977	0.668	6.6e-129
TAIR|locus:2153799	353	AT5G37940 [Arabidopsis thalian	0.946	0.954	0.661	1.6e-127
TAIR|locus:2154041	353	AT5G38000 [Arabidopsis thalian	0.943	0.951	0.660	2.9e-126
UNIPROTKB|Q6WAU0	342	Q6WAU0 "(+)-pulegone reductase	0.955	0.994	0.630	3.6e-121

TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)]

 Score = 1317 (468.7 bits), Expect = 2.0e-134, P = 2.0e-134
 Identities = 250/358 (69%), Positives = 294/358 (82%)

Query:     3 ANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRAR 62
             + +  ++NKQVIL++YV GFPKE+D++   S+I LK+ EGS  +LVKNLYLSCDPYMR R
Sbjct:     4 SGNATVANKQVILRDYVTGFPKESDLIFTDSTIDLKIPEGSKTVLVKNLYLSCDPYMRIR 63

Query:    63 MSFNQDPDFSS----FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQ 118
             M    DP  ++    + PG PI GF V+KV+DSGHP++KKGDL+WG  GW EYSLI    
Sbjct:    64 MG-KPDPGTAALAPHYIPGEPIYGFSVSKVIDSGHPDYKKGDLLWGLVGWGEYSLITPDF 122

Query:   119 GLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAK 178
               +KI HTDVPLSYYTG+LGMPGMTA+AGFYEIC+PKKGE ++VSAASGAVGQLVGQFAK
Sbjct:   123 SHYKIQHTDVPLSYYTGLLGMPGMTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAK 182

Query:   179 LMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID 238
             +MGCYVVGSAGS EKV          +LLKNKFGFDDAFNYK E DL+AALKRCFPEGID
Sbjct:   183 IMGCYVVGSAGSNEKV----------DLLKNKFGFDDAFNYKAEPDLNAALKRCFPEGID 232

Query:   239 IYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVF 298
             IYFE+VGGKMLDAVLLNM+LHGRIA CGMISQYNL   EGVHNL NV+YKRIR++GFVV 
Sbjct:   233 IYFENVGGKMLDAVLLNMKLHGRIAVCGMISQYNLEDQEGVHNLANVIYKRIRIKGFVVS 292

Query:   299 DYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
             DYF ++ +FLD VLPYIREGK+ YVEDV +GLEN P+AL+GLF G+NVGKQL+ V+RE
Sbjct:   293 DYFDKHLKFLDFVLPYIREGKITYVEDVVEGLENGPSALLGLFHGKNVGKQLIAVARE 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1297 (461.6 bits), Expect = 2.7e-132, P = 2.7e-132
 Identities = 243/353 (68%), Positives = 290/353 (82%)

Query:     9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
             +NKQV+LKNYV GFPKE+D   K +++  K+  GSN++LVKNLYLSCDPYMR RM    D
Sbjct:     4 TNKQVVLKNYVSGFPKESDFDFKTTTVEFKLPGGSNSVLVKNLYLSCDPYMRIRMG-KPD 62

Query:    69 PDFSS----FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGL-FKI 123
             P  ++    + PG PI G+GV++V++SGHP++KKGDL+WG  GWEEYS+I     + FKI
Sbjct:    63 PSTAALAQAYAPGKPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMTHMHFKI 122

Query:   124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
              HTD+PLSYYTG+LGMPGMTA+AGFYE+C+PK+GE +YVSAASGAVGQLVGQFAK+MGCY
Sbjct:   123 QHTDIPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMGCY 182

Query:   184 VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEH 243
             VVGSAGS EKV          +LLK KFGFDDAFNYKEE DL AALKRCFP GIDIYFE+
Sbjct:   183 VVGSAGSTEKV----------DLLKTKFGFDDAFNYKEEPDLSAALKRCFPTGIDIYFEN 232

Query:   244 VGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQ 303
             VGGKMLDAVLLNM  HGRIA CGMISQYNL   EGVHNL N++YKRIR++GF VFD++ +
Sbjct:   233 VGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFAVFDFYEK 292

Query:   304 YSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
             YS+FLD VLP+I+EGK+ YVEDVADGLE  P ALVGLF G+NVGKQ+VV++RE
Sbjct:   293 YSKFLDFVLPHIKEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVVVIARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
 Identities = 242/353 (68%), Positives = 293/353 (83%)

Query:     9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
             +NKQVILK+YV GFP E+D     +++ L+V EG+N++LVKNLYLSCDPYMR RM    D
Sbjct:     4 TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMG-KPD 62

Query:    69 PDFSS----FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKN-PQGLFKI 123
             P  ++    +TPG PI+G+GV+++++SGHP++KKGDL+WG   WEEYS+I       FKI
Sbjct:    63 PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI 122

Query:   124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
              HTDVPLSYYTG+LGMPGMTA+AGFYE+C+PK+GE +YVSAASGAVGQLVGQ AK+MGCY
Sbjct:   123 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY 182

Query:   184 VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEH 243
             VVGSAGS+EKV          +LLK KFGFDDAFNYKEE+DL AALKRCFP GIDIYFE+
Sbjct:   183 VVGSAGSKEKV----------DLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFEN 232

Query:   244 VGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQ 303
             VGGKMLDAVL+NM +HGRIA CGMISQYNL   EGVHNL N++YKRIR++GFVV D++ +
Sbjct:   233 VGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDK 292

Query:   304 YSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
             YS+FL+ VLP+IREGK+ YVEDVADGLE AP ALVGLF G+NVGKQ+VVV+RE
Sbjct:   293 YSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP;IMP

GO:0032440 "2-alkenal reductase [NAD(P)

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)]

 Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
 Identities = 241/352 (68%), Positives = 292/352 (82%)

Query:     9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
             +NKQVI K++V GFPKE+D     +++ L+V EGS ++LVKNLYLSCDPYMR+RM    D
Sbjct:     3 TNKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKSVLVKNLYLSCDPYMRSRMG-KPD 61

Query:    69 PDFS---SFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGL-FKIH 124
             P  +   ++ PG PI G+GV++V++SGHP++KKGDL+WG  GWEEYS+I     + FKI 
Sbjct:    62 PSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQ 121

Query:   125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
             HTDVPLSYYTG+LGMPGMTA+AGFYE+C+PKKGE +YVSAASGAVGQLVGQFAK+MGCYV
Sbjct:   122 HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYV 181

Query:   185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV 244
             VGSAGS+EKV          +LLK KFGFDDAFNYKEE+DL AALKRCFP+GID+YFE+V
Sbjct:   182 VGSAGSKEKV----------DLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENV 231

Query:   245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
             GGKMLDAVLLNM  HGRIA CGMISQYNL   EGVHNL N++YKRIR++GFVV D++ +Y
Sbjct:   232 GGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKY 291

Query:   305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
              +FL+ VLP I+EGK+ YVEDVADGLE AP ALVGLF G+NVGKQ+VV++RE
Sbjct:   292 PKFLELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)]

 Score = 1276 (454.2 bits), Expect = 4.5e-130, P = 4.5e-130
 Identities = 246/350 (70%), Positives = 288/350 (82%)

Query:    10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP 69
             NKQV+L +YV GF KE+D+++ +++I L+V +GS   LVKNLYLSCDPYMR RM    DP
Sbjct:     6 NKQVVLLDYVTGFAKESDLVITSTTIDLRVLKGSMTALVKNLYLSCDPYMRNRMR-KPDP 64

Query:    70 ----DFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGL-FKIH 124
                    SFTPG PI GFGV+KV+DSGH ++++GDL+WG  GWEEYS+I     L FKIH
Sbjct:    65 LSPATAQSFTPGKPISGFGVSKVIDSGHSDYEEGDLIWGAVGWEEYSVITPIPNLHFKIH 124

Query:   125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
             HT+ PLSYYTG+LGMPGMTA+ GFYEIC PKKG+ ++VSAASGAVGQLVGQFAKLMGCYV
Sbjct:   125 HTNFPLSYYTGLLGMPGMTAYVGFYEICTPKKGDTVFVSAASGAVGQLVGQFAKLMGCYV 184

Query:   185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV 244
             VGSAGS+EKV          +LLKNKFGFDDAFNYKEE++L  ALKRCFPEGIDIYFE+V
Sbjct:   185 VGSAGSKEKV----------DLLKNKFGFDDAFNYKEEHNLIGALKRCFPEGIDIYFENV 234

Query:   245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
             GGKMLDAV+LNMR HGRIAACGMISQYNL  PEG++ L  + YKRIR+EGF  FDYF +Y
Sbjct:   235 GGKMLDAVILNMRPHGRIAACGMISQYNLKNPEGIYGLSLITYKRIRIEGFNCFDYFHKY 294

Query:   305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS 354
             S FL+ V+PYI+EGK+ YVEDVADGLE+APAALVGLF G+NVGKQLVVVS
Sbjct:   295 SEFLEFVVPYIKEGKIKYVEDVADGLESAPAALVGLFHGKNVGKQLVVVS 344

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)]

 Score = 1270 (452.1 bits), Expect = 1.9e-129, P = 1.9e-129
 Identities = 237/354 (66%), Positives = 287/354 (81%)

Query:     9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
             +N QVIL+NYV GFPKE+D+ + A+++ L+V  GS A+LVKNLYLSCDP+ R RM    D
Sbjct:    11 TNNQVILRNYVSGFPKESDLYIAATTVDLRVPPGSMAVLVKNLYLSCDPFSRIRME-KPD 69

Query:    69 PDFSS-----FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIK-NPQGLFK 122
             P   +     ++ G PI GFGVAK +DS HP +K GDL+WG  GWEEYS+I   P   FK
Sbjct:    70 PSSPASVARAYSIGKPISGFGVAKAIDSCHPNYKTGDLLWGRVGWEEYSVITPTPSSHFK 129

Query:   123 IHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
             IHHTDVPLS+YTG+LG+PG+TA+ GFYEIC+PKKGE ++VSAASGAVGQLVGQFAK+ GC
Sbjct:   130 IHHTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGC 189

Query:   183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
             YVVGSA S+EKV          +LLK KFG+D+AFNYKEE+DL AALKRCFPEGIDIYFE
Sbjct:   190 YVVGSASSKEKV----------DLLKTKFGYDEAFNYKEEHDLSAALKRCFPEGIDIYFE 239

Query:   243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP 302
             +VGGKMLDAVL NMR HGRIAACGMISQYNL +PEGVHNL ++VYKRIR++GF   ++F 
Sbjct:   240 NVGGKMLDAVLENMRTHGRIAACGMISQYNLKEPEGVHNLASIVYKRIRVQGFAAVEFFD 299

Query:   303 QYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
             +YS+FLD +LPY+REGK+ YVED+A GLEN P+AL+GLF G+NVGKQLV V+RE
Sbjct:   300 KYSKFLDFILPYVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVAVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)]

 Score = 1265 (450.4 bits), Expect = 6.6e-129, P = 6.6e-129
 Identities = 240/359 (66%), Positives = 289/359 (80%)

Query:     3 ANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRAR 62
             A +  ++NKQ+I  +YV GFPKE+D+ +  ++I L++ EGS ++LVKNLYLSCDPYMR  
Sbjct:     4 AEAVTVTNKQIIFPDYVTGFPKESDLKITTTTIDLRLPEGSTSVLVKNLYLSCDPYMRIC 63

Query:    63 MSFNQDPDFSSFTP----GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIK-NP 117
             M    DP  SS  P    G PI G GV+KV+DSGHP++KKGDL+WG  GWEEYS+I    
Sbjct:    64 MG-KPDPLSSSLVPPYKTGVPIIGLGVSKVIDSGHPDYKKGDLLWGLVGWEEYSVITLTT 122

Query:   118 QGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFA 177
                FKI HTDVPLSYYTG+LGMPGMTA+AGFYE+C+PKKGE ++VSAASGAVGQLVGQFA
Sbjct:   123 YSHFKIEHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVFVSAASGAVGQLVGQFA 182

Query:   178 KLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI 237
             KLMGCYVVGSAGS+EKV+L          LK KFGFDDAFNYKEE D  AALKR FPEGI
Sbjct:   183 KLMGCYVVGSAGSKEKVYL----------LKTKFGFDDAFNYKEEKDFSAALKRYFPEGI 232

Query:   238 DIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV 297
             DIYFE+VGGKMLDAVL+NM+LHGR+A CGMISQYNL  PEGVHNL  ++YKRI+++GF V
Sbjct:   233 DIYFENVGGKMLDAVLINMKLHGRVAVCGMISQYNLVDPEGVHNLPTILYKRIQLQGFGV 292

Query:   298 FDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
              D++ +Y +FLD VLPYIREGK+ YVED+A+G E+ P+AL+GLF G+NVGKQL VV+RE
Sbjct:   293 CDFYDKYPKFLDFVLPYIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQLFVVARE 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)]

 Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
 Identities = 234/354 (66%), Positives = 283/354 (79%)

Query:     9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
             +N QVIL++YV GFPK++D+ +  ++I L+V  GS A+LVKNLYLSCDP+ R RM    D
Sbjct:    11 TNNQVILRDYVSGFPKQSDLYIATTTIDLRVPPGSMAVLVKNLYLSCDPHSRTRMG-KPD 69

Query:    69 PDFSS-----FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIK-NPQGLFK 122
             P   +     FT G PI GFGVAK +DSGHP +K GDL+WG  GWEEYS+I   P   FK
Sbjct:    70 PSSQASMAHAFTIGKPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFK 129

Query:   123 IHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
             IHHTDVPLS+YTG+LG+PG+TA+ GFYEIC+PKKGE ++VSAASGAVGQLVGQFAK+ GC
Sbjct:   130 IHHTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGC 189

Query:   183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
             YVVGSA S+EKV          +LLK KFG+DDAFNYKEE DL AALKRCFPEGIDIYFE
Sbjct:   190 YVVGSASSKEKV----------DLLKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFE 239

Query:   243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP 302
             +VGGKMLDAVL NMR HGRIAACGMISQYNL +PEG+HN   +V+KRIR++ F   ++F 
Sbjct:   240 NVGGKMLDAVLQNMRTHGRIAACGMISQYNLKEPEGLHNTATIVHKRIRVQDFAAVEFFD 299

Query:   303 QYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
             +YS+FLD +LP++REGK+ YVED+A GLEN P+AL+GLF G+NVGKQLV V+RE
Sbjct:   300 RYSKFLDFILPHVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVEVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1240 (441.6 bits), Expect = 2.9e-126, P = 2.9e-126
 Identities = 233/353 (66%), Positives = 281/353 (79%)

Query:     9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
             +N QVI +NYV GFPKE+D+ + AS++ L+V  GS A+LVKNLYLSCDP+ R RM    D
Sbjct:    11 TNNQVIFRNYVNGFPKESDLYIAASTVDLRVPPGSMAVLVKNLYLSCDPHSRTRMG-KPD 69

Query:    69 PDFSS-----FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIK-NPQGLFK 122
             P   +     FT G PI GFGVAK +DSGHP +K GDL+WG  GWEEYS+I   P   FK
Sbjct:    70 PSSPASMAHAFTIGKPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFK 129

Query:   123 IHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
             IHHTDVPLS+YTG+LG+PG+TA+ GFYEIC+PKKGE ++VSAASGAVGQLVGQFAK+ GC
Sbjct:   130 IHHTDVPLSFYTGLLGIPGLTAYIGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGC 189

Query:   183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
             YVVGSA S EKV          +LLK KFG+DDAFNYKEE DL AALKRCFPEGIDIYFE
Sbjct:   190 YVVGSASSEEKV----------DLLKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFE 239

Query:   243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP 302
             +VGGKML+AVL NMR HGRIAACGMISQYNL +PE +HN   +V+KRIR++GF   ++F 
Sbjct:   240 NVGGKMLEAVLENMRTHGRIAACGMISQYNLKKPEVLHNTATIVHKRIRVQGFAAVEFFD 299

Query:   303 QYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR 355
             +YS+FLD +LP++REGK+ YVED++ GLEN P+AL+GLF G+NVGKQLV V+R
Sbjct:   300 RYSKFLDFILPHVREGKLTYVEDISQGLENGPSALIGLFHGKNVGKQLVEVAR 352

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)]

 Score = 1192 (424.7 bits), Expect = 3.6e-121, P = 3.6e-121
 Identities = 222/352 (63%), Positives = 286/352 (81%)

Query:     7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSN-AILVKNLYLSCDPYMRARMSF 65
             ++ NKQ++L NY+ G  K++D+ ++ S+I +++ +G N AILVKNLYLS +PY+  RM  
Sbjct:     1 MVMNKQIVLNNYINGSLKQSDLALRTSTICMEIPDGCNGAILVKNLYLSVNPYLILRMGK 60

Query:    66 NQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT-TGWEEYSLIKNPQGLFKIH 124
                P F S  PGS I  +GV+KV+DS HP ++KG+L+WG+  GWEEY+LI+NP  LFKI 
Sbjct:    61 LDIPQFDSILPGSTIVSYGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQ 120

Query:   125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
               DVPLSYY GILGMPGMTA+AGF+EIC+PKKGE ++V+AA+G+VGQLVGQFAK+ GCYV
Sbjct:   121 DKDVPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYV 180

Query:   185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV 244
             VGSAGS+EKV          +LLKNKFGFDDAFNYKEE+D D ALKR FPEGIDIYF++V
Sbjct:   181 VGSAGSKEKV----------DLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNV 230

Query:   245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
             GGKML+AV+ NMR+HGRIA CGM+SQY+L QPEGVHNL+ ++ K+IRM+GFVV DY+  Y
Sbjct:   231 GGKMLEAVINNMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLY 290

Query:   305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
              +FL+ VLP I+EGKV YVED+++GLE+AP+AL+G++ GRNVG Q+V VSRE
Sbjct:   291 PKFLEMVLPRIKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052579 "(+)-pulegone reductase, (+)-isomenthone as substrate, activity" evidence=IDA

GO:0052580 "(+)-pulegone reductase, (-)-menthone as substrate, activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q28719	PTGR1_RABIT	1, ., 3, ., 1, ., 7, 4	0.3877	0.8848	0.9025	yes	no
Q3SZJ4	PTGR1_BOVIN	1, ., 3, ., 1, ., 7, 4	0.3948	0.8904	0.9635	yes	no
Q6WAU0	PULR_MENPI	1, ., 3, ., 1, ., 8, 1	0.6361	0.9466	0.9853	N/A	no
Q9C0Y6	YKM8_SCHPO	1, ., -, ., -, ., -	0.4328	0.9382	0.9570	yes	no
Q9EQZ5	PTGR1_CAVPO	1, ., 3, ., 1, ., 7, 4	0.3879	0.8932	0.9665	yes	no
O34812	YFMJ_BACSU	1, ., -, ., -, ., -	0.3874	0.9213	0.9675	yes	no
P97584	PTGR1_RAT	1, ., 3, ., 1, ., 7, 4	0.3832	0.8904	0.9635	yes	no
Q14914	PTGR1_HUMAN	1, ., 3, ., 1, ., 7, 4	0.3771	0.9044	0.9787	yes	no
Q29073	PTGR1_PIG	1, ., 3, ., 1, ., 7, 4	0.3815	0.8932	0.9665	yes	no
Q91YR9	PTGR1_MOUSE	1, ., 3, ., 1, ., 7, 4	0.3960	0.9016	0.9756	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00034730001 SubName- Full=Putative uncharacterized protein (Chromosome chr5 scaffold_72, whole genome shotgun sequence); (345 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	356
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	0.0
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	1e-179
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	1e-156
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	1e-121
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	1e-112
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	2e-75
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	2e-69
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-37
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	4e-27
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	8e-24
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	6e-21
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-19
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	1e-18
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-18
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-17
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	7e-16
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	3e-15
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	4e-15
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	8e-15
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	3e-14
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	4e-14
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	1e-12
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	7e-12
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	2e-11
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	2e-11
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-10
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	2e-10
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	3e-10
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	6e-10
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	3e-09
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	9e-09
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	8e-08
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	2e-07
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	4e-07
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	2e-06
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-05
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-05
smart00829	287	smart00829, PKS_ER, Enoylreductase	2e-05
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-05
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	4e-05
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	7e-05
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	3e-04
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	4e-04
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	5e-04
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	6e-04
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	7e-04
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	0.002
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	0.002
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	0.003
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	0.004
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	0.004

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score =  601 bits (1551), Expect = 0.0
 Identities = 238/347 (68%), Positives = 277/347 (79%), Gaps = 12/347 (3%)

Query: 9   SNKQVILKNYVEGFPKETDMLVKASSISLKVEE-GSNAILVKNLYLSCDPYMRARMSFNQ 67
            NKQVILK YV GFPKE+D+ ++ + ++LKV   GS  +LVKNLYLSCDPYMR RM  + 
Sbjct: 2   RNKQVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHD 61

Query: 68  DPD-FSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHT 126
           D      F PG  I G+GVAKVVDSG+P+FK GDLVWG TGWEEYSLI   Q L KI HT
Sbjct: 62  DSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDHT 121

Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
           DVPLSYY G+LGMPG+TA+AGFYE+C PKKGE ++VSAASGAVGQLVGQ AKL GCYVVG
Sbjct: 122 DVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVG 181

Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
           SAGS EKV          +LLKNK GFDDAFNYKEE DLDAALKR FP GIDIYF++VGG
Sbjct: 182 SAGSDEKV----------DLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGG 231

Query: 247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSR 306
           KMLDAVLLNM LHGRIAACGMISQYNL  PEGV NL+N++YKR++++GF+V DY  +Y  
Sbjct: 232 KMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPE 291

Query: 307 FLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
           FL+ +  YI+EGK+ YVED+ADGLE+AP A VGLF+G N+GKQ+V V
Sbjct: 292 FLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score =  500 bits (1289), Expect = e-179
 Identities = 225/354 (63%), Positives = 274/354 (77%), Gaps = 13/354 (3%)

Query: 6   EVLSNKQVILKNYVEGFPKETDMLVK-ASSISLKVEEGSNAILVKNLYLSCDPYMRARMS 64
           +V+ NKQVILKNY++G PKETDM VK  + I LK  +GS A LVKNLYLSCDPYMR RM 
Sbjct: 5   QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMR 64

Query: 65  FNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI-KNPQGLFKI 123
              D     F PG  IEGFGV+KVVDS  P FK GDL+ G TGWEEYSLI  +   L KI
Sbjct: 65  DFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKI 124

Query: 124 -HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
               D+PLSY+ G+LGM G TA+AGFYE+C+PKKG+ ++VSAASGAVGQLVGQ AKL GC
Sbjct: 125 QLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC 184

Query: 183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
           YVVGSAGS +KV          +LLKNK GFD+AFNYKEE DLDAALKR FPEGIDIYF+
Sbjct: 185 YVVGSAGSSQKV----------DLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFD 234

Query: 243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP 302
           +VGG MLDA LLNM++HGRIA CGM+S  +LS  +G+HNL N++ KRIRM+GF+  DY  
Sbjct: 235 NVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLH 294

Query: 303 QYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
            + +FL+ V  Y ++GK+VY+ED+++GLE+APAALVGLFSG+NVGKQ++ V++E
Sbjct: 295 LFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348

Length = 348

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  442 bits (1139), Expect = e-156
 Identities = 160/344 (46%), Positives = 211/344 (61%), Gaps = 16/344 (4%)

Query: 9   SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
           SN+QV+L    EG P   D  +    +    E     +LV+ LYLS DPYMR  MS +  
Sbjct: 1   SNRQVVLAKRPEGPPPPDDFELVEVPLP---ELKDGEVLVRTLYLSVDPYMRGWMS-DAK 56

Query: 69  PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTD- 127
                   G P+ G GV +VV+S  P+FK GDLV G  GW+EY+++    GL K+  +  
Sbjct: 57  SYSPPVQLGEPMRGGGVGEVVESRSPDFKVGDLVSGFLGWQEYAVVDGASGLRKLDPSLG 116

Query: 128 VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS 187
           +PLS Y G+LGM G+TA+ G  EI  PK GE + VSAA+GAVG +VGQ AKL+G  VVG 
Sbjct: 117 LPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGI 176

Query: 188 AGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK 247
           AGS EK             L  + GFD A NYK   DL  ALK   P+GID+YF++VGG+
Sbjct: 177 AGSDEKC----------RWLVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGE 225

Query: 248 MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRF 307
           +LDA L  +   GRIA CG ISQYN ++P G  NL N++ KR+ M+GF+V DY  ++   
Sbjct: 226 ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEA 285

Query: 308 LDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
           L  +  ++ EGK+ Y EDV +GLENAP A +GLF+G+N GK +V
Sbjct: 286 LAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  352 bits (905), Expect = e-121
 Identities = 154/350 (44%), Positives = 208/350 (59%), Gaps = 22/350 (6%)

Query: 9   SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
            N++++L +  EG P   D  ++   +    E G   +L++ LYLS DPYMR RMS   D
Sbjct: 8   VNRRIVLASRPEGAPVPDDFRLEEVDVP---EPGEGQVLLRTLYLSLDPYMRGRMS---D 61

Query: 69  PD--FSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHT 126
                     G  + G  VAKVV S HP F+ GD+V G +GW+EY++    +GL K+  +
Sbjct: 62  APSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISD-GEGLRKLDPS 120

Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
             PLS Y G+LGMPG+TA+ G  +I  PK GE + VSAA+GAVG +VGQ AKL GC VVG
Sbjct: 121 PAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVG 180

Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
            AG  EK           + L  + GFD   +YK E D   ALK   P+GID+YFE+VGG
Sbjct: 181 IAGGAEK----------CDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGG 229

Query: 247 KMLDAVLLNMRLHGRIAACGMISQYN-LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY- 304
           ++LDAVL  + L  RI  CG ISQYN    P G   L  ++ KR+R++GF+V   + Q  
Sbjct: 230 EVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRF 289

Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS 354
              L  +  +++EGK+ Y E + DGLENAP A +GL SG+N GK +V V+
Sbjct: 290 PEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVA 339

Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score =  330 bits (849), Expect = e-112
 Identities = 139/352 (39%), Positives = 200/352 (56%), Gaps = 33/352 (9%)

Query: 10  NKQVILKNYVEGFPKETDMLVKASSI-SLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
            K  +LK + +G PKE+D  +    +  LK  E    +L + L+LS DPYMR        
Sbjct: 3   AKTWVLKKHFDGKPKESDFELVEEELPPLKDGE----VLCEALFLSVDPYMRPYSKR--- 55

Query: 69  PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI--KNPQGLFKI--- 123
                   G  + G  VAKV++S + +F  G +V  + GW  +++   K+   L+K+   
Sbjct: 56  -----LNEGDTMIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYKLPAD 110

Query: 124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
              D+P S   G+LGMPG+TA+ G  EIC PK GE + V+ A+GAVG LVGQ AK+ GC 
Sbjct: 111 LPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCK 170

Query: 184 VVGSAGSREKV-WLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
           V+G AGS +KV W       L EL     GFD  FNYK    L+ ALK   P+GID YF+
Sbjct: 171 VIGCAGSDDKVAW-------LKEL-----GFDAVFNYKTV-SLEEALKEAAPDGIDCYFD 217

Query: 243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNL-MNVVYKRIRMEGFVVFDYF 301
           +VGG+    VL +M   GR+A CG IS YN  +P+    +   +++K+++MEGF+V+ + 
Sbjct: 218 NVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQ 277

Query: 302 PQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
            ++   L  +L +I+EGK+ Y E V +G EN P A +G+  G N GK +V V
Sbjct: 278 DRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score =  235 bits (600), Expect = 2e-75
 Identities = 139/348 (39%), Positives = 195/348 (56%), Gaps = 32/348 (9%)

Query: 11  KQVILKNYVEGFPKETDMLVKASSIS-LKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP 69
           K   LK +  G+P ++D  +K   +  L   E    +L++ L+LS DPYMR         
Sbjct: 2   KTWTLKKHFVGYPTDSDFELKTVELPPLNNGE----VLLEALFLSVDPYMRVAAK----- 52

Query: 70  DFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHT--- 126
                  G  + G  VA+VV+S +    KG +V  + GW  +S I + + L K+      
Sbjct: 53  ---RLKEGDTMMGQQVARVVESKNVALPKGTIVLASPGWTSHS-ISDGKDLEKLLTEWPD 108

Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
            +PLS   G +GMPG+TA+ G  EIC  K GE + V+AA+GAVG +VGQ AKL GC VVG
Sbjct: 109 TLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVG 168

Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
           +AGS EK          V  LK K GFD AFNYK    L+  LK+  P+G D YF++VGG
Sbjct: 169 AAGSDEK----------VAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGG 217

Query: 247 KMLDAVLLNMRLHGRIAACGMISQYNLSQ--PEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
           +  + V+  M+  GRIA CG IS YN +   P G    + V+Y+ +RMEGF+V  +  + 
Sbjct: 218 EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEI-VIYQELRMEGFIVNRWQGEV 276

Query: 305 -SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
             + L  +L ++ EGK+ Y E V +G EN PAA +G+  G N+GK +V
Sbjct: 277 RQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIV 324

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score =  220 bits (563), Expect = 2e-69
 Identities = 127/362 (35%), Positives = 195/362 (53%), Gaps = 37/362 (10%)

Query: 10  NKQVILKNY--VEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ 67
           NK+V+L +     G P   +  V+  ++  ++ EG   +LV+ LYLS DPYMR RM+ + 
Sbjct: 3   NKRVVLNSRPGKNGNPVAENFRVEECTLPDELNEGQ--VLVRTLYLSVDPYMRCRMNEDT 60

Query: 68  DPDF-SSFTPGSPIEGFGVAKVVDSGHPEFKKGDLV----WGTTGWEEYSLIKNPQGLFK 122
             D+ + +     ++G GV  V +S H +F  GD+V    W    W+ Y+++ +   L K
Sbjct: 61  GTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFNWP---WQTYAVL-DGSSLEK 116

Query: 123 IHHT--DVPLSYYTGILGMPGMTAWAGFYE--ICAPKKGEYIYVSAASGAVGQLVGQFAK 178
           +     D  LSY+ G +G+PG+TA  G  E     P   + + VS A+GA G L GQ  +
Sbjct: 117 VDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGR 176

Query: 179 LMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI 237
           L+GC  VVG  GS EK           +LLK++ GFD A NYK +N  +  L+   PEG+
Sbjct: 177 LLGCSRVVGICGSDEKC----------QLLKSELGFDAAINYKTDNVAER-LRELCPEGV 225

Query: 238 DIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNL------SQPEGVHNLMNVVYKRIR 291
           D+YF++VGG++ D V+  M  +  I  CG ISQYN         PE    +  +  + I 
Sbjct: 226 DVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAI--LKERNIT 283

Query: 292 MEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
            E F+V +Y  ++   +  +  +++EGK+   E V +GLENA  A   + +G N+GKQ+V
Sbjct: 284 RERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIV 343

Query: 352 VV 353
            V
Sbjct: 344 KV 345

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  137 bits (346), Expect = 1e-37
 Identities = 93/285 (32%), Positives = 133/285 (46%), Gaps = 35/285 (12%)

Query: 81  EGFGVAKVVDSGHPEFKKGDLVWGTT--GWEEYSLIKNPQGLFKIHHTDVPL---SYYTG 135
           EG G    V  G  +FK GD V   +   + EY ++         H   VP         
Sbjct: 67  EGVGEVVAVGEGVTDFKVGDAVATMSFGAFAEYQVVP------ARHAVPVPELKPEVLPL 120

Query: 136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW 195
           ++   G+TA     E+   K GE + V+AA+G  GQ   Q AKL GC+V+G+  S EK  
Sbjct: 121 LVS--GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKA- 177

Query: 196 LIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLN 255
                    E LK+  G D   NYK E DL   LK+ +P+G+D+ +E VGG+M D  + N
Sbjct: 178 ---------EFLKS-LGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDN 226

Query: 256 MRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRME-----GFVVFDYFPQYSRFLDA 310
           + L GR+   G IS Y  S           +  ++  +     GF +  Y     + LD 
Sbjct: 227 LALKGRLIVIGFISGY-QSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDR 285

Query: 311 VLPYIREGKVVYVEDVAD--GLENAPAALVGLFSGRNVGKQLVVV 353
           +L   + GK+V   D     GLE+   A+  L+SG+N+GK  VVV
Sbjct: 286 LLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGK--VVV 328

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  108 bits (272), Expect = 4e-27
 Identities = 85/294 (28%), Positives = 123/294 (41%), Gaps = 40/294 (13%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTT------GWEEYSLIKN------PQGLF 121
           F PGS  E  GV   V SG   FK GD V          G+ EY ++        P GL 
Sbjct: 59  FIPGS--EAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGL- 115

Query: 122 KIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMG 181
               +          L + G+TAW   ++    K GE + V  A+G VG    Q AK +G
Sbjct: 116 ----SFE----EAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALG 167

Query: 182 CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYF 241
             VV    S EK          +ELLK + G D   NY+EE+ ++   +    +G+D+  
Sbjct: 168 ATVVAVVSSSEK----------LELLK-ELGADHVINYREEDFVEQVRELTGGKGVDVVL 216

Query: 242 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEG-FVVFDY 300
           + VGG    A L  +   GR+ + G +S      P    NL+ ++ KR+ + G  +    
Sbjct: 217 DTVGGDTFAASLAALAPGGRLVSIGALS----GGPPVPLNLLPLLGKRLTLRGVTLGSRD 272

Query: 301 FPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFS-GRNVGKQLVVV 353
               +  L  +   +  GK+  V D    L  APAA   L    R  GK ++ V
Sbjct: 273 PEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 99.6 bits (249), Expect = 8e-24
 Identities = 80/294 (27%), Positives = 120/294 (40%), Gaps = 41/294 (13%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT-TGWE-------EYSLIKNPQGLFKIHH 125
           + PGS  +G GV + V  G    K GD VW T  GW        EY ++           
Sbjct: 59  YVPGS--DGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVP--------AD 108

Query: 126 TDVPL----SYYTGI-LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM 180
             VPL    S+  G  LG+P +TA+   +     K GE + V   SGAVG    Q A+  
Sbjct: 109 QLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWA 168

Query: 181 GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIY 240
           G  V+ +A S E        ++LV       G D  FNY+ E+  D  L     +G+D+ 
Sbjct: 169 GARVIATASSAEG-------AELVRQA----GADAVFNYRAEDLADRILAATAGQGVDVI 217

Query: 241 FEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY 300
            E +    L   L  +   GRI          L     ++ LM    K   + G +++  
Sbjct: 218 IEVLANVNLAKDLDVLAPGGRIVV---YGSGGLRGTIPINPLM---AKEASIRGVLLYTA 271

Query: 301 FP-QYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
            P + +   +A+   + +G +  V      LE A AA   + SG  +GK ++  
Sbjct: 272 TPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 91.5 bits (228), Expect = 6e-21
 Identities = 82/349 (23%), Positives = 126/349 (36%), Gaps = 82/349 (23%)

Query: 23  PKETDMLVK--ASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPI 80
           P   ++LVK  A+ +        N +         D  +R  +     P      PG   
Sbjct: 25  PGPGEVLVKVHAAGV--------NPV---------DLKIREGLLKAAFPLTLPLIPGH-- 65

Query: 81  EGFGVAKVVDSGHPEFKKGDLVWGTTGWE------EY------SLIKNPQGLFKIHHTD- 127
           +  GV   V  G   FK GD V+G T +       EY       L   P  L      + 
Sbjct: 66  DVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANL---SFEEA 122

Query: 128 --VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVV 185
             +PL+         G+TAW   +E+   K G+ + +  A+G VG    Q AK  G  V+
Sbjct: 123 AALPLA---------GLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVI 173

Query: 186 GSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG 245
            +A +              + L+   G D+  +Y + +   AA     P G+D   + VG
Sbjct: 174 ATASAAN-----------ADFLR-SLGADEVIDYTKGDFERAAA----PGGVDAVLDTVG 217

Query: 246 GKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYS 305
           G+ L   L  ++  GR+     +S       E       V    + +E            
Sbjct: 218 GETLARSLALVKPGGRL-----VSIAGPPPAEQAAKRRGVRAGFVFVEP---------DG 263

Query: 306 RFLDAVLPYIREGKV-VYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
             L  +   +  GK+   V+ V   LE+A  A   L SG   GK  VV+
Sbjct: 264 EQLAELAELVEAGKLRPVVDRVFP-LEDAAEAHERLESGHARGK--VVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 87.3 bits (217), Expect = 2e-19
 Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 32/244 (13%)

Query: 110 EYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAV 169
             +L+  P  L        PL++         +TAW         + GE + V  A   V
Sbjct: 129 ARNLLPIPDNLSFEEAAAAPLTF---------LTAWHMLVTRARLRPGETVLVHGAGSGV 179

Query: 170 GQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL 229
           G    Q AKL G  V+ +AGS +K+          E  K   G D   +Y++E+ +    
Sbjct: 180 GSAAIQIAKLFGATVIATAGSEDKL----------ERAKE-LGADYVIDYRKEDFVREVR 228

Query: 230 KRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR 289
           +     G+D+  EHVG    +  L ++   GR+  CG  + Y     E   +L +V +++
Sbjct: 229 ELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQ 283

Query: 290 IRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQ 349
           + + G          +   D  L  +  GK+  V D    LE A  A   L S    GK 
Sbjct: 284 LSILG----STMGTKAEL-DEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGK- 337

Query: 350 LVVV 353
            +V+
Sbjct: 338 -IVL 340

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 85.2 bits (212), Expect = 1e-18
 Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 23/213 (10%)

Query: 142 MTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQS 201
            TAW   +++   K GE + +   +  VG    Q AK +G  V+ +AGS EK+       
Sbjct: 125 FTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKL------- 177

Query: 202 QLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGR 261
           +         G D A NY+ E+  +   +     G+D+  + VGG  L   L  +   GR
Sbjct: 178 EACR----ALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGR 233

Query: 262 IAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY-----SRFLDAVLPYIR 316
           +   G+     L   +   +L  ++ KR+ + G  +     +      + F + V P   
Sbjct: 234 LVLIGL-----LGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFA 288

Query: 317 EGKV-VYVEDVADGLENAPAALVGLFSGRNVGK 348
            G++   ++ V   LE A  A   + S  ++GK
Sbjct: 289 SGRIRPVIDKVFP-LEEAAEAHRRMESNEHIGK 320

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 84.1 bits (209), Expect = 2e-18
 Identities = 78/301 (25%), Positives = 117/301 (38%), Gaps = 58/301 (19%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGW---------EEYSLIKNPQGLFKIH 124
           F PGS  E  GV + V  G   FK GD V   TG             ++   P GL    
Sbjct: 59  FVPGS--EVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEE 116

Query: 125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
              +P++Y          TA+         + GE + V  A+G VG    Q AK +G  V
Sbjct: 117 AAALPVTY---------GTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARV 167

Query: 185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV 244
           + +A S EK          + L +   G D   +Y++ +  +         G+D+ ++ V
Sbjct: 168 IAAASSEEK----------LALAR-ALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPV 216

Query: 245 GGKMLDAVLLNMRLHGRI----AACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY 300
           GG + +A L ++   GR+     A G I Q          NL+ +  K I + G     Y
Sbjct: 217 GGDVFEASLRSLAWGGRLLVIGFASGEIPQIPA-------NLLLL--KNISVVGV----Y 263

Query: 301 FPQYSRF--------LDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV 352
           +  Y+R         L  +   + EGK+         LE A  AL  L   +  GK  VV
Sbjct: 264 WGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGK--VV 321

Query: 353 V 353
           +
Sbjct: 322 L 322

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 81.6 bits (202), Expect = 1e-17
 Identities = 64/251 (25%), Positives = 84/251 (33%), Gaps = 44/251 (17%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV---WGTTGWEEYSLIKNPQGLFKIHHTD--- 127
              G   EG GV   V  G    K GD V               +   G   +       
Sbjct: 31  LILGH--EGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGILGEGLDGG 88

Query: 128 ------VP----------LSYYTGIL-GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVG 170
                 VP          LS     L   P  TA+         K G+ + V  A G VG
Sbjct: 89  FAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VG 147

Query: 171 QLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALK 230
            L  Q AK  G  V+ +  S EK          +EL K + G D   +YKEE DL+  L+
Sbjct: 148 LLAAQLAKAAGARVIVTDRSDEK----------LELAK-ELGADHVIDYKEE-DLEEELR 195

Query: 231 RCFPEGIDIYFEHVGGKM-LDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR 289
                G D+  + VGG   L   L  +R  GRI   G  S            L  +++K 
Sbjct: 196 LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDD-----LRRLLFKE 250

Query: 290 IRMEGFVVFDY 300
           + + G      
Sbjct: 251 LTIIGSTGGTR 261

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 77.2 bits (191), Expect = 7e-16
 Identities = 72/300 (24%), Positives = 111/300 (37%), Gaps = 61/300 (20%)

Query: 80  IEGFGVAKVVD---SGHPEFKKGDLVWGTTG--------WEEY-----SLI-KNPQGLFK 122
           I G  VA VV+    G   F+ GD V+G  G          EY      L+   P  L  
Sbjct: 60  ILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSM 119

Query: 123 IHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
                +PL          G+TAW G  +  A + G+ + +   +G VG +  Q AK  G 
Sbjct: 120 REAAALPL---------VGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA 170

Query: 183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
            V  +A S +  +                G D    Y+E    +   +     G D+ F+
Sbjct: 171 RVYATASSEKAAFA------------RSLGADPIIYYRETVV-EYVAEHTGGRGFDVVFD 217

Query: 243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP 302
            VGG+ LDA    + L+GR+ +    +          H+L  + ++     G  VF   P
Sbjct: 218 TVGGETLDASFEAVALYGRVVSILGGAT---------HDLAPLSFRNATYSG--VFTLLP 266

Query: 303 QYSRF--------LDAVLPYIREGKV-VYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
             +          L      +  G++   ++     LE A AA   L SG   GK  +V+
Sbjct: 267 LLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGK--IVI 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 71.6 bits (176), Expect = 3e-15
 Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 22/146 (15%)

Query: 168 AVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLD 226
            VG    Q AK +G   V+    S EK+          EL K + G D   NY++E D  
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKL----------ELAK-ELGADHVINYRDE-DFV 48

Query: 227 AALKRCFP-EGIDIYFEHVG-GKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMN 284
             ++      G+D+  + VG    L+  L  +R  GR+   G+     +  P     L +
Sbjct: 49  ERVRELTGGRGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFP-----LRD 103

Query: 285 VVYKRIRMEGFVVFDY--FPQYSRFL 308
           ++ K + + G +      F +    L
Sbjct: 104 LLLKELTILGSLGGGREEFEEALELL 129

Length = 131

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 75.0 bits (185), Expect = 4e-15
 Identities = 74/296 (25%), Positives = 118/296 (39%), Gaps = 43/296 (14%)

Query: 76  PG-SPIEGFGVAKVV---DSGHPEFKKGDLVWGTT---GWEEYSLIKN------PQGLFK 122
           PG S I G  VA  V     G   +K GD V       G+ EY  +        P+GL  
Sbjct: 55  PGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSL 114

Query: 123 IHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
           +    +P ++          T W+  ++    K GE + +   +  +G    Q AK  G 
Sbjct: 115 VEAAALPETF---------FTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA 165

Query: 183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
            V  +AGS EK       +    L     G D A NY+EE+ ++        +G+D+  +
Sbjct: 166 RVFTTAGSDEKC------AACEAL-----GADIAINYREEDFVEVVKAETGGKGVDVILD 214

Query: 243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP 302
            VGG  L+  +  + L GRI   G          +   +L  ++ KR+ + G  +     
Sbjct: 215 IVGGSYLNRNIKALALDGRIVQIGF-----QGGRKAELDLGPLLAKRLTITGSTLRARPV 269

Query: 303 QYSR-----FLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
                      + V P +  G+V  V D    LE+A  A   + SG ++GK ++ V
Sbjct: 270 AEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.8 bits (182), Expect = 8e-15
 Identities = 87/346 (25%), Positives = 133/346 (38%), Gaps = 65/346 (18%)

Query: 23  PKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP--DFSSFTPGSPI 80
           PK  ++LVK  + S+      N +  K       P +     F   P  DF+        
Sbjct: 24  PKPGEVLVKVHAASV------NPVDWKLRRG--PPKLLLGRPFPPIPGMDFA-------- 67

Query: 81  EGFGVAKVVDSGHPEFKKGDLVWGTTGWE------EYSLIKNPQGLFKIHHTDVP--LSY 132
              G    V SG   FK GD V+G    +      EY +     GL K      P  +S+
Sbjct: 68  ---GEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVA-PESGLAKK-----PEGVSF 118

Query: 133 YTG-ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR 191
                L + G+TA     +    K G+ + ++ ASG VG    Q AK +G +V G   +R
Sbjct: 119 EEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTR 178

Query: 192 EKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDA 251
                        EL+++  G D+  +Y  E   D        E  D+ F+ VG      
Sbjct: 179 N-----------AELVRS-LGADEVIDYTTE---DFVALTAGGEKYDVIFDAVGNSPFSL 223

Query: 252 V--LLNMRLHGR-IAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFL 308
               L ++  GR ++  G  S   L        L     +R++   F+        +  L
Sbjct: 224 YRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLG-GGGRRLKF--FLA----KPNAEDL 276

Query: 309 DAVLPYIREGKV-VYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
           + +   + EGK+   ++ V   LE+AP A   L SGR  GK  VV+
Sbjct: 277 EQLAELVEEGKLKPVIDSVYP-LEDAPEAYRRLKSGRARGK--VVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 72.1 bits (178), Expect = 3e-14
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 19/199 (9%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV-WGTTG--WEEYSLIKNPQGLFKIHHTDVPL 130
           F  G   EG GV + V  G   FK GD V +      + EY ++     L K+    +  
Sbjct: 56  FVLGV--EGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVV-PASRLVKLP-DGISD 111

Query: 131 SYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS 190
                +L + G+TA     E    K G+ + V AA+G VG L+ Q+AK +G  V+G+  S
Sbjct: 112 ETAAALL-LQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSS 170

Query: 191 REKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLD 250
            EK           EL +   G D   NY++E+ ++   +     G+D+ ++ VG    +
Sbjct: 171 EEK----------AELARAA-GADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFE 219

Query: 251 AVLLNMRLHGRIAACGMIS 269
             L ++R  G + + G  S
Sbjct: 220 GSLDSLRPRGTLVSFGNAS 238

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 71.9 bits (177), Expect = 4e-14
 Identities = 65/286 (22%), Positives = 108/286 (37%), Gaps = 31/286 (10%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLVW--GTTG-WEEYSLIKNPQGLFKIHHTDVPL 130
             PG+  EG GV   V SG      G  V   G  G W+EY +      L  +  +    
Sbjct: 58  AVPGN--EGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVA-PADDLIPVPDSISDE 114

Query: 131 SYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS 190
                 +  P +TAW    E      G+++  +AA+ AVG+++ Q AKL+G   +     
Sbjct: 115 QAAMLYI-NP-LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTI--NVV 170

Query: 191 REKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALK-RCFPEGIDIYFEHVGGKML 249
           R          + VE LK   G D+  +     DL   +K      G  +  + VGG+  
Sbjct: 171 RR--------DEQVEELKAL-GADEVIDS-SPEDLAQRVKEATGGAGARLALDAVGGESA 220

Query: 250 DAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRF-- 307
             +  ++R  G +   G++S   +  P  V      ++K I + GF +  +    ++   
Sbjct: 221 TRLARSLRPGGTLVNYGLLSGEPVPFPRSV-----FIFKDITVRGFWLRQWLHSATKEAK 275

Query: 308 ---LDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQL 350
                 V+  +  G +         LE+   A+         GK L
Sbjct: 276 QETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVL 321

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 67.6 bits (166), Expect = 1e-12
 Identities = 57/261 (21%), Positives = 96/261 (36%), Gaps = 46/261 (17%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV----------WGTTGWEEY------SLIKNP 117
              G   E  GV + V +G   F  GD V          +GT    EY      +++K P
Sbjct: 59  ARLGY--EAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYA--EYALVPAAAVVKLP 114

Query: 118 QGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFA 177
            GL     + V  +     L M  +TA+    E+   + G+ + ++AAS +VG    Q A
Sbjct: 115 DGL-----SFVEAA----ALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIA 165

Query: 178 KLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI 237
              G  V+ +  + EK         L+ L     G        EE+ +   L+    +G+
Sbjct: 166 NAAGATVIATTRTSEKR------DALLAL-----GAAHVIVTDEEDLVAEVLRITGGKGV 214

Query: 238 DIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV 297
           D+ F+ VGG     +   +   G +   G      LS       L   + K +   G+ +
Sbjct: 215 DVVFDPVGGPQFAKLADALAPGGTLVVYG-----ALSGEPTPFPLKAALKKSLTFRGYSL 269

Query: 298 FDYFPQYSRFLDAVLPYIREG 318
            +            + +I +G
Sbjct: 270 DE-ITLDPEARRRAIAFILDG 289

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 65.3 bits (160), Expect = 7e-12
 Identities = 72/294 (24%), Positives = 115/294 (39%), Gaps = 47/294 (15%)

Query: 84  GVAKVVDSGHP--EFKKGDLVW------GTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTG 135
           GV +VV  G      K GD V       GT  W  ++++     L K+   DV       
Sbjct: 71  GVGEVVKVGSGVKSLKPGDWVIPLRPGLGT--WRTHAVVP-ADDLIKVP-NDVDPEQA-A 125

Query: 136 ILGMPGMTAW---AGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE 192
            L +   TA+     F      + G+++  + A+ AVGQ V Q AKL+G   +     R 
Sbjct: 126 TLSVNPCTAYRLLEDF---VKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP 182

Query: 193 KVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA--LKRCFPEGIDIYFEHVGGKMLD 250
            +       +L E LK   G D     +E   L A   LK        +    VGGK   
Sbjct: 183 DL------EELKERLK-ALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSAT 235

Query: 251 AVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSR---- 306
            +   +   G +   G +S     QP  V     +++K I + GF +  +  + +     
Sbjct: 236 ELARLLSPGGTMVTYGGMSG----QPVTV-PTSLLIFKDITLRGFWLTRWLKRANPEEKE 290

Query: 307 -FLDAVLPYIREGKVVYV------EDVADGLENAPAALVGLFSGRNVGKQLVVV 353
             L+ +   IREGK+         +D  +  ++A A  +    G   GKQ++V+
Sbjct: 291 DMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGG---GKQVLVM 341

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 12/124 (9%)

Query: 140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPM 199
            G+TA+   ++    + G  I ++  +G VG    Q AK  G  V+ +   R        
Sbjct: 125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCSKRN------- 177

Query: 200 QSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLH 259
                E +K   G D   +Y +E+  +   +     G+D   + VGG+   A+   +  +
Sbjct: 178 ----FEYVK-SLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFN 232

Query: 260 GRIA 263
           G + 
Sbjct: 233 GHLV 236

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 69/298 (23%), Positives = 115/298 (38%), Gaps = 43/298 (14%)

Query: 76  PG-SPIEGFGVAKVV---DSGHPEFKKGDLVWGTT---GWEEY------SLIKNPQGLFK 122
           PG S I G  VA  V    S    FK+GD V       G+ EY       ++  PQG   
Sbjct: 56  PGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTF 115

Query: 123 IHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
                +P ++         +TAW    +    KKG+ + + A +  VG    Q A+  G 
Sbjct: 116 EEAAAIPEAF---------LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA 166

Query: 183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF-PEGIDIYF 241
             + +  S EKV               K        Y +E      +K+    +G+++  
Sbjct: 167 ATIITTSSEEKVDFC-----------KKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVL 215

Query: 242 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYF 301
           + VGG  L      + + G+    G +    + +     NL+ ++ KR  +    +    
Sbjct: 216 DCVGGSYLSETAEVLAVDGKWIVYGFMGGAKVEKF----NLLPLLRKRASIIFSTLRSRS 271

Query: 302 PQY-----SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS 354
            +Y     + F   VLPY+ EG++  + D    LE    A   L   +N+GK ++ V+
Sbjct: 272 DEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329

Length = 334

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 65/291 (22%), Positives = 114/291 (39%), Gaps = 47/291 (16%)

Query: 80  IEGFGVAKVVDSGHPEFKKGDLVWGTTG--------WEEYSLIKNPQGL-FKIHHTDVPL 130
           +E  G+   V SG    K GD V G            +   ++K P  L F+   T +P+
Sbjct: 33  LECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARLVVKIPDSLSFEEAAT-LPV 91

Query: 131 SYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS 190
           +Y         +TA+    ++   +KGE + + AA+G VGQ   Q A+ +G  V  + GS
Sbjct: 92  AY---------LTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGS 142

Query: 191 REKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF-PEGIDIYFEHVGGKML 249
            EK           E L+   G  D      +      + R     G+D+    + G++L
Sbjct: 143 EEK----------REFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELL 192

Query: 250 DAVLLNMRLHGRIAACG---MISQYNLSQPEGV---HNLMNVVYKRIRMEGFVVFDYFPQ 303
            A   + R    +A  G    I + ++     +     L NV +  + ++   +    P+
Sbjct: 193 RA---SWRC---LAPFGRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQ--LARERPE 244

Query: 304 -YSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
                L  VL  +  G +  +        +   A   + SG+++GK  VV+
Sbjct: 245 LLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGK--VVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 70/306 (22%), Positives = 118/306 (38%), Gaps = 48/306 (15%)

Query: 75  TPGSPIE-GFGVAKVVDS---GHPEFKKGDLVWGTT---GWEEYSLIKNPQGLFKIHHTD 127
            P  P   GF  A  V++   G  +FK GD V G T   G+ E  +      +F +    
Sbjct: 53  APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEV-VNVPADQVFPLPD-- 109

Query: 128 VPLSYYTG-ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVV 185
             +S+       +  +TA+   +E+   + G+ + V +A+G VG   GQ  K +    VV
Sbjct: 110 -GMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVV 168

Query: 186 GSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG 245
           G+A S  K           E LK   G     +Y+ + D    +K+  PEG+DI  + +G
Sbjct: 169 GTA-SASK----------HEALKEN-GVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALG 215

Query: 246 GKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRME------------ 293
           G+        ++  GR+   G  +     +     +   +  K                 
Sbjct: 216 GEDTRKSYDLLKPMGRLVVYGAANLVTGEKR----SWFKLAKKWWNRPKVDPMKLISENK 271

Query: 294 ---GFV---VFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVG 347
              GF    +F+     +  +D +L    EGK+    D     E    A+  L S +N+G
Sbjct: 272 SVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIG 331

Query: 348 KQLVVV 353
           K ++  
Sbjct: 332 KVVLTP 337

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 60.2 bits (147), Expect = 3e-10
 Identities = 56/223 (25%), Positives = 85/223 (38%), Gaps = 54/223 (24%)

Query: 75  TPGSPIEGFGVAKVVDSGHPEFKKGDLV-----------WGTTGWEEYS------LIKNP 117
           TPG  I+  G   VV S  P F++GD V            G  G+ EY       ++  P
Sbjct: 60  TPG--IDAAGT--VVSSDDPRFREGDEVLVTGYDLGMNTDG--GFAEYVRVPADWVVPLP 113

Query: 118 QGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI----CAPKKGEYIYVSAASGAVGQLV 173
           +GL               ILG  G TA    + +      P+ G  + V+ A+G VG + 
Sbjct: 114 EGL---------SLREAMILGTAGFTAALSVHRLEDNGQTPEDGP-VLVTGATGGVGSIA 163

Query: 174 GQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA--LKR 231
                 +G  VV   G  E+           + LK   G  +  + ++  D      LK 
Sbjct: 164 VAILAKLGYTVVALTGKEEQA----------DYLK-SLGASEVLDREDLLDESKKPLLKA 212

Query: 232 CFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLS 274
            +   ID     VGG +L  +L   +  G +A+CG  +   L+
Sbjct: 213 RWAGAIDT----VGGDVLANLLKQTKYGGVVASCGNAAGPELT 251

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 59.4 bits (144), Expect = 6e-10
 Identities = 75/339 (22%), Positives = 129/339 (38%), Gaps = 50/339 (14%)

Query: 23  PKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEG 82
           P E  + V+A S++       + + V+ LY +  PY               FTPG   E 
Sbjct: 7   PGEVRIQVRAFSLNF-----GDLLCVRGLYPTMPPY--------------PFTPG--FEA 45

Query: 83  FGVAKVVDSGHPEFKKGDLVWGTTGWE---EYSLIKNPQGLFKIHHTDVPLSYYTGI-LG 138
            GV + V         GD V   TG       +L+  P+   ++      LS+     L 
Sbjct: 46  SGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPED--QVVRKPASLSFEEACALP 103

Query: 139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIP 198
           +  +T    F       KGE+I +  A+G  G +  Q A+L G  +  +A S +K     
Sbjct: 104 VVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDK----- 157

Query: 199 MQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP-EGIDIYFEHVGGKMLDAVLLNMR 257
                +E LK + G     NY EE D +  + R     G+D+    + G+ +   L  + 
Sbjct: 158 -----LEYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLA 210

Query: 258 LHGR---IAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 314
             GR   IA   + S  ++     + N  +     +R    +  ++    + +   ++  
Sbjct: 211 PGGRYVEIAMTALKSAPSVDL-SVLSNNQSFHSVDLRKLLLLDPEFI---ADYQAEMVSL 266

Query: 315 IREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
           + EG++          ++   A   L    N+GK  VVV
Sbjct: 267 VEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGK--VVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 57.5 bits (140), Expect = 3e-09
 Identities = 55/217 (25%), Positives = 82/217 (37%), Gaps = 29/217 (13%)

Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQ 200
           G+TAW   + +   K G+ + V    G V     QFAK  G  V+ ++ S EK       
Sbjct: 145 GLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFALQFAKAAGARVIATSSSDEK------- 196

Query: 201 SQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP-EGIDIYFEHVGGKMLDAVLLNMRLH 259
              +E  K   G D   NY+   D    + +     G+D   E  G   L   +  +   
Sbjct: 197 ---LERAK-ALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPG 252

Query: 260 GRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY--FPQYSRFLDAVLPYIRE 317
           G I+  G      LS  E    L+ ++ K   + G  V     F   +R ++A       
Sbjct: 253 GVISLIGF-----LSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAH------ 301

Query: 318 GKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS 354
            ++  V D     E A  A   L SG + GK  VV+ 
Sbjct: 302 -RIRPVIDRVFPFEEAKEAYRYLESGSHFGK--VVIR 335

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 55.8 bits (135), Expect = 9e-09
 Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 28/200 (14%)

Query: 153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG 212
             KKG+ + V+ A G VG    Q AK +G  V+    S EK          +++LK    
Sbjct: 159 GVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEK----------LKILKELGA 208

Query: 213 FDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYN 272
                  K   D+          G D+  E VG   ++  L ++   GR+   G      
Sbjct: 209 DYVIDGSKFSEDVKKLG------GADVVIELVGSPTIEESLRSLNKGGRLVLIG----NV 258

Query: 273 LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRF-LDAVLPYIREGKVVYVEDVADGLE 331
              P  +   + ++ K IR+ G +        ++  ++  L  ++EGK+  V D    LE
Sbjct: 259 TPDPAPLRPGL-LILKEIRIIGSI------SATKADVEEALKLVKEGKIKPVIDRVVSLE 311

Query: 332 NAPAALVGLFSGRNVGKQLV 351
           +   AL  L SG+ VG+ ++
Sbjct: 312 DINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.0 bits (128), Expect = 8e-08
 Identities = 65/297 (21%), Positives = 105/297 (35%), Gaps = 50/297 (16%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTT---GWEEY------SLIKNPQGLFKIH 124
           FTPG  +   G    + SG   F+ GD V   T   G  EY       L+  P+G+    
Sbjct: 59  FTPGYDL--VGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAE 116

Query: 125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
              + L+Y         +TA+   +       G+ + +  ASG VGQ + + A L G  V
Sbjct: 117 AVCLVLNY---------VTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEV 167

Query: 185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV 244
            G+A  R         + L EL              +    D       P G+D+ F+ V
Sbjct: 168 YGTASERNH-------AALRELGATPI---------DYRTKDWLPAMLTPGGVDVVFDGV 211

Query: 245 GGKMLDAVLLNMRLHGRIAACGM---ISQYNLSQPEGVH-----NLMNVVYKRIRMEGFV 296
           GG+  +     +   G +   G    + Q   S             + ++    R   + 
Sbjct: 212 GGESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYY 271

Query: 297 VFDYF----PQYSRFLDAVLPYIREGKV-VYVEDVADGLENAPAALVGLFSGRNVGK 348
           V+         + + L  +L  + +GK+   +      L     A   L SG+ VGK
Sbjct: 272 VWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLP-LSEVAEAHRLLESGKVVGK 327

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 59/217 (27%), Positives = 87/217 (40%), Gaps = 57/217 (26%)

Query: 75  TPGSPIEGFGVAKVVDSGHPEFKKGDLV-----------WGTTGWEEYS------LIKNP 117
            PG  I+  G   VV S  P F++GD V            G  G+ +Y+      L+  P
Sbjct: 59  IPG--IDAAGT--VVSSEDPRFREGDEVIVTGYGLGVSHDG--GYSQYARVPADWLVPLP 112

Query: 118 QGLFKIHHTDVPLSYYTG-ILGMPGMTAWAGFYEI----CAPKKGEYIYVSAASGAVGQL 172
           +GL          S      LG  G TA      +      P+ G  + V+ A+G VG L
Sbjct: 113 EGL----------SLREAMALGTAGFTAALSVMALERNGLTPEDGP-VLVTGATGGVGSL 161

Query: 173 -VGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL-K 230
            V   +KL G  VV S G  E+           + LK + G  +  + ++ +     L K
Sbjct: 162 AVAILSKL-GYEVVASTGKAEEE----------DYLK-ELGASEVIDREDLSPPGKPLEK 209

Query: 231 RCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGM 267
             +   +D     VGG  L  VL  ++  G +AACG+
Sbjct: 210 ERWAGAVDT----VGGHTLANVLAQLKYGGAVAACGL 242

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 51.0 bits (123), Expect = 4e-07
 Identities = 73/353 (20%), Positives = 117/353 (33%), Gaps = 78/353 (22%)

Query: 40  EEGSNAILVKNLYLS---CDPYMRARMSFNQDP-----DFSSFTPGSPIEGFGVAKVVDS 91
           + G + +LVK   ++    D   +        P     DF+           G    V S
Sbjct: 23  KPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPAILGCDFA-----------GTVVEVGS 71

Query: 92  GHPEFKKGDLVWGTT-----------GWEEYSLIKNPQGLFKIHHTDVP--LSYYTG-IL 137
           G   FK GD V G              ++EY +        KI     P  +S+     L
Sbjct: 72  GVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVAD-ADLTAKI-----PDNISFEEAATL 125

Query: 138 GMPGMTAWAGFY----------EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS 187
            +  +TA    +          +     KG+ + +   S +VG L  Q AKL G  V+ +
Sbjct: 126 PVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITT 185

Query: 188 AGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK 247
           A  +             +L+K   G D  F+Y + + ++        +       +    
Sbjct: 186 ASPKNF-----------DLVK-SLGADAVFDYHDPDVVEDIRAATGGK-----LRYA--- 225

Query: 248 MLDAV--LLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYS 305
            LD +    + +L           +     P           K   + G+ VF   P+  
Sbjct: 226 -LDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDR 284

Query: 306 RF---LDAVLP-YIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLVV 352
            F       LP  + EGK+    V  V  GLE     L  L  G+  G++LVV
Sbjct: 285 EFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVV 337

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 12/133 (9%)

Query: 137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWL 196
           +   G TA  G  ++     G+ + V+AA+G +G L+ Q AK  G  VVG+AG   K  L
Sbjct: 124 VVHDGRTA-LGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL 182

Query: 197 IPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNM 256
           +              G D A +Y   +  D   +     G+ +  + VGG +  A L  +
Sbjct: 183 V-----------RALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALL 231

Query: 257 RLHGRIAACGMIS 269
              GR    G  S
Sbjct: 232 APGGRFLTYGWAS 244

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 70/314 (22%), Positives = 110/314 (35%), Gaps = 67/314 (21%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV---W-----GT-----TGWE----------- 109
             PG   E  G    V  G    K GD V   W     G      +G E           
Sbjct: 59  LIPGH--EIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY 116

Query: 110 -------EYSLIKNPQGLFKI-HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIY 161
                  EY ++   + + KI    D         L   G+T +    +    K G+++ 
Sbjct: 117 TTDGGYAEYVVVP-ARYVVKIPEGLD---LAEAAPLLCAGITTYRALKKANV-KPGKWVA 171

Query: 162 VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE 221
           V  A G +G +  Q+AK MG  V+    S EK          +EL K K G D   N  +
Sbjct: 172 VVGA-GGLGHMAVQYAKAMGAEVIAITRSEEK----------LELAK-KLGADHVINSSD 219

Query: 222 ENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHN 281
            + L+A       E  D   + VG   L+  L  +R  G +   G+     +        
Sbjct: 220 SDALEAV-----KEIADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLL----P 270

Query: 282 LMNVVYKRIRMEGFVVFDYFPQYSRF-LDAVLPYIREGKVVYVEDVADGLENAPAALVGL 340
              ++ K I + G +V       +R  L+  L +  EGK+         L+    A   +
Sbjct: 271 AFLLILKEISIVGSLV------GTRADLEEALDFAAEGKIKPEILETIPLDEINEAYERM 324

Query: 341 FSGRNVGKQLVVVS 354
             G+  G+ ++ +S
Sbjct: 325 EKGKVRGRAVIDMS 338

Length = 339

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 42/179 (23%), Positives = 66/179 (36%), Gaps = 20/179 (11%)

Query: 143 TAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQ 202
           TA+ G  E  A + G  + V  A G +G L    AKL+G            V ++    +
Sbjct: 155 TAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGA---------SVVIVVDRSPE 204

Query: 203 LVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG-GKMLDAVLLNMRLHGR 261
            +EL K   G D   N  E++     L+     G D+  E VG    LD  L  +R  G 
Sbjct: 205 RLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGT 264

Query: 262 IAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKV 320
           +   G+         +       VV K + + G +       +    +  L  +  GK+
Sbjct: 265 VVVVGV-----YGGEDIPLPAGLVVSKELTLRGSLRPSGREDF----ERALDLLASGKI 314

Length = 350

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 45.1 bits (108), Expect = 2e-05
 Identities = 19/51 (37%), Positives = 29/51 (56%)

Query: 143 TAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK 193
           TA+    ++   + GE + + AA+G VGQ   Q A+ +G  V  +AGS EK
Sbjct: 90  TAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFATAGSPEK 140

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 44.8 bits (107), Expect = 3e-05
 Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 50/174 (28%)

Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG--SAGSREKVWLIP 198
           G+T +    +    K G+++ +S A G +G L  Q+AK MG  V+       + +     
Sbjct: 151 GVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE----- 204

Query: 199 MQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVL----- 253
                   L  + G D   ++K+ +D++A  +     G              AV+     
Sbjct: 205 --------LAKELGADAFVDFKKSDDVEAVKELTGGGG------------AHAVVVTAVS 244

Query: 254 -------LNM-RLHGRIAACGMISQYNLSQPEGVHNL--MNVVYKRIRMEGFVV 297
                  L+  R  G +   G+        P G   L   ++V + I + G +V
Sbjct: 245 AAAYEQALDYLRPGGTLVCVGL-------PPGGFIPLDPFDLVLRGITIVGSLV 291

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 35/166 (21%)

Query: 107 GWEEYSLI--KNPQGLFKIHHTDVPLSYYTGI---LGMPGMTAWAGFYEI-CAPKKGEYI 160
           G+ EY ++  KN   LFKI     P S    +   L +  +TA+         P  GE +
Sbjct: 117 GYAEYIVVPEKN---LFKI-----PDSISDELAASLPVAALTAYHALKTAGLGP--GETV 166

Query: 161 YVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYK 220
            V  ASG  G    Q AK+MG  V+  A SR K WL             +FG D+  +Y 
Sbjct: 167 VVFGASGNTGIFAVQLAKMMGAEVI--AVSR-KDWL------------KEFGADEVVDYD 211

Query: 221 EENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACG 266
           E  +    + +      D+    +G    D  L  +   GR+   G
Sbjct: 212 EVEEKVKEITKMA----DVVINSLGSSFWDLSLSVLGRGGRLVTFG 253

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 7e-05
 Identities = 48/199 (24%), Positives = 77/199 (38%), Gaps = 30/199 (15%)

Query: 155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD 214
           KKGE + V+ A G VG    Q AK +G  V+    S  K  ++   +  V ++ +KF  +
Sbjct: 161 KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKYADYV-IVGSKFS-E 218

Query: 215 DAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMIS-QYNL 273
           +                    G DI  E VG   L+  L ++ + G+I   G +      
Sbjct: 219 EVKKI---------------GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTY 263

Query: 274 SQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRF-LDAVLPYIREGKVVYVEDVADGLEN 332
           S   G      ++ K I + G +        ++  ++  L  + EGK+  V      L  
Sbjct: 264 SLRLGY-----IILKDIEIIGHI------SATKRDVEEALKLVAEGKIKPVIGAEVSLSE 312

Query: 333 APAALVGLFSGRNVGKQLV 351
              AL  L     +GK LV
Sbjct: 313 IDKALEELKDKSRIGKILV 331

Length = 334

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 41/177 (23%), Positives = 62/177 (35%), Gaps = 42/177 (23%)

Query: 88  VVDSGHP--EFKKGDLVWGTTGWE------------EYSLIKNPQGLFKIHHTDVPLSYY 133
           VVD G     F+ GD VWG                 E  + K P+ L       +P   Y
Sbjct: 85  VVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLP---Y 141

Query: 134 TGILGMPGMTAWAGFYEIC----APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG 189
                  G+TAW+    +         G+ + +   SG VG    Q  K  G +V  +  
Sbjct: 142 A------GLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCS 195

Query: 190 SREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
           +             + L+K   G DD  +Y  E+  +   +R      D+  + VGG
Sbjct: 196 TDA-----------IPLVK-SLGADDVIDYNNEDFEEELTERG---KFDVILDTVGG 237

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 53/211 (25%), Positives = 78/211 (36%), Gaps = 26/211 (12%)

Query: 143 TAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQ 202
           TA     E      GE + V+ ASG VG  + Q AK  G  V+  AG          + +
Sbjct: 165 TAE-NMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAG--------AAKEE 215

Query: 203 LVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRI 262
            V  L       D      +  L A  K    E +D+  + VGG +   +L  +R  GR 
Sbjct: 216 AVRALGA-----DTV-ILRDAPLLADAKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRY 269

Query: 263 AACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY 322
              G I     + P    +L  +  K + + G  +             ++ YI EG++  
Sbjct: 270 VTAGAI-----AGPVVELDLRTLYLKDLTLFGSTL-----GTREVFRRLVRYIEEGEIRP 319

Query: 323 VEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
           V      L     A       R+VGK LV+V
Sbjct: 320 VVAKTFPLSEIREAQAEFLEKRHVGK-LVLV 349

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 12/105 (11%)

Query: 85  VAKVVDSG--HPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVP--LSYYTGILGMP 140
           V +VV+ G     FK GD V+      E  ++  P  L       +P  L      L   
Sbjct: 29  VGRVVEVGSGVTGFKPGDRVFCFGPHAERVVV--PANLLVP----LPDGLPPERAALTAL 82

Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVV 185
             TA  G      P+ GE + V    G VG L  Q AK  G   V
Sbjct: 83  AATALNGV-RDAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREV 125

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 56/215 (26%), Positives = 85/215 (39%), Gaps = 50/215 (23%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTT---------GWEEYSLIKN------PQ 118
           F PG  I+  G   VV+S  P FK GD V  T+         G+ EY+ +        P+
Sbjct: 59  FIPG--IDLAGT--VVESNDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPK 114

Query: 119 GLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI----CAPKKGEYIYVSAASGAVGQLVG 174
           GL               ILG  G TA    + +      P++G  + V+ A+G VG L  
Sbjct: 115 GLTLKEAM---------ILGTAGFTAALSIHRLEENGLTPEQGP-VLVTGATGGVGSLAV 164

Query: 175 QFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEND--LDAALKRC 232
                +G  VV S G  +            + LK K G  +    +E  +  +    K+ 
Sbjct: 165 SILAKLGYEVVASTGKADA----------ADYLK-KLGAKEVIPREELQEESIKPLEKQR 213

Query: 233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGM 267
           +   +D     VGGK L  +L  ++  G +A  G+
Sbjct: 214 WAGAVD----PVGGKTLAYLLSTLQYGGSVAVSGL 244

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 34/202 (16%)

Query: 80  IEGFGVAKVVDSGHPEFKKGDLV------WGTT---GWEEYSLIKNPQGLFKIHHTDVPL 130
           IE  G  +    G   F  G  V       G T    + EY+L+ N Q ++ I   D  L
Sbjct: 62  IEAVGEVEEAPGG--TFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQ-VYAI---DSDL 115

Query: 131 SYYTGILG-MPGM--TAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS 187
           S+    L  +P    TAW   +     + G+ + +   + +VG    + AK +G  V  +
Sbjct: 116 SW--AELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTAT 173

Query: 188 AGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK 247
             S E+            LLK + G D+     ++  +   L+   P G D   E VG  
Sbjct: 174 TRSPER----------AALLK-ELGADEVV--IDDGAIAEQLRA-APGGFDKVLELVGTA 219

Query: 248 MLDAVLLNMRLHGRIAACGMIS 269
            L   L ++R  G +   G++ 
Sbjct: 220 TLKDSLRHLRPGGIVCMTGLLG 241

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 19/128 (14%)

Query: 149 YEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLK 208
           YEI   K  E     AA+G VG +  Q+AK +G  ++G+ GS +K           +  K
Sbjct: 136 YEI---KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQK----------AQRAK 182

Query: 209 NKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI 268
              G     NY+EEN ++   +    + + + ++ VG    +A L  ++  G      M+
Sbjct: 183 KA-GAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGL-----MV 236

Query: 269 SQYNLSQP 276
           S  N S P
Sbjct: 237 SFGNASGP 244

Length = 327

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 40/202 (19%), Positives = 60/202 (29%), Gaps = 21/202 (10%)

Query: 69  PDFSSFTPGSPI-EGFGVAKVVDSGHPEFKKGDLV--WGTTGWEEYSLIKNPQGLFKIHH 125
                  PG P  EG+G    +  G      GD V       + EY L      +     
Sbjct: 45  WFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLSGGAFAEYDLADADHAV----- 99

Query: 126 TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVV 185
               L       G P   A   F      + G+ + V  A G +G L  Q A   G   V
Sbjct: 100 PLPSLLDGQAFPGEPLGCALNVF-RRGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRV 157

Query: 186 GSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG 245
            +   R            + L +   G  +      E  ++   +     G D+  E VG
Sbjct: 158 IAIDRRPAR---------LALARE-LGATEVVTDDSEAIVERVRELTGGAGADVVIEAVG 207

Query: 246 GKMLDAVLLNM-RLHGRIAACG 266
            +    +   +    GR+   G
Sbjct: 208 HQWPLDLAGELVAERGRLVIFG 229

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 60/219 (27%), Positives = 84/219 (38%), Gaps = 59/219 (26%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV----W--GTTGWEEYS---------LIKNPQ 118
             PG  I+  G   VV+S  P FK GD V    W  G   W  Y+         L+  P+
Sbjct: 59  LVPG--IDLAGT--VVESSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPE 114

Query: 119 GLFKIHHTDVPLSYYTGILGMPGMTAW--------AGFYEICAPKKGEYIYVSAASGAVG 170
           GL          +     +G  G TA          G      P  G  + V+ A+G VG
Sbjct: 115 GL---------SARQAMAIGTAGFTAMLCVMALEDHGV----TPGDGP-VLVTGAAGGVG 160

Query: 171 QL-VGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL 229
            + V   A+L G  VV S G  E+           + L++  G  +  +  E ++    L
Sbjct: 161 SVAVALLARL-GYEVVASTGRPEEA----------DYLRS-LGASEIIDRAELSEPGRPL 208

Query: 230 -KRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGM 267
            K  +   +D     VGG  L  VL   R  G +AACG+
Sbjct: 209 QKERWAGAVDT----VGGHTLANVLAQTRYGGAVAACGL 243

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 45/215 (20%), Positives = 77/215 (35%), Gaps = 29/215 (13%)

Query: 130 LSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG 189
           + Y    +  P   A            G+ + V  A G +G L  Q+ K++G        
Sbjct: 134 VDYEEAAMIEPAAVALHAVRLA-GITLGDTVVVIGA-GTIGLLAIQWLKILGA------- 184

Query: 190 SREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG-GKM 248
             ++V  + +  + + + + + G DD  N KEE D++   +     G D+  E  G    
Sbjct: 185 --KRVIAVDIDDEKLAVAR-ELGADDTINPKEE-DVEKVRELTEGRGADLVIEAAGSPAT 240

Query: 249 LDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRI-RME----GFVVFDYFPQ 303
           ++  L   R  G++   G         P G   L    +++I R E    G       P 
Sbjct: 241 IEQALALARPGGKVVLVG--------IPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPF 292

Query: 304 YSRFLDAVLPYIREGKVVYVEDVAD--GLENAPAA 336
                   L  +  GK+     +     LE+ PAA
Sbjct: 293 PGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAA 327

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 36.6 bits (85), Expect = 0.004
 Identities = 35/143 (24%), Positives = 55/143 (38%), Gaps = 14/143 (9%)

Query: 211 FGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQ 270
            G D+  +Y  E+  +A       EG+D+  + VGG+ L   LL ++  GR+ + G    
Sbjct: 1   LGADEVIDYTTEDFEEAT----AGEGVDVVLDTVGGETLLRALLALKPGGRLVSIGG--- 53

Query: 271 YNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGL 330
                   +        + +R             +  L  +   +  GK+  V D    L
Sbjct: 54  ----PDLLLSVAAKAGGRGVRGVFLFPVSPGEAGAD-LAELAELVEAGKLRPVIDRVFPL 108

Query: 331 ENAPAALVGLFSGRNVGKQLVVV 353
           E A  A   L SGR  GK  VV+
Sbjct: 109 EEAAEAHRYLESGRARGK--VVL 129

Length = 129

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	356
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	100.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.98
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.97
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.95
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.76
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.65
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.55
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.32
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.21
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.45
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.4
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.4
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.37
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.25
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.15
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.1
PLN02494	477	adenosylhomocysteinase	98.08
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.01
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.94
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.92
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.92
PRK05993	277	short chain dehydrogenase; Provisional	97.89
PRK08324	681	short chain dehydrogenase; Validated	97.89
PRK05693	274	short chain dehydrogenase; Provisional	97.89
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.86
PRK12742	237	oxidoreductase; Provisional	97.86
PRK06182	273	short chain dehydrogenase; Validated	97.81
PRK07109	334	short chain dehydrogenase; Provisional	97.76
PRK05872	296	short chain dehydrogenase; Provisional	97.76
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.74
PRK08265	261	short chain dehydrogenase; Provisional	97.72
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.7
PRK07576	264	short chain dehydrogenase; Provisional	97.63
PRK07825	273	short chain dehydrogenase; Provisional	97.62
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.62
PRK07062	265	short chain dehydrogenase; Provisional	97.58
PRK07814	263	short chain dehydrogenase; Provisional	97.56
PRK08339	263	short chain dehydrogenase; Provisional	97.56
PRK06139	330	short chain dehydrogenase; Provisional	97.55
PRK06198	260	short chain dehydrogenase; Provisional	97.54
PRK07806	248	short chain dehydrogenase; Provisional	97.54
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.54
PRK12939	250	short chain dehydrogenase; Provisional	97.54
PRK07832	272	short chain dehydrogenase; Provisional	97.52
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.52
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.52
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.5
PRK12829	264	short chain dehydrogenase; Provisional	97.5
PRK06500	249	short chain dehydrogenase; Provisional	97.48
PRK06128	300	oxidoreductase; Provisional	97.48
PRK07326	237	short chain dehydrogenase; Provisional	97.47
PLN03209	576	translocon at the inner envelope of chloroplast su	97.45
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.44
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.43
PRK06180	277	short chain dehydrogenase; Provisional	97.41
PRK06057	255	short chain dehydrogenase; Provisional	97.41
PRK09186	256	flagellin modification protein A; Provisional	97.41
PRK08267	260	short chain dehydrogenase; Provisional	97.41
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.41
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.41
PRK06484	520	short chain dehydrogenase; Validated	97.41
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.4
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.39
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.38
PRK12828	239	short chain dehydrogenase; Provisional	97.38
PRK07985	294	oxidoreductase; Provisional	97.37
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.36
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.35
PRK07831	262	short chain dehydrogenase; Provisional	97.34
PLN02780	320	ketoreductase/ oxidoreductase	97.34
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.34
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.34
PRK05866	293	short chain dehydrogenase; Provisional	97.33
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.33
PRK10538	248	malonic semialdehyde reductase; Provisional	97.33
PRK06484	520	short chain dehydrogenase; Validated	97.32
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.32
PRK07060	245	short chain dehydrogenase; Provisional	97.3
PRK09242	257	tropinone reductase; Provisional	97.3
PRK07904	253	short chain dehydrogenase; Provisional	97.28
PRK07478	254	short chain dehydrogenase; Provisional	97.28
PRK05867	253	short chain dehydrogenase; Provisional	97.27
PRK06179	270	short chain dehydrogenase; Provisional	97.26
PRK06949	258	short chain dehydrogenase; Provisional	97.26
PRK08177	225	short chain dehydrogenase; Provisional	97.26
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.26
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.26
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.25
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.24
PRK08017	256	oxidoreductase; Provisional	97.23
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.21
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.2
PRK05876	275	short chain dehydrogenase; Provisional	97.2
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.2
PRK05854	313	short chain dehydrogenase; Provisional	97.19
PRK08263	275	short chain dehydrogenase; Provisional	97.19
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.19
PRK12937	245	short chain dehydrogenase; Provisional	97.19
PRK09072	263	short chain dehydrogenase; Provisional	97.19
PRK07063	260	short chain dehydrogenase; Provisional	97.19
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.18
PRK06196	315	oxidoreductase; Provisional	97.17
PRK08589	272	short chain dehydrogenase; Validated	97.16
PRK09291	257	short chain dehydrogenase; Provisional	97.15
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.15
PRK08862	227	short chain dehydrogenase; Provisional	97.13
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.13
PRK06914	280	short chain dehydrogenase; Provisional	97.13
PRK07890	258	short chain dehydrogenase; Provisional	97.12
PRK06194	287	hypothetical protein; Provisional	97.11
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.09
PRK06172	253	short chain dehydrogenase; Provisional	97.09
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.08
PRK05717	255	oxidoreductase; Validated	97.08
PRK06841	255	short chain dehydrogenase; Provisional	97.07
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.06
COG4122	219	Predicted O-methyltransferase [General function pr	97.05
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.04
PRK07035	252	short chain dehydrogenase; Provisional	97.04
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.03
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.02
PRK07677	252	short chain dehydrogenase; Provisional	97.02
PRK08643	256	acetoin reductase; Validated	97.02
PRK06701	290	short chain dehydrogenase; Provisional	97.01
PRK06181	263	short chain dehydrogenase; Provisional	97.0
PRK07024	257	short chain dehydrogenase; Provisional	96.99
PRK06953	222	short chain dehydrogenase; Provisional	96.99
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.98
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.98
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.96
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.96
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.96
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.95
KOG0725	270	consensus Reductases with broad range of substrate	96.95
PRK07454	241	short chain dehydrogenase; Provisional	96.95
PRK06483	236	dihydromonapterin reductase; Provisional	96.95
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.94
PRK05884	223	short chain dehydrogenase; Provisional	96.94
PRK07791	286	short chain dehydrogenase; Provisional	96.93
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.93
PLN02253	280	xanthoxin dehydrogenase	96.92
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.92
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.92
PRK12747	252	short chain dehydrogenase; Provisional	96.92
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.92
PRK06197	306	short chain dehydrogenase; Provisional	96.92
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.91
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.9
PRK07067	257	sorbitol dehydrogenase; Provisional	96.89
PRK08303	305	short chain dehydrogenase; Provisional	96.89
PRK07774	250	short chain dehydrogenase; Provisional	96.89
PRK06720	169	hypothetical protein; Provisional	96.89
PRK06114	254	short chain dehydrogenase; Provisional	96.88
PRK08703	239	short chain dehydrogenase; Provisional	96.87
PRK08251	248	short chain dehydrogenase; Provisional	96.86
PRK06138	252	short chain dehydrogenase; Provisional	96.84
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.83
PRK06482	276	short chain dehydrogenase; Provisional	96.83
PRK08628	258	short chain dehydrogenase; Provisional	96.83
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.83
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.82
PRK06125	259	short chain dehydrogenase; Provisional	96.82
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.8
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	96.8
PRK06398	258	aldose dehydrogenase; Validated	96.79
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	96.79
PRK12367	245	short chain dehydrogenase; Provisional	96.79
PLN02476	278	O-methyltransferase	96.79
PRK07069	251	short chain dehydrogenase; Validated	96.78
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.76
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.75
PRK12743	256	oxidoreductase; Provisional	96.73
PRK06940	275	short chain dehydrogenase; Provisional	96.73
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.73
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.72
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.71
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.71
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.7
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.7
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.7
PRK05875	276	short chain dehydrogenase; Provisional	96.69
PRK07074	257	short chain dehydrogenase; Provisional	96.69
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.68
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.68
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.67
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.66
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.66
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.66
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.64
CHL00194	317	ycf39 Ycf39; Provisional	96.63
PRK07577	234	short chain dehydrogenase; Provisional	96.62
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.62
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.61
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.61
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.6
PRK07775	274	short chain dehydrogenase; Provisional	96.59
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.58
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.57
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.56
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.55
PRK08278	273	short chain dehydrogenase; Provisional	96.55
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	96.55
PRK05599	246	hypothetical protein; Provisional	96.54
PRK08226	263	short chain dehydrogenase; Provisional	96.54
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	96.54
PRK07856	252	short chain dehydrogenase; Provisional	96.53
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.53
PLN02589	247	caffeoyl-CoA O-methyltransferase	96.52
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	96.51
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.5
PRK05650	270	short chain dehydrogenase; Provisional	96.48
PRK12746	254	short chain dehydrogenase; Provisional	96.47
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.47
PRK05855	582	short chain dehydrogenase; Validated	96.45
PRK07023	243	short chain dehydrogenase; Provisional	96.44
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.42
PRK06523	260	short chain dehydrogenase; Provisional	96.42
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.39
PRK06101	240	short chain dehydrogenase; Provisional	96.38
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	96.38
PRK09135	249	pteridine reductase; Provisional	96.37
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.37
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.36
PRK09134	258	short chain dehydrogenase; Provisional	96.36
PRK12744	257	short chain dehydrogenase; Provisional	96.35
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.35
PRK07402	196	precorrin-6B methylase; Provisional	96.32
TIGR00438	188	rrmJ cell division protein FtsJ.	96.29
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.28
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	96.28
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.28
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.27
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.27
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.25
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.24
PRK07201	657	short chain dehydrogenase; Provisional	96.24
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.23
PRK12827	249	short chain dehydrogenase; Provisional	96.21
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.2
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.2
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.19
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.19
PRK08264	238	short chain dehydrogenase; Validated	96.18
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.18
KOG1208	314	consensus Dehydrogenases with different specificit	96.14
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.12
PRK07102	243	short chain dehydrogenase; Provisional	96.11
PLN03075	296	nicotianamine synthase; Provisional	96.09
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.09
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.08
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.05
PRK04148	134	hypothetical protein; Provisional	96.04
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.03
PRK04457	262	spermidine synthase; Provisional	96.02
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.02
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	96.02
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.0
PRK06123	248	short chain dehydrogenase; Provisional	95.99
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.98
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	95.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	95.94
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.94
PRK08219	227	short chain dehydrogenase; Provisional	95.93
PLN00015	308	protochlorophyllide reductase	95.9
PRK07578	199	short chain dehydrogenase; Provisional	95.89
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	95.89
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	95.89
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.83
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	95.81
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.79
PLN00016	378	RNA-binding protein; Provisional	95.78
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.78
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.77
PRK13243	333	glyoxylate reductase; Reviewed	95.75
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	95.71
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.67
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.65
COG2910	211	Putative NADH-flavin reductase [General function p	95.63
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.61
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	95.6
PRK08618	325	ornithine cyclodeaminase; Validated	95.54
PRK07574	385	formate dehydrogenase; Provisional	95.53
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.51
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.5
PLN03139	386	formate dehydrogenase; Provisional	95.47
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.45
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	95.45
PRK00811	283	spermidine synthase; Provisional	95.44
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.44
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.43
PLN02366	308	spermidine synthase	95.41
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.36
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.33
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	95.33
PRK14967	223	putative methyltransferase; Provisional	95.33
PRK11207	197	tellurite resistance protein TehB; Provisional	95.33
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.32
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.31
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.25
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.25
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	95.25
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	95.24
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.23
PLN02244	340	tocopherol O-methyltransferase	95.21
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.19
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.17
PRK12824	245	acetoacetyl-CoA reductase; Provisional	95.15
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	95.14
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	95.14
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.13
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	95.11
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.1
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.09
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.09
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.09
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	95.09
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	95.08
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.07
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.06
PRK08317	241	hypothetical protein; Provisional	95.01
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.0
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.98
PRK15116	268	sulfur acceptor protein CsdL; Provisional	94.97
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.97
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	94.96
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	94.95
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	94.94
PRK07041	230	short chain dehydrogenase; Provisional	94.93
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	94.92
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.92
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	94.89
PRK06924	251	short chain dehydrogenase; Provisional	94.87
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	94.84
KOG1252	362	consensus Cystathionine beta-synthase and related	94.84
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.8
PLN02653	340	GDP-mannose 4,6-dehydratase	94.78
PLN02696	454	1-deoxy-D-xylulose-5-phosphate reductoisomerase	94.77
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.76
COG1028	251	FabG Dehydrogenases with different specificities (	94.76
PRK06849	389	hypothetical protein; Provisional	94.74
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.72
PRK07340	304	ornithine cyclodeaminase; Validated	94.72
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	94.66
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.65
PRK14982	340	acyl-ACP reductase; Provisional	94.65
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	94.63
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	94.61
PLN02686	367	cinnamoyl-CoA reductase	94.61
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.59
PRK14903	431	16S rRNA methyltransferase B; Provisional	94.58
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	94.57
PRK08655	437	prephenate dehydrogenase; Provisional	94.56
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.52
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.5
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	94.49
PRK01581	374	speE spermidine synthase; Validated	94.48
PRK08309	177	short chain dehydrogenase; Provisional	94.47
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.46
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	94.45
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	94.45
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.43
TIGR00243	389	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	94.41
PLN00203	519	glutamyl-tRNA reductase	94.36
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	94.35
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.34
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	94.32
PRK10258	251	biotin biosynthesis protein BioC; Provisional	94.32
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	94.29
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	94.29
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	94.28
PRK14902	444	16S rRNA methyltransferase B; Provisional	94.27
COG3963	194	Phospholipid N-methyltransferase [Lipid metabolism	94.25
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.23
PRK14901	434	16S rRNA methyltransferase B; Provisional	94.21
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	94.2
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.19
PLN02896	353	cinnamyl-alcohol dehydrogenase	94.18

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=2.1e-53  Score=382.24  Aligned_cols=307  Identities=24%  Similarity=0.331  Sum_probs=275.2

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEE
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V   86 (356)
                      +++|||+++.++  ++|    +++  .+++.| +|+++||+|+|+|+|+|++|++.+++......+|+|||||+  +|+|
T Consensus         1 ~~~mkA~~~~~~--~~p----l~i--~e~~~p-~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEi--vG~V   69 (339)
T COG1064           1 MMTMKAAVLKKF--GQP----LEI--EEVPVP-EPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEI--VGTV   69 (339)
T ss_pred             CcceEEEEEccC--CCC----ceE--EeccCC-CCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcce--EEEE
Confidence            458999999998  877    355  566666 88999999999999999999999997666667999999996  9999


Q ss_pred             EEecCCCCCCCCCCEEEE-c------------------------------cccceeEeecCCCcceeecCCCCCccchhc
Q 018404           87 KVVDSGHPEFKKGDLVWG-T------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTG  135 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~-~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a  135 (356)
                      +++|++|++|++||||.. +                              |+|+||+++++.+ ++++ |+++++. ++|
T Consensus        70 ~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~-~~~i-P~~~d~~-~aA  146 (339)
T COG1064          70 VEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARY-VVKI-PEGLDLA-EAA  146 (339)
T ss_pred             EEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHH-eEEC-CCCCChh-hhh
Confidence            999999999999999965 2                              8999999999999 9999 9996655 688


Q ss_pred             ccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE
Q 018404          136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD  215 (356)
Q Consensus       136 ~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  215 (356)
                      .+.|++.|.|++|++ .+++||++|+|.| .||+|.+++|+|+.+|++|++++++++++          +.++ ++|+++
T Consensus       147 pllCaGiT~y~alk~-~~~~pG~~V~I~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~----------e~a~-~lGAd~  213 (339)
T COG1064         147 PLLCAGITTYRALKK-ANVKPGKWVAVVG-AGGLGHMAVQYAKAMGAEVIAITRSEEKL----------ELAK-KLGADH  213 (339)
T ss_pred             hhhcCeeeEeeehhh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEeCChHHH----------HHHH-HhCCcE
Confidence            999999999999966 8999999999999 67999999999999999999999999998          9999 999999


Q ss_pred             EEecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeece
Q 018404          216 AFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGF  295 (356)
Q Consensus       216 vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (356)
                      +++.++. +..+.+++.    +|++||+++...++.+++.|+++|+++.+|.+..    ......+...++.+++++.|+
T Consensus       214 ~i~~~~~-~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~i~GS  284 (339)
T COG1064         214 VINSSDS-DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGS  284 (339)
T ss_pred             EEEcCCc-hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeEEEEE
Confidence            9998754 777777764    9999999998899999999999999999998641    122345677789999999999


Q ss_pred             eeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEec
Q 018404          296 VVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       296 ~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      ...+     ..++++++++..+|+++|.+...++++++++|++.|.+++..|++|++++
T Consensus       285 ~~g~-----~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         285 LVGT-----RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             ecCC-----HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            9988     88999999999999999999878999999999999999999999999875

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.2e-51  Score=379.49  Aligned_cols=316  Identities=29%  Similarity=0.436  Sum_probs=275.3

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      ||++++.++  |+|.    .++..++|.| .|+++||+|||.+++|||.|+..+++. .....+|+|+|.|  ++|+|++
T Consensus         1 mka~~~~~~--g~~~----~l~~~e~~~P-~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d--~aG~V~a   71 (326)
T COG0604           1 MKAVVVEEF--GGPE----VLKVVEVPEP-EPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSE--AAGVVVA   71 (326)
T ss_pred             CeEEEEecc--CCCc----eeEEEecCCC-CCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccce--eEEEEEE
Confidence            689999998  8886    3555788888 799999999999999999999988843 4455689999977  5999999


Q ss_pred             ecCCCCCCCCCCEEEEc------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEE
Q 018404           89 VDSGHPEFKKGDLVWGT------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYV  162 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI  162 (356)
                      +|++|++|++||+|+++      |+|+||++++++. ++++ |+++++. ++|+++++++|||++|....++++|++|||
T Consensus        72 vG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~-~~~~-P~~ls~~-eAAal~~~~~TA~~~l~~~~~l~~g~~VLV  148 (326)
T COG0604          72 VGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADW-LVPL-PDGLSFE-EAAALPLAGLTAWLALFDRAGLKPGETVLV  148 (326)
T ss_pred             eCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHH-ceeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence            99999999999999987      6999999999999 9999 9996665 799999999999999999899999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEE
Q 018404          163 SAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYF  241 (356)
Q Consensus       163 ~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vi  241 (356)
                      +||+|+||.+++||||++|+.+++++++.++.          +.++ ++|++++++|++. ++.+++++++++ ++|+||
T Consensus       149 ~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~----------~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         149 HGAAGGVGSAAIQLAKALGATVVAVVSSSEKL----------ELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             ecCCchHHHHHHHHHHHcCCcEEEEecCHHHH----------HHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEE
Confidence            99999999999999999998888888888887          8788 9999999999987 899999999998 999999


Q ss_pred             eCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHHHHHcCCC
Q 018404          242 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLPYIREGKV  320 (356)
Q Consensus       242 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~g~l  320 (356)
                      |++|++.+..++++|+++|+++.+|..++    ......+...++.+++...++..... ++...+.++++.+++.+|.+
T Consensus       217 D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l  292 (326)
T COG0604         217 DTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKL  292 (326)
T ss_pred             ECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999764    11223446677778888888766532 25557889999999999999


Q ss_pred             ccceeeeeCCCcHHHHHHHHHc-CCCcceEEEEe
Q 018404          321 VYVEDVADGLENAPAALVGLFS-GRNVGKQLVVV  353 (356)
Q Consensus       321 ~~~i~~~~~l~~~~~a~~~~~~-~~~~gk~vv~~  353 (356)
                      ++.++.+|||++..++...... ++..||+|+++
T Consensus       293 ~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         293 KPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             cceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            9999999999996665554444 58889999874

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-49  Score=368.87  Aligned_cols=339  Identities=66%  Similarity=1.124  Sum_probs=281.7

Q ss_pred             cccccEEEEeecccCCCCccceEEEEe-ecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKAS-SISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~-~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      ++++|.|++.+++.|.|.+++|++... +++.|.++++||||||+.++++||.|+..+..+.....+|+++|+++.|+|+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~   85 (348)
T PLN03154          6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGV   85 (348)
T ss_pred             cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEE
Confidence            457899999999999999999998774 3565534589999999999999999987654322233468999998789999


Q ss_pred             EEEecCCCCCCCCCCEEEEccccceeEeecCCC-cc--eeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEE
Q 018404           86 AKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQ-GL--FKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYV  162 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~l--~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI  162 (356)
                      |.++|+++++|++||+|+++|+|+||++++... .+  +++ |++++++.++++++++++|||+++.+.+.+++|++|+|
T Consensus        86 v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~-P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV  164 (348)
T PLN03154         86 SKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQL-QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFV  164 (348)
T ss_pred             EEEEecCCCCCCCCCEEEecCCcEEEEEEeccccceEEccC-cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEE
Confidence            999999999999999999999999999998752 24  345 78865543477899999999999988888999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEe
Q 018404          163 SAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE  242 (356)
Q Consensus       163 ~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid  242 (356)
                      +|++|++|++++|+||.+|++|+++++++++.          +.++.++|++.++|+++.+++.+.+++.+++++|++||
T Consensus       165 ~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~----------~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d  234 (348)
T PLN03154        165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV----------DLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFD  234 (348)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHH----------HHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEE
Confidence            99999999999999999999999999998887          77764699999999875226777888877668999999


Q ss_pred             CCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc
Q 018404          243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY  322 (356)
Q Consensus       243 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~  322 (356)
                      |+|+..+..++++++++|+++.+|..++.+........+...++.+++++.|+....+.....+.++++++++++|++++
T Consensus       235 ~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~  314 (348)
T PLN03154        235 NVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY  314 (348)
T ss_pred             CCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence            99999999999999999999999976543211111112455677889999988765543344577899999999999998


Q ss_pred             ceeeeeCCCcHHHHHHHHHcCCCcceEEEEecCC
Q 018404          323 VEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE  356 (356)
Q Consensus       323 ~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~  356 (356)
                      .++..|+|+++++|++.+.+++..||+|+++.++
T Consensus       315 ~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~  348 (348)
T PLN03154        315 IEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE  348 (348)
T ss_pred             ceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence            8888899999999999999999999999998764

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=3.7e-50  Score=337.87  Aligned_cols=322  Identities=21%  Similarity=0.284  Sum_probs=281.0

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      .|+..|-+++++.  |+++  +++++..+  .| +|.|+|.+||..|+|+|..|.-++.+-..+...|++||.|  ++|+
T Consensus         5 ~p~~~k~i~v~e~--Ggyd--vlk~ed~p--v~-~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmE--aaGv   75 (336)
T KOG1197|consen    5 SPPLLKCIVVTEF--GGYD--VLKLEDRP--VP-PPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGME--AAGV   75 (336)
T ss_pred             CCchheEEEEecc--CCcc--eEEEeeec--CC-CCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcc--cceE
Confidence            5667899999998  8884  56665544  45 8899999999999999999998887555577789999977  6999


Q ss_pred             EEEecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEE
Q 018404           86 AKVVDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYV  162 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI  162 (356)
                      |+++|++|+++++||||+.+   |.|+|+..+|... ++++ |+.+++. .+|++...++|||..+.+...+++|++||+
T Consensus        76 VvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~k-v~~v-pe~i~~k-~aaa~llq~lTAy~ll~e~y~vkpGhtVlv  152 (336)
T KOG1197|consen   76 VVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVK-VFKV-PEAITLK-EAAALLLQGLTAYMLLFEAYNVKPGHTVLV  152 (336)
T ss_pred             EEEecCCccccccccEEEEeccchhhheecccccee-eccC-CcccCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence            99999999999999999977   7899999999999 9999 9997666 688888899999999999999999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEE
Q 018404          163 SAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYF  241 (356)
Q Consensus       163 ~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vi  241 (356)
                      +.|+||+|++++|++|..|+.+|+++++.++.          +.++ +.|+++.++++.+ |+.+++.++|++ |+|+++
T Consensus       153 haAAGGVGlll~Ql~ra~~a~tI~~asTaeK~----------~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vy  220 (336)
T KOG1197|consen  153 HAAAGGVGLLLCQLLRAVGAHTIATASTAEKH----------EIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVY  220 (336)
T ss_pred             EeccccHHHHHHHHHHhcCcEEEEEeccHHHH----------HHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeee
Confidence            99999999999999999999999999999998          9999 9999999999998 999999999988 999999


Q ss_pred             eCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc---hhhHHHHHHHHHHHHHcC
Q 018404          242 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY---FPQYSRFLDAVLPYIREG  318 (356)
Q Consensus       242 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~g  318 (356)
                      |.+|.+.+..++.+|++.|.+|.+|..++..     .+.++..+..+.+.+....+..|   +........+++.++.+|
T Consensus       221 DsvG~dt~~~sl~~Lk~~G~mVSfG~asgl~-----~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg  295 (336)
T KOG1197|consen  221 DSVGKDTFAKSLAALKPMGKMVSFGNASGLI-----DPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSG  295 (336)
T ss_pred             ccccchhhHHHHHHhccCceEEEeccccCCC-----CCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcC
Confidence            9999999999999999999999999876642     23344445555555544443333   334455778889999999


Q ss_pred             CCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecCC
Q 018404          319 KVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE  356 (356)
Q Consensus       319 ~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~  356 (356)
                      .+++.|.++|||+++.+|+..+++....||+++.+.+|
T Consensus       296 ~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~  333 (336)
T KOG1197|consen  296 HLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE  333 (336)
T ss_pred             ccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence            99999999999999999999999999999999988764

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=1.5e-47  Score=331.01  Aligned_cols=330  Identities=46%  Similarity=0.808  Sum_probs=295.4

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      .+.+++...|.|.|..+++++++.++|   +|+++|||||+.|.+++|..+..++ ......+|+-+|.++.|-++-+.+
T Consensus         9 ~~~~~la~rP~g~p~~d~F~lee~~vp---~p~~GqvLl~~~ylS~DPymRgrm~-d~~SY~~P~~lG~~~~gg~V~~Vv   84 (340)
T COG2130           9 NRRIVLASRPEGAPVPDDFRLEEVDVP---EPGEGQVLLRTLYLSLDPYMRGRMS-DAPSYAPPVELGEVMVGGTVAKVV   84 (340)
T ss_pred             hheeeeccCCCCCCCCCCceeEeccCC---CCCcCceEEEEEEeccCHHHeeccc-CCcccCCCcCCCceeECCeeEEEE
Confidence            488999999999999999888766666   7799999999999999997666555 333667788999888775555566


Q ss_pred             cCCCCCCCCCCEEEEccccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchH
Q 018404           90 DSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAV  169 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~v  169 (356)
                      -|+.+.|++||.|.+..+|++|..++.+. +.|++|...+++.....|.+++.|||.+|.+.++.++|++|+|.+|+|++
T Consensus        85 ~S~~~~f~~GD~V~~~~GWq~y~i~~~~~-l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaV  163 (340)
T COG2130          85 ASNHPGFQPGDIVVGVSGWQEYAISDGEG-LRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAV  163 (340)
T ss_pred             ecCCCCCCCCCEEEecccceEEEeechhh-ceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEeccccc
Confidence            78899999999999999999999999998 99997777677767889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCchHH
Q 018404          170 GQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKML  249 (356)
Q Consensus       170 G~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  249 (356)
                      |..+.|+||..||+|+.++.++++.          +.+++.+|.+.++||+.+ ++.+.+.+.++.|+|+.||++|++.+
T Consensus       164 GsvvgQiAKlkG~rVVGiaGg~eK~----------~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~  232 (340)
T COG2130         164 GSVVGQIAKLKGCRVVGIAGGAEKC----------DFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVL  232 (340)
T ss_pred             chHHHHHHHhhCCeEEEecCCHHHH----------HHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHH
Confidence            9999999999999999999999999          999966999999999998 99999999999999999999999999


Q ss_pred             HHHHHhhccCCeEEEEccccccCCC-CCccccchHHHHhhcceeeceee-ecchhhHHHHHHHHHHHHHcCCCccceeee
Q 018404          250 DAVLLNMRLHGRIAACGMISQYNLS-QPEGVHNLMNVVYKRIRMEGFVV-FDYFPQYSRFLDAVLPYIREGKVVYVEDVA  327 (356)
Q Consensus       250 ~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~  327 (356)
                      ..++..|+.++|++.||..+.++.+ .+..+.....++.+.+++.||.. .++.....+.++++.+|+.+|+|+...+.+
T Consensus       233 DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~  312 (340)
T COG2130         233 DAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIV  312 (340)
T ss_pred             HHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeeh
Confidence            9999999999999999999988765 33455667778888999999998 444555669999999999999999998877


Q ss_pred             eCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          328 DGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       328 ~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      -.||++++||..+.+|++.||+|+++.+
T Consensus       313 dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         313 DGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             hhhhccHHHHHHHhcCCccceEEEEecC
Confidence            7999999999999999999999999864

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=2.4e-46  Score=349.09  Aligned_cols=331  Identities=70%  Similarity=1.202  Sum_probs=273.7

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecc--cccCCCCCeEEEEEEEeecCHHhhhhhccCCCC-CCCCCCCCCcceecEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSIS--LKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP-DFSSFTPGSPIEGFGVA   86 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~--~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~-~~~p~v~G~e~~~~G~V   86 (356)
                      .|.+++..+..+.|.++.|.+++..+|  .| +|+++||||||.+++|||.|++...++... ..+|+++|+++.|.|++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~   81 (338)
T cd08295           3 NKQVILKAYVTGFPKESDLELRTTKLTLKVP-PGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVA   81 (338)
T ss_pred             ceEEEEecCCCCCCCccceEEEEecCCcCCC-CCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEE
Confidence            356667666667777888999877763  35 789999999999999999999888743222 35688999988888998


Q ss_pred             EEecCCCCCCCCCCEEEEccccceeEeecC-CCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecC
Q 018404           87 KVVDSGHPEFKKGDLVWGTTGWEEYSLIKN-PQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAA  165 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga  165 (356)
                      ..+|+++++|++||+|+++|+|+||+++++ .. ++++||++++++.++++++++++|||+++.+.+++++|++|+|+|+
T Consensus        82 ~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~-~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga  160 (338)
T cd08295          82 KVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQD-LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAA  160 (338)
T ss_pred             EEEecCCCCCCCCCEEEecCCceeEEEecchhc-eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence            889999999999999999999999999999 67 9999446665553578899999999999988889999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhh-cCCCEEEecCCcccHHHHHHHhCCCCccEEEeCC
Q 018404          166 SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNK-FGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV  244 (356)
Q Consensus       166 ~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~  244 (356)
                      +|++|++++|+|+.+|++|+++++++++.          +.++ + +|+++++++.+..++.+.+++.+++++|++||++
T Consensus       161 ~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~----------~~~~-~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~  229 (338)
T cd08295         161 SGAVGQLVGQLAKLKGCYVVGSAGSDEKV----------DLLK-NKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNV  229 (338)
T ss_pred             ccHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECC
Confidence            99999999999999999999999999988          8888 6 9999999976422677788877756899999999


Q ss_pred             CchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccce
Q 018404          245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVE  324 (356)
Q Consensus       245 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i  324 (356)
                      |+..+..++++|+++|+++.+|..............+......+++++.++....+.....+.++++++++.+|++++.+
T Consensus       230 g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  309 (338)
T cd08295         230 GGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVE  309 (338)
T ss_pred             CHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEcee
Confidence            99999999999999999999997543211100011233556678888888766554444456788999999999999887


Q ss_pred             eeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          325 DVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ...|+++++++|++.+.+++..||+|+++
T Consensus       310 ~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         310 DIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             ecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            77899999999999999999999999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=1e-46  Score=322.66  Aligned_cols=324  Identities=21%  Similarity=0.276  Sum_probs=274.3

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCCCCCCCCCCCCCcceecE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQDPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~~~~~~p~v~G~e~~~~G   84 (356)
                      ++...|+++|..+  |.|. ..++++..++  | ....++|+||.+|+.|||+|++.++ .|+..+..|.|-|+|  |+|
T Consensus        16 ~~~~~kalvY~~h--gdP~-kVlql~~~~~--p-~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnE--Gv~   87 (354)
T KOG0025|consen   16 MPARSKALVYSEH--GDPA-KVLQLKNLEL--P-AVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNE--GVG   87 (354)
T ss_pred             cccccceeeeccc--CCch-hhheeecccC--C-CCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCc--ceE
Confidence            5566899999999  9886 5666655554  4 6667779999999999999999999 666667778999988  899


Q ss_pred             EEEEecCCCCCCCCCCEEEEc----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEE
Q 018404           85 VAKVVDSGHPEFKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYI  160 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~V  160 (356)
                      .|+.+|+++++|++||+|+..    |+|++|.+.+++. ++++ ++.+++. .||++..+.+|||.+|.+..++.+||+|
T Consensus        88 eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~-Li~v-d~~~pl~-~AAT~~VNP~TAyrmL~dfv~L~~GD~v  164 (354)
T KOG0025|consen   88 EVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESD-LIKV-DKDIPLA-SAATLSVNPCTAYRMLKDFVQLNKGDSV  164 (354)
T ss_pred             EEEEecCCcCccCCCCeEeecCCCCccceeeEeecccc-eEEc-CCcCChh-hhheeccCchHHHHHHHHHHhcCCCCee
Confidence            999999999999999999865    8999999999998 9999 7888877 6999999999999999999999999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccE
Q 018404          161 YVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDI  239 (356)
Q Consensus       161 lI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~  239 (356)
                      +.+||++++|++.+|+||++|.+-+.++|++...      +++++.++ .+|+++|+...+- .-.+..+..... .+.+
T Consensus       165 IQNganS~VG~~ViQlaka~GiktinvVRdR~~i------eel~~~Lk-~lGA~~ViTeeel-~~~~~~k~~~~~~~prL  236 (354)
T KOG0025|consen  165 IQNGANSGVGQAVIQLAKALGIKTINVVRDRPNI------EELKKQLK-SLGATEVITEEEL-RDRKMKKFKGDNPRPRL  236 (354)
T ss_pred             eecCcccHHHHHHHHHHHHhCcceEEEeecCccH------HHHHHHHH-HcCCceEecHHHh-cchhhhhhhccCCCceE
Confidence            9999999999999999999999999999886665      78888888 8999999865432 111122222223 7899


Q ss_pred             EEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc------hhhHHHHHHHHHH
Q 018404          240 YFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY------FPQYSRFLDAVLP  313 (356)
Q Consensus       240 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~  313 (356)
                      .|+|+|++......+.|.++|.++++|.++.+++.     .+...+++|++.+.||++..|      ++.+.+.+.++.+
T Consensus       237 alNcVGGksa~~iar~L~~GgtmvTYGGMSkqPv~-----~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~  311 (354)
T KOG0025|consen  237 ALNCVGGKSATEIARYLERGGTMVTYGGMSKQPVT-----VPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCD  311 (354)
T ss_pred             EEeccCchhHHHHHHHHhcCceEEEecCccCCCcc-----cccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHH
Confidence            99999999999999999999999999999987654     456668899999999999988      4455678899999


Q ss_pred             HHHcCCCccceeeeeCCCcHHHHHHHHHcCC-CcceEEEEe
Q 018404          314 YIREGKVVYVEDVADGLENAPAALVGLFSGR-NVGKQLVVV  353 (356)
Q Consensus       314 ~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~-~~gk~vv~~  353 (356)
                      +++.|+|+.+.....+|++.+.|++...+.. ..||.++.+
T Consensus       312 l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  312 LYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             HHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence            9999999988887889999999998655433 336777665

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-46  Score=327.86  Aligned_cols=317  Identities=21%  Similarity=0.240  Sum_probs=272.5

Q ss_pred             CCCcccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcce
Q 018404            2 AANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIE   81 (356)
Q Consensus         2 ~~~~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~   81 (356)
                      .....|.+.++|.+.++  +++    +..+..+++.| +++++||+|+++|+|||++|++.+.+......+|.|+|||. 
T Consensus         2 ~~~~~p~k~~g~~~~~~--~G~----l~p~~~~~~~~-~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEi-   73 (360)
T KOG0023|consen    2 SSMSIPEKQFGWAARDP--SGV----LSPEVFSFPVR-EPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEI-   73 (360)
T ss_pred             CcccCchhhEEEEEECC--CCC----CCcceeEcCCC-CCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCcee-
Confidence            33445778889999987  664    24444567777 89999999999999999999999997777788999999995 


Q ss_pred             ecEEEEEecCCCCCCCCCCEEE-Ec-------------------------------------cccceeEeecCCCcceee
Q 018404           82 GFGVAKVVDSGHPEFKKGDLVW-GT-------------------------------------TGWEEYSLIKNPQGLFKI  123 (356)
Q Consensus        82 ~~G~V~~vG~~v~~~~~Gd~V~-~~-------------------------------------g~~~~~~~v~~~~~l~~~  123 (356)
                       +|+|+++|++|++|++||+|= ++                                     |+|++|+++++.+ +++|
T Consensus        74 -aG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~-a~kI  151 (360)
T KOG0023|consen   74 -AGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVF-AIKI  151 (360)
T ss_pred             -eEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeee-EEEC
Confidence             999999999999999999992 10                                     5799999999999 9999


Q ss_pred             cCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHH
Q 018404          124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQL  203 (356)
Q Consensus       124 ~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~  203 (356)
                       |+++++. ++|.+.|++.|+|.+|.+ .++.||++|-|.| .||+|.+++|+||+||.+|++++++..+.         
T Consensus       152 -P~~~pl~-~aAPlLCaGITvYspLk~-~g~~pG~~vgI~G-lGGLGh~aVq~AKAMG~rV~vis~~~~kk---------  218 (360)
T KOG0023|consen  152 -PENLPLA-SAAPLLCAGITVYSPLKR-SGLGPGKWVGIVG-LGGLGHMAVQYAKAMGMRVTVISTSSKKK---------  218 (360)
T ss_pred             -CCCCChh-hccchhhcceEEeehhHH-cCCCCCcEEEEec-CcccchHHHHHHHHhCcEEEEEeCCchhH---------
Confidence             9998887 799999999999999965 6789999999999 56699999999999999999999998554         


Q ss_pred             HHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchH
Q 018404          204 VELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLM  283 (356)
Q Consensus       204 ~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  283 (356)
                       +++-+.+|++..++..++.++.+.+.+.+++++|-|.+. ....+..++.+|+++|++|.+|.+..      ....+..
T Consensus       219 -eea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~  290 (360)
T KOG0023|consen  219 -EEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTF  290 (360)
T ss_pred             -HHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccch
Confidence             444438999988888743488899999888777777766 44788999999999999999998654      2335667


Q ss_pred             HHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          284 NVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      .+..+.+.+.|+....     ..+.++++++...|.+++.+. ..+++++++||++|.++...+|.||+++.
T Consensus       291 ~lil~~~~I~GS~vG~-----~ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~s~  356 (360)
T KOG0023|consen  291 PLILGRKSIKGSIVGS-----RKETQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDVSK  356 (360)
T ss_pred             hhhcccEEEEeecccc-----HHHHHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence            7888999999999888     788999999999999999887 56999999999999999999999999864

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=5.5e-46  Score=327.25  Aligned_cols=310  Identities=21%  Similarity=0.251  Sum_probs=267.9

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~   87 (356)
                      +++||.+..++  ++|    |++++.+++   +|+++||+||+.++|+|++|....++..+.. +|.++|||  |+|+|+
T Consensus         1 mk~~aAV~~~~--~~P----l~i~ei~l~---~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHE--gAGiVe   68 (366)
T COG1062           1 MKTRAAVAREA--GKP----LEIEEVDLD---PPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHE--GAGIVE   68 (366)
T ss_pred             CCceEeeeecC--CCC----eEEEEEecC---CCCCCeEEEEEEEeeccccchhhhcCCCCCC-Cceecccc--cccEEE
Confidence            46788998888  899    677766666   8899999999999999999999888544444 89999999  799999


Q ss_pred             EecCCCCCCCCCCEEEEc---------------------------------------------------cccceeEeecC
Q 018404           88 VVDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYSLIKN  116 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~  116 (356)
                      ++|++|+++++||+|+..                                                   ++|++|.++++
T Consensus        69 ~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~  148 (366)
T COG1062          69 AVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHE  148 (366)
T ss_pred             EecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecc
Confidence            999999999999999643                                                   38999999999


Q ss_pred             CCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhc
Q 018404          117 PQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVW  195 (356)
Q Consensus       117 ~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~  195 (356)
                      .+ ++|+ ++..++. .++-+.|...|.+-+..+.+++++|++|.|.| .|++|++++|-|+..|+ ++|+++.+++++ 
T Consensus       149 ~s-~vki-~~~~p~~-~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl-  223 (366)
T COG1062         149 IS-LVKI-DPDAPLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKL-  223 (366)
T ss_pred             cc-eEEC-CCCCCcc-ceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHH-
Confidence            99 9999 6665665 57788999999999998999999999999999 99999999999999999 999999999999 


Q ss_pred             cccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCC
Q 018404          196 LIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLS  274 (356)
Q Consensus       196 ~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  274 (356)
                               +.++ +||+++++|.++..++.+.+.++|++|+|.+|||+|+ ..++.++.++.++|+.+.+|.....   
T Consensus       224 ---------~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~---  290 (366)
T COG1062         224 ---------ELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAG---  290 (366)
T ss_pred             ---------HHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCC---
Confidence                     9999 9999999999875358999999999999999999999 8999999999999999999975322   


Q ss_pred             CCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          275 QPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                       ...+.+..++... -++.|+.+.....  ..++..++++..+|+|.  ..+++.++|+||++||+.|.+|+.. |.||.
T Consensus       291 -~~i~~~~~~lv~g-r~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         291 -QEISTRPFQLVTG-RVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             -ceeecChHHeecc-ceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence             2233455555555 7788887765422  56899999999999987  5689999999999999999999887 55554

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=2.3e-45  Score=316.25  Aligned_cols=339  Identities=73%  Similarity=1.258  Sum_probs=305.6

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCCCCCCCCCCCCCcceecEEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQDPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~~~~~~p~v~G~e~~~~G~V   86 (356)
                      .++|+|++.++..|.|...++.+...++.++.++++++|+||.+|-+.+|..+..++ .......+|+.+|..+.|.|+-
T Consensus         2 v~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~   81 (343)
T KOG1196|consen    2 VTNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVA   81 (343)
T ss_pred             ccccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceE
Confidence            467899999998999999999998888776657899999999999999999888777 3333366789999988888888


Q ss_pred             EEecCCCCCCCCCCEEEEccccceeEeecCCC-cceeec-CCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEec
Q 018404           87 KVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQ-GLFKIH-HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSA  164 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~l~~~~-p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~g  164 (356)
                      ..+.|+.+++++||.|+++-+|.||.+++... ..++++ |.+.++++....+.++++|||.++.+.+..++|++|+|.|
T Consensus        82 kVi~S~~~~~~~GD~v~g~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSa  161 (343)
T KOG1196|consen   82 KVIDSGHPNYKKGDLVWGIVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSA  161 (343)
T ss_pred             EEEecCCCCCCcCceEEEeccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEee
Confidence            88899999999999999999999999997654 245542 4677888779999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCC
Q 018404          165 ASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV  244 (356)
Q Consensus       165 a~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~  244 (356)
                      |+|++|+.+.|+|+.+||+|++++.++++.          ..++++||.+..+||+++.+..+++++..++|+|+.||.+
T Consensus       162 AsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv----------~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV  231 (343)
T KOG1196|consen  162 ASGAVGQLVGQFAKLMGCYVVGSAGSKEKV----------DLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV  231 (343)
T ss_pred             ccchhHHHHHHHHHhcCCEEEEecCChhhh----------hhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence            999999999999999999999999999999          9999889999999999976888899998888999999999


Q ss_pred             CchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccce
Q 018404          245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVE  324 (356)
Q Consensus       245 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i  324 (356)
                      |+..+...+..|+..||++.||..+.++.+.+..-.+....+.|++++.||...++.+.+.+.++++..++++|+|+..-
T Consensus       232 GG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~e  311 (343)
T KOG1196|consen  232 GGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVE  311 (343)
T ss_pred             CcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEeh
Confidence            99999999999999999999999999988777777778889999999999999999888899999999999999999877


Q ss_pred             eeeeCCCcHHHHHHHHHcCCCcceEEEEecCC
Q 018404          325 DVADGLENAPAALVGLFSGRNVGKQLVVVSRE  356 (356)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~  356 (356)
                      +..-.|++.++||..|.+|+..||.++.+..|
T Consensus       312 di~~Glen~P~A~vglf~GkNvGKqiv~va~E  343 (343)
T KOG1196|consen  312 DIADGLENGPSALVGLFHGKNVGKQLVKVARE  343 (343)
T ss_pred             hHHHHHhccHHHHHHHhccCcccceEEEeecC
Confidence            76668999999999999999999999998754

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=2.8e-44  Score=339.18  Aligned_cols=312  Identities=19%  Similarity=0.259  Sum_probs=262.1

Q ss_pred             ccEEEEeecccCCCC----ccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404           10 NKQVILKNYVEGFPK----ETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~----~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      |||+++.++  |.|.    ++.++++  ++|.| +++++||+|||.+++||++|++.+.+.. ...+|.++|||+  +|+
T Consensus         1 mka~~~~~~--g~~~~~~~~~~l~~~--~~~~P-~~~~~evlV~v~~~gi~~~D~~~~~g~~-~~~~p~i~GhE~--~G~   72 (371)
T cd08281           1 MRAAVLRET--GAPTPYADSRPLVIE--EVELD-PPGPGEVLVKIAAAGLCHSDLSVINGDR-PRPLPMALGHEA--AGV   72 (371)
T ss_pred             CcceEEEec--ccccccccCCCceEE--EeecC-CCCCCeEEEEEEEEeeCccchHhhcCCC-CCCCCccCCccc--eeE
Confidence            789999998  6541    2455664  55666 7899999999999999999999876332 234689999996  899


Q ss_pred             EEEecCCCCCCCCCCEEEEc---------------------------------------------------cccceeEee
Q 018404           86 AKVVDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYSLI  114 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v  114 (356)
                      |+++|++++++++||+|++.                                                   |+|+||+++
T Consensus        73 V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v  152 (371)
T cd08281          73 VVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVV  152 (371)
T ss_pred             EEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEe
Confidence            99999999999999999852                                                   589999999


Q ss_pred             cCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcch
Q 018404          115 KNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREK  193 (356)
Q Consensus       115 ~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~  193 (356)
                      ++.. ++++ |+++++. +++.++++++|||+++...+.+++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++
T Consensus       153 ~~~~-~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r  228 (371)
T cd08281         153 SRRS-VVKI-DKDVPLE-IAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDK  228 (371)
T ss_pred             cccc-eEEC-CCCCChH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHH
Confidence            9998 9999 9996555 57778889999999987778899999999998 69999999999999999 69999999999


Q ss_pred             hccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccC
Q 018404          194 VWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYN  272 (356)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~  272 (356)
                      +          +.++ ++|+++++++.+. ++.+.+++.+++++|++|||+|+ ..+..++++++++|+++.+|..... 
T Consensus       229 ~----------~~a~-~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-  295 (371)
T cd08281         229 L----------ALAR-ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE-  295 (371)
T ss_pred             H----------HHHH-HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC-
Confidence            8          8888 9999999998776 78888888877689999999997 7889999999999999999975321 


Q ss_pred             CCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEE
Q 018404          273 LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQL  350 (356)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~v  350 (356)
                         .....+...++.+++++.+++...+..  .++++++++++.+|++++  .+++.|+|+++++||+.+.+++..+|+|
T Consensus       296 ---~~~~~~~~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi  370 (371)
T cd08281         296 ---ARLSVPALSLVAEERTLKGSYMGSCVP--RRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI  370 (371)
T ss_pred             ---ceeeecHHHHhhcCCEEEEEecCCCCh--HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence               112345567788999999987655421  456888999999999974  5788999999999999999998887766


Q ss_pred             E
Q 018404          351 V  351 (356)
Q Consensus       351 v  351 (356)
                      +
T Consensus       371 ~  371 (371)
T cd08281         371 L  371 (371)
T ss_pred             C
Confidence            3

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.5e-44  Score=314.10  Aligned_cols=308  Identities=20%  Similarity=0.227  Sum_probs=260.9

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCC---CCCCCCCCcceecE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPD---FSSFTPGSPIEGFG   84 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~---~~p~v~G~e~~~~G   84 (356)
                      .+|+|+++.+.  +.     +.+  .+.|.|..++|+||+|++.++|||.||++.+.......   ..|.++|||.  +|
T Consensus         3 ~~~~A~vl~g~--~d-----i~i--~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEs--sG   71 (354)
T KOG0024|consen    3 ADNLALVLRGK--GD-----IRI--EQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHES--SG   71 (354)
T ss_pred             cccceeEEEcc--Cc-----eeE--eeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCcccccccccccccc--cc
Confidence            46899999875  22     345  47788844599999999999999999999888443333   3799999996  89


Q ss_pred             EEEEecCCCCCCCCCCEEEEc-------------------------------cccceeEeecCCCcceeecCCCCCccch
Q 018404           85 VAKVVDSGHPEFKKGDLVWGT-------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYY  133 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~  133 (356)
                      +|.++|+.|+++++||||..-                               |++++|++.+++. ++|+ |+++  +++
T Consensus        72 iV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~df-c~KL-Pd~v--s~e  147 (354)
T KOG0024|consen   72 IVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADF-CYKL-PDNV--SFE  147 (354)
T ss_pred             chhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHh-eeeC-CCCC--chh
Confidence            999999999999999999632                               7899999999999 9999 9994  547


Q ss_pred             hcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          134 TGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       134 ~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      .++|..+++++||+. +++++++|++|||+| +|++|+.+...||.+|| +|++++-.+.|+          +.++ +||
T Consensus       148 eGAl~ePLsV~~HAc-r~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rl----------e~Ak-~~G  214 (354)
T KOG0024|consen  148 EGALIEPLSVGVHAC-RRAGVKKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRL----------ELAK-KFG  214 (354)
T ss_pred             hcccccchhhhhhhh-hhcCcccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHH----------HHHH-HhC
Confidence            888999999999999 469999999999999 89999999999999999 999999999999          9999 899


Q ss_pred             CCEEEecCCc---ccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHh
Q 018404          213 FDDAFNYKEE---NDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVY  287 (356)
Q Consensus       213 ~~~vv~~~~~---~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  287 (356)
                      ++.+.+....   .++.+.+++..++ .+|+.|||+|. ..++.++..++.+|++++.|.-..      ....+......
T Consensus       215 a~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~------~~~fpi~~v~~  288 (354)
T KOG0024|consen  215 ATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAE------EIQFPIIDVAL  288 (354)
T ss_pred             CeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCC------ccccChhhhhh
Confidence            9887766553   1345556665554 79999999999 789999999999999999987432      33466777889


Q ss_pred             hcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcc-eEEEEec
Q 018404          288 KRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVG-KQLVVVS  354 (356)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~g-k~vv~~~  354 (356)
                      |++.+.|.+.+.     +.++..+++++++|++.  +.|++.|+++++.+||+.+.++.... |+++..+
T Consensus       289 kE~~~~g~fry~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~  353 (354)
T KOG0024|consen  289 KEVDLRGSFRYC-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP  353 (354)
T ss_pred             heeeeeeeeeec-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence            999999988776     66899999999999886  67999999999999999998877543 8888764

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=3e-43  Score=330.68  Aligned_cols=309  Identities=19%  Similarity=0.221  Sum_probs=258.4

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      +|||+++.++  |.|    +.++  ++|.| +++++||+|||.++++|++|++...+.. ...+|.++|||+  +|+|++
T Consensus         1 ~mka~~~~~~--~~~----~~~~--~~~~p-~~~~~evlV~v~~~gi~~~D~~~~~g~~-~~~~p~i~G~e~--~G~V~~   68 (358)
T TIGR03451         1 TVRGVIARSK--GAP----VELE--TIVVP-DPGPGEVIVDIQACGVCHTDLHYREGGI-NDEFPFLLGHEA--AGVVEA   68 (358)
T ss_pred             CcEEEEEccC--CCC----CEEE--EEECC-CCCCCeEEEEEEEEeecHHHHHHhcCCc-cccCCcccccce--EEEEEE
Confidence            5899999998  766    4564  56666 7899999999999999999998776322 234688999995  899999


Q ss_pred             ecCCCCCCCCCCEEEE-------------------------------------------ccccceeEeecCCCcceeecC
Q 018404           89 VDSGHPEFKKGDLVWG-------------------------------------------TTGWEEYSLIKNPQGLFKIHH  125 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~-------------------------------------------~g~~~~~~~v~~~~~l~~~~p  125 (356)
                      +|+++++|++||+|++                                           .|+|+||+++++.. ++++ |
T Consensus        69 vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~-~~~i-p  146 (358)
T TIGR03451        69 VGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQ-CTKV-D  146 (358)
T ss_pred             eCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhh-eEEC-C
Confidence            9999999999999975                                           27899999999998 9999 8


Q ss_pred             CCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHH
Q 018404          126 TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLV  204 (356)
Q Consensus       126 ~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~  204 (356)
                      ++++.. +++.+++.+.+||+++...+.+++|++|||+| +|++|++++|+|+.+|+ +|++++++++++          
T Consensus       147 ~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~----------  214 (358)
T TIGR03451       147 PAADPA-AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKL----------  214 (358)
T ss_pred             CCCChh-HhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH----------
Confidence            986554 57778889999999887778899999999998 69999999999999999 599999999998          


Q ss_pred             HHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccch
Q 018404          205 ELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNL  282 (356)
Q Consensus       205 ~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  282 (356)
                      +.++ ++|+++++++.+. ++.+.+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....    .....+.
T Consensus       215 ~~~~-~~Ga~~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~  288 (358)
T TIGR03451       215 EWAR-EFGATHTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPL  288 (358)
T ss_pred             HHHH-HcCCceEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccH
Confidence            8888 9999999998776 788888888877 89999999998 6889999999999999999975321    1122445


Q ss_pred             HHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          283 MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ..++.+++++.+++.....  ..+.++++++++++|++++  .++++|+++++++|++.+.+++.. |+++.
T Consensus       289 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       289 LDVFGRGGALKSSWYGDCL--PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HHHhhcCCEEEEeecCCCC--cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            5677888888877543221  1467889999999999975  588999999999999999888765 77764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=7.6e-43  Score=326.38  Aligned_cols=327  Identities=37%  Similarity=0.618  Sum_probs=256.7

Q ss_pred             cccEEEEeecc--cCCCCccceEEEEeecccccCC-CCCeEEEEEEEeecCHHhhhhhccC---CCCCCCCCCCCCccee
Q 018404            9 SNKQVILKNYV--EGFPKETDMLVKASSISLKVEE-GSNAILVKNLYLSCDPYMRARMSFN---QDPDFSSFTPGSPIEG   82 (356)
Q Consensus         9 ~~~a~~~~~~~--~g~p~~~~l~~~~~~~~~p~~~-~~~evlV~v~~~~i~~~d~~~~~~~---~~~~~~p~v~G~e~~~   82 (356)
                      -.|.+++.+.+  .|.|.++.+++.  +.|.| ++ +++||+|||.++||||.|++.....   .....+|.++|||+  
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p-~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~--   76 (345)
T cd08293           2 INKRVVLNSRPGKNGNPVAENFRVE--ECTLP-DELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDG--   76 (345)
T ss_pred             cceEEEEecccCCCCCCCccceEEE--eccCC-CCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEe--
Confidence            35778888765  567777777775  55555 55 5999999999999999997544311   11234578999985  


Q ss_pred             cEEEEEecCCCCCCCCCCEEEEc-cccceeEeecCCCcceeecCCCCCc---cchhcccCcchHHHHHHHHHHcCCCCC-
Q 018404           83 FGVAKVVDSGHPEFKKGDLVWGT-TGWEEYSLIKNPQGLFKIHHTDVPL---SYYTGILGMPGMTAWAGFYEICAPKKG-  157 (356)
Q Consensus        83 ~G~V~~vG~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~l~~~~p~~~~~---~~~~a~l~~~~~tA~~~l~~~~~~~~g-  157 (356)
                      +|+|+++|+++++|++||+|+++ ++|+||++++++. ++++ |++++.   +..+++++.+++|||+++.+.+++++| 
T Consensus        77 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~-~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~  154 (345)
T cd08293          77 GGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSS-LEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGA  154 (345)
T ss_pred             eEEEEEeccCCCCCCCCCEEEecCCCceeEEEecHHH-eEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCC
Confidence            89999999999999999999988 5899999999998 9999 887432   212457788999999999877888877 


Q ss_pred             -CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          158 -EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 -~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                       ++|||+|++|++|++++|+|+.+|+ +|+++++++++.          +.+++++|+++++++.+. ++.+.+++.+++
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~----------~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~  223 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKC----------QLLKSELGFDAAINYKTD-NVAERLRELCPE  223 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHH----------HHHHHhcCCcEEEECCCC-CHHHHHHHHCCC
Confidence             9999999999999999999999999 899999999988          888734999999998876 888888888766


Q ss_pred             CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCc-cccc--hHH-HHhhcceeeceeeecchhhHHHHHHHH
Q 018404          236 GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPE-GVHN--LMN-VVYKRIRMEGFVVFDYFPQYSRFLDAV  311 (356)
Q Consensus       236 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~  311 (356)
                      ++|++|||+|+..+..++++|+++|+++.+|..+........ ....  ... ...+++++..+....+.....+.++++
T Consensus       224 gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (345)
T cd08293         224 GVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQL  303 (345)
T ss_pred             CceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHH
Confidence            899999999998889999999999999999864321100000 0010  111 223455554444333333445678889


Q ss_pred             HHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          312 LPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       312 ~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++++++|.+++.+...++++++++|++.+.+++..||+|+++
T Consensus       304 ~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         304 SQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            999999999987666779999999999999998899999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1e-42  Score=323.22  Aligned_cols=320  Identities=41%  Similarity=0.742  Sum_probs=259.9

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      .||+|++.++..|.+.++.++++  ++|.| +|+++||+|||.+++|||.|++....   ...+|.++|+|+  +|+|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~--~~~~p-~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~--~G~V~~   73 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELV--EEELP-PLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQV--AKVIES   73 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEE--ecCCC-CCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceE--EEEEec
Confidence            58999999842344544556664  56666 88999999999999999988753221   124578999885  889884


Q ss_pred             ecCCCCCCCCCCEEEEccccceeEeecCC---CcceeecCCCCC--cc--chhcccCcchHHHHHHHHHHcCCCCCCEEE
Q 018404           89 VDSGHPEFKKGDLVWGTTGWEEYSLIKNP---QGLFKIHHTDVP--LS--YYTGILGMPGMTAWAGFYEICAPKKGEYIY  161 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~---~~l~~~~p~~~~--~~--~~~a~l~~~~~tA~~~l~~~~~~~~g~~Vl  161 (356)
                         .+++|++||+|+++++|++|++++.+   . ++++ |++++  +.  ...++++++++|||+++.+.+++++|++||
T Consensus        74 ---~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vl  148 (329)
T cd08294          74 ---KNSKFPVGTIVVASFGWRTHTVSDGKDQPD-LYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVV  148 (329)
T ss_pred             ---CCCCCCCCCEEEeeCCeeeEEEECCccccc-eEEC-CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEE
Confidence               45679999999999999999999999   8 9999 99865  11  124578899999999998888999999999


Q ss_pred             EecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEE
Q 018404          162 VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYF  241 (356)
Q Consensus       162 I~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vi  241 (356)
                      |+||+|++|.+++|+|+.+|++|+++++++++.          +.++ ++|+++++++.+. ++.+.+++.+++++|++|
T Consensus       149 I~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~----------~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vl  216 (329)
T cd08294         149 VNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV----------AWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYF  216 (329)
T ss_pred             EecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEE
Confidence            999999999999999999999999999999998          9998 8999999999876 888888888766899999


Q ss_pred             eCCCchHHHHHHHhhccCCeEEEEccccccCCCCCc-cccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCC
Q 018404          242 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPE-GVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKV  320 (356)
Q Consensus       242 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l  320 (356)
                      |++|++.+..++++++++|+++.+|........... .......+..+++++.++....+.....+.++++++++++|++
T Consensus       217 d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i  296 (329)
T cd08294         217 DNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKL  296 (329)
T ss_pred             ECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCC
Confidence            999999999999999999999999864332111010 1223445677888888776544333445678899999999999


Q ss_pred             ccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          321 VYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       321 ~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++.+...++++++++|++.+.+++..||+|+++
T Consensus       297 ~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         297 KYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             cCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            987667789999999999999999999999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=6.7e-43  Score=323.99  Aligned_cols=313  Identities=20%  Similarity=0.248  Sum_probs=258.4

Q ss_pred             ccEEEEeecccCCCC-ccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEE
Q 018404           10 NKQVILKNYVEGFPK-ETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~-~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~   87 (356)
                      |||+++.++  |.|. ..  .++..++|.| .++++||+||+.++++|++|++...+. .....+|.++|||+  +|+|+
T Consensus         1 m~a~~~~~~--~~~~~~~--~~~~~~~~~p-~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~--~G~V~   73 (324)
T cd08291           1 MKALLLEEY--GKPLEVK--ELSLPEPEVP-EPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEG--SGTVV   73 (324)
T ss_pred             CeEEEEeec--CCCcccc--EEEecccCCC-CCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcce--EEEEE
Confidence            689999987  7651 01  3444567777 789999999999999999999877632 22234678999995  89999


Q ss_pred             EecCCCCC-CCCCCEEEEc----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEE
Q 018404           88 VVDSGHPE-FKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYV  162 (356)
Q Consensus        88 ~vG~~v~~-~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI  162 (356)
                      ++|+++.+ |++||+|+++    |+|+||++++++. ++++ |+++++. ++++++..+.|||.++ ....+ ++++++|
T Consensus        74 ~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv  148 (324)
T cd08291          74 AAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQ-CLPL-PDGVSFE-QGASSFVNPLTALGML-ETARE-EGAKAVV  148 (324)
T ss_pred             EECCCccccCCCCCEEEecCCCCCcchheeeecHHH-eEEC-CCCCCHH-HHhhhcccHHHHHHHH-Hhhcc-CCCcEEE
Confidence            99999996 9999999986    8999999999998 9999 9996554 5777888899998665 44555 4556666


Q ss_pred             e-cCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEE
Q 018404          163 S-AASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIY  240 (356)
Q Consensus       163 ~-ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~v  240 (356)
                      + +|+|++|++++|+|+.+|++|+++++++++.          +.++ ++|+++++++.+. ++.+.+++.+++ ++|++
T Consensus       149 ~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~----------~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~v  216 (324)
T cd08291         149 HTAAASALGRMLVRLCKADGIKVINIVRRKEQV----------DLLK-KIGAEYVLNSSDP-DFLEDLKELIAKLNATIF  216 (324)
T ss_pred             EccCccHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEE
Confidence            5 8899999999999999999999999999998          8898 8999999998876 888889888877 99999


Q ss_pred             EeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecch-hhHHHHHHHHHHHHHcCC
Q 018404          241 FEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYF-PQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       241 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~g~  319 (356)
                      |||+|+.....++++++++|+++.+|..+..+.    ...+....+.+++++.++....+. ....+.+++++++++ |.
T Consensus       217 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  291 (324)
T cd08291         217 FDAVGGGLTGQILLAMPYGSTLYVYGYLSGKLD----EPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TE  291 (324)
T ss_pred             EECCCcHHHHHHHHhhCCCCEEEEEEecCCCCc----ccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cc
Confidence            999999888889999999999999997543211    113345667889999888776542 223567888999998 99


Q ss_pred             CccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          320 VVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       320 l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      +++.++++|+|+++++||+.+.+++..||+++
T Consensus       292 ~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~  323 (324)
T cd08291         292 LKTTFASRYPLALTLEAIAFYSKNMSTGKKLL  323 (324)
T ss_pred             cccceeeEEcHHHHHHHHHHHHhCCCCCeEEe
Confidence            99999999999999999999999999999987

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=8.6e-43  Score=325.29  Aligned_cols=302  Identities=20%  Similarity=0.255  Sum_probs=251.8

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++.++  +     .+++  .++|.| .++++||+||+.++++|++|++.+... .....+|.++|||+  +|+|++
T Consensus         1 mka~~~~~~--~-----~l~~--~~~~~p-~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~--~G~V~~   68 (339)
T cd08239           1 MRGAVFPGD--R-----TVEL--REFPVP-VPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEP--AGVVVA   68 (339)
T ss_pred             CeEEEEecC--C-----ceEE--EecCCC-CCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCc--eEEEEE
Confidence            689998753  2     2455  566777 789999999999999999999876522 22234579999995  899999


Q ss_pred             ecCCCCCCCCCCEEEEc-------------------------------cccceeEeecCCCcceeecCCCCCccchhccc
Q 018404           89 VDSGHPEFKKGDLVWGT-------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGIL  137 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l  137 (356)
                      +|++++++++||+|+..                               |+|+||++++... ++++ |++++.. +++.+
T Consensus        69 vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~-~~~~-P~~~~~~-~aa~l  145 (339)
T cd08239          69 VGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKT-LIPL-PDDLSFA-DGALL  145 (339)
T ss_pred             ECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHH-eEEC-CCCCCHH-Hhhhh
Confidence            99999999999999752                               7899999999998 9999 9996554 57788


Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          138 GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       138 ~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      ++++.|||+++. ...+++|++|+|+| +|++|++++|+|+.+|++ |+++++++++.          +.++ ++|++.+
T Consensus       146 ~~~~~ta~~~l~-~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~----------~~~~-~~ga~~~  212 (339)
T cd08239         146 LCGIGTAYHALR-RVGVSGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERL----------ELAK-ALGADFV  212 (339)
T ss_pred             cchHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHH----------HHHH-HhCCCEE
Confidence            899999999995 47789999999998 699999999999999998 99999998988          8888 9999999


Q ss_pred             EecCCcccHHHHHHHhCCC-CccEEEeCCCch-HHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeec
Q 018404          217 FNYKEENDLDAALKRCFPE-GIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEG  294 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (356)
                      +++++. + .+.+.+.+++ ++|++|||+|+. .+..++++|+++|+++.+|......     . .....++.+++++.+
T Consensus       213 i~~~~~-~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~-~~~~~~~~~~~~i~g  284 (339)
T cd08239         213 INSGQD-D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELT-----I-EVSNDLIRKQRTLIG  284 (339)
T ss_pred             EcCCcc-h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcc-----c-CcHHHHHhCCCEEEE
Confidence            998775 5 6677777776 899999999995 5688999999999999999754321     1 123456778999988


Q ss_pred             eeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          295 FVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       295 ~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++...     .++++++++++.+|+++  +.++++|+++++++||+.+.++. .||+|+.|
T Consensus       285 ~~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         285 SWYFS-----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             EecCC-----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            77654     56789999999999987  46888999999999999988875 69999875

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.4e-42  Score=328.56  Aligned_cols=316  Identities=20%  Similarity=0.237  Sum_probs=257.6

Q ss_pred             CcccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC-CCCCCCCCCCCccee
Q 018404            4 NSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ-DPDFSSFTPGSPIEG   82 (356)
Q Consensus         4 ~~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~-~~~~~p~v~G~e~~~   82 (356)
                      ++.|.+|||+++.++  +++    +.++  ++|.| +++++||+|||.++|||++|++.+.+.. ....+|.++|||+  
T Consensus         5 ~~~~~~mka~~~~~~--~~~----~~~~--e~~~P-~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~--   73 (381)
T PLN02740          5 QGKVITCKAAVAWGP--GEP----LVME--EIRVD-PPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEA--   73 (381)
T ss_pred             cccceeeEEEEEecC--CCC----cEEE--EeeCC-CCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccc--
Confidence            446788999999886  544    4554  56666 7899999999999999999998876322 2334689999996  


Q ss_pred             cEEEEEecCCCCCCCCCCEEEE------------------------------------------------------cccc
Q 018404           83 FGVAKVVDSGHPEFKKGDLVWG------------------------------------------------------TTGW  108 (356)
Q Consensus        83 ~G~V~~vG~~v~~~~~Gd~V~~------------------------------------------------------~g~~  108 (356)
                      +|+|+++|++++++++||+|++                                                      .|+|
T Consensus        74 ~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~  153 (381)
T PLN02740         74 AGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTF  153 (381)
T ss_pred             eEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccc
Confidence            8999999999999999999985                                                      2689


Q ss_pred             ceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 018404          109 EEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGS  187 (356)
Q Consensus       109 ~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~  187 (356)
                      +||++++.+. ++++ |++++.. +++.+++++.|||+++...+++++|++|+|+| +|++|++++|+|+.+|+ +|+++
T Consensus       154 aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~G~~~Vi~~  229 (381)
T PLN02740        154 TEYTVLDSAC-VVKI-DPNAPLK-KMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARARGASKIIGV  229 (381)
T ss_pred             eeEEEEehHH-eEEC-CCCCCHH-HhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCcEEEE
Confidence            9999999998 9999 9986554 57778889999999987778999999999998 69999999999999999 69999


Q ss_pred             eCCcchhccccchhHHHHHHHhhcCCCEEEecCCc-ccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEE
Q 018404          188 AGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE-NDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAA  264 (356)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~  264 (356)
                      +++++++          +.++ ++|++.++|+.+. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.
T Consensus       230 ~~~~~r~----------~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~  298 (381)
T PLN02740        230 DINPEKF----------EKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVL  298 (381)
T ss_pred             cCChHHH----------HHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEE
Confidence            9999998          8898 9999999987753 147778888776689999999998 7889999999997 99999


Q ss_pred             EccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHc
Q 018404          265 CGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFS  342 (356)
Q Consensus       265 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~  342 (356)
                      +|.....    .........+ .+++++.|+....+..  ...+.++++++.+|.+++  .++++|+|+|+++|++.+.+
T Consensus       299 ~G~~~~~----~~~~~~~~~~-~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~  371 (381)
T PLN02740        299 LGIHPTP----KMLPLHPMEL-FDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLED  371 (381)
T ss_pred             EccCCCC----ceecccHHHH-hcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHC
Confidence            9975321    0111222223 3678888876654322  356889999999998864  58899999999999999988


Q ss_pred             CCCcceEEEEe
Q 018404          343 GRNVGKQLVVV  353 (356)
Q Consensus       343 ~~~~gk~vv~~  353 (356)
                      ++. .|++++.
T Consensus       372 ~~~-~k~~~~~  381 (381)
T PLN02740        372 GKA-LRCLLHL  381 (381)
T ss_pred             CCc-eeEEEeC
Confidence            765 4888863

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=2.2e-42  Score=320.70  Aligned_cols=318  Identities=41%  Similarity=0.707  Sum_probs=256.8

Q ss_pred             cEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEec
Q 018404           11 KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVD   90 (356)
Q Consensus        11 ~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~vG   90 (356)
                      |.|++.+.+.+.|.++.+++.  ++|.| +|++|||+|||.++++||.++....   .....|.++|+|+  +|+|.++|
T Consensus         2 ~~~~~~~~~~~~~~~~~l~~~--~~~~p-~~~~~evlv~v~a~~~n~~~~~g~~---~~~~~~~i~G~~~--~g~v~~~~   73 (325)
T TIGR02825         2 KTWTLKKHFVGYPTDSDFELK--TVELP-PLNNGEVLLEALFLSVDPYMRVAAK---RLKEGDTMMGQQV--ARVVESKN   73 (325)
T ss_pred             cEEEEecCCCCCCCCCceEEE--eccCC-CCCCCcEEEEEEEEecCHHHhcccC---cCCCCCcEecceE--EEEEEeCC
Confidence            678888888888888888775  46666 7899999999999999998765432   1223468999885  89999987


Q ss_pred             CCCCCCCCCCEEEEccccceeEeecCCCcceeec---CCCCCccchh-cccCcchHHHHHHHHHHcCCCCCCEEEEecCC
Q 018404           91 SGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIH---HTDVPLSYYT-GILGMPGMTAWAGFYEICAPKKGEYIYVSAAS  166 (356)
Q Consensus        91 ~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~l~~~~---p~~~~~~~~~-a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~  166 (356)
                      +   +|++||+|+++++|++|++++.+. +++++   |+++++. ++ +++++++.|||+++.+.+++++|++|||+|++
T Consensus        74 ~---~~~~GdrV~~~~~~~~~~~~~~~~-~~~l~~~~p~~~~~~-~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~  148 (325)
T TIGR02825        74 V---ALPKGTIVLASPGWTSHSISDGKD-LEKLLTEWPDTLPLS-LALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAA  148 (325)
T ss_pred             C---CCCCCCEEEEecCceeeEEechhh-eEEccccccCCCCHH-HHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCc
Confidence            4   599999999999999999999887 66551   5664443 44 67899999999999888999999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc
Q 018404          167 GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       167 g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~  246 (356)
                      |++|++++|+||.+|++|+++++++++.          +.++ ++|++.++++++.+.+.+.++..+++++|++|||+|+
T Consensus       149 g~vG~~aiqlAk~~G~~Vi~~~~s~~~~----------~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~  217 (325)
T TIGR02825       149 GAVGSVVGQIAKLKGCKVVGAAGSDEKV----------AYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGG  217 (325)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCH
Confidence            9999999999999999999999999998          8898 8999999998763256666666665589999999999


Q ss_pred             hHHHHHHHhhccCCeEEEEccccccCCCCC-ccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHHHHHcCCCccce
Q 018404          247 KMLDAVLLNMRLHGRIAACGMISQYNLSQP-EGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLPYIREGKVVYVE  324 (356)
Q Consensus       247 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~g~l~~~i  324 (356)
                      ..+..++++++++|+++.+|.......... ...........+++++.++....+ .....+.++++++++++|++++.+
T Consensus       218 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  297 (325)
T TIGR02825       218 EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKE  297 (325)
T ss_pred             HHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccce
Confidence            888999999999999999997543211000 111123455667888887765443 223356789999999999999887


Q ss_pred             eeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          325 DVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ...|+++++++|++.+.+++..||+|+.
T Consensus       298 ~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       298 YVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             eccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            7789999999999999999999999873

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.7e-43  Score=302.84  Aligned_cols=313  Identities=19%  Similarity=0.223  Sum_probs=270.2

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      .+-++||.+..++  ++|    |.+++.+++   ||+.+||+||+.++++|++|...+++......+|.|+|||  ++|+
T Consensus         4 kvI~CKAAV~w~a--~~P----L~IEei~V~---pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHE--aaGI   72 (375)
T KOG0022|consen    4 KVITCKAAVAWEA--GKP----LVIEEIEVA---PPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHE--AAGI   72 (375)
T ss_pred             CceEEeEeeeccC--CCC----eeEEEEEeC---CCCCceEEEEEEEEeeccccceeecCCCccccCceEeccc--ceeE
Confidence            4568999999998  999    677666665   8899999999999999999999988555677889999999  5999


Q ss_pred             EEEecCCCCCCCCCCEEEEc--------------------------------------------------c--ccceeEe
Q 018404           86 AKVVDSGHPEFKKGDLVWGT--------------------------------------------------T--GWEEYSL  113 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~--------------------------------------------------g--~~~~~~~  113 (356)
                      |+.+|++|+++++||+|+.+                                                  |  +|+||.+
T Consensus        73 VESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTV  152 (375)
T KOG0022|consen   73 VESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTV  152 (375)
T ss_pred             EEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEE
Confidence            99999999999999999754                                                  2  8899999


Q ss_pred             ecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcc
Q 018404          114 IKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSRE  192 (356)
Q Consensus       114 v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~  192 (356)
                      ++..+ +.+| ++..|++ .++-|.+...|.|.+..+.+++++|+++.|+| .|++|+++++-||..|| ++|+++-+++
T Consensus       153 v~~~~-v~kI-d~~aPl~-kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~  228 (375)
T KOG0022|consen  153 VDDIS-VAKI-DPSAPLE-KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPD  228 (375)
T ss_pred             eecce-eEec-CCCCChh-heeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHH
Confidence            99999 9999 6777777 68889999999999998999999999999999 99999999999999999 9999999999


Q ss_pred             hhccccchhHHHHHHHhhcCCCEEEecCCcc-cHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEEcccc
Q 018404          193 KVWLIPMQSQLVELLKNKFGFDDAFNYKEEN-DLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAACGMIS  269 (356)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~  269 (356)
                      +.          +.++ +||+++.+|..+.. ...+.+.+.|++|+|.-|||+|+ +.+.+++.+...+ |+-+.+|...
T Consensus       229 Kf----------~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~  297 (375)
T KOG0022|consen  229 KF----------EKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAA  297 (375)
T ss_pred             HH----------HHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecC
Confidence            99          9999 99999999987522 48889999999999999999999 8999999999998 9999999743


Q ss_pred             ccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcc
Q 018404          270 QYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVG  347 (356)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~g  347 (356)
                      ..    ...+..++.++. +-++.|..+..|..  .+++..+++...++++.  ..|++.+||+++++||+.|.+|+.. 
T Consensus       298 ~~----~~i~~~p~~l~~-GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-  369 (375)
T KOG0022|consen  298 AG----QEISTRPFQLVT-GRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-  369 (375)
T ss_pred             CC----cccccchhhhcc-ccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-
Confidence            32    223344555554 56677777766633  67888899888888776  5699999999999999999999887 


Q ss_pred             eEEEE
Q 018404          348 KQLVV  352 (356)
Q Consensus       348 k~vv~  352 (356)
                      |.|+.
T Consensus       370 R~vl~  374 (375)
T KOG0022|consen  370 RCVLW  374 (375)
T ss_pred             EEEEe
Confidence            66654

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=5.5e-42  Score=323.77  Aligned_cols=312  Identities=18%  Similarity=0.226  Sum_probs=256.3

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      ....|||+++.++  ++    .+.+  .++|.| +++++||+|||.++|||++|++.+.+.   ..+|.++|||+  +|+
T Consensus         9 ~~~~mka~~~~~~--~~----~~~~--~e~~~P-~~~~~eVlVkv~~~gic~sD~~~~~g~---~~~p~i~GhE~--~G~   74 (378)
T PLN02827          9 NVITCRAAVAWGA--GE----ALVM--EEVEVS-PPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPRIFGHEA--SGI   74 (378)
T ss_pred             ccceeEEEEEecC--CC----CceE--EEeecC-CCCCCEEEEEEEEEecChhHHHHhcCC---CCCCeeecccc--eEE
Confidence            3457999999775  32    2455  456666 789999999999999999999876532   24678999995  899


Q ss_pred             EEEecCCCCCCCCCCEEEEc---------------------------------------------------cccceeEee
Q 018404           86 AKVVDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYSLI  114 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v  114 (356)
                      |+++|+++++|++||+|++.                                                   |+|+||+.+
T Consensus        75 V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v  154 (378)
T PLN02827         75 VESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVV  154 (378)
T ss_pred             EEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEe
Confidence            99999999999999999863                                                   689999999


Q ss_pred             cCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcch
Q 018404          115 KNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREK  193 (356)
Q Consensus       115 ~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~  193 (356)
                      ++.. ++++ |++++.. +++.+++.+.++|+++...+++++|++|+|+| +|++|++++|+|+.+|+ .|+++++++++
T Consensus       155 ~~~~-~~~i-P~~l~~~-~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~  230 (378)
T PLN02827        155 HSGC-AVKV-DPLAPLH-KICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGVDINPEK  230 (378)
T ss_pred             chhh-eEEC-CCCCCHH-HhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHH
Confidence            9998 9999 9996554 57778888899998876678899999999998 69999999999999999 57888888888


Q ss_pred             hccccchhHHHHHHHhhcCCCEEEecCCc-ccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEEccccc
Q 018404          194 VWLIPMQSQLVELLKNKFGFDDAFNYKEE-NDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAACGMISQ  270 (356)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~  270 (356)
                      .          +.++ ++|+++++++.+. .++.+.+++.+++++|++|||+|. ..+..+++.++++ |+++.+|....
T Consensus       231 ~----------~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~  299 (378)
T PLN02827        231 A----------EKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA  299 (378)
T ss_pred             H----------HHHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC
Confidence            8          8888 9999999987651 256777888776689999999998 5789999999998 99999997532


Q ss_pred             cCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcce
Q 018404          271 YNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGK  348 (356)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk  348 (356)
                      .     ........++.+++++.|+....+..  ..+++++++++++|++++  .++++|+|+++++|++.+.+++. +|
T Consensus       300 ~-----~~~~~~~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k  371 (378)
T PLN02827        300 K-----PEVSAHYGLFLSGRTLKGSLFGGWKP--KSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LR  371 (378)
T ss_pred             C-----ccccccHHHHhcCceEEeeecCCCch--hhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eE
Confidence            1     01111235677899999887654321  456888999999999997  78999999999999999998876 69


Q ss_pred             EEEEec
Q 018404          349 QLVVVS  354 (356)
Q Consensus       349 ~vv~~~  354 (356)
                      +||.+.
T Consensus       372 ~vi~~~  377 (378)
T PLN02827        372 CVIHMP  377 (378)
T ss_pred             EEEEec
Confidence            999875

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=5.7e-42  Score=321.76  Aligned_cols=290  Identities=17%  Similarity=0.210  Sum_probs=237.8

Q ss_pred             EEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEE-----
Q 018404           30 VKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWG-----  104 (356)
Q Consensus        30 ~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~-----  104 (356)
                      ++..+++.| +++++||+|||.++|||++|++.+.+......+|.++|||+  +|+|+++|+++++|++||+|+.     
T Consensus        25 l~~~~~~~p-~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~--~G~V~~vG~~v~~~~vGdrV~~~~~~~  101 (360)
T PLN02586         25 LSPFHFSRR-ENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEI--VGIVTKLGKNVKKFKEGDRVGVGVIVG  101 (360)
T ss_pred             ceEEeecCC-CCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcce--eEEEEEECCCCCccCCCCEEEEccccC
Confidence            334566667 78999999999999999999988763222335689999996  8999999999999999999973     


Q ss_pred             ---------------------------------ccccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHH
Q 018404          105 ---------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI  151 (356)
Q Consensus       105 ---------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~  151 (356)
                                                       .|+|+||++++++. ++++ |+++++. +++++++.+.|||+++...
T Consensus       102 ~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~ls~~-~aa~l~~~~~ta~~al~~~  178 (360)
T PLN02586        102 SCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHF-VLRF-PDNLPLD-AGAPLLCAGITVYSPMKYY  178 (360)
T ss_pred             cCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHH-eeeC-CCCCCHH-HhhhhhcchHHHHHHHHHh
Confidence                                             27899999999998 9999 9996665 5788999999999999766


Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR  231 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  231 (356)
                      ..+++|++|+|.| +|++|++++|+|+.+|++|++++.+.++..         +.++ ++|+++++++.+.    +.+++
T Consensus       179 ~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~---------~~~~-~~Ga~~vi~~~~~----~~~~~  243 (360)
T PLN02586        179 GMTEPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKED---------EAIN-RLGADSFLVSTDP----EKMKA  243 (360)
T ss_pred             cccCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhh---------hHHH-hCCCcEEEcCCCH----HHHHh
Confidence            6678999999987 699999999999999999998887776640         4445 8999989886542    24555


Q ss_pred             hCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHH
Q 018404          232 CFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDA  310 (356)
Q Consensus       232 ~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  310 (356)
                      .++ ++|++||++|+ ..+..++++++++|+++.+|.....      ...+...++.++..+.++....     ..++++
T Consensus       244 ~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~------~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~  311 (360)
T PLN02586        244 AIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKP------LELPIFPLVLGRKLVGGSDIGG-----IKETQE  311 (360)
T ss_pred             hcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCC------CccCHHHHHhCCeEEEEcCcCC-----HHHHHH
Confidence            444 69999999998 6789999999999999999864321      1234555666777777766544     457899


Q ss_pred             HHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          311 VLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       311 ~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +++++.+|++++.+ ++|+|+|+++||+.+.+++..||+|+.+
T Consensus       312 ~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        312 MLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             HHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            99999999999877 4799999999999999998889999986

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=1.1e-41  Score=321.45  Aligned_cols=309  Identities=18%  Similarity=0.214  Sum_probs=253.8

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      +|||+++.++  +++    ++++  ++|.| +++++||+|||.+++||++|++.+.+......+|.++|||+  +|+|++
T Consensus         2 ~~ka~~~~~~--~~~----~~l~--~~~~p-~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~--~G~V~~   70 (369)
T cd08301           2 TCKAAVAWEA--GKP----LVIE--EVEVA-PPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEA--AGIVES   70 (369)
T ss_pred             ccEEEEEecC--CCC----cEEE--EeeCC-CCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCccccccc--ceEEEE
Confidence            6899999886  544    4564  55556 78999999999999999999988774333445689999995  899999


Q ss_pred             ecCCCCCCCCCCEEEEc----------------------------------------------------cccceeEeecC
Q 018404           89 VDSGHPEFKKGDLVWGT----------------------------------------------------TGWEEYSLIKN  116 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~----------------------------------------------------g~~~~~~~v~~  116 (356)
                      +|+++++|++||+|+++                                                    |+|+||++++.
T Consensus        71 vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~  150 (369)
T cd08301          71 VGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHV  150 (369)
T ss_pred             eCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEec
Confidence            99999999999999863                                                    57999999999


Q ss_pred             CCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhc
Q 018404          117 PQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVW  195 (356)
Q Consensus       117 ~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~  195 (356)
                      .. ++++ |+++++. +++.+++.+.|||+++....++++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++. 
T Consensus       151 ~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~-  225 (369)
T cd08301         151 GC-VAKI-NPEAPLD-KVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIRGASRIIGVDLNPSKF-  225 (369)
T ss_pred             cc-EEEC-CCCCCHH-HhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-
Confidence            98 9999 9996655 57778889999999987778999999999998 69999999999999999 899999999998 


Q ss_pred             cccchhHHHHHHHhhcCCCEEEecCCc-ccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEEccccccC
Q 018404          196 LIPMQSQLVELLKNKFGFDDAFNYKEE-NDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAACGMISQYN  272 (356)
Q Consensus       196 ~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~  272 (356)
                               +.++ ++|++.++++.+. +.+.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|......
T Consensus       226 ---------~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~  295 (369)
T cd08301         226 ---------EQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDA  295 (369)
T ss_pred             ---------HHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCc
Confidence                     8888 9999988887652 156677887776689999999998 5788999999996 9999999854310


Q ss_pred             CCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEE
Q 018404          273 LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQL  350 (356)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~v  350 (356)
                          ........+ .+++++.|+....+.  ...+++++++++.+|.++.  .+++.|+|+++++||+.+.+++.. |++
T Consensus       296 ----~~~~~~~~~-~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~  367 (369)
T cd08301         296 ----VFSTHPMNL-LNGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCI  367 (369)
T ss_pred             ----ccccCHHHH-hcCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEE
Confidence                111223333 368888887665542  1456889999999998764  578899999999999999988764 887


Q ss_pred             E
Q 018404          351 V  351 (356)
Q Consensus       351 v  351 (356)
                      +
T Consensus       368 ~  368 (369)
T cd08301         368 L  368 (369)
T ss_pred             e
Confidence            6

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.3e-41  Score=318.83  Aligned_cols=305  Identities=18%  Similarity=0.204  Sum_probs=247.9

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~   87 (356)
                      .+.||+.+...  +.+.  .  ++..+++.| +++++||+|||.++|||++|++.+.+......+|.++|||+  +|+|+
T Consensus         3 ~~~~a~~~~~~--~~~~--~--l~~~~~~~p-~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~--aG~Vv   73 (375)
T PLN02178          3 DQNKAFGWAAN--DESG--V--LSPFHFSRR-ENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEI--VGIAT   73 (375)
T ss_pred             ccceeEEEEEc--cCCC--C--ceEEeecCC-CCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCcee--eEEEE
Confidence            45677777765  5543  2  343566667 78999999999999999999998763322234689999996  89999


Q ss_pred             EecCCCCCCCCCCEEEE--------------------------------------ccccceeEeecCCCcceeecCCCCC
Q 018404           88 VVDSGHPEFKKGDLVWG--------------------------------------TTGWEEYSLIKNPQGLFKIHHTDVP  129 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~  129 (356)
                      ++|+++++|++||+|+.                                      .|+|+||++++++. ++++ |++++
T Consensus        74 ~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~ls  151 (375)
T PLN02178         74 KVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRF-VLSI-PDGLP  151 (375)
T ss_pred             EECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHH-eEEC-CCCCC
Confidence            99999999999999973                                      27899999999998 9999 99965


Q ss_pred             ccchhcccCcchHHHHHHHHHHcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch-hccccchhHHHHHH
Q 018404          130 LSYYTGILGMPGMTAWAGFYEICA-PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK-VWLIPMQSQLVELL  207 (356)
Q Consensus       130 ~~~~~a~l~~~~~tA~~~l~~~~~-~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~-~~~~~~~~~~~~~~  207 (356)
                      +. +++++++.+.|||+++..... .++|++|+|.| +|++|++++|+|+.+|++|++++++.++ .          +.+
T Consensus       152 ~~-~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~----------~~a  219 (375)
T PLN02178        152 SD-SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKER----------EAI  219 (375)
T ss_pred             HH-HcchhhccchHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhH----------HHH
Confidence            55 577889999999999865433 36899999998 6999999999999999999999877655 4          667


Q ss_pred             HhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCch-HHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH
Q 018404          208 KNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV  286 (356)
Q Consensus       208 ~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  286 (356)
                      + ++|+++++++.+.    +.+.+.++ ++|++|||+|+. .+..++++++++|+++.+|....      ....+...++
T Consensus       220 ~-~lGa~~~i~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~  287 (375)
T PLN02178        220 D-RLGADSFLVTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLV  287 (375)
T ss_pred             H-hCCCcEEEcCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHH
Confidence            7 8999999886542    34555543 699999999985 78999999999999999987432      1224556677


Q ss_pred             hhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          287 YKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      .+++++.|+....     .+++.++++++++|++++.+ +.|+|+++++||+.+.+++..||+|+.+
T Consensus       288 ~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        288 LGRKMVGGSQIGG-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             hCCeEEEEeCccC-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            8888888876654     56789999999999999877 4699999999999999998889999986

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2.2e-41  Score=318.93  Aligned_cols=310  Identities=18%  Similarity=0.204  Sum_probs=248.1

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++...  +++    +++  .++|.| +++++||+|||.++|||++|++.+.+......+|.++|||+  +|+|+++
T Consensus         2 ~~a~~~~~~--~~~----l~~--~~~~~P-~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~--~G~V~~v   70 (368)
T TIGR02818         2 SRAAVAWAA--GQP----LKI--EEVDVE-MPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEG--AGIVEAV   70 (368)
T ss_pred             ceEEEEecC--CCC----eEE--EEecCC-CCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeecccc--EEEEEEE
Confidence            788888875  443    455  466667 78999999999999999999987763332345689999996  8999999


Q ss_pred             cCCCCCCCCCCEEEEc---------------------------------------------------cccceeEeecCCC
Q 018404           90 DSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYSLIKNPQ  118 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~~~  118 (356)
                      |+++++|++||+|++.                                                   |+|+||+++++..
T Consensus        71 G~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  150 (368)
T TIGR02818        71 GEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEIS  150 (368)
T ss_pred             CCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhh
Confidence            9999999999999752                                                   5899999999998


Q ss_pred             cceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccc
Q 018404          119 GLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLI  197 (356)
Q Consensus       119 ~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~  197 (356)
                       ++++ |+++++. +++.+++++.|||+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|++++++++++   
T Consensus       151 -~~~l-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~---  223 (368)
T TIGR02818       151 -LAKI-NPAAPLE-EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKF---  223 (368)
T ss_pred             -eEEC-CCCCCHH-HhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH---
Confidence             9999 9996555 57788889999999987778899999999998 69999999999999999 899999999998   


Q ss_pred             cchhHHHHHHHhhcCCCEEEecCCc-ccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEEccccccCCC
Q 018404          198 PMQSQLVELLKNKFGFDDAFNYKEE-NDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAACGMISQYNLS  274 (356)
Q Consensus       198 ~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  274 (356)
                             +.++ ++|++.++|+.+. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|.....   
T Consensus       224 -------~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~---  292 (368)
T TIGR02818       224 -------ELAK-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG---  292 (368)
T ss_pred             -------HHHH-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC---
Confidence                   8888 9999999987642 146677888776689999999997 6889999999986 999999974321   


Q ss_pred             CCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          275 QPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                       .........+.. +..+.+......  ....++.++++++.+|+++  +.+++.|+|+++++|++.+.+++. .|+++.
T Consensus       293 -~~~~~~~~~~~~-~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~  367 (368)
T TIGR02818       293 -QEISTRPFQLVT-GRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIH  367 (368)
T ss_pred             -CcccccHHHHhc-cceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEee
Confidence             011112222332 334455433221  1145688999999999886  568999999999999999987654 699886


Q ss_pred             e
Q 018404          353 V  353 (356)
Q Consensus       353 ~  353 (356)
                      +
T Consensus       368 ~  368 (368)
T TIGR02818       368 Y  368 (368)
T ss_pred             C
Confidence            4

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=5.3e-41  Score=316.51  Aligned_cols=310  Identities=21%  Similarity=0.247  Sum_probs=249.9

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      +|||+++.+.  +++    ++++  ++|.| .++++||+|||.+++||++|++.+.+......+|.++|||+  +|+|++
T Consensus         2 ~~~a~~~~~~--~~~----~~~~--~~~~P-~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~--~G~V~~   70 (368)
T cd08300           2 TCKAAVAWEA--GKP----LSIE--EVEVA-PPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEG--AGIVES   70 (368)
T ss_pred             cceEEEEecC--CCC----cEEE--EeecC-CCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccce--eEEEEE
Confidence            5789988775  444    4564  56666 78999999999999999999987764333335689999995  899999


Q ss_pred             ecCCCCCCCCCCEEEEc---------------------------------------------------cccceeEeecCC
Q 018404           89 VDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYSLIKNP  117 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~~  117 (356)
                      +|+++++|++||+|++.                                                   |+|+||+.++++
T Consensus        71 vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  150 (368)
T cd08300          71 VGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEI  150 (368)
T ss_pred             eCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchh
Confidence            99999999999999853                                                   479999999999


Q ss_pred             CcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhcc
Q 018404          118 QGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWL  196 (356)
Q Consensus       118 ~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~  196 (356)
                      . ++++ |+++++. +++.+++++.|||+++.....+++|++|+|+| +|++|++++|+|+.+|+ +|++++++++++  
T Consensus       151 ~-~~~i-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~--  224 (368)
T cd08300         151 S-VAKI-NPEAPLD-KVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKF--  224 (368)
T ss_pred             c-eEeC-CCCCChh-hhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHH--
Confidence            8 9999 9996555 57788889999999987778899999999998 69999999999999999 799999999998  


Q ss_pred             ccchhHHHHHHHhhcCCCEEEecCCcc-cHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEEccccccCC
Q 018404          197 IPMQSQLVELLKNKFGFDDAFNYKEEN-DLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAACGMISQYNL  273 (356)
Q Consensus       197 ~~~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~  273 (356)
                              +.++ ++|+++++++.+.+ ++.+.+++.+++++|+||||+|+ ..+..++++++++ |+++.+|.....  
T Consensus       225 --------~~~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~--  293 (368)
T cd08300         225 --------ELAK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG--  293 (368)
T ss_pred             --------HHHH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC--
Confidence                    8888 99999999887531 47778888877789999999998 6889999999987 999999975321  


Q ss_pred             CCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          274 SQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                        .........+. ++..+.++....+.  ..+++.++++++++|++++  .++++|+|+++++||+.+.+++. .|+++
T Consensus       294 --~~~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~  367 (368)
T cd08300         294 --QEISTRPFQLV-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVV  367 (368)
T ss_pred             --CccccCHHHHh-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeee
Confidence              01111222222 23455555444332  2467888999999999985  48899999999999999987765 58876


Q ss_pred             E
Q 018404          352 V  352 (356)
Q Consensus       352 ~  352 (356)
                      +
T Consensus       368 ~  368 (368)
T cd08300         368 K  368 (368)
T ss_pred             C
Confidence            4

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-41  Score=314.80  Aligned_cols=299  Identities=17%  Similarity=0.181  Sum_probs=242.0

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCC--CCCCCCCCCCCcceecE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQ--DPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~--~~~~~p~v~G~e~~~~G   84 (356)
                      ..+|+.++..+  +.     +++  .+.|.|  ++++||+|||.++|||++|++.+. +..  ....+|.++|||+  +|
T Consensus         3 ~~~~~~~~~~~--~~-----~~~--~~~~~p--~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~--~G   69 (343)
T PRK09880          3 VKTQSCVVAGK--KD-----VAV--TEQEIE--WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEV--IG   69 (343)
T ss_pred             ccceEEEEecC--Cc-----eEE--EecCCC--CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCccc--EE
Confidence            35788888764  22     345  455555  378999999999999999998765 221  1235689999995  99


Q ss_pred             EEEEecCCCCCCCCCCEEEE-----------------------------------ccccceeEeecCCCcceeecCCCCC
Q 018404           85 VAKVVDSGHPEFKKGDLVWG-----------------------------------TTGWEEYSLIKNPQGLFKIHHTDVP  129 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~  129 (356)
                      +|+++  ++++|++||+|+.                                   .|+|+||++++++. ++++ |++++
T Consensus        70 ~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~-~~~~-P~~l~  145 (343)
T PRK09880         70 KIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQ-CIPY-PEKAD  145 (343)
T ss_pred             EEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHH-eEEC-CCCCC
Confidence            99999  7889999999973                                   27899999999999 9999 99954


Q ss_pred             ccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHH
Q 018404          130 LSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLK  208 (356)
Q Consensus       130 ~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~  208 (356)
                      +  +.+++..++.+||+++.. ....+|++|+|+| +|++|++++|+|+.+|+ +|++++++++++          +.++
T Consensus       146 ~--~~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~----------~~a~  211 (343)
T PRK09880        146 E--KVMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSL----------SLAR  211 (343)
T ss_pred             H--HHHHhhcHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHH----------HHHH
Confidence            4  455677788999999965 4566899999998 59999999999999999 699999999998          8998


Q ss_pred             hhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHh
Q 018404          209 NKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVY  287 (356)
Q Consensus       209 ~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  287 (356)
                       ++|+++++|++++ ++.+.. +. .+++|++|||+|+ ..+..++++++++|+++.+|....      ....+...++.
T Consensus       212 -~lGa~~vi~~~~~-~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~  281 (343)
T PRK09880        212 -EMGADKLVNPQND-DLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIV  281 (343)
T ss_pred             -HcCCcEEecCCcc-cHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHh
Confidence             9999999998775 554322 22 2369999999998 688999999999999999997432      12345566778


Q ss_pred             hcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          288 KRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +++++.++...      .+.++++++++++|++++  .++++|+|+++++|++.+.+++..||+++.+
T Consensus       282 k~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        282 KEISLKGSFRF------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             CCcEEEEEeec------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            89988887542      356889999999999985  5789999999999999999888789999864

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.2e-40  Score=312.61  Aligned_cols=306  Identities=17%  Similarity=0.177  Sum_probs=251.3

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~   87 (356)
                      ..++|++++++  +++    +.+  .+++.| +++++||+|||.+++||++|++.+.+......+|.++|||+  +|+|+
T Consensus         8 ~~~~~~~~~~~--~~~----~~~--~~~~~p-~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~--~G~Vv   76 (357)
T PLN02514          8 KKTTGWAARDP--SGH----LSP--YTYTLR-KTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEV--VGEVV   76 (357)
T ss_pred             ceEEEEEEecC--CCC----ceE--EeecCC-CCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCcee--eEEEE
Confidence            45789999887  544    445  456666 78999999999999999999987763222234688999995  89999


Q ss_pred             EecCCCCCCCCCCEEEE--------------------------------------ccccceeEeecCCCcceeecCCCCC
Q 018404           88 VVDSGHPEFKKGDLVWG--------------------------------------TTGWEEYSLIKNPQGLFKIHHTDVP  129 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~  129 (356)
                      ++|+++++|++||+|+.                                      .|+|+||++++... ++++ |++++
T Consensus        77 ~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~  154 (357)
T PLN02514         77 EVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKF-VVKI-PEGMA  154 (357)
T ss_pred             EECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHH-eEEC-CCCCC
Confidence            99999999999999973                                      27899999999998 9999 99966


Q ss_pred             ccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh
Q 018404          130 LSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN  209 (356)
Q Consensus       130 ~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~  209 (356)
                      +. +++++++++.|||+++......++|++|+|+| +|++|++++|+||.+|++|++++++++++          +.+..
T Consensus       155 ~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~----------~~~~~  222 (357)
T PLN02514        155 PE-QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKR----------EEALE  222 (357)
T ss_pred             HH-HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHH----------HHHHH
Confidence            55 67889999999999997766678999999996 79999999999999999999999887776          55543


Q ss_pred             hcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhh
Q 018404          210 KFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYK  288 (356)
Q Consensus       210 ~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  288 (356)
                      ++|++.++++.+.    +.+.+.+. ++|++|||+|. ..+..++++++++|+++.+|.....      .......++.+
T Consensus       223 ~~Ga~~~i~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~  291 (357)
T PLN02514        223 HLGADDYLVSSDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTP------LQFVTPMLMLG  291 (357)
T ss_pred             hcCCcEEecCCCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCC------CcccHHHHhhC
Confidence            7999877765442    23444443 69999999997 6889999999999999999975321      12445567788


Q ss_pred             cceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          289 RIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      ++++.|++...     ..+++++++++.+|++++.++ .|+|+++.+||+.+.+++..||+|+.++.
T Consensus       292 ~~~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~i~-~~~l~~~~~A~~~~~~~~~~gk~v~~~~~  352 (357)
T PLN02514        292 RKVITGSFIGS-----MKETEEMLEFCKEKGLTSMIE-VVKMDYVNTAFERLEKNDVRYRFVVDVAG  352 (357)
T ss_pred             CcEEEEEecCC-----HHHHHHHHHHHHhCCCcCcEE-EEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence            89988887665     467899999999999987774 79999999999999999888999998753

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=9.4e-41  Score=309.88  Aligned_cols=296  Identities=16%  Similarity=0.110  Sum_probs=243.3

Q ss_pred             EEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEecC
Q 018404           12 QVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDS   91 (356)
Q Consensus        12 a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~vG~   91 (356)
                      |+.+.++  |.|....+++  .++|.| .++++||+|||.++|||++|++...+......+|.++|||+  +|+|+++|+
T Consensus         1 ~~~~~~~--g~~~~~~l~~--~~~p~P-~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~--~G~V~~vG~   73 (329)
T TIGR02822         1 AWEVERP--GPIEDGPLRF--VERPVP-RPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEV--VGEVAGRGA   73 (329)
T ss_pred             CeeeecC--CcCCCCCceE--EeCCCC-CCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcce--EEEEEEECC
Confidence            3566666  6664334555  467777 78999999999999999999988764322234578999995  899999999


Q ss_pred             CCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCCCCccchhcccCcc
Q 018404           92 GHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMP  140 (356)
Q Consensus        92 ~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~  140 (356)
                      +++++++||+|+.                               .|+|+||+.+++.. ++++ |+++++. +++++++.
T Consensus        74 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~~~~~-~aa~l~~~  150 (329)
T TIGR02822        74 DAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAF-AYRL-PTGYDDV-ELAPLLCA  150 (329)
T ss_pred             CCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEecccc-EEEC-CCCCCHH-HhHHHhcc
Confidence            9999999999973                               27899999999998 9999 9996555 57788999


Q ss_pred             hHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecC
Q 018404          141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYK  220 (356)
Q Consensus       141 ~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~  220 (356)
                      +.|||+++. .+++++|++|+|+|+ |++|++++|+|+.+|++|++++++++++          +.++ ++|+++++++.
T Consensus       151 ~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~----------~~a~-~~Ga~~vi~~~  217 (329)
T TIGR02822       151 GIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAAR----------RLAL-ALGAASAGGAY  217 (329)
T ss_pred             chHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHH----------HHHH-HhCCceecccc
Confidence            999999995 578999999999995 9999999999999999999999999998          9999 99999988754


Q ss_pred             CcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeec
Q 018404          221 EENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFD  299 (356)
Q Consensus       221 ~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (356)
                      +. .         .+++|+++++.+. ..+..++++++++|+++.+|.....     ....+...++.+++++.++....
T Consensus       218 ~~-~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~  282 (329)
T TIGR02822       218 DT-P---------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTD-----TPPLNYQRHLFYERQIRSVTSNT  282 (329)
T ss_pred             cc-C---------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCcc-----CCCCCHHHHhhCCcEEEEeecCC
Confidence            32 1         1268999988876 7889999999999999999974321     11234455667888887765443


Q ss_pred             chhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          300 YFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       300 ~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                           .+++.++++++.+|++++ ++++|+|+++++||+.+.+++..||+|+
T Consensus       283 -----~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       283 -----RADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             -----HHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence                 456788999999999974 6789999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=4.2e-40  Score=305.00  Aligned_cols=314  Identities=18%  Similarity=0.229  Sum_probs=261.6

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++.++  +.|. ..  ++..++|.| .+++++|+|||.++++|+.|+..+.+. ......|.++|||+  +|+|++
T Consensus         1 m~a~~~~~~--~~~~-~~--~~~~~~~~p-~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~--~G~V~~   72 (324)
T cd08292           1 MRAAVHTQF--GDPA-DV--LEIGEVPKP-TPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEA--VGVVDA   72 (324)
T ss_pred             CeeEEEccC--CChh-He--EEEeecCCC-CCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcce--EEEEEE
Confidence            689999876  6551 22  444667777 789999999999999999998877532 21234578999995  899999


Q ss_pred             ecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecC
Q 018404           89 VDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAA  165 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga  165 (356)
                      +|++++++++||+|+++   |+|++|++++... ++++ |++++.. +++.++..+.+||+++. .+++++|++|+|+|+
T Consensus        73 ~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~aa~~~~~~~ta~~~~~-~~~~~~g~~vlI~g~  148 (324)
T cd08292          73 VGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADG-LVPL-PDGISDE-VAAQLIAMPLSALMLLD-FLGVKPGQWLIQNAA  148 (324)
T ss_pred             eCCCCCCCCCCCEEEeccCCCcceeEEEEchHH-eEEC-CCCCCHH-HhhhccccHHHHHHHHH-hhCCCCCCEEEEccc
Confidence            99999999999999985   7999999999988 9999 9996554 57778888999999984 478999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCC
Q 018404          166 SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHV  244 (356)
Q Consensus       166 ~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~  244 (356)
                      +|++|++++|+|+.+|+++++++++.++.          +.++ ++|+++++++.+. ++.+.+.+.+++ ++|++|||+
T Consensus       149 ~g~ig~~~~~~a~~~G~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~  216 (324)
T cd08292         149 GGAVGKLVAMLAAARGINVINLVRRDAGV----------AELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSV  216 (324)
T ss_pred             ccHHHHHHHHHHHHCCCeEEEEecCHHHH----------HHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECC
Confidence            99999999999999999999999998887          8888 7899889988776 788889888887 999999999


Q ss_pred             CchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-----hhhHHHHHHHHHHHHHcCC
Q 018404          245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-----FPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       245 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~g~  319 (356)
                      |+.....++++++++|+++.+|.....     .........+.+++++.++....+     +....+.++++++++.+|.
T Consensus       217 g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  291 (324)
T cd08292         217 GGKLAGELLSLLGEGGTLVSFGSMSGE-----PMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQ  291 (324)
T ss_pred             CChhHHHHHHhhcCCcEEEEEecCCCC-----CCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCC
Confidence            998889999999999999999874221     112344445678999988876543     2234567899999999999


Q ss_pred             CccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          320 VVYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       320 l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      +++.+.+.|+++++.+|++.+.++...+|++++
T Consensus       292 i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         292 LLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             ccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            987777889999999999999888888898863

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=4.7e-40  Score=309.71  Aligned_cols=307  Identities=18%  Similarity=0.214  Sum_probs=249.4

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      .|||+++.+.  +++    +.+  .++|.| +++++||+|||.++++|++|++.+.+... ..+|.++|||+  +|+|++
T Consensus         2 ~~ka~~~~~~--~~~----~~~--~~~~~p-~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~--~G~V~~   69 (365)
T cd08277           2 KCKAAVAWEA--GKP----LVI--EEIEVA-PPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEG--AGIVES   69 (365)
T ss_pred             ccEEEEEccC--CCC----cEE--EEEECC-CCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccce--eEEEEe
Confidence            5789999876  443    455  455666 78999999999999999999988763322 45679999995  899999


Q ss_pred             ecCCCCCCCCCCEEEEc--------------------------------------------------cccceeEeecCCC
Q 018404           89 VDSGHPEFKKGDLVWGT--------------------------------------------------TGWEEYSLIKNPQ  118 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~--------------------------------------------------g~~~~~~~v~~~~  118 (356)
                      +|++++++++||+|++.                                                  |+|+||++++.+.
T Consensus        70 vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~  149 (365)
T cd08277          70 VGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENY  149 (365)
T ss_pred             eCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhh
Confidence            99999999999999863                                                  6899999999998


Q ss_pred             cceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccc
Q 018404          119 GLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLI  197 (356)
Q Consensus       119 ~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~  197 (356)
                       ++++ |++++.. +++.+++++.|||+++...+.+++|++|+|+| +|++|++++|+|+.+|+ +|++++++++++   
T Consensus       150 -~~~l-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~---  222 (365)
T cd08277         150 -VAKI-DPAAPLE-HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKF---  222 (365)
T ss_pred             -eEEC-CCCCCHH-HhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHH---
Confidence             9999 9996555 57788889999999987778899999999997 69999999999999999 799999999998   


Q ss_pred             cchhHHHHHHHhhcCCCEEEecCCc-ccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEEccccccCCC
Q 018404          198 PMQSQLVELLKNKFGFDDAFNYKEE-NDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAACGMISQYNLS  274 (356)
Q Consensus       198 ~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  274 (356)
                             +.++ ++|+++++++.+. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|...+..  
T Consensus       223 -------~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--  292 (365)
T cd08277         223 -------EKAK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAE--  292 (365)
T ss_pred             -------HHHH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccc--
Confidence                   8888 8999989887652 135677777776689999999997 6788999999885 9999999754321  


Q ss_pred             CCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          275 QPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                         ...+...++. ++++.+++...+.  ....++++++++.++.++  +.+++.|+|+|+++|++.+.+++ ..|+++
T Consensus       293 ---~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i  364 (365)
T cd08277         293 ---LSIRPFQLIL-GRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI  364 (365)
T ss_pred             ---cccCHhHHhh-CCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence               1123333443 7788777665432  134678899999998765  66889999999999999998877 458876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-40  Score=306.76  Aligned_cols=309  Identities=21%  Similarity=0.255  Sum_probs=244.6

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCC-CCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEE-GSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~-~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||++++++  +.     +++  .++|.| .+ +++||+|||.++++|++|+....... ...+|.++|||+  +|+|++
T Consensus         1 Mka~~~~~~--~~-----~~~--~~~~~P-~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~--~G~V~~   67 (347)
T PRK10309          1 MKSVVNDTD--GI-----VRV--AESPIP-EIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEF--SGYVEA   67 (347)
T ss_pred             CceEEEeCC--Cc-----eEE--EECCCC-CCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccce--EEEEEE
Confidence            689999775  32     344  566666 65 68999999999999999987533111 123578999995  899999


Q ss_pred             ecCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhcccC
Q 018404           89 VDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILG  138 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~  138 (356)
                      +|+++++|++||+|+++                              |+|+||++++++. ++++ |+++++. +++.+ 
T Consensus        68 vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~~s~~-~aa~~-  143 (347)
T PRK10309         68 VGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKN-LFAL-PTDMPIE-DGAFI-  143 (347)
T ss_pred             eCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHH-eEEC-cCCCCHH-Hhhhh-
Confidence            99999999999999863                              7899999999998 9999 9985443 34433 


Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCCEEE
Q 018404          139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF  217 (356)
Q Consensus       139 ~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv  217 (356)
                      .++.++++++ ....+++|++|+|+| +|++|++++|+|+.+|++ |++++++++++          +.++ ++|+++++
T Consensus       144 ~~~~~~~~~~-~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~----------~~~~-~~Ga~~~i  210 (347)
T PRK10309        144 EPITVGLHAF-HLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKL----------ALAK-SLGAMQTF  210 (347)
T ss_pred             hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHH----------HHHH-HcCCceEe
Confidence            3566688886 557889999999997 799999999999999996 78888898888          8888 89999999


Q ss_pred             ecCCcccHHHHHHHhCCC-Ccc-EEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeec
Q 018404          218 NYKEENDLDAALKRCFPE-GID-IYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEG  294 (356)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~-~~d-~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (356)
                      ++++. . .+.+.+.+.+ ++| ++|||+|+ ..+..++++++++|+++.+|...+. ..  ........++.+++++.|
T Consensus       211 ~~~~~-~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~--~~~~~~~~~~~~~~~i~g  285 (347)
T PRK10309        211 NSREM-S-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-LH--LTSATFGKILRKELTVIG  285 (347)
T ss_pred             cCccc-C-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-cc--cChhhhhHHhhcCcEEEE
Confidence            88764 4 5567777766 888 99999998 6889999999999999999975421 10  111123356778899998


Q ss_pred             eeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          295 FVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       295 ~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++.........++++++++++.+|.++  +.+++.|+|+++++|++.+.+++..||+|+.+
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        286 SWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             EeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            765422111246788999999999985  67899999999999999999988889999975

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.4e-39  Score=304.75  Aligned_cols=288  Identities=19%  Similarity=0.225  Sum_probs=239.0

Q ss_pred             eecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCCCCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEE-------
Q 018404           33 SSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWG-------  104 (356)
Q Consensus        33 ~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~-------  104 (356)
                      .++|.| +++++||+|||.++++|++|++.+. .+.....+|.++|||+  +|+|+++|+++..+ +||+|+.       
T Consensus        14 ~~~p~P-~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~--~G~V~~vG~~v~~~-~GdrV~~~~~~~cg   89 (349)
T TIGR03201        14 TRVEIP-ELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEI--SGRVIQAGAGAASW-IGKAVIVPAVIPCG   89 (349)
T ss_pred             EeccCC-CCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccc--eEEEEEeCCCcCCC-CCCEEEECCCCCCC
Confidence            466777 7899999999999999999998764 2222335689999995  89999999999887 9999985       


Q ss_pred             -----------------------ccccceeEeecCCCcceeecCC------CCCccchhcccCcchHHHHHHHHHHcCCC
Q 018404          105 -----------------------TTGWEEYSLIKNPQGLFKIHHT------DVPLSYYTGILGMPGMTAWAGFYEICAPK  155 (356)
Q Consensus       105 -----------------------~g~~~~~~~v~~~~~l~~~~p~------~~~~~~~~a~l~~~~~tA~~~l~~~~~~~  155 (356)
                                             .|+|+||+.++.+. ++++ |+      ++++. .++++++++.|||+++.. ..++
T Consensus        90 ~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~-~~~i-p~~~~~~~~~~~~-~~a~~~~~~~ta~~a~~~-~~~~  165 (349)
T TIGR03201        90 ECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKG-LCVV-DEARLAAAGLPLE-HVSVVADAVTTPYQAAVQ-AGLK  165 (349)
T ss_pred             CChhhhCcCcccCCCCCccCcCCCCcccceEEechHH-eEEC-CcccccccCCCHH-HhhhhcchHHHHHHHHHh-cCCC
Confidence                                   27999999999998 9999 87      64444 577788999999999864 7899


Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc--ccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE--NDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~~~~~~  233 (356)
                      +|++|+|+|+ |++|++++|+|+.+|++|++++++++++          +.++ ++|+++++++.+.  .++.+.+++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~----------~~~~-~~Ga~~~i~~~~~~~~~~~~~~~~~t  233 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKL----------EMMK-GFGADLTLNPKDKSAREVKKLIKAFA  233 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHH----------HHHH-HhCCceEecCccccHHHHHHHHHhhc
Confidence            9999999997 9999999999999999999999999998          8888 8999988987653  14667788888


Q ss_pred             CC-Ccc----EEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHH
Q 018404          234 PE-GID----IYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRF  307 (356)
Q Consensus       234 ~~-~~d----~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (356)
                      ++ ++|    .+|||+|+ ..+..++++++++|+++.+|.....      ...+...++.+++++.+.+...     .++
T Consensus       234 ~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~~~g~~~~~-----~~~  302 (349)
T TIGR03201       234 KARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK------TEYRLSNLMAFHARALGNWGCP-----PDR  302 (349)
T ss_pred             ccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC------cccCHHHHhhcccEEEEEecCC-----HHH
Confidence            76 776    89999998 5678899999999999999975421      1234455666777777765443     567


Q ss_pred             HHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          308 LDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       308 l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ++++++++.+|++++  .++ .|+|+++++||+.+.+++..||++++
T Consensus       303 ~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~  348 (349)
T TIGR03201       303 YPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILT  348 (349)
T ss_pred             HHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEec
Confidence            899999999999975  354 68999999999999999888999885

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=3.5e-39  Score=302.40  Aligned_cols=301  Identities=21%  Similarity=0.255  Sum_probs=250.1

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-C----------CCCCCCCCCCC
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-Q----------DPDFSSFTPGS   78 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~----------~~~~~p~v~G~   78 (356)
                      |||+++.++  +     .+.++  ++|.| +++++||+||+.++++|++|+...... .          ....+|.++||
T Consensus         1 mka~~~~~~--~-----~l~~~--~~~~p-~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~   70 (351)
T cd08233           1 MKAARYHGR--K-----DIRVE--EVPEP-PVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGH   70 (351)
T ss_pred             CceEEEecC--C-----ceEEE--eccCC-CCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecc
Confidence            689999764  2     24554  56666 789999999999999999998755411 1          01236889999


Q ss_pred             cceecEEEEEecCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCC
Q 018404           79 PIEGFGVAKVVDSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTD  127 (356)
Q Consensus        79 e~~~~G~V~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~  127 (356)
                      |+  +|+|+++|++++++++||+|++                               .|+|++|+.++.+. ++++ |++
T Consensus        71 e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~-~~~l-P~~  146 (351)
T cd08233          71 EF--SGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYH-VHKL-PDN  146 (351)
T ss_pred             cc--eEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHH-eEEC-cCC
Confidence            85  8999999999999999999986                               37899999999998 9999 999


Q ss_pred             CCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHH
Q 018404          128 VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVEL  206 (356)
Q Consensus       128 ~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~  206 (356)
                      ++.. ++ ++..++.|||+++ ..+++++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++.          +.
T Consensus       147 ~~~~-~a-a~~~~~~ta~~~l-~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~----------~~  212 (351)
T cd08233         147 VPLE-EA-ALVEPLAVAWHAV-RRSGFKPGDTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEARR----------EL  212 (351)
T ss_pred             CCHH-Hh-hhccHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHH----------HH
Confidence            5443 34 4447888999999 678899999999998 69999999999999999 899999888888          88


Q ss_pred             HHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHH
Q 018404          207 LKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMN  284 (356)
Q Consensus       207 ~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  284 (356)
                      ++ ++|++.++++.+. ++.+.+++.+++ ++|++|||+|+ ..+..++++|+++|+++.+|..+.      ....+...
T Consensus       213 ~~-~~ga~~~i~~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~  284 (351)
T cd08233         213 AE-ELGATIVLDPTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPND  284 (351)
T ss_pred             HH-HhCCCEEECCCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHH
Confidence            88 8999999998876 788889888877 79999999996 788999999999999999997541      12345666


Q ss_pred             HHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcH-HHHHHHHHcCCCc-ceEEE
Q 018404          285 VVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENA-PAALVGLFSGRNV-GKQLV  351 (356)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~-~~a~~~~~~~~~~-gk~vv  351 (356)
                      ++.+++++.++....     .++++++++++++|.++  +.++++|+++|+ ++|++.+.+++.. ||+||
T Consensus       285 ~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         285 LVLKEKTLTGSICYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             HHhhCcEEEEEeccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            778899988876543     46789999999999995  457889999996 7999999988875 89987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=4.1e-39  Score=304.99  Aligned_cols=311  Identities=16%  Similarity=0.170  Sum_probs=234.9

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCC-------CCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcce
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEG-------SNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIE   81 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~-------~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~   81 (356)
                      -|||+++..+  +     +++++  ++|.| .++       ++||+|||.++|||++|++.+.+.. ...+|.++|||+ 
T Consensus         2 ~mka~v~~~~--~-----~~~~~--e~~~P-~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~-~~~~p~i~GhE~-   69 (393)
T TIGR02819         2 GNRGVVYLGP--G-----KVEVQ--DIDYP-KLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT-TAPTGLVLGHEI-   69 (393)
T ss_pred             CceEEEEecC--C-----ceeEE--eccCC-cccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC-CCCCCcccccee-
Confidence            4889999764  3     24554  55555 442       6999999999999999999876322 234689999995 


Q ss_pred             ecEEEEEecCCCCCCCCCCEEEE----------------------------------------ccccceeEeecCC--Cc
Q 018404           82 GFGVAKVVDSGHPEFKKGDLVWG----------------------------------------TTGWEEYSLIKNP--QG  119 (356)
Q Consensus        82 ~~G~V~~vG~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~--~~  119 (356)
                       +|+|+++|++|++|++||||..                                        .|+|+||+++++.  . 
T Consensus        70 -~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~-  147 (393)
T TIGR02819        70 -TGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFN-  147 (393)
T ss_pred             -EEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCc-
Confidence             9999999999999999999954                                        1788999999964  5 


Q ss_pred             ceeecCCCCCcc---chhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEE-EeCCcchhc
Q 018404          120 LFKIHHTDVPLS---YYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG-SAGSREKVW  195 (356)
Q Consensus       120 l~~~~p~~~~~~---~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~-~~~~~~~~~  195 (356)
                      ++++ |++++..   ..++++.+++.+||+++. ..++++|++|+|.| +|++|++++|+|+.+|+++++ ++++++++ 
T Consensus       148 l~~v-P~~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~-  223 (393)
T TIGR02819       148 LLKF-PDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARL-  223 (393)
T ss_pred             eEEC-CCcccccccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHH-
Confidence            9999 8874321   135778889999999985 47899999999966 899999999999999997554 45667787 


Q ss_pred             cccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCch---------------HHHHHHHhhccC
Q 018404          196 LIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGK---------------MLDAVLLNMRLH  259 (356)
Q Consensus       196 ~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~---------------~~~~~~~~l~~~  259 (356)
                               +.++ ++|++. +++....++.+.+.+.+++ ++|++|||+|..               .+..++++++++
T Consensus       224 ---------~~a~-~~Ga~~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (393)
T TIGR02819       224 ---------AQAR-SFGCET-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG  292 (393)
T ss_pred             ---------HHHH-HcCCeE-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC
Confidence                     8888 999974 5543322677788888876 899999999974               799999999999


Q ss_pred             CeEEEEcccc-ccCCCCC------ccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--cee-eeeC
Q 018404          260 GRIAACGMIS-QYNLSQP------EGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VED-VADG  329 (356)
Q Consensus       260 G~~v~~g~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~-~~~~  329 (356)
                      |+++.+|... .......      .........+.+++++.+....     ..+++.++++++.+|++++  .++ ++|+
T Consensus       293 G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~-----~~~~~~~~~~~~~~g~i~~~~~i~~~~~~  367 (393)
T TIGR02819       293 GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTP-----VMKYNRNLMQAILHDRVQIAKAVNVTVIS  367 (393)
T ss_pred             CEEEEeeecCCcccccccccccccccccchHHhhccCceEEeccCC-----hhhhHHHHHHHHHcCCCCHHHceecceec
Confidence            9999999852 1110000      1112233344555555542111     1344578999999999874  355 6899


Q ss_pred             CCcHHHHHHHHHcCCCcceEEEEec
Q 018404          330 LENAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       330 l~~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      |+++++||+.+.++. .+|+++.++
T Consensus       368 l~~~~~a~~~~~~~~-~~Kvvi~~~  391 (393)
T TIGR02819       368 LDDAPEGYAEFDAGA-AKKFVIDPH  391 (393)
T ss_pred             HHHHHHHHHHHhhCC-ceEEEEeCC
Confidence            999999999998775 489999875

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2e-39  Score=304.44  Aligned_cols=302  Identities=20%  Similarity=0.189  Sum_probs=232.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCC---CCCCCCCCCCcceecEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD---PDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~---~~~~p~v~G~e~~~~G~V   86 (356)
                      |||+++..   +++.   +++  .++|.| +++++||+|||.+++||++|++.+.+...   ...+|.++|||+  +|+|
T Consensus         1 mka~~~~~---~~~~---l~~--~~~p~p-~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~--~G~V   69 (355)
T cd08230           1 MKAIAVKP---GKPG---VRV--VDIPEP-EPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEA--LGVV   69 (355)
T ss_pred             CceeEecC---CCCC---CeE--EeCCCC-CCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeecccc--ceEE
Confidence            57888875   3332   455  567777 88999999999999999999998873221   123578999995  9999


Q ss_pred             EEecCCCCCCCCCCEEEEc---------------------------------cccceeEeecCCCcceeecCCCCCccch
Q 018404           87 KVVDSGHPEFKKGDLVWGT---------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYY  133 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~  133 (356)
                      +++|++ ++|++||+|++.                                 |+|+||+++++.. ++++ |++  ++ +
T Consensus        70 ~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~-~~~~-P~~--~~-~  143 (355)
T cd08230          70 EEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEY-LVKV-PPS--LA-D  143 (355)
T ss_pred             EEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEecccc-EEEC-CCC--CC-c
Confidence            999999 999999999752                                 6799999999999 9999 998  44 5


Q ss_pred             hcccCcchHHHHHHHHHH------cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CcchhccccchhHHH
Q 018404          134 TGILGMPGMTAWAGFYEI------CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG---SREKVWLIPMQSQLV  204 (356)
Q Consensus       134 ~a~l~~~~~tA~~~l~~~------~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~---~~~~~~~~~~~~~~~  204 (356)
                      ++++..++.+++.++...      ...++|++|+|+| +|++|++++|+||.+|++|+++++   +++++          
T Consensus       144 ~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~----------  212 (355)
T cd08230         144 VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKA----------  212 (355)
T ss_pred             ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHH----------
Confidence            566666776666554332      2356899999998 699999999999999999999997   56777          


Q ss_pred             HHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEcccccc-CCCCCccccch
Q 018404          205 ELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQY-NLSQPEGVHNL  282 (356)
Q Consensus       205 ~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~  282 (356)
                      +.++ ++|++. +++.++ ++.+ .+  ..+++|+||||+|+ ..+..++++++++|+++.+|...+. ..... .....
T Consensus       213 ~~~~-~~Ga~~-v~~~~~-~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~-~~~~~  285 (355)
T cd08230         213 DIVE-ELGATY-VNSSKT-PVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVD-GGELN  285 (355)
T ss_pred             HHHH-HcCCEE-ecCCcc-chhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccC-hhhhh
Confidence            8888 999986 566554 5443 22  12489999999998 5789999999999999999986541 11100 00013


Q ss_pred             HHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCC------CccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          283 MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGK------VVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~------l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ..++.+++++.|+....     .++++++++++.++.      +++.++++|+++++++||+.+.++.  +|+|+.+
T Consensus       286 ~~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         286 RDLVLGNKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             hhHhhcCcEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            45777999998876544     456778888888766      6677899999999999999886544  5999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=4.3e-39  Score=307.38  Aligned_cols=311  Identities=18%  Similarity=0.149  Sum_probs=242.0

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCC--C----CCCCCCCCCCcc
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQ--D----PDFSSFTPGSPI   80 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~--~----~~~~p~v~G~e~   80 (356)
                      |.||++++..+  +     ++++  .++|.| +++++||+|||.++|||++|++.+. +..  .    ...+|+++|||+
T Consensus         1 m~~~a~~~~~~--~-----~l~~--~e~p~P-~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~   70 (410)
T cd08238           1 MKTKAWRMYGK--G-----DLRL--EKFELP-EIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEF   70 (410)
T ss_pred             CCcEEEEEEcC--C-----ceEE--EecCCC-CCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceecccc
Confidence            35889999764  2     2445  567777 7899999999999999999998653 211  1    023678999996


Q ss_pred             eecEEEEEecCCCC-CCCCCCEEEEc-------------------cccceeEeecCC----CcceeecCCCCCccchhcc
Q 018404           81 EGFGVAKVVDSGHP-EFKKGDLVWGT-------------------TGWEEYSLIKNP----QGLFKIHHTDVPLSYYTGI  136 (356)
Q Consensus        81 ~~~G~V~~vG~~v~-~~~~Gd~V~~~-------------------g~~~~~~~v~~~----~~l~~~~p~~~~~~~~~a~  136 (356)
                        +|+|+++|++++ +|++||+|++.                   |+|+||++++++    . ++++ |+++++.  .++
T Consensus        71 --~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~-~~~l-P~~l~~~--~aa  144 (410)
T cd08238          71 --AGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQD-CLLI-YEGDGYA--EAS  144 (410)
T ss_pred             --EEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCC-eEEC-CCCCCHH--HHh
Confidence              899999999998 59999999863                   899999999987    5 8999 9985443  333


Q ss_pred             cCcchH---HHHHHH--------HHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCcchhccccchhH
Q 018404          137 LGMPGM---TAWAGF--------YEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC---YVVGSAGSREKVWLIPMQSQ  202 (356)
Q Consensus       137 l~~~~~---tA~~~l--------~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~---~Vi~~~~~~~~~~~~~~~~~  202 (356)
                      +..++.   +++.++        ...+++++|++|+|+|++|++|++++|+|+.+|+   +|++++++++++        
T Consensus       145 l~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~--------  216 (410)
T cd08238         145 LVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERL--------  216 (410)
T ss_pred             hcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHH--------
Confidence            322221   233332        2456789999999999999999999999999864   899999999998        


Q ss_pred             HHHHHHhhc--------CCC-EEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEcccccc
Q 018404          203 LVELLKNKF--------GFD-DAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQY  271 (356)
Q Consensus       203 ~~~~~~~~~--------g~~-~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~  271 (356)
                        +.++ ++        |++ .++++.+.+++.+.+++.+++ ++|++||++|+ ..+..++++++++|+++.++.....
T Consensus       217 --~~a~-~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~  293 (410)
T cd08238         217 --ARAQ-RLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDK  293 (410)
T ss_pred             --HHHH-HhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCC
Confidence              8888 75        665 567765422678888888887 99999999986 7889999999999988876542111


Q ss_pred             CCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceE
Q 018404          272 NLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQ  349 (356)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~  349 (356)
                      .   .....+...++.+++++.|+....     .++++++++++.+|++++  .++++|+|+++++|++.+. ++..||+
T Consensus       294 ~---~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKv  364 (410)
T cd08238         294 N---FSAPLNFYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKK  364 (410)
T ss_pred             C---ccccccHHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceE
Confidence            0   012345567788999988876544     567899999999999987  5899999999999999998 7778999


Q ss_pred             EEEec
Q 018404          350 LVVVS  354 (356)
Q Consensus       350 vv~~~  354 (356)
                      |+.++
T Consensus       365 vl~~~  369 (410)
T cd08238         365 LIYTQ  369 (410)
T ss_pred             EEECC
Confidence            99874

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=5.9e-39  Score=301.94  Aligned_cols=306  Identities=19%  Similarity=0.206  Sum_probs=247.3

Q ss_pred             cEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEec
Q 018404           11 KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVD   90 (356)
Q Consensus        11 ~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~vG   90 (356)
                      ||+++.++  +++    ++++  +++.| .++++||+|||.++++|++|+....+......+|.++|||+  +|+|+++|
T Consensus         2 ka~~~~~~--~~~----l~~~--~~~~p-~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~--~G~V~~vG   70 (361)
T cd08231           2 RAAVLTGP--GKP----LEIR--EVPLP-DLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEG--VGRVVALG   70 (361)
T ss_pred             eEEEEcCC--CCC----CEEE--eccCC-CCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCC--ceEEEEeC
Confidence            78899886  532    4554  56666 78999999999999999999987763322245688999985  89999999


Q ss_pred             CCCCC------CCCCCEEEEc-------------------------------------cccceeEeecCC-CcceeecCC
Q 018404           91 SGHPE------FKKGDLVWGT-------------------------------------TGWEEYSLIKNP-QGLFKIHHT  126 (356)
Q Consensus        91 ~~v~~------~~~Gd~V~~~-------------------------------------g~~~~~~~v~~~-~~l~~~~p~  126 (356)
                      +++++      |++||+|+++                                     |+|++|++++++ . ++++ |+
T Consensus        71 ~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~-~~~l-P~  148 (361)
T cd08231          71 GGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTA-IVRV-PD  148 (361)
T ss_pred             CCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCc-eEEC-CC
Confidence            99986      9999999875                                     789999999986 6 9999 88


Q ss_pred             CCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHH
Q 018404          127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVE  205 (356)
Q Consensus       127 ~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~  205 (356)
                      +++.. +++.+++++.|||+++......++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.          +
T Consensus       149 ~~~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~----------~  216 (361)
T cd08231         149 NVPDE-VAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERL----------E  216 (361)
T ss_pred             CCCHH-HHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH----------H
Confidence            85443 46677799999999998777777999999997 79999999999999999 999999998887          8


Q ss_pred             HHHhhcCCCEEEecCCcc--cHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccc
Q 018404          206 LLKNKFGFDDAFNYKEEN--DLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHN  281 (356)
Q Consensus       206 ~~~~~~g~~~vv~~~~~~--~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  281 (356)
                      .++ ++|++.++++++..  ++...+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....    ......
T Consensus       217 ~~~-~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~  291 (361)
T cd08231         217 LAR-EFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPLD  291 (361)
T ss_pred             HHH-HcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----CccccC
Confidence            888 89999888876531  123567788776 99999999997 6789999999999999999975321    111233


Q ss_pred             hHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcC----CCccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          282 LMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREG----KVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g----~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ...++.+++++.++...+     .+.++++++++.++    .+.+.++++|+++++++|++.+.++.. +|+||+
T Consensus       292 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~  360 (361)
T cd08231         292 PERIVRKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVID  360 (361)
T ss_pred             HHHHhhcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeC
Confidence            445688899988886654     45577788888776    344567889999999999999988764 799885

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=2.6e-39  Score=297.72  Aligned_cols=324  Identities=23%  Similarity=0.280  Sum_probs=246.9

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCC---CCCCCCCCcceec-
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPD---FSSFTPGSPIEGF-   83 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~---~~p~v~G~e~~~~-   83 (356)
                      .++.+.+..+ .|.+.    .+...+.+.| .+.+++++|++.++++||.|+.+..++ ....   .+|.+++++..+. 
T Consensus         4 ~~~~~~~~~~-~~~~~----~~~~~~~~iP-~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~   77 (347)
T KOG1198|consen    4 KIRRVSLVSP-PGGGE----VLFSEEVPIP-EPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVV   77 (347)
T ss_pred             ccceEEEecc-CCCcc----eEEeecccCC-CCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCce
Confidence            3445555544 13332    3444677777 889999999999999999999988833 3344   5888888775333 


Q ss_pred             EEEEEec-CCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHc------C
Q 018404           84 GVAKVVD-SGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEIC------A  153 (356)
Q Consensus        84 G~V~~vG-~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~------~  153 (356)
                      |.+...| ..+..+..||.+...   |+|+||++++... ++++ |+++++. ++|++|.++.|||.++....      +
T Consensus        78 ~~~~~~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~-~~~~-P~~l~~~-~aa~~p~~~~tA~~al~~~~~~~~~~~  154 (347)
T KOG1198|consen   78 GAVESVGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKL-LVKI-PESLSFE-EAAALPLAALTALSALFQLAPGKRSKK  154 (347)
T ss_pred             eEEeccccccccceEeeeEEeeccCCCceeeEEEcchhh-ccCC-CCccChh-hhhcCchHHHHHHHHHHhccccccccc
Confidence            4444455 344557777777766   7999999999888 9999 9996666 78999999999999999988      8


Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      +++|++|||+||+|++|++++|+|+.+++..++++.++++.          +.++ ++|+++++||+++ ++.+.+++.+
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~----------~l~k-~lGAd~vvdy~~~-~~~e~~kk~~  222 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL----------ELVK-KLGADEVVDYKDE-NVVELIKKYT  222 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH----------HHHH-HcCCcEeecCCCH-HHHHHHHhhc
Confidence            99999999999999999999999999996555566677777          9999 9999999999997 9999999988


Q ss_pred             CCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhh---cceeeceeee-cchhhHHHHHH
Q 018404          234 PEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYK---RIRMEGFVVF-DYFPQYSRFLD  309 (356)
Q Consensus       234 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~l~  309 (356)
                      ++++|+||||+|+........++..+|+...++..+............. .....   ...+.+.... .+.....+.++
T Consensus       223 ~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  301 (347)
T KOG1198|consen  223 GKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQ-SANGIKLYSLGLKGVNYRWLYFVPSAEYLK  301 (347)
T ss_pred             CCCccEEEECCCCCccccchhhhccCCceEEEEeccccccccccccchh-hhhhhhheeeeeeccceeeeeecCCHHHHH
Confidence            5599999999999888899999999987666665443211111110000 01111   1111111111 11233478899


Q ss_pred             HHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEec
Q 018404          310 AVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       310 ~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      .+.+++.+|++++.+.+.||++++++|++.+.+++..||+++.+.
T Consensus       302 ~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  302 ALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             HHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            999999999999999999999999999999999999999999875

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.3e-38  Score=293.67  Aligned_cols=301  Identities=20%  Similarity=0.237  Sum_probs=252.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +.+    +.+  .++|.| .++++||+||+.++++|++|+..+.+......+|.++|||+  +|+|+++
T Consensus         1 m~a~~~~~~--~~~----~~~--~~~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~--~G~v~~v   69 (333)
T cd08296           1 YKAVQVTEP--GGP----LEL--VERDVP-LPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEV--VGRIDAV   69 (333)
T ss_pred             CeEEEEccC--CCC----ceE--EeccCC-CCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcce--eEEEEEE
Confidence            689999875  333    445  567777 78999999999999999999987764322235578999985  8999999


Q ss_pred             cCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCCCCccchhcccC
Q 018404           90 DSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILG  138 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~  138 (356)
                      |++++++++||+|++                               .|+|++|+.++... ++++ |++++.. +++.++
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~-~~~l-p~~~~~~-~aa~l~  146 (333)
T cd08296          70 GEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEA-LARI-PDDLDAA-EAAPLL  146 (333)
T ss_pred             CCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhh-eEeC-CCCCCHH-Hhhhhh
Confidence            999999999999985                               27899999999988 9999 9996554 577889


Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       139 ~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      +.++|||+++.. ..+.++++|+|+| +|++|++++++|+.+|++|++++++++++          +.++ ++|++++++
T Consensus       147 ~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~----------~~~~-~~g~~~~i~  213 (333)
T cd08296         147 CAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKA----------DLAR-KLGAHHYID  213 (333)
T ss_pred             hhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHH----------HHHH-HcCCcEEec
Confidence            999999999965 4899999999999 89999999999999999999999998888          8888 999999998


Q ss_pred             cCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceee
Q 018404          219 YKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV  297 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (356)
                      +.+. ++.+.+.+.  +++|++||+.|. ..+..++++++++|+++.+|....      ..+.+...++.+++++.++..
T Consensus       214 ~~~~-~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~  284 (333)
T cd08296         214 TSKE-DVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPS  284 (333)
T ss_pred             CCCc-cHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCc
Confidence            8775 677777665  369999999974 788999999999999999997542      122345566789999888765


Q ss_pred             ecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          298 FDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       298 ~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ..     ...++.++++++++++++.+ ..|+++++.+|++.+.+++..||+|++
T Consensus       285 ~~-----~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         285 GT-----ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             CC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            43     46788888999999998775 479999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=5.8e-39  Score=295.27  Aligned_cols=288  Identities=14%  Similarity=0.168  Sum_probs=220.9

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecC-HHhhhhhccCC-C-C-CCCCCCCCCcceecE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCD-PYMRARMSFNQ-D-P-DFSSFTPGSPIEGFG   84 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~-~~d~~~~~~~~-~-~-~~~p~v~G~e~~~~G   84 (356)
                      ++||+++..+     .  ++++  .+.|.| +++++||+|||.+++|| .+|++.+.+.. . . ..+|.++|||+  +|
T Consensus         1 ~~ka~~~~~~-----~--~l~~--~e~~~p-~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~--~G   68 (308)
T TIGR01202         1 KTQAIVLSGP-----N--QIEL--REVTLT-PPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYES--VG   68 (308)
T ss_pred             CceEEEEeCC-----C--eEEE--EEecCC-CCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCccee--EE
Confidence            4788988653     2  3455  456666 78999999999999997 58988766322 1 1 35689999995  99


Q ss_pred             EEEEecCCCCCCCCCCEEEE------------ccccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHc
Q 018404           85 VAKVVDSGHPEFKKGDLVWG------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEIC  152 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~  152 (356)
                      +|+++|+++ +|++||+|+.            .|+|+||++++++. ++++ |++++.  +++.+ ..+.|||+++.. .
T Consensus        69 ~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~-~~~i-p~~~~~--~~a~~-~~~~~a~~~~~~-~  141 (308)
T TIGR01202        69 RVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASR-VCRL-DPALGP--QGALL-ALAATARHAVAG-A  141 (308)
T ss_pred             EEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHH-ceeC-CCCCCH--HHHhh-hHHHHHHHHHHh-c
Confidence            999999998 5999999985            48999999999998 9999 888543  44444 457899999965 3


Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEE-EEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVV-GSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR  231 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  231 (356)
                       ..++++|+|+| +|++|++++|+|+.+|++++ +++..++++          +.+. .+   .++|+.+  .       
T Consensus       142 -~~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl----------~~a~-~~---~~i~~~~--~-------  196 (308)
T TIGR01202       142 -EVKVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRR----------DGAT-GY---EVLDPEK--D-------  196 (308)
T ss_pred             -ccCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHH----------Hhhh-hc---cccChhh--c-------
Confidence             34688999998 79999999999999999754 454454454          4444 32   3454422  1       


Q ss_pred             hCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHH
Q 018404          232 CFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDA  310 (356)
Q Consensus       232 ~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  310 (356)
                       .++++|++|||+|+ ..+..++++++++|+++.+|.....      ...+...++.+++++.+.....     .+++++
T Consensus       197 -~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~  264 (308)
T TIGR01202       197 -PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEP------VNFDFVPAFMKEARLRIAAEWQ-----PGDLHA  264 (308)
T ss_pred             -cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCC------cccccchhhhcceEEEEecccc-----hhHHHH
Confidence             12379999999999 5789999999999999999974321      1234445677888877654433     567999


Q ss_pred             HHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          311 VLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       311 ~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      +++++++|++++  .+++.|+|+++++||+.+.++...+|++++
T Consensus       265 ~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       265 VRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             HHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            999999999985  588999999999999998877777899873

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.1e-38  Score=297.57  Aligned_cols=291  Identities=16%  Similarity=0.119  Sum_probs=224.3

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCC----CCCCCCCCCCcceecE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD----PDFSSFTPGSPIEGFG   84 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~----~~~~p~v~G~e~~~~G   84 (356)
                      .+++++++.+     .  ++++  .++|.| + +++||+|||.++|||++|++.+++...    ...+|.++|||+  +|
T Consensus         2 ~~~~~~~~~~-----~--~~~~--~~~~~P-~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~--~G   68 (341)
T cd08237           2 INQVYRLVRP-----K--FFEV--TYEEEN-L-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEG--IG   68 (341)
T ss_pred             cccceEEecc-----c--eEEE--eecCCC-C-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeecccee--EE
Confidence            4678888664     2  2445  566666 5 899999999999999999998874321    134689999995  89


Q ss_pred             EEEEecCCCCCCCCCCEEEEc---------------------------cccceeEeecCCCcceeecCCCCCccchhccc
Q 018404           85 VAKVVDSGHPEFKKGDLVWGT---------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGIL  137 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l  137 (356)
                      +|+++|.+  +|++||+|+..                           |+|+||+++++++ ++++ |+++++  +.|++
T Consensus        69 ~V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~v-P~~l~~--~~aa~  142 (341)
T cd08237          69 VVVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDR-LVKL-PDNVDP--EVAAF  142 (341)
T ss_pred             EEEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHH-eEEC-CCCCCh--HHhhh
Confidence            99998764  79999999752                           7899999999999 9999 999544  45567


Q ss_pred             CcchHHHHHHHHHH--cCCCCCCEEEEecCCchHHHHHHHHHHH-cC-CEEEEEeCCcchhccccchhHHHHHHHhhcCC
Q 018404          138 GMPGMTAWAGFYEI--CAPKKGEYIYVSAASGAVGQLVGQFAKL-MG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGF  213 (356)
Q Consensus       138 ~~~~~tA~~~l~~~--~~~~~g~~VlI~ga~g~vG~~ai~la~~-~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~  213 (356)
                      ..++++||+++...  ..+++|++|+|+| +|++|++++|+++. +| ++|++++++++++          +.++ +++.
T Consensus       143 ~~~~~~a~~a~~~~~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~----------~~a~-~~~~  210 (341)
T cd08237         143 TELVSVGVHAISRFEQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKL----------DLFS-FADE  210 (341)
T ss_pred             hchHHHHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHH----------HHHh-hcCc
Confidence            77899999998643  3568899999999 69999999999996 55 5899999998888          8887 6655


Q ss_pred             CEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc----hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhh
Q 018404          214 DDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYK  288 (356)
Q Consensus       214 ~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  288 (356)
                      +..++     ++.       .+ ++|+||||+|+    ..+..++++++++|+++.+|....      ....+...++.+
T Consensus       211 ~~~~~-----~~~-------~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k  272 (341)
T cd08237         211 TYLID-----DIP-------EDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEK  272 (341)
T ss_pred             eeehh-----hhh-------hccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhC
Confidence            43221     111       12 69999999994    478999999999999999996432      123445667889


Q ss_pred             cceeeceeeecchhhHHHHHHHHHHHHHcC-----CCccceeeeeCCC---cHHHHHHHHHcCCCcceEEEEec
Q 018404          289 RIRMEGFVVFDYFPQYSRFLDAVLPYIREG-----KVVYVEDVADGLE---NAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g-----~l~~~i~~~~~l~---~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      ++++.++....     .++++++++++.+|     .+++.+++.|+++   ++.+|++.+.++ ..||+|+.+.
T Consensus       273 ~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         273 GLTLVGSSRST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             ceEEEEecccC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence            99988875543     45788999999998     5777889999986   455555555444 6799999874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=4.5e-38  Score=292.98  Aligned_cols=310  Identities=18%  Similarity=0.210  Sum_probs=248.1

Q ss_pred             cEEEEeec-ccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           11 KQVILKNY-VEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        11 ~a~~~~~~-~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      ||+++.++ +.|.|.    .++..++|.| +++++||+|||.++++|+.|+...........+|.++|+|+  +|+|+++
T Consensus         1 ~~~~~~~~~~~~~~~----~~~~~~~~~p-~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~--~G~V~~v   73 (336)
T TIGR02817         1 KAVGYKKPLPITDPD----ALVDIDLPKP-KPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDA--AGVVVAV   73 (336)
T ss_pred             CceeeccccCCCCcc----cceecccCCC-CCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceee--EEEEEEe
Confidence            57788774 113343    4555677888 88999999999999999999987764333344578999885  8999999


Q ss_pred             cCCCCCCCCCCEEEEc------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCC-----CC
Q 018404           90 DSGHPEFKKGDLVWGT------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKK-----GE  158 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~-----g~  158 (356)
                      |++++++++||+|+++      |+|++|++++.+. ++++ |++++.. ++++++++++|||+++....++.+     |+
T Consensus        74 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~  150 (336)
T TIGR02817        74 GDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERI-VGHK-PKSLSFA-EAAALPLTSITAWELLFDRLGINDPVAGDKR  150 (336)
T ss_pred             CCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHH-cccC-CCCCCHH-HHhhhhHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence            9999999999999985      7899999999998 9999 9996555 688899999999999988888887     99


Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|+|+|++|++|++++|+|+.+ |++|+++++++++.          +.++ ++|+++++++..  ++.+.+++..++++
T Consensus       151 ~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~----------~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~v  217 (336)
T TIGR02817       151 ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQ----------EWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAV  217 (336)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHH----------HHHH-HcCCCEEEECCC--CHHHHHHHhcCCCC
Confidence            9999999999999999999998 99999999998888          8888 899999998654  67777777544489


Q ss_pred             cEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeec---c--hhhH--HHHHH
Q 018404          238 DIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFD---Y--FPQY--SRFLD  309 (356)
Q Consensus       238 d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~--~~~l~  309 (356)
                      |+++|++|+ .....++++++++|+++.++...         ..+...+..+++++.+.....   +  +...  ...++
T Consensus       218 d~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (336)
T TIGR02817       218 SYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLN  288 (336)
T ss_pred             CEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHH
Confidence            999999865 78899999999999999885321         122233444556665533321   1  1111  25688


Q ss_pred             HHHHHHHcCCCccceeeee---CCCcHHHHHHHHHcCCCcceEEEE
Q 018404          310 AVLPYIREGKVVYVEDVAD---GLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       310 ~~~~~~~~g~l~~~i~~~~---~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ++++++.+|.+++.+...+   +++++++|++.+.+++..||+|+.
T Consensus       289 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       289 RVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            8999999999987766655   468999999999999888998874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=5.8e-38  Score=298.46  Aligned_cols=317  Identities=19%  Similarity=0.229  Sum_probs=256.1

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCC----------CCCCCCC
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD----------PDFSSFT   75 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~----------~~~~p~v   75 (356)
                      .|.+|+|+++.....|.|. ..  ++..++|.| .++++||+||+.+++||.+|+........          ...++.+
T Consensus         9 ~~~~~~a~~~~~~~~g~~~-~~--~~~~~~~~p-~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~   84 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPA-QA--IQLEDVPVP-ELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHI   84 (393)
T ss_pred             CchhhhheeeecccCCCcc-cc--eEEeecCCC-CCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccc
Confidence            4678999998643236552 22  444666777 78999999999999999999876542110          0123358


Q ss_pred             CCCcceecEEEEEecCCCCCCCCCCEEEEc-------------------------------cccceeEeecCCCcceeec
Q 018404           76 PGSPIEGFGVAKVVDSGHPEFKKGDLVWGT-------------------------------TGWEEYSLIKNPQGLFKIH  124 (356)
Q Consensus        76 ~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~l~~~~  124 (356)
                      +|||+  +|+|+++|++++.+++||+|++.                               |+|++|++++... ++++ 
T Consensus        85 ~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~-l~~i-  160 (393)
T cd08246          85 GGSDA--SGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQ-LMPK-  160 (393)
T ss_pred             cccce--EEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHH-eEEC-
Confidence            99995  89999999999999999999864                               7899999999988 9999 


Q ss_pred             CCCCCccchhcccCcchHHHHHHHHHH--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhH
Q 018404          125 HTDVPLSYYTGILGMPGMTAWAGFYEI--CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQ  202 (356)
Q Consensus       125 p~~~~~~~~~a~l~~~~~tA~~~l~~~--~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~  202 (356)
                      |++++.. +++.+++.+.|||+++...  ++++++++|+|+|++|++|++++++|+.+|++++++++++++.        
T Consensus       161 P~~l~~~-~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~--------  231 (393)
T cd08246         161 PKHLSWE-EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKA--------  231 (393)
T ss_pred             CCCCCHH-HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHH--------
Confidence            9996554 5778899999999998655  6789999999999899999999999999999999999999988        


Q ss_pred             HHHHHHhhcCCCEEEecCCcc---------------------cHHHHHHHhCCC--CccEEEeCCCchHHHHHHHhhccC
Q 018404          203 LVELLKNKFGFDDAFNYKEEN---------------------DLDAALKRCFPE--GIDIYFEHVGGKMLDAVLLNMRLH  259 (356)
Q Consensus       203 ~~~~~~~~~g~~~vv~~~~~~---------------------~~~~~~~~~~~~--~~d~vid~~g~~~~~~~~~~l~~~  259 (356)
                        +.++ ++|+++++++++.+                     .+.+.+.+.+++  ++|++|||+|+..+..++++++++
T Consensus       232 --~~~~-~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~  308 (393)
T cd08246         232 --EYCR-ALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRG  308 (393)
T ss_pred             --HHHH-HcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccC
Confidence              8888 89999888864320                     245667777765  799999999998899999999999


Q ss_pred             CeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHH
Q 018404          260 GRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVG  339 (356)
Q Consensus       260 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~  339 (356)
                      |+++.+|.....+     ...+...++.++.++.+.....     .+.+.+++++++++.+.+.+++.|+++++++|++.
T Consensus       309 G~~v~~g~~~~~~-----~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~  378 (393)
T cd08246         309 GMVVICAGTTGYN-----HTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQL  378 (393)
T ss_pred             CEEEEEcccCCCC-----CCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHH
Confidence            9999998744321     1234455666777777765544     45788899999999998778889999999999999


Q ss_pred             HHcC-CCcceEEEE
Q 018404          340 LFSG-RNVGKQLVV  352 (356)
Q Consensus       340 ~~~~-~~~gk~vv~  352 (356)
                      +.++ +..||+|+-
T Consensus       379 ~~~~~~~~gkvvv~  392 (393)
T cd08246         379 MHRNQHHVGNMAVL  392 (393)
T ss_pred             HHhCccccceEEEe
Confidence            9988 788998874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=2.6e-37  Score=286.15  Aligned_cols=314  Identities=22%  Similarity=0.276  Sum_probs=259.6

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCC---CCCCCCCCCCcceecEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD---PDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~---~~~~p~v~G~e~~~~G~V   86 (356)
                      |||++++++  +.+.  .+.+  .+.+.| .+.+++|+||+.++++|++|+....+...   ....|.++|||+  +|+|
T Consensus         1 ~~a~~~~~~--~~~~--~~~~--~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~--~G~v   71 (324)
T cd08244           1 MRAIRLHEF--GPPE--VLVP--EDVPDP-VPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEV--AGVV   71 (324)
T ss_pred             CeEEEEcCC--CCcc--ceEE--eccCCC-CCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccce--EEEE
Confidence            689999876  5553  3444  455555 67899999999999999999887653211   234568899985  8999


Q ss_pred             EEecCCCCCCCCCCEEEEc-----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEE
Q 018404           87 KVVDSGHPEFKKGDLVWGT-----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIY  161 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~Vl  161 (356)
                      +++|+++..+++||+|+++     |+|++|+.++... ++++ |++++.. +++++++.++|||. +....+++++++|+
T Consensus        72 ~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~a~~~~~~~~ta~~-~~~~~~~~~~~~vl  147 (324)
T cd08244          72 DAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDS-LHPV-PDGLDLE-AAVAVVHDGRTALG-LLDLATLTPGDVVL  147 (324)
T ss_pred             EEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHH-eEeC-CCCCCHH-HHhhhcchHHHHHH-HHHhcCCCCCCEEE
Confidence            9999999999999999984     7999999999988 9999 9996555 57789999999964 44668899999999


Q ss_pred             EecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEE
Q 018404          162 VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIY  240 (356)
Q Consensus       162 I~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~v  240 (356)
                      |+|++|++|++++++|+.+|++|+++++++++.          +.++ ++|++.++++.+. ++.+.+.+.+++ ++|++
T Consensus       148 I~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~v  215 (324)
T cd08244         148 VTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKT----------ALVR-ALGADVAVDYTRP-DWPDQVREALGGGGVTVV  215 (324)
T ss_pred             EEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HcCCCEEEecCCc-cHHHHHHHHcCCCCceEE
Confidence            999999999999999999999999999998888          8887 8999888888775 777888887776 89999


Q ss_pred             EeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHHHHHcCC
Q 018404          241 FEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       241 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~g~  319 (356)
                      +||+|+.....++++++++|+++.+|.....+     ...+....+.+++++.++..... +....+.++++++++.+++
T Consensus       216 l~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  290 (324)
T cd08244         216 LDGVGGAIGRAALALLAPGGRFLTYGWASGEW-----TALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGR  290 (324)
T ss_pred             EECCChHhHHHHHHHhccCcEEEEEecCCCCC-----CccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCC
Confidence            99999988899999999999999998754321     12233455688888887766443 3344678888999999999


Q ss_pred             CccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          320 VVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       320 l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +.+.+...|+++++++|++.+.+++..||+|+++
T Consensus       291 l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         291 LVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             ccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9877878899999999999999999999999863

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1.3e-37  Score=290.48  Aligned_cols=317  Identities=24%  Similarity=0.280  Sum_probs=257.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCC-CeEEEEEEEeecCHHhhhhhccCCCC-CC----CCCCCCCcceec
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGS-NAILVKNLYLSCDPYMRARMSFNQDP-DF----SSFTPGSPIEGF   83 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~-~evlV~v~~~~i~~~d~~~~~~~~~~-~~----~p~v~G~e~~~~   83 (356)
                      |||+++.++  |.|. +.+.+  .++|.| .+.+ ++|+||+.++++|+.|+....+.... ..    +|.++|||+  +
T Consensus         1 ~~a~~~~~~--~~~~-~~~~~--~~~~~p-~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~--~   72 (341)
T cd08290           1 AKALVYTEH--GEPK-EVLQL--ESYEIP-PPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEG--V   72 (341)
T ss_pred             CceEEEccC--CCch-hheEE--eecCCC-CCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcce--E
Confidence            789999887  6652 33555  456666 5666 99999999999999999877632211 12    567999985  8


Q ss_pred             EEEEEecCCCCCCCCCCEEEEc----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCE
Q 018404           84 GVAKVVDSGHPEFKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEY  159 (356)
Q Consensus        84 G~V~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~  159 (356)
                      |+|+++|+++..+++||+|++.    |+|++|+.++.+. ++++ |++++.. +++++++.+.|||+++.....+++|++
T Consensus        73 G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~  149 (341)
T cd08290          73 GEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADD-LIKV-PNDVDPE-QAATLSVNPCTAYRLLEDFVKLQPGDW  149 (341)
T ss_pred             EEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHH-eEeC-CCCCCHH-HHHHhhccHHHHHHHHHhhcccCCCCE
Confidence            9999999999999999999986    8999999999988 9999 9996554 688889999999999987788999999


Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCc----chhccccchhHHHHHHHhhcCCCEEEecCCc--ccHHHHHHHhC
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR----EKVWLIPMQSQLVELLKNKFGFDDAFNYKEE--NDLDAALKRCF  233 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~~~~~~  233 (356)
                      |+|+|++|++|++++|+|+.+|++++++++++    ++.          +.++ ++|+++++++...  .++.+.++..+
T Consensus       150 vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~  218 (341)
T cd08290         150 VIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELK----------ERLK-ALGADHVLTEEELRSLLATELLKSAP  218 (341)
T ss_pred             EEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHH----------HHHH-hcCCCEEEeCcccccccHHHHHHHHc
Confidence            99999999999999999999999999999876    445          7777 8999999887651  04566677665


Q ss_pred             CCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-----hhhHHHHH
Q 018404          234 PEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-----FPQYSRFL  308 (356)
Q Consensus       234 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l  308 (356)
                      ++++|++|||+|+..+..++++++++|+++.+|.....     ....+....+.+++++.+.....+     +......+
T Consensus       219 ~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (341)
T cd08290         219 GGRPKLALNCVGGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDML  293 (341)
T ss_pred             CCCceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHH
Confidence            55799999999998888899999999999999864321     112334456788899888776532     23445578


Q ss_pred             HHHHHHHHcCCCccceeeee---CCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          309 DAVLPYIREGKVVYVEDVAD---GLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       309 ~~~~~~~~~g~l~~~i~~~~---~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +.+++++.+|.+.+.+...+   +++++++|++.+.++...||+|+++
T Consensus       294 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         294 EELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            88999999999988766677   9999999999999999889999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-37  Score=286.43  Aligned_cols=319  Identities=23%  Similarity=0.297  Sum_probs=260.2

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc-CCCCCCCCCCCCCcceecEEEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF-NQDPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~-~~~~~~~p~v~G~e~~~~G~V~   87 (356)
                      +|||+++.++  |.+.  .+.++  +.+.| ++.+++|+|||.++++|+.|+..... .......|.++|||+  +|+|+
T Consensus         1 ~m~a~~~~~~--~~~~--~~~~~--~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~--~G~v~   71 (334)
T PTZ00354          1 MMRAVTLKGF--GGVD--VLKIG--ESPKP-APKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEV--AGYVE   71 (334)
T ss_pred             CcEEEEEEec--CCCc--ceEEE--eCCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceee--EEEEE
Confidence            5899999987  6553  34454  44555 78899999999999999999877652 222233457899985  89999


Q ss_pred             EecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEec
Q 018404           88 VVDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSA  164 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~g  164 (356)
                      ++|+++.++++||+|+++   |+|++|++++.+. ++++ |++++.. +++.++.++.+||+++...+.+++|++|+|+|
T Consensus        72 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~g  148 (334)
T PTZ00354         72 DVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGH-VMHI-PQGYTFE-EAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHA  148 (334)
T ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEEecHHH-cEeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence            999999999999999997   7999999999988 9999 9985554 57788999999999998878999999999999


Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCccc-HHHHHHHhCCC-CccEEEe
Q 018404          165 ASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEND-LDAALKRCFPE-GIDIYFE  242 (356)
Q Consensus       165 a~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-~~~~~~~~~~~-~~d~vid  242 (356)
                      ++|++|++++++|+.+|++++.+++++++.          +.++ ++|.+.++++... + +.+.+++.+++ ++|++||
T Consensus       149 a~g~~g~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~  216 (334)
T PTZ00354        149 GASGVGTAAAQLAEKYGAATIITTSSEEKV----------DFCK-KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLD  216 (334)
T ss_pred             CCchHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEE
Confidence            999999999999999999988899898888          8887 8999888887664 4 77788888766 9999999


Q ss_pred             CCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-----hhhHHHHHHHHHHHHHc
Q 018404          243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-----FPQYSRFLDAVLPYIRE  317 (356)
Q Consensus       243 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~  317 (356)
                      |+|+..+..++++|+++|+++.+|...+.+.    ...+...++.+++++.+......     +....+.++++++++++
T Consensus       217 ~~~~~~~~~~~~~l~~~g~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (334)
T PTZ00354        217 CVGGSYLSETAEVLAVDGKWIVYGFMGGAKV----EKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEE  292 (334)
T ss_pred             CCchHHHHHHHHHhccCCeEEEEecCCCCcc----cccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHC
Confidence            9999999999999999999999986433211    11344445667667777654432     12223566888899999


Q ss_pred             CCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          318 GKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       318 g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      +.+.+.+...+++++++++++.+.+++..||+|+.+.+
T Consensus       293 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~  330 (334)
T PTZ00354        293 GEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE  330 (334)
T ss_pred             CCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            99988777889999999999999988888999998754

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=2.1e-37  Score=291.72  Aligned_cols=310  Identities=21%  Similarity=0.286  Sum_probs=252.7

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~   87 (356)
                      |+|||+++.++  |.+    ++++  +++.| ++++++|+||+.++++|++|++...+... ..+|.++|||+  +|+|+
T Consensus         1 ~~~~a~~~~~~--~~~----~~~~--~~~~p-~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~--~G~V~   68 (365)
T cd08278           1 MKTTAAVVREP--GGP----FVLE--DVELD-DPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEG--AGVVE   68 (365)
T ss_pred             CccEEeeeccC--CCc----ceEE--EeecC-CCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccce--eEEEE
Confidence            47899999886  544    4554  55556 78999999999999999999988763322 34578999985  89999


Q ss_pred             EecCCCCCCCCCCEEEE----------------------------------------------------ccccceeEeec
Q 018404           88 VVDSGHPEFKKGDLVWG----------------------------------------------------TTGWEEYSLIK  115 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~----------------------------------------------------~g~~~~~~~v~  115 (356)
                      ++|+++.++++||+|++                                                    .|+|++|++++
T Consensus        69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~  148 (365)
T cd08278          69 AVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVH  148 (365)
T ss_pred             EeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEec
Confidence            99999999999999983                                                    27899999999


Q ss_pred             CCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchh
Q 018404          116 NPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKV  194 (356)
Q Consensus       116 ~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~  194 (356)
                      ++. ++++ |++++.. +++.+++.++||+.++.....++++++|+|+| +|++|++++|+|+.+|+ +++++++++++.
T Consensus       149 ~~~-~~~i-P~~~s~~-~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~  224 (365)
T cd08278         149 ERN-VVKV-DKDVPLE-LLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRL  224 (365)
T ss_pred             chh-EEEC-CCCCCHH-HhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            998 9999 9996554 57889999999999988888899999999997 69999999999999999 688888888887


Q ss_pred             ccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCC
Q 018404          195 WLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNL  273 (356)
Q Consensus       195 ~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  273 (356)
                                +.++ ++|++.++++.+. ++.+.+.+.+++++|++|||+|+ ..+..++++++++|+++.+|.....  
T Consensus       225 ----------~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--  290 (365)
T cd08278         225 ----------ELAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPG--  290 (365)
T ss_pred             ----------HHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCC--
Confidence                      7777 8999999988775 78888888773499999999997 7889999999999999999974321  


Q ss_pred             CCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc-ceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          274 SQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY-VEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~-~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                        .....+...++.+++++.++.....  ...+.++++++++++|.+.+ .+...|+++++++|++.+.++... |+|++
T Consensus       291 --~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         291 --AEVTLDVNDLLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             --CccccCHHHHhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence              1122345555578888887765432  11467788999999999864 344579999999999999887654 77763

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.4e-37  Score=289.63  Aligned_cols=306  Identities=20%  Similarity=0.243  Sum_probs=249.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC--------------------CC
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ--------------------DP   69 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~--------------------~~   69 (356)
                      ||++++.++  +.+.  .+.+.+ .++.| ++.+++|+|||.++++|++|+....+..                    ..
T Consensus         1 ~~a~~~~~~--~~~~--~~~~~~-~~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   74 (350)
T cd08274           1 MRAVLLTGH--GGLD--KLVYRD-DVPVP-TPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGT   74 (350)
T ss_pred             CeEEEEecc--CCcc--ceeecc-cCCCC-CCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCC
Confidence            678888776  5553  344432 34555 6789999999999999999998765221                    13


Q ss_pred             CCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc----------------------cccceeEeecCCCcceeecCCC
Q 018404           70 DFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT----------------------TGWEEYSLIKNPQGLFKIHHTD  127 (356)
Q Consensus        70 ~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~----------------------g~~~~~~~v~~~~~l~~~~p~~  127 (356)
                      ..+|.++|||+  +|+|+++|++++++++||+|++.                      |+|++|+.++... ++++ |++
T Consensus        75 ~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~  150 (350)
T cd08274          75 LSFPRIQGADI--VGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAEN-AYPV-NSP  150 (350)
T ss_pred             CCCCcccCCcc--eEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHH-ceeC-CCC
Confidence            44678999995  89999999999999999999872                      7899999999988 9999 998


Q ss_pred             CCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHH
Q 018404          128 VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELL  207 (356)
Q Consensus       128 ~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~  207 (356)
                      ++.. +++++++.+.|||+++ ....+.+|++|+|+|++|++|++++++|+.+|++|++++++. +.          +.+
T Consensus       151 ~~~~-~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~----------~~~  217 (350)
T cd08274         151 LSDV-ELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KE----------EAV  217 (350)
T ss_pred             CCHH-HHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hh----------HHH
Confidence            6554 5788999999999998 668899999999999889999999999999999999998765 66          888


Q ss_pred             HhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH
Q 018404          208 KNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV  286 (356)
Q Consensus       208 ~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  286 (356)
                      + ++|++.+++.... .+.+  ...+.+ ++|++|||+|+..+..++++++++|+++.+|.....     ....+...++
T Consensus       218 ~-~~g~~~~~~~~~~-~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~  288 (350)
T cd08274         218 R-ALGADTVILRDAP-LLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGP-----VVELDLRTLY  288 (350)
T ss_pred             H-hcCCeEEEeCCCc-cHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCc-----cccCCHHHhh
Confidence            7 8998766655443 3333  444555 899999999999999999999999999999864221     1223455667


Q ss_pred             hhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          287 YKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      .+++++.++....     .+.++++++++.++++++.+.+.++++++++|++.+.++...||+|+.
T Consensus       289 ~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         289 LKDLTLFGSTLGT-----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             hcceEEEEeecCC-----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence            7888888876643     567899999999999988788889999999999999988888999885

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2.9e-37  Score=286.56  Aligned_cols=315  Identities=20%  Similarity=0.194  Sum_probs=252.9

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      +||++++.++  |.|.  .  ++..+++.| +++++||+||+.++++|++|+...........+|.++|||+  +|+|+.
T Consensus         1 ~~~~~~~~~~--~~~~--~--~~~~~~~~~-~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~--~G~v~~   71 (327)
T PRK10754          1 MAKRIEFHKH--GGPE--V--LQAVEFTPA-DPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEA--AGVVSK   71 (327)
T ss_pred             CceEEEEecc--CChh--H--eEEeeccCC-CCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcce--EEEEEE
Confidence            4899999988  7774  4  444566667 78999999999999999999987653322334578899984  899999


Q ss_pred             ecCCCCCCCCCCEEEEc----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEec
Q 018404           89 VDSGHPEFKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSA  164 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~g  164 (356)
                      +|++++.+++||+|++.    |+|++|+.++.+. ++++ |++++.. +++.+++.+.+||.++...+.+.+|++|+|+|
T Consensus        72 vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~-~~~l-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g  148 (327)
T PRK10754         72 VGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADK-AAIL-PDAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHA  148 (327)
T ss_pred             eCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHH-ceeC-CCCCCHH-HHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEe
Confidence            99999999999999865    7899999999988 9999 9985554 57778889999999998888899999999999


Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeC
Q 018404          165 ASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEH  243 (356)
Q Consensus       165 a~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~  243 (356)
                      ++|++|++++++|+.+|++|+++++++++.          +.++ ++|++++++.++. ++.+.+++.+++ ++|++|||
T Consensus       149 ~~g~ig~~~~~lak~~G~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~  216 (327)
T PRK10754        149 AAGGVGLIACQWAKALGAKLIGTVGSAQKA----------QRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDS  216 (327)
T ss_pred             CCcHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEEC
Confidence            999999999999999999999999998888          8887 8999888988775 788888888887 99999999


Q ss_pred             CCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcce-eeceeee---cchhhHHHHHHHHHHHHHcCC
Q 018404          244 VGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIR-MEGFVVF---DYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       244 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      +|+..+..++++++++|+++.+|.....     ........+..++.. .......   ..++...+.+..+++++.+|.
T Consensus       217 ~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  291 (327)
T PRK10754        217 VGKDTWEASLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGV  291 (327)
T ss_pred             CcHHHHHHHHHHhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCC
Confidence            9998889999999999999999975421     011122222222211 1111111   112234456778999999999


Q ss_pred             Cccc--eeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          320 VVYV--EDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       320 l~~~--i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      +++.  +.+.|+++++.+|++.+.+++..+|+|+.
T Consensus       292 l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        292 IKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             eeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence            9854  46789999999999999999999999985

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=3.3e-37  Score=286.26  Aligned_cols=322  Identities=48%  Similarity=0.774  Sum_probs=258.3

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC---CCCCCCCCCCCcceecEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ---DPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~---~~~~~p~v~G~e~~~~G~   85 (356)
                      ++|||++...+.|+|.++.+.++.  +|.| ++++++|+||+.++++|+.|+.......   .+...+.++|+|  ++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e--~~G~   75 (329)
T cd05288           1 SNRQVVLAKRPEGPPPPDDFELVE--VPLP-ELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGG--GVGE   75 (329)
T ss_pred             CCcEEEEeccCCCCCCccceeEEe--ccCC-CCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCc--eEEE
Confidence            368999999877766767777754  5556 7899999999999999998865444211   111234678988  5899


Q ss_pred             EEEecCCCCCCCCCCEEEEccccceeEeecC-CCcceeecCCCCC--ccchhcccCcchHHHHHHHHHHcCCCCCCEEEE
Q 018404           86 AKVVDSGHPEFKKGDLVWGTTGWEEYSLIKN-PQGLFKIHHTDVP--LSYYTGILGMPGMTAWAGFYEICAPKKGEYIYV  162 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~l~~~~p~~~~--~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI  162 (356)
                      |+++|++  ++++||+|+++++|++|+.++. +. ++++ |++++  +..+++++++++.|||+++.....+.++++|+|
T Consensus        76 V~~~G~~--~~~~Gd~V~~~~~~~~~~~v~~~~~-~~~l-P~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI  151 (329)
T cd05288          76 VVESRSP--DFKVGDLVSGFLGWQEYAVVDGASG-LRKL-DPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVV  151 (329)
T ss_pred             EEecCCC--CCCCCCEEecccceEEEEEecchhh-cEEC-CcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEE
Confidence            9999964  7999999999999999999999 88 9999 99853  221234489999999999988788999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhh-cCCCEEEecCCcccHHHHHHHhCCCCccEEE
Q 018404          163 SAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNK-FGFDDAFNYKEENDLDAALKRCFPEGIDIYF  241 (356)
Q Consensus       163 ~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vi  241 (356)
                      +|++|++|++++|+++.+|++|+++++++++.          +.++ + +|++.++++.+. ++.+.+.+.+++++|++|
T Consensus       152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~----------~~~~-~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi  219 (329)
T cd05288         152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKC----------RWLV-EELGFDAAINYKTP-DLAEALKEAAPDGIDVYF  219 (329)
T ss_pred             ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-hhcCCceEEecCCh-hHHHHHHHhccCCceEEE
Confidence            99999999999999999999999999998887          8888 6 999889988775 777788877756899999


Q ss_pred             eCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc
Q 018404          242 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV  321 (356)
Q Consensus       242 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~  321 (356)
                      ||+|+..+..++++++++|+++.+|..............+....+.+++++.++....+.....+.+.++++++.+|.++
T Consensus       220 ~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  299 (329)
T cd05288         220 DNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLK  299 (329)
T ss_pred             EcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcc
Confidence            99999999999999999999999987543211100001234556778888888766544334456788899999999998


Q ss_pred             cceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          322 YVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       322 ~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      +.....++++++.++++.+.+++..||+|+
T Consensus       300 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         300 YREDVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             ccccccccHHHHHHHHHHHhcCCCccceeC
Confidence            766667899999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=2.5e-37  Score=288.48  Aligned_cols=302  Identities=23%  Similarity=0.246  Sum_probs=250.8

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC---CCCCCCCCCCCcceecEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ---DPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~---~~~~~p~v~G~e~~~~G~V   86 (356)
                      |||+++.++  |++    +.+  .+++.| ++++++|+||+.++++|++|+....+..   ....+|.++|||+  +|+|
T Consensus         1 ~ka~~~~~~--~~~----~~~--~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~--~G~V   69 (340)
T cd05284           1 MKAARLYEY--GKP----LRL--EDVPVP-EPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHEN--AGWV   69 (340)
T ss_pred             CeeeEeccC--CCC----ceE--EeCCCC-CCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccce--eEEE
Confidence            689999886  554    455  456666 7899999999999999999998766321   2445578999985  8999


Q ss_pred             EEecCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhcc
Q 018404           87 KVVDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGI  136 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~  136 (356)
                      .++|+++.++++||+|+++                              |+|++|+.++.+. ++++ |++++.. ++++
T Consensus        70 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-P~~ls~~-~aa~  146 (340)
T cd05284          70 EEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRR-LVKL-PRGLDPV-EAAP  146 (340)
T ss_pred             EEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHH-eEEC-CCCCCHH-Hhhh
Confidence            9999999999999999864                              6899999999998 9999 9995544 6888


Q ss_pred             cCcchHHHHHHHHHH-cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCC
Q 018404          137 LGMPGMTAWAGFYEI-CAPKKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD  214 (356)
Q Consensus       137 l~~~~~tA~~~l~~~-~~~~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  214 (356)
                      ++..++|||+++... ..+.++++|+|+| +|++|++++|+|+.+| ++|+++++++++.          +.++ ++|++
T Consensus       147 l~~~~~ta~~~l~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~----------~~~~-~~g~~  214 (340)
T cd05284         147 LADAGLTAYHAVKKALPYLDPGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEAL----------KLAE-RLGAD  214 (340)
T ss_pred             hcchHHHHHHHHHHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHH----------HHHH-HhCCc
Confidence            999999999999776 4688999999999 6679999999999999 7999999998888          8887 99999


Q ss_pred             EEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhccee
Q 018404          215 DAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRM  292 (356)
Q Consensus       215 ~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (356)
                      +++++++  .+.+++++.+++ ++|+++||+|+ ..+..++++|+++|+++.+|.....       .......+.+++++
T Consensus       215 ~~~~~~~--~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~-------~~~~~~~~~~~~~~  285 (340)
T cd05284         215 HVLNASD--DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHG-------RLPTSDLVPTEISV  285 (340)
T ss_pred             EEEcCCc--cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCC-------ccCHHHhhhcceEE
Confidence            9988876  377778887776 89999999997 7889999999999999999864321       12233345788888


Q ss_pred             eceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          293 EGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       293 ~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      .+.....     .+.++.+++++++|.+++. ...|+++++++|++.+.+++..||+|+.
T Consensus       286 ~~~~~~~-----~~~~~~~~~~l~~g~l~~~-~~~~~~~~~~~a~~~~~~~~~~gkvv~~  339 (340)
T cd05284         286 IGSLWGT-----RAELVEVVALAESGKVKVE-ITKFPLEDANEALDRLREGRVTGRAVLV  339 (340)
T ss_pred             EEEeccc-----HHHHHHHHHHHHhCCCCcc-eEEEeHHHHHHHHHHHHcCCccceEEec
Confidence            7765543     5678889999999999864 4578999999999999999989999975

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.8e-37  Score=289.03  Aligned_cols=305  Identities=22%  Similarity=0.192  Sum_probs=243.9

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCC-CCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSF-TPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~-v~G~e~~~~G~V~~   88 (356)
                      |++++++..  +.-    ..+  .+.+.| .+++++|+|||.++|||.+|++.+++......++. ++|||+  +|+|++
T Consensus         1 m~a~~~~~~--~~~----~~~--~~~~~p-~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~--~G~V~e   69 (350)
T COG1063           1 MKAAVVYVG--GGD----VRL--EEPPPP-IPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEF--VGEVVE   69 (350)
T ss_pred             CceeEEEec--CCc----ccc--ccCCCC-CCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccc--eEEEEE
Confidence            567777664  222    123  444444 57899999999999999999999985544445555 999997  889999


Q ss_pred             ecCCCCCCCCCCEEEEc-----------------------------------cccceeEeecCCCcceeecCCCCCccch
Q 018404           89 VDSGHPEFKKGDLVWGT-----------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYY  133 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~-----------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~  133 (356)
                      +| .++.+++||||...                                   |+|+||+++|.++.+.++ |+++  +.+
T Consensus        70 vG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~-pd~~--~~~  145 (350)
T COG1063          70 VG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKL-PDGI--DEE  145 (350)
T ss_pred             ec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecC-CCCC--Chh
Confidence            99 77889999999642                                   588999999987635555 7774  547


Q ss_pred             hcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhh-c
Q 018404          134 TGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNK-F  211 (356)
Q Consensus       134 ~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~-~  211 (356)
                      ++++..++.+++++........++++|+|+| +|++|++++++++.+|+ +|++++.+++|+          +.++ + .
T Consensus       146 ~aal~epla~~~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl----------~~A~-~~~  213 (350)
T COG1063         146 AAALTEPLATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERL----------ELAK-EAG  213 (350)
T ss_pred             hhhhcChhhhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHH----------HHHH-HhC
Confidence            9999999999988754555566667999999 99999999999999998 888889999999          9998 6 6


Q ss_pred             CCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhc
Q 018404          212 GFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR  289 (356)
Q Consensus       212 g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  289 (356)
                      +++.+++...+ +....+.+.+++ ++|++|||+|. ..+..++++++++|+++.+|.......     ..+...++.|+
T Consensus       214 g~~~~~~~~~~-~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~-----~~~~~~~~~ke  287 (350)
T COG1063         214 GADVVVNPSED-DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDI-----PLPAGLVVSKE  287 (350)
T ss_pred             CCeEeecCccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccC-----ccCHHHHHhcc
Confidence            66766665554 667788888888 99999999998 678999999999999999998654310     35577889999


Q ss_pred             ceeeceee-ecchhhHHHHHHHHHHHHHcCCCccc--eeeeeCCCcHHHHHHHHHcCCC-cceEEEE
Q 018404          290 IRMEGFVV-FDYFPQYSRFLDAVLPYIREGKVVYV--EDVADGLENAPAALVGLFSGRN-VGKQLVV  352 (356)
Q Consensus       290 ~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~l~~~--i~~~~~l~~~~~a~~~~~~~~~-~gk~vv~  352 (356)
                      +++.|... ..     ...++.+++++++|++.+.  +++.++++++++||+.+.+.+. .-|+++.
T Consensus       288 l~l~gs~~~~~-----~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~  349 (350)
T COG1063         288 LTLRGSLRPSG-----REDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLK  349 (350)
T ss_pred             cEEEeccCCCC-----cccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99999843 22     4678999999999999854  6778899999999999987554 4588775

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.6e-37  Score=286.29  Aligned_cols=307  Identities=21%  Similarity=0.239  Sum_probs=254.6

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++.++  | +  .++.+  .+++.| .+.+++++||+.++++|+.|+...... ......|.++|||+  +|+|++
T Consensus         1 m~a~~~~~~--~-~--~~~~~--~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~--~G~V~~   70 (341)
T cd08297           1 MKAAVVEEF--G-E--KPYEV--KDVPVP-EPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEG--AGVVVA   70 (341)
T ss_pred             CceEEeecc--C-C--CCceE--EEeeCC-CCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCccc--ceEEEE
Confidence            689999886  5 2  24555  455666 788999999999999999998876522 22233467899884  899999


Q ss_pred             ecCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCCCCccchhccc
Q 018404           89 VDSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGIL  137 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l  137 (356)
                      +|++++.+++||+|++                               .|+|++|+.++.+. ++++ |++++.. +++++
T Consensus        71 vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~-~~~l-p~~~~~~-~~a~l  147 (341)
T cd08297          71 VGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARY-VTPI-PDGLSFE-QAAPL  147 (341)
T ss_pred             eCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEecccc-EEEC-CCCCCHH-HHHHH
Confidence            9999999999999985                               37899999999998 9999 9985555 57788


Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE
Q 018404          138 GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF  217 (356)
Q Consensus       138 ~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv  217 (356)
                      +..+.|||+++.. .+++++++|+|+|+++++|++++++|+.+|++|+++++++++.          +.++ ++|++.++
T Consensus       148 ~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~v~  215 (341)
T cd08297         148 LCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKL----------ELAK-ELGADAFV  215 (341)
T ss_pred             HcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH----------HHHH-HcCCcEEE
Confidence            9999999999866 5899999999999988999999999999999999999999888          8887 89999999


Q ss_pred             ecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeece
Q 018404          218 NYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGF  295 (356)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (356)
                      ++.+. ++.+.+.+.+++ ++|++|||.++ ..+..++++++++|+++.+|.....     ....+...+..+++++.++
T Consensus       216 ~~~~~-~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~  289 (341)
T cd08297         216 DFKKS-DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGG-----FIPLDPFDLVLRGITIVGS  289 (341)
T ss_pred             cCCCc-cHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCC-----CCCCCHHHHHhcccEEEEe
Confidence            88876 788888888765 89999997775 7889999999999999999864421     1123445566788888775


Q ss_pred             eeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          296 VVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       296 ~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ....     .+.+++++++++++++++.+ ..|+++++++|++.+.++...||+|+++
T Consensus       290 ~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         290 LVGT-----RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             ccCC-----HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            4443     57789999999999998755 5789999999999999999999999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=4.9e-37  Score=292.42  Aligned_cols=317  Identities=20%  Similarity=0.233  Sum_probs=255.5

Q ss_pred             ccccccEEEEee--cccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC----------CCCCCC
Q 018404            6 EVLSNKQVILKN--YVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ----------DPDFSS   73 (356)
Q Consensus         6 ~~~~~~a~~~~~--~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~----------~~~~~p   73 (356)
                      +|.+|||+++..  +  |+|. ..+.+  .++|.| .+++++|+||+.++++|..|........          .....|
T Consensus         4 ~~~~~~a~~~~~~~~--~~~~-~~~~~--~~~~~p-~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~   77 (398)
T TIGR01751         4 VPETMYAFAIREERD--GDPR-QAIQL--EVVPVP-ELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLP   77 (398)
T ss_pred             cchhhhheEEecccC--CCcc-cceEE--eecCCC-CCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCC
Confidence            567899999954  6  6663 33444  567777 7899999999999999998876543111          000123


Q ss_pred             -CCCCCcceecEEEEEecCCCCCCCCCCEEEEc-------------------------------cccceeEeecCCCcce
Q 018404           74 -FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT-------------------------------TGWEEYSLIKNPQGLF  121 (356)
Q Consensus        74 -~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~l~  121 (356)
                       .++|||+  +|+|+++|++++++++||+|++.                               |+|+||++++.+. ++
T Consensus        78 ~~v~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~-~~  154 (398)
T TIGR01751        78 FHIIGSDA--SGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQ-LM  154 (398)
T ss_pred             ceecccce--EEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHH-eE
Confidence             3899985  89999999999999999999863                               7899999999988 99


Q ss_pred             eecCCCCCccchhcccCcchHHHHHHHHH--HcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccc
Q 018404          122 KIHHTDVPLSYYTGILGMPGMTAWAGFYE--ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPM  199 (356)
Q Consensus       122 ~~~p~~~~~~~~~a~l~~~~~tA~~~l~~--~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~  199 (356)
                      ++ |+++++. +++.++..+.|||+++..  ..++.+|++|+|+|++|++|++++++|+.+|++++++++++++.     
T Consensus       155 ~v-P~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~-----  227 (398)
T TIGR01751       155 PK-PKHLTWE-EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKA-----  227 (398)
T ss_pred             EC-CCCCCHH-HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHH-----
Confidence            99 9996555 577788999999999865  46789999999999999999999999999999999998888888     


Q ss_pred             hhHHHHHHHhhcCCCEEEecCCc---------------------ccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhc
Q 018404          200 QSQLVELLKNKFGFDDAFNYKEE---------------------NDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMR  257 (356)
Q Consensus       200 ~~~~~~~~~~~~g~~~vv~~~~~---------------------~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~  257 (356)
                           +.++ ++|++.++|+++.                     ..+.+.+.+.+++ ++|++|||+|+..+..++++++
T Consensus       228 -----~~~~-~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~  301 (398)
T TIGR01751       228 -----EYCR-ELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCR  301 (398)
T ss_pred             -----HHHH-HcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhc
Confidence                 8888 8999999987542                     0244566777776 8999999999988999999999


Q ss_pred             cCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHH
Q 018404          258 LHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAAL  337 (356)
Q Consensus       258 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~  337 (356)
                      ++|+++.+|.....+     ...+...++.++.++.+.....     .+.++++++++.++++.+.++++++++++++++
T Consensus       302 ~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~  371 (398)
T TIGR01751       302 RGGMVVICGGTTGYN-----HDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAH  371 (398)
T ss_pred             cCCEEEEEccccCCC-----CCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHH
Confidence            999999999754421     1223444556666666665443     345788999999999998888899999999999


Q ss_pred             HHHHcCCCcceEEEEec
Q 018404          338 VGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       338 ~~~~~~~~~gk~vv~~~  354 (356)
                      +.+.+++..||+|+.+.
T Consensus       372 ~~~~~~~~~gkvvv~~~  388 (398)
T TIGR01751       372 QDVHRNHHQGNVAVLVL  388 (398)
T ss_pred             HHHHcCCCCceEEEEeC
Confidence            99999999999999875

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=7.1e-37  Score=284.08  Aligned_cols=320  Identities=30%  Similarity=0.453  Sum_probs=257.8

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~   87 (356)
                      +|||+.+.++  +...++.+++  .+.+.| .+.+++++||+.++++|+.|+....+. .....+|.++|||+  +|+|.
T Consensus         1 ~~~~~~~~~~--~~~~~~~~~~--~~~~~~-~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~--~G~v~   73 (329)
T cd08250           1 SFRKLVVHRL--SPNFREATSI--VDVPVP-LPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEG--VGEVV   73 (329)
T ss_pred             CceEEEeccC--CCCcccCceE--EecCCC-CCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCcee--EEEEE
Confidence            4899999998  5511234555  455666 788999999999999999999876532 22245788999985  89999


Q ss_pred             EecCCCCCCCCCCEEEEc--cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecC
Q 018404           88 VVDSGHPEFKKGDLVWGT--TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAA  165 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga  165 (356)
                      .+|+++.++++||+|+++  |+|++|+.++.+. ++++ |++  +. ++++++..+.|||+++.....+++|++|+|+|+
T Consensus        74 ~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~-~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga  148 (329)
T cd08250          74 AVGEGVTDFKVGDAVATMSFGAFAEYQVVPARH-AVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGETVLVTAA  148 (329)
T ss_pred             EECCCCCCCCCCCEEEEecCcceeEEEEechHH-eEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeC
Confidence            999999999999999986  8999999999998 9999 886  44 577899999999999988788999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCC
Q 018404          166 SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG  245 (356)
Q Consensus       166 ~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g  245 (356)
                      +|++|++++++++.+|++|+++++++++.          +.++ ++|++.+++..+. ++.+.+.+..++++|++|||+|
T Consensus       149 ~g~ig~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g  216 (329)
T cd08250         149 AGGTGQFAVQLAKLAGCHVIGTCSSDEKA----------EFLK-SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVG  216 (329)
T ss_pred             ccHHHHHHHHHHHHcCCeEEEEeCcHHHH----------HHHH-HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCc
Confidence            99999999999999999999999998887          8887 8999888887665 6666776655458999999999


Q ss_pred             chHHHHHHHhhccCCeEEEEccccccCCCC-C---ccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc
Q 018404          246 GKMLDAVLLNMRLHGRIAACGMISQYNLSQ-P---EGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV  321 (356)
Q Consensus       246 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~  321 (356)
                      +..+..++++++++|+++.+|......... .   .........+.+++++.++....+.....+.+.++++++.++.+.
T Consensus       217 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  296 (329)
T cd08250         217 GEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLV  296 (329)
T ss_pred             HHHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCee
Confidence            999999999999999999998754321000 0   001112345678888888766543333466788899999999988


Q ss_pred             cc--eeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          322 YV--EDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       322 ~~--i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      +.  +...++++++++|++.+.+++..||+|++
T Consensus       297 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         297 CEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             eeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            74  34458999999999999988888898863

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-36  Score=284.15  Aligned_cols=308  Identities=20%  Similarity=0.250  Sum_probs=255.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  |.|    +.+  .++|.| .+.+++|+||+.++++|++|+....+......+|.++|+|+  +|+|+.+
T Consensus         1 m~a~~~~~~--~~~----~~~--~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~--~G~V~~~   69 (345)
T cd08260           1 MRAAVYEEF--GEP----LEI--REVPDP-EPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEF--AGVVVEV   69 (345)
T ss_pred             CeeEEEecC--CCC----cEE--EEccCC-CCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccce--eEEEEEE
Confidence            689999886  554    455  456666 78899999999999999999987763333345578999985  8999999


Q ss_pred             cCCCCCCCCCCEEEE------------------------------ccccceeEeecCC--CcceeecCCCCCccchhccc
Q 018404           90 DSGHPEFKKGDLVWG------------------------------TTGWEEYSLIKNP--QGLFKIHHTDVPLSYYTGIL  137 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~--~~l~~~~p~~~~~~~~~a~l  137 (356)
                      |++++.+++||+|++                              .|+|++|++++..  . ++++ |++++.. +++.+
T Consensus        70 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~i-P~~~~~~-~aa~l  146 (345)
T cd08260          70 GEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVN-LVRL-PDDVDFV-TAAGL  146 (345)
T ss_pred             CCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCc-eEEC-CCCCCHH-Hhhhh
Confidence            999999999999986                              3789999999985  6 9999 9996554 57788


Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE
Q 018404          138 GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF  217 (356)
Q Consensus       138 ~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv  217 (356)
                      +..++|||+++...+++.++++|+|+| +|++|++++++|+.+|++|++++++.++.          +.++ ++|++.++
T Consensus       147 ~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~----------~~~~-~~g~~~~i  214 (345)
T cd08260         147 GCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKL----------ELAR-ELGAVATV  214 (345)
T ss_pred             ccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHH----------HHHH-HhCCCEEE
Confidence            899999999998788899999999999 79999999999999999999999999988          8888 89999999


Q ss_pred             ecCC-cccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeece
Q 018404          218 NYKE-ENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGF  295 (356)
Q Consensus       218 ~~~~-~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (356)
                      ++++ . ++.+.+...+.+++|++|||+|+ ..+..++++|+++|+++.+|.......   ....+...++.+++++.++
T Consensus       215 ~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~  290 (345)
T cd08260         215 NASEVE-DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEA---GVALPMDRVVARELEIVGS  290 (345)
T ss_pred             ccccch-hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCC---ccccCHHHHhhcccEEEeC
Confidence            8876 4 77777777765589999999996 788899999999999999987543211   0122344455777887776


Q ss_pred             eeecchhhHHHHHHHHHHHHHcCCCccc--eeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          296 VVFDYFPQYSRFLDAVLPYIREGKVVYV--EDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       296 ~~~~~~~~~~~~l~~~~~~~~~g~l~~~--i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ....     .+.+++++++++++++.+.  +...++++++++|++.+.+++..||+|++
T Consensus       291 ~~~~-----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         291 HGMP-----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             CcCC-----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            5533     5678889999999998754  67789999999999999999999998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=1.1e-36  Score=285.45  Aligned_cols=305  Identities=17%  Similarity=0.194  Sum_probs=251.1

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCC------------CCCCCCCCC
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD------------PDFSSFTPG   77 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~------------~~~~p~v~G   77 (356)
                      |||+++..+  +.+    +++  .++|.| +++++||+||+.++++|++|++...+...            ....|.++|
T Consensus         1 ~~a~~~~~~--~~~----~~~--~~~~~p-~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g   71 (350)
T cd08240           1 MKAAAVVEP--GKP----LEE--VEIDTP-KPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLG   71 (350)
T ss_pred             CeeEEeccC--CCC----ceE--EecCCC-CCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccc
Confidence            688988776  544    445  466777 78999999999999999999987653211            223467899


Q ss_pred             CcceecEEEEEecCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCC
Q 018404           78 SPIEGFGVAKVVDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTD  127 (356)
Q Consensus        78 ~e~~~~G~V~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~  127 (356)
                      ||+  +|+|+++|++++++++||+|+++                              |+|++|+.++.+. ++++ |++
T Consensus        72 ~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~  147 (350)
T cd08240          72 HEI--VGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSR-YLVD-PGG  147 (350)
T ss_pred             cce--eEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHH-eeeC-CCC
Confidence            985  89999999999999999999864                              6899999999998 9999 998


Q ss_pred             CCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHH
Q 018404          128 VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVEL  206 (356)
Q Consensus       128 ~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~  206 (356)
                      ++.. +++++++.++|||+++.....+.++++|+|+| +|++|++++|+|+.+|+ +|+++++++++.          +.
T Consensus       148 ~s~~-~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~----------~~  215 (350)
T cd08240         148 LDPA-LAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKL----------EA  215 (350)
T ss_pred             CCHH-HeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHH----------HH
Confidence            6555 57788899999999998777777899999996 79999999999999999 789998888887          88


Q ss_pred             HHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH
Q 018404          207 LKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV  285 (356)
Q Consensus       207 ~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  285 (356)
                      ++ ++|++.++++++. .+.+.+.+..++++|++||++|+ ..+..++++|+++|+++.+|......      ..+....
T Consensus       216 ~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~------~~~~~~~  287 (350)
T cd08240         216 AK-AAGADVVVNGSDP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEA------TLPLPLL  287 (350)
T ss_pred             HH-HhCCcEEecCCCc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCC------cccHHHH
Confidence            87 8999888887765 66677777665589999999996 78899999999999999998754321      1122234


Q ss_pred             HhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          286 VYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ..+++++.++....     .+++.++++++++|.+++.+...|+++++++|++.+.+++..||+++.
T Consensus       288 ~~~~~~i~~~~~~~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         288 PLRALTIQGSYVGS-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             hhcCcEEEEcccCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            45778877766554     467888999999999987777789999999999999999888999875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-36  Score=287.27  Aligned_cols=307  Identities=22%  Similarity=0.254  Sum_probs=253.8

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +.+    +.++  +.|.| .+++++|+||+.++++|++|++...... ...+|.++|||+  +|+|+.+
T Consensus         1 ~~a~~~~~~--~~~----~~~~--~~~~~-~~~~~~v~v~v~~~~l~~~d~~~~~~~~-~~~~p~~~g~e~--~G~v~~v   68 (367)
T cd08263           1 MKAAVLKGP--NPP----LTIE--EIPVP-RPKEGEILIRVAACGVCHSDLHVLKGEL-PFPPPFVLGHEI--SGEVVEV   68 (367)
T ss_pred             CeeEEEecC--CCC----cEEE--EeeCC-CCCCCeEEEEEEEeeeCcchHHHhcCCC-CCCCCccccccc--ceEEEEe
Confidence            689999886  543    5664  45556 7889999999999999999998776322 235678999985  8999999


Q ss_pred             cCCCCC---CCCCCEEEE----------------------------------------------------ccccceeEee
Q 018404           90 DSGHPE---FKKGDLVWG----------------------------------------------------TTGWEEYSLI  114 (356)
Q Consensus        90 G~~v~~---~~~Gd~V~~----------------------------------------------------~g~~~~~~~v  114 (356)
                      |+++.+   +++||+|++                                                    .|+|++|+.+
T Consensus        69 G~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  148 (367)
T cd08263          69 GPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVV  148 (367)
T ss_pred             CCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEe
Confidence            999988   999999987                                                    2789999999


Q ss_pred             cCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcch
Q 018404          115 KNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREK  193 (356)
Q Consensus       115 ~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~  193 (356)
                      +.+. ++++ |++++.. ++++++..++|||+++.+.+.+.++++|+|+| +|++|++++++|+.+|++ |+++++++++
T Consensus       149 ~~~~-~~~~-P~~is~~-~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~  224 (367)
T cd08263         149 PATA-LAPL-PESLDYT-ESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEK  224 (367)
T ss_pred             chhh-EEEC-CCCCCHH-HHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHH
Confidence            9998 9999 9996655 68889999999999998888889999999996 899999999999999997 9989888888


Q ss_pred             hccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCch-HHHHHHHhhccCCeEEEEcccccc
Q 018404          194 VWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMISQY  271 (356)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~  271 (356)
                      .          +.++ ++|++.++++++. ++.+.+++.+++ ++|++|||+|+. ....++++|+++|+++.+|.....
T Consensus       225 ~----------~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~  292 (367)
T cd08263         225 L----------AKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG  292 (367)
T ss_pred             H----------HHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC
Confidence            7          8887 8999999998776 778888887765 899999999996 899999999999999999864321


Q ss_pred             CCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccc--eeeeeCCCcHHHHHHHHHcCCCcceE
Q 018404          272 NLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYV--EDVADGLENAPAALVGLFSGRNVGKQ  349 (356)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~--i~~~~~l~~~~~a~~~~~~~~~~gk~  349 (356)
                          .....+...++.+++++.++....    ..+.+++++++++++.+++.  +++.++++++.+|++.+.+++..||+
T Consensus       293 ----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~  364 (367)
T cd08263         293 ----ATAEIPITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRA  364 (367)
T ss_pred             ----CccccCHHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCcccee
Confidence                111234445556788777643222    14678899999999999864  67789999999999999999888999


Q ss_pred             EEE
Q 018404          350 LVV  352 (356)
Q Consensus       350 vv~  352 (356)
                      ||+
T Consensus       365 ~~~  367 (367)
T cd08263         365 IVE  367 (367)
T ss_pred             eeC
Confidence            874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1.2e-36  Score=281.58  Aligned_cols=311  Identities=22%  Similarity=0.305  Sum_probs=256.7

Q ss_pred             EeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEEecCCC
Q 018404           15 LKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKVVDSGH   93 (356)
Q Consensus        15 ~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~vG~~v   93 (356)
                      ++++  |.|.+.++.+  .+.+.| ++++++|+||+.++++|+.|+..+... ......|.++|||+  +|+|+.+|+++
T Consensus         3 ~~~~--~~~~~~~~~~--~~~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~--~G~v~~~G~~v   75 (323)
T cd05282           3 YTQF--GEPLPLVLEL--VSLPIP-PPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEG--VGVVVEVGSGV   75 (323)
T ss_pred             eCcC--CCCccceEEe--EeCCCC-CCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcce--EEEEEEeCCCC
Confidence            3444  5553334444  455666 789999999999999999998876522 22234578999985  89999999999


Q ss_pred             CCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHH
Q 018404           94 PEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVG  170 (356)
Q Consensus        94 ~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG  170 (356)
                      +++++||+|+++   |+|++|+.++... ++++ |++++.. +++.++..+.+||+++...+.+.+|++|+|+|++|++|
T Consensus        76 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg  152 (323)
T cd05282          76 SGLLVGQRVLPLGGEGTWQEYVVAPADD-LIPV-PDSISDE-QAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVG  152 (323)
T ss_pred             CCCCCCCEEEEeCCCCcceeEEecCHHH-eEEC-CCCCCHH-HHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHH
Confidence            999999999986   7999999999988 9999 9985554 57778899999999998888899999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHH
Q 018404          171 QLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKML  249 (356)
Q Consensus       171 ~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~  249 (356)
                      ++++++|+.+|++++++++++++.          +.++ ++|+++++++.+. ++...+.+.+.+ ++|++|||+|+...
T Consensus       153 ~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~  220 (323)
T cd05282         153 RMLIQLAKLLGFKTINVVRRDEQV----------EELK-ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGGESA  220 (323)
T ss_pred             HHHHHHHHHCCCeEEEEecChHHH----------HHHH-hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCCCHHH
Confidence            999999999999999999999888          8888 8999999988775 677888888877 99999999999888


Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-----hhhHHHHHHHHHHHHHcCCCccce
Q 018404          250 DAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-----FPQYSRFLDAVLPYIREGKVVYVE  324 (356)
Q Consensus       250 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~g~l~~~i  324 (356)
                      ..++++++++|+++.+|.....+     ...+...+..+++++.++....+     +....+.++++++++.++.+.+.+
T Consensus       221 ~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~  295 (323)
T cd05282         221 TRLARSLRPGGTLVNYGLLSGEP-----VPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPV  295 (323)
T ss_pred             HHHHHhhCCCCEEEEEccCCCCC-----CCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCc
Confidence            89999999999999998754321     12233344448888888776553     234567788899999999998877


Q ss_pred             eeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          325 DVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      .+.|+++++++|++.+.+++..||+|++
T Consensus       296 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         296 GAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             cceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            8889999999999999988888898863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.1e-36  Score=285.43  Aligned_cols=307  Identities=18%  Similarity=0.183  Sum_probs=243.5

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +.     +.+  .+.|.| .+.++||+|||.++++|++|++..........+|.++|||+  +|+|+++
T Consensus         1 mka~~~~~~--~~-----~~l--~~~~~p-~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~--~G~V~~v   68 (351)
T cd08285           1 MKAFAMLGI--GK-----VGW--IEKPIP-VCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEA--VGVVEEV   68 (351)
T ss_pred             CceEEEccC--Cc-----cEE--EECCCC-CCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcce--EEEEEEe
Confidence            689999876  43     345  455556 78899999999999999999987663322345578999995  8999999


Q ss_pred             cCCCCCCCCCCEEEE---------------------------------ccccceeEeecCC--CcceeecCCCCCccchh
Q 018404           90 DSGHPEFKKGDLVWG---------------------------------TTGWEEYSLIKNP--QGLFKIHHTDVPLSYYT  134 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~l~~~~p~~~~~~~~~  134 (356)
                      |++++++++||+|++                                 .|+|+||+.++..  . ++++ |++++.. ++
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~-~~~l-P~~~~~~-~a  145 (351)
T cd08285          69 GSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADAN-LAPL-PDGLTDE-QA  145 (351)
T ss_pred             cCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCc-eEEC-CCCCCHH-Hh
Confidence            999999999999986                                 2788999999974  6 9999 9985554 57


Q ss_pred             cccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCC
Q 018404          135 GILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGF  213 (356)
Q Consensus       135 a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~  213 (356)
                      +.++..+.|||+++ ....+++|++|||+| +|++|++++|+|+.+|+ .|+++++++++.          +.++ ++|+
T Consensus       146 a~~~~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~----------~~~~-~~g~  212 (351)
T cd08285         146 VMLPDMMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRV----------ELAK-EYGA  212 (351)
T ss_pred             hhhccchhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHH----------HHHH-HcCC
Confidence            77888999999997 567899999999997 79999999999999999 588888888887          8888 8999


Q ss_pred             CEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccc--hHHHHhhc
Q 018404          214 DDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHN--LMNVVYKR  289 (356)
Q Consensus       214 ~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~  289 (356)
                      ++++++.+. ++.+.+.+.+.+ ++|++|||+|+ ..+..++++|+++|+++.+|......    ....+  ......+.
T Consensus       213 ~~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~  287 (351)
T cd08285         213 TDIVDYKNG-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDD----YLPIPREEWGVGMGH  287 (351)
T ss_pred             ceEecCCCC-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCc----eeecChhhhhhhccc
Confidence            999998776 788888887766 89999999998 68899999999999999998754310    01111  11122334


Q ss_pred             ceeeceeeecchhhHHHHHHHHHHHHHcCCCcc---ceeeeeCCCcHHHHHHHHHcCCC-cceEEEEe
Q 018404          290 IRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY---VEDVADGLENAPAALVGLFSGRN-VGKQLVVV  353 (356)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~---~i~~~~~l~~~~~a~~~~~~~~~-~gk~vv~~  353 (356)
                      .++.+.....    ..++++++++++.+|++++   .+...++++++++|++.+.+++. ..|+++.+
T Consensus       288 ~~i~~~~~~~----~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         288 KTINGGLCPG----GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             cEEEEeecCC----ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            4444332211    1467888999999999997   34456899999999999988764 67998864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.9e-36  Score=276.91  Aligned_cols=300  Identities=20%  Similarity=0.225  Sum_probs=245.2

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      ||++++.++  + |.    .++..++|.| .++++||+||+.++++|+.|+....    ....+.++|||+  +|+|+++
T Consensus         1 ~~~~~~~~~--~-~~----~~~~~~~~~p-~~~~~ev~v~v~~~~i~~~d~~~~~----~~~~~~~~g~e~--~G~v~~~   66 (305)
T cd08270           1 MRALVVDPD--A-PL----RLRLGEVPDP-QPAPHEALVRVAAISLNRGELKFAA----ERPDGAVPGWDA--AGVVERA   66 (305)
T ss_pred             CeEEEEccC--C-Cc----eeEEEecCCC-CCCCCEEEEEEEEEecCHHHHHhhc----cCCCCCccccee--EEEEEEe
Confidence            588999775  4 53    4544566667 7899999999999999999997654    223467899884  8999999


Q ss_pred             cCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCC
Q 018404           90 DSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAAS  166 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~  166 (356)
                      |+++..|++||+|+++   |+|++|+.++.+. ++++ |+++++. +++++++.+.|||+++...... +|++|+|+|++
T Consensus        67 G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~  142 (305)
T cd08270          67 AADGSGPAVGARVVGLGAMGAWAELVAVPTGW-LAVL-PDGVSFA-QAATLPVAGVTALRALRRGGPL-LGRRVLVTGAS  142 (305)
T ss_pred             CCCCCCCCCCCEEEEecCCcceeeEEEEchHH-eEEC-CCCCCHH-HHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCC
Confidence            9999999999999986   7999999999998 9999 9996665 6888999999999999776655 59999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc
Q 018404          167 GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       167 g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~  246 (356)
                      |++|++++++++.+|++|+.+++++++.          +.++ ++|++.+++...  +       ..++++|++|||+|+
T Consensus       143 ~~~g~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g~  202 (305)
T cd08270         143 GGVGRFAVQLAALAGAHVVAVVGSPARA----------EGLR-ELGAAEVVVGGS--E-------LSGAPVDLVVDSVGG  202 (305)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HcCCcEEEeccc--c-------ccCCCceEEEECCCc
Confidence            9999999999999999999999998888          8898 799876554322  1       122479999999999


Q ss_pred             hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHh--hcceeeceeeecchhhHHHHHHHHHHHHHcCCCccce
Q 018404          247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVY--KRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVE  324 (356)
Q Consensus       247 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i  324 (356)
                      ..+..++++|+++|+++.+|.....     ....+...+..  ++.++.++.... +....+.++.++++++++++++.+
T Consensus       203 ~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~  276 (305)
T cd08270         203 PQLARALELLAPGGTVVSVGSSSGE-----PAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRI  276 (305)
T ss_pred             HHHHHHHHHhcCCCEEEEEeccCCC-----cccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCcccee
Confidence            8899999999999999999874321     11123333333  577877776653 333457889999999999999877


Q ss_pred             eeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          325 DVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ...++++++++|++.+.+++..||+|+.+
T Consensus       277 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         277 GWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             ccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            78899999999999999999999999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=2.9e-36  Score=279.55  Aligned_cols=312  Identities=20%  Similarity=0.281  Sum_probs=240.5

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++.++  |++.  .+.+  .++|.| .++++||+||+.++++|++|..... .+.....+|.++|||+  +|+|++
T Consensus         1 ~~a~~~~~~--~~~~--~~~~--~~~~~p-~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~--~G~V~~   71 (326)
T cd08289           1 FQALVVEKD--EDDV--SVSV--KNLTLD-DLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDL--AGTVVE   71 (326)
T ss_pred             CeeEEEecc--CCcc--eeEE--EEccCC-CCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccce--eEEEEE
Confidence            689999887  6652  3444  567777 7899999999999999999986543 1212234578999995  889988


Q ss_pred             ecCCCCCCCCCCEEEEc---------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcC---CCC
Q 018404           89 VDSGHPEFKKGDLVWGT---------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICA---PKK  156 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~---~~~  156 (356)
                      .|  +.++++||+|++.         |+|++|+.++++. ++++ |++++.. +++.+++.+.|||.++....+   ..+
T Consensus        72 ~~--~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~  146 (326)
T cd08289          72 SN--DPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEW-VVPL-PKGLTLK-EAMILGTAGFTAALSIHRLEENGLTPE  146 (326)
T ss_pred             cC--CCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHH-eEEC-CCCCCHH-HHhhhhhHHHHHHHHHHHHHhcCCCCC
Confidence            54  5779999999974         8999999999998 9999 9996555 577888999999998854332   345


Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      +++|+|+|++|++|++++|+|+.+|++|+++++++++.          +.++ ++|++.++++++.  ..+.+++.++++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~v~~~~~~--~~~~~~~~~~~~  213 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAA----------DYLK-KLGAKEVIPREEL--QEESIKPLEKQR  213 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHH----------HHHH-HcCCCEEEcchhH--HHHHHHhhccCC
Confidence            78999999999999999999999999999999999998          8888 8999888887652  345566665448


Q ss_pred             ccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHHHH
Q 018404          237 IDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLPYI  315 (356)
Q Consensus       237 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~  315 (356)
                      +|++|||+|+..+..++++++++|+++.+|.....+     .+.....++.+++++.++..... .....+.+..+...+
T Consensus       214 ~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (326)
T cd08289         214 WAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGGE-----VETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDL  288 (326)
T ss_pred             cCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCCCC-----CCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhc
Confidence            999999999988999999999999999999753221     11234455678888888754322 112233444444444


Q ss_pred             HcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          316 REGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       316 ~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ..+.+...+.+.++++++.+|++.+.+++..||+|+++
T Consensus       289 ~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         289 KPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             CccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            43334445688899999999999999999999999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=4.2e-36  Score=278.23  Aligned_cols=310  Identities=19%  Similarity=0.275  Sum_probs=243.5

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||++++++  +++.  .+++  .++|.| .+++++|+||+.++++|++|+....+. .....+|.++|||+  +|+|++
T Consensus         1 ~~a~~~~~~--~~~~--~~~~--~~~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~--~G~v~~   71 (325)
T cd05280           1 FKALVVEEQ--DGGV--SLFL--RTLPLD-DLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDA--AGTVVS   71 (325)
T ss_pred             CceEEEccc--CCCC--cceE--EeCCCC-CCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCccc--EEEEEE
Confidence            689999987  6642  3455  456666 789999999999999999999877632 22233578999985  889999


Q ss_pred             ecCCCCCCCCCCEEEEc---------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCC--C-C
Q 018404           89 VDSGHPEFKKGDLVWGT---------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAP--K-K  156 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~--~-~  156 (356)
                      +  +++.+++||+|++.         |+|++|++++.+. ++++ |++++.. +++.+++.+.+||.++....+.  . .
T Consensus        72 ~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~  146 (325)
T cd05280          72 S--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADW-VVPL-PEGLSLR-EAMILGTAGFTAALSVHRLEDNGQTPE  146 (325)
T ss_pred             e--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhh-EEEC-CCCCCHH-HHHhhHHHHHHHHHHHHHHhhccCCCC
Confidence            8  56789999999974         7899999999998 9999 9986555 5888999999999998665433  5 3


Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC-C
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP-E  235 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~-~  235 (356)
                      +++|+|+|++|++|++++|+|+.+|++|+++++++++.          +.++ ++|+++++++.+.   ...+.+... +
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~---~~~~~~~~~~~  212 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQA----------DYLK-SLGASEVLDREDL---LDESKKPLLKA  212 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-hcCCcEEEcchhH---HHHHHHHhcCC
Confidence            57999999999999999999999999999999999988          8888 8999888876542   222333333 3


Q ss_pred             CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecch-hhHHHHHHHHHHH
Q 018404          236 GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYF-PQYSRFLDAVLPY  314 (356)
Q Consensus       236 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~  314 (356)
                      ++|++|||+|+..+..++++++++|+++.+|.....+     .......++.+++++.+....... ....+.++.+.++
T Consensus       213 ~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
T cd05280         213 RWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGPE-----LTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATE  287 (325)
T ss_pred             CccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCCc-----cccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHH
Confidence            8999999999999999999999999999999754321     122333445688888887655432 2334566677777


Q ss_pred             HHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          315 IREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       315 ~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +..+ +.+.+...|+++++++|++.+.+++..||+|+++
T Consensus       288 ~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         288 WKPD-LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HhcC-CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            7777 4445778899999999999999999999999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=5.3e-36  Score=276.62  Aligned_cols=310  Identities=19%  Similarity=0.232  Sum_probs=248.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      ||++++.+.  +.+.  .+.+  .+.+.| .+++++|+||+.++++|+.|+............|.++|||+  +|+|+++
T Consensus         1 ~~~~~~~~~--~~~~--~~~~--~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~--~G~v~~v   71 (320)
T cd08243           1 MKAIVIEQP--GGPE--VLKL--REIPIP-EPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEA--VGEVEEA   71 (320)
T ss_pred             CeEEEEcCC--CCcc--ceEE--eecCCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccee--EEEEEEe
Confidence            578888775  5442  3344  455666 78999999999999999999987764333345578999985  8999999


Q ss_pred             cCCCCCCCCCCEEEEc---------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEE
Q 018404           90 DSGHPEFKKGDLVWGT---------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYI  160 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~V  160 (356)
                      |+  ..+++||+|+++         |+|++|+.++... ++++ |+++++. +++++++++.|||+++.....+++|++|
T Consensus        72 G~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~v  146 (320)
T cd08243          72 PG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQ-VYAI-DSDLSWA-ELAALPETYYTAWGSLFRSLGLQPGDTL  146 (320)
T ss_pred             cC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHH-cEeC-CCCCCHH-HHHhcchHHHHHHHHHHHhcCCCCCCEE
Confidence            95  579999999986         7899999999988 9999 9985554 5888999999999999888889999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEE
Q 018404          161 YVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIY  240 (356)
Q Consensus       161 lI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~v  240 (356)
                      +|+|++|++|++++|+|+.+|++|+++++++++.          +.++ ++|++++++. .. ++.+.+++. ++++|++
T Consensus       147 lV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~v  212 (320)
T cd08243         147 LIRGGTSSVGLAALKLAKALGATVTATTRSPERA----------ALLK-ELGADEVVID-DG-AIAEQLRAA-PGGFDKV  212 (320)
T ss_pred             EEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-hcCCcEEEec-Cc-cHHHHHHHh-CCCceEE
Confidence            9999999999999999999999999999998888          8887 8999888754 43 677777777 4589999


Q ss_pred             EeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCC
Q 018404          241 FEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKV  320 (356)
Q Consensus       241 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l  320 (356)
                      |||+|+..+..++++++++|+++.+|...+...... ........+.+++++.++.....   ....++.++++++++.+
T Consensus       213 l~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  288 (320)
T cd08243         213 LELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTLED-FNPMDDIPSGVNLTLTGSSSGDV---PQTPLQELFDFVAAGHL  288 (320)
T ss_pred             EECCChHHHHHHHHHhccCCEEEEEccCCCCcccCC-cchhhhhhhccceEEEecchhhh---hHHHHHHHHHHHHCCce
Confidence            999999889999999999999999997533211000 00111112355666665544321   24568889999999999


Q ss_pred             ccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          321 VYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       321 ~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      ++.+...++++++++|++.+.++...||+|+
T Consensus       289 ~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         289 DIPPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             ecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            8777788999999999999998888889886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=3.1e-36  Score=281.03  Aligned_cols=305  Identities=20%  Similarity=0.241  Sum_probs=246.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||++++.+  | |.  ++.+  .+++.| .++++||+||+.++++|++|+....... ...+|.++|||+  +|+|+.+
T Consensus         1 m~a~~~~~~--~-~~--~~~~--~~~~~p-~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~--~G~v~~v   69 (339)
T cd08249           1 QKAAVLTGP--G-GG--LLVV--VDVPVP-KPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDF--AGTVVEV   69 (339)
T ss_pred             CceEEeccC--C-CC--cccc--cCCCCC-CCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeee--eEEEEEe
Confidence            689999886  5 43  3444  567777 8899999999999999999988764222 123567899885  8999999


Q ss_pred             cCCCCCCCCCCEEEEc-----------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCC----
Q 018404           90 DSGHPEFKKGDLVWGT-----------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAP----  154 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~----  154 (356)
                      |++++.+++||+|+++           |+|++|++++.+. ++++ |++++.. +++.+++.+.|||+++.+..++    
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~  146 (339)
T cd08249          70 GSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADL-TAKI-PDNISFE-EAATLPVGLVTAALALFQKLGLPLPP  146 (339)
T ss_pred             CCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhh-eEEC-CCCCCHH-HceecchHHHHHHHHHhccccCCCCC
Confidence            9999999999999986           7999999999988 9999 9985555 5778899999999998766554    


Q ss_pred             ------CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHH
Q 018404          155 ------KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA  228 (356)
Q Consensus       155 ------~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  228 (356)
                            .++++|+|+|++|++|++++++|+.+|++|++++ +.++.          +.++ ++|+++++++.+. ++.+.
T Consensus       147 ~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~----------~~~~-~~g~~~v~~~~~~-~~~~~  213 (339)
T cd08249         147 PKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNF----------DLVK-SLGADAVFDYHDP-DVVED  213 (339)
T ss_pred             CCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccH----------HHHH-hcCCCEEEECCCc-hHHHH
Confidence                  7899999999999999999999999999999988 55777          8887 8999999998776 78888


Q ss_pred             HHHhCCCCccEEEeCCCc-hHHHHHHHhhcc--CCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeec------
Q 018404          229 LKRCFPEGIDIYFEHVGG-KMLDAVLLNMRL--HGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFD------  299 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  299 (356)
                      +++.+++++|++||++|+ ..+..+++++++  +|+++.+|......            ....+..+.......      
T Consensus       214 l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~  281 (339)
T cd08249         214 IRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVLGYTVFGEIP  281 (339)
T ss_pred             HHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEEeeeeccccc
Confidence            888776689999999998 899999999999  99999998743321            011122222222211      


Q ss_pred             -chhhHHHHHHHHHHHHHcCCCccceeeeeC--CCcHHHHHHHHHcCC-CcceEEEEe
Q 018404          300 -YFPQYSRFLDAVLPYIREGKVVYVEDVADG--LENAPAALVGLFSGR-NVGKQLVVV  353 (356)
Q Consensus       300 -~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~--l~~~~~a~~~~~~~~-~~gk~vv~~  353 (356)
                       .+......++.++++++++.+.+.+...++  ++++++|++.+.+++ ..+|+|+++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         282 EDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             ccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence             122334678889999999999977666677  999999999999988 889999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=6e-36  Score=278.48  Aligned_cols=303  Identities=23%  Similarity=0.272  Sum_probs=246.8

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +++    +++  .++|.| .+++++++||+.++++|++|+....+......+|.++|||+  +|+|+++
T Consensus         1 m~a~~~~~~--~~~----~~~--~~~~~~-~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~--~G~v~~~   69 (334)
T PRK13771          1 MKAVILPGF--KQG----YRI--EEVPDP-KPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEV--VGTVEEV   69 (334)
T ss_pred             CeeEEEcCC--CCC----cEE--EeCCCC-CCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccc--eEEEEEe
Confidence            689999887  553    345  566777 78999999999999999999987664333344578899985  8999999


Q ss_pred             cCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhcccCc
Q 018404           90 DSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGM  139 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~  139 (356)
                      |++++.+++||+|+++                              |+|++|+.++.+. ++++ |++++.. +++.+++
T Consensus        70 g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~~a~l~~  146 (334)
T PRK13771         70 GENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTS-LVKV-PPNVSDE-GAVIVPC  146 (334)
T ss_pred             CCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhc-eEEC-CCCCCHH-Hhhcccc
Confidence            9999889999999974                              6899999999998 9999 9986555 5778899


Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      .+.+||+++... .+.++++|+|+|++|++|++++++++.+|++|+++++++++.          +.++ ++ +++++++
T Consensus       147 ~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~----------~~~~-~~-~~~~~~~  213 (334)
T PRK13771        147 VTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKA----------KIVS-KY-ADYVIVG  213 (334)
T ss_pred             hHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HH-HHHhcCc
Confidence            999999999775 899999999999999999999999999999999999998887          7777 77 6566654


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeec
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFD  299 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (356)
                      .   ++.+.+++.  +++|++|||+|+.....++++|+++|+++.+|......    .........+.+++++.+.....
T Consensus       214 ~---~~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  284 (334)
T PRK13771        214 S---KFSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSP----TYSLRLGYIILKDIEIIGHISAT  284 (334)
T ss_pred             h---hHHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCC----CcccCHHHHHhcccEEEEecCCC
Confidence            3   345555554  36999999999988899999999999999999743211    10112233456777777764322


Q ss_pred             chhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          300 YFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       300 ~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                           .++++.+++++++|.+++.+.+.++++++++|++.+.++...||+|+..
T Consensus       285 -----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        285 -----KRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             -----HHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence                 5678999999999999887888999999999999999888889999865

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=1.7e-35  Score=274.07  Aligned_cols=309  Identities=20%  Similarity=0.280  Sum_probs=244.4

Q ss_pred             cEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEEe
Q 018404           11 KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        11 ~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      ||+++.+.  |.|.    .++..++|.| .+++++|+||+.++++|++|+....+. .....+|.++|||+  +|+|+. 
T Consensus         1 ~a~~~~~~--~~~~----~~~~~~~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~--~G~V~~-   70 (323)
T TIGR02823         1 KALVVEKE--DGKV----SAQVETLDLS-DLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDA--AGTVVS-   70 (323)
T ss_pred             CeEEEccC--CCCc----ceeEeecCCC-CCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeee--EEEEEe-
Confidence            68888886  6663    4555677777 789999999999999999998876532 22234578899985  889988 


Q ss_pred             cCCCCCCCCCCEEEEc---------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHc--CCCCCC
Q 018404           90 DSGHPEFKKGDLVWGT---------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEIC--APKKGE  158 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~--~~~~g~  158 (356)
                       +++.+|++||+|+++         |+|++|+.++.+. ++++ |++++.. +++.++..+.+|+.++....  .+.+|+
T Consensus        71 -~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~~~~~  146 (323)
T TIGR02823        71 -SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADW-LVPL-PEGLSLR-EAMALGTAGFTAALSVMALERNGLTPED  146 (323)
T ss_pred             -cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhh-eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHhhhcCCCCCC
Confidence             567789999999975         7899999999998 9999 9985554 57788889999998875443  378898


Q ss_pred             -EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          159 -YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 -~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                       +|+|+|++|++|.+++++|+.+|++++++++++++.          +.++ ++|++.+++..+. +.  .++..+.+++
T Consensus       147 ~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~  212 (323)
T TIGR02823       147 GPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEE----------DYLK-ELGASEVIDREDL-SP--PGKPLEKERW  212 (323)
T ss_pred             ceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHH----------HHHH-hcCCcEEEccccH-HH--HHHHhcCCCc
Confidence             999999999999999999999999999999888887          8887 8999888876543 22  4455554479


Q ss_pred             cEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHHHHH
Q 018404          238 DIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLPYIR  316 (356)
Q Consensus       238 d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~  316 (356)
                      |.++||+|+..+..++++++++|+++.+|......     ...+...++.+++++.++..... .....+.++.+.+++.
T Consensus       213 d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (323)
T TIGR02823       213 AGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGPD-----LPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLK  287 (323)
T ss_pred             eEEEECccHHHHHHHHHHhCCCCEEEEEcccCCCC-----ccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhh
Confidence            99999999988999999999999999999753211     11233445578888888654422 2223445677778888


Q ss_pred             cCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          317 EGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       317 ~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      .+.+++. ...++++++++|++.+.+++..||+|+++
T Consensus       288 ~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       288 PRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             cCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            8888764 45899999999999999999999999863

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=7.9e-36  Score=279.08  Aligned_cols=304  Identities=20%  Similarity=0.163  Sum_probs=246.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCC-CCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEE-GSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~-~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      ||++++.++  +.     +.+  .++|.| .+ .+++|+||+.++++|+.|+....+......+|.++|||+  +|+|++
T Consensus         1 ~ka~~~~~~--~~-----~~~--~~~~~p-~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~--~G~V~~   68 (347)
T cd05278           1 MKALVYLGP--GK-----IGL--EEVPDP-KIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEF--VGEVVE   68 (347)
T ss_pred             CceEEEecC--Cc-----eEE--EEcCCC-CCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccce--EEEEEE
Confidence            578888775  32     344  456666 67 899999999999999999987763333355578999985  899999


Q ss_pred             ecCCCCCCCCCCEEEE---------------------------------ccccceeEeecCC--CcceeecCCCCCccch
Q 018404           89 VDSGHPEFKKGDLVWG---------------------------------TTGWEEYSLIKNP--QGLFKIHHTDVPLSYY  133 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~l~~~~p~~~~~~~~  133 (356)
                      +|++++++++||+|++                                 .|+|++|++++.+  . ++++ |++++.. +
T Consensus        69 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P~~~~~~-~  145 (347)
T cd05278          69 VGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMN-LAKI-PDGLPDE-D  145 (347)
T ss_pred             ECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCe-EEEC-CCCCCHH-H
Confidence            9999999999999987                                 2789999999987  6 9999 9995554 5


Q ss_pred             hcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          134 TGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       134 ~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      ++.++.+++|||+++ ...++.++++|+|.| +|++|.+++|+|+.+|+ +|+++++++++.          +.++ ++|
T Consensus       146 aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~----------~~~~-~~g  212 (347)
T cd05278         146 ALMLSDILPTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERL----------DLAK-EAG  212 (347)
T ss_pred             Hhhhcchhhheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHH----------HHHH-HhC
Confidence            788899999999998 668899999999976 69999999999999997 899888887776          7777 899


Q ss_pred             CCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcc
Q 018404          213 FDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRI  290 (356)
Q Consensus       213 ~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  290 (356)
                      .+.++++.+. ++.+.+++.+++ ++|++|||+|+ ..+..++++|+++|+++.+|.......     .......+.+++
T Consensus       213 ~~~vi~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~  286 (347)
T cd05278         213 ATDIINPKNG-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDP-----LPLLGEWFGKNL  286 (347)
T ss_pred             CcEEEcCCcc-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcc-----cCccchhhhcee
Confidence            9899988876 777888887775 89999999998 788999999999999999986432210     001122345677


Q ss_pred             eeeceeeecchhhHHHHHHHHHHHHHcCCCccc--eeeeeCCCcHHHHHHHHHcCCC-cceEEEE
Q 018404          291 RMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYV--EDVADGLENAPAALVGLFSGRN-VGKQLVV  352 (356)
Q Consensus       291 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~--i~~~~~l~~~~~a~~~~~~~~~-~gk~vv~  352 (356)
                      ++.+.....     .+.++++++++.+|.+++.  +...++++++++|++.+..++. .+|+|++
T Consensus       287 ~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         287 TFKTGLVPV-----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             EEEeeccCc-----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence            666543322     5678899999999999864  5677899999999999988776 6788875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.6e-35  Score=280.80  Aligned_cols=305  Identities=20%  Similarity=0.176  Sum_probs=245.6

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCC-CCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEE-GSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~-~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++.++       ..+++  .++|.| .+ ++++|+||+.++++|++|+....+......+|.++|||+  +|+|++
T Consensus         1 m~a~~~~~~-------~~~~~--~~~~~p-~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~--~G~V~~   68 (386)
T cd08283           1 MKALVWHGK-------GDVRV--EEVPDP-KIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEF--MGVVEE   68 (386)
T ss_pred             CeeEEEecC-------CCceE--EeCCCC-CCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccc--eEEEEE
Confidence            688998653       23455  456666 55 599999999999999999988764332344688999985  899999


Q ss_pred             ecCCCCCCCCCCEEEE--------------------------------------------------ccccceeEeecCC-
Q 018404           89 VDSGHPEFKKGDLVWG--------------------------------------------------TTGWEEYSLIKNP-  117 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~--------------------------------------------------~g~~~~~~~v~~~-  117 (356)
                      +|++++++++||+|++                                                  .|+|++|++++.+ 
T Consensus        69 vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~  148 (386)
T cd08283          69 VGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFAD  148 (386)
T ss_pred             eCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEccccc
Confidence            9999999999999976                                                  2688999999987 


Q ss_pred             -CcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhc
Q 018404          118 -QGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVW  195 (356)
Q Consensus       118 -~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~  195 (356)
                       . ++++ |++++.. ++++++..++|||+++ ..+++.+|++|+|+| +|++|++++++|+.+|+ +|+++++++++. 
T Consensus       149 ~~-~~~l-p~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~-  222 (386)
T cd08283         149 VG-PFKI-PDDLSDE-KALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERL-  222 (386)
T ss_pred             Ce-EEEC-CCCCCHH-HHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-
Confidence             6 9999 9995554 5778899999999999 778999999999996 79999999999999998 699999999988 


Q ss_pred             cccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCch----------------------HHHHH
Q 018404          196 LIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGK----------------------MLDAV  252 (356)
Q Consensus       196 ~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~----------------------~~~~~  252 (356)
                               +.++ +++...++++...+++.+.+.+.+.+ ++|++|||+|++                      .+..+
T Consensus       223 ---------~~~~-~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (386)
T cd08283         223 ---------EMAR-SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREA  292 (386)
T ss_pred             ---------HHHH-HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHH
Confidence                     8888 77434677776641377888888877 899999999853                      67889


Q ss_pred             HHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccc--eeeeeCC
Q 018404          253 LLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYV--EDVADGL  330 (356)
Q Consensus       253 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~--i~~~~~l  330 (356)
                      +++++++|+++.+|.....     ....+....+.+++++.+.....     .+.+++++++++++++.+.  +...|++
T Consensus       293 ~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~l~~g~l~~~~~~~~~~~l  362 (386)
T cd08283         293 IQAVRKGGTVSIIGVYGGT-----VNKFPIGAAMNKGLTLRMGQTHV-----QRYLPRLLELIESGELDPSFIITHRLPL  362 (386)
T ss_pred             HHHhccCCEEEEEcCCCCC-----cCccCHHHHHhCCcEEEeccCCc-----hHHHHHHHHHHHcCCCChhHceEEEecH
Confidence            9999999999999875432     11223345677888877764322     5678889999999999863  5678999


Q ss_pred             CcHHHHHHHHHcCC-CcceEEEE
Q 018404          331 ENAPAALVGLFSGR-NVGKQLVV  352 (356)
Q Consensus       331 ~~~~~a~~~~~~~~-~~gk~vv~  352 (356)
                      +++++|++.+.+++ ..+|+|++
T Consensus       363 ~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         363 EDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             HHHHHHHHHHHhCCCCeEEEEec
Confidence            99999999998876 45799985

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=2.4e-35  Score=274.95  Aligned_cols=303  Identities=20%  Similarity=0.235  Sum_probs=246.1

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +.+.    .+  .++|.| +++++||+||+.++++|++|+....+.. ....|.++|||+  +|+|+.+
T Consensus         1 mka~~~~~~--~~~~----~~--~~~~~p-~~~~~evlv~v~~~~i~~~d~~~~~g~~-~~~~~~~~g~e~--~G~V~~~   68 (338)
T PRK09422          1 MKAAVVNKD--HTGD----VV--VEKTLR-PLKHGEALVKMEYCGVCHTDLHVANGDF-GDKTGRILGHEG--IGIVKEV   68 (338)
T ss_pred             CeEEEecCC--CCCc----eE--EEecCC-CCCCCeEEEEEEEEeechhHHHHHcCCC-CCCCCccCCccc--ceEEEEE
Confidence            789999886  5552    35  456667 7899999999999999999988765322 123468899985  8999999


Q ss_pred             cCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCCCCccchhcccC
Q 018404           90 DSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILG  138 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~  138 (356)
                      |+++.+|++||+|++                               .|+|++|+.++... ++++ |++++.. ++++++
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~aa~l~  145 (338)
T PRK09422         69 GPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADY-AVKV-PEGLDPA-QASSIT  145 (338)
T ss_pred             CCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHH-eEeC-CCCCCHH-Heehhh
Confidence            999999999999986                               37899999999988 9999 9996555 688899


Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE
Q 018404          139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKL-MGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF  217 (356)
Q Consensus       139 ~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~-~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv  217 (356)
                      ..++|||+++ ..+.+++|++|+|+| +|++|++++++|+. +|++|+++++++++.          +.++ ++|++.++
T Consensus       146 ~~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~v~  212 (338)
T PRK09422        146 CAGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKL----------ALAK-EVGADLTI  212 (338)
T ss_pred             cchhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHH----------HHHH-HcCCcEEe
Confidence            9999999998 668899999999999 79999999999998 499999999999998          8898 99999898


Q ss_pred             ecCCcccHHHHHHHhCCCCcc-EEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeecee
Q 018404          218 NYKEENDLDAALKRCFPEGID-IYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFV  296 (356)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (356)
                      +++...++.+.+++.++ ++| +++++.++..+..++++++++|+++.+|....      ....+......++..+.++.
T Consensus       213 ~~~~~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~  285 (338)
T PRK09422        213 NSKRVEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGSL  285 (338)
T ss_pred             cccccccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEec
Confidence            88642266777777765 688 45555555889999999999999999986422      11223445556677776554


Q ss_pred             eecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          297 VFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       297 ~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ...     .+.++++++++++|.+.+.++ .++++++++|++.+.++...||+++.+
T Consensus       286 ~~~-----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        286 VGT-----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             CCC-----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEec
Confidence            333     567888999999999987655 579999999999999999999999875

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=2e-35  Score=275.14  Aligned_cols=305  Identities=23%  Similarity=0.269  Sum_probs=253.1

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      ||++++..+  +.|    + +...+.|.| .+++++|+|++.++++|+.|+...... ......|.++|+|+  +|+|+.
T Consensus         1 ~~~~~~~~~--~~~----~-~~~~~~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~--~G~v~~   70 (338)
T cd08254           1 MKAWRFHKG--SKG----L-LVLEEVPVP-EPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEI--AGTVVE   70 (338)
T ss_pred             CeeEEEecC--CCC----c-eEEeccCCC-CCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccc--cEEEEE
Confidence            689999887  666    2 344567777 789999999999999999999877632 22344578899985  899999


Q ss_pred             ecCCCCCCCCCCEEEE------------------------------ccccceeEeecCCCcceeecCCCCCccchhcccC
Q 018404           89 VDSGHPEFKKGDLVWG------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILG  138 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~  138 (356)
                      +|+++..+++||+|++                              .|+|++|+.++.+. ++++ |++++.. ++++++
T Consensus        71 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~a~~~~  147 (338)
T cd08254          71 VGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARA-LVPV-PDGVPFA-QAAVAT  147 (338)
T ss_pred             ECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHH-eEEC-CCCCCHH-Hhhhhc
Confidence            9999999999999986                              27899999999988 9999 9986554 578889


Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       139 ~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      .++.|||+++.....+.++++|||.| +|++|++++++|+.+|++|+++++++++.          +.++ ++|.+++++
T Consensus       148 ~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~----------~~~~-~~g~~~~~~  215 (338)
T cd08254         148 DAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKL----------ELAK-ELGADEVLN  215 (338)
T ss_pred             chHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHH----------HHHH-HhCCCEEEc
Confidence            99999999998888899999999976 79999999999999999999999998888          8888 899988888


Q ss_pred             cCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeecee
Q 018404          219 YKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFV  296 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (356)
                      +.+. ...+.+ +.+.+ ++|++|||+|. ..+..++++|+++|+++.+|.....      ...+...++.++.++.++.
T Consensus       216 ~~~~-~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~  287 (338)
T cd08254         216 SLDD-SPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDK------LTVDLSDLIARELRIIGSF  287 (338)
T ss_pred             CCCc-CHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCC------CccCHHHHhhCccEEEEec
Confidence            7765 666666 44554 89999999986 6889999999999999999864321      1133455677777777655


Q ss_pred             eecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          297 VFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       297 ~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ...     .+.+..++++++++.+.+. ...+++++++++++.+.+++..||+|+++
T Consensus       288 ~~~-----~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         288 GGT-----PEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             cCC-----HHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            443     5678889999999999876 56889999999999999999999999864

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=2e-35  Score=278.08  Aligned_cols=307  Identities=21%  Similarity=0.275  Sum_probs=249.6

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  |.+    +.+  .++|.| ++++++|+|++.++++|+.|+....+... ..+|.++|+|+  +|+|+.+
T Consensus         1 m~a~~~~~~--~~~----~~~--~~~~~p-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~--~G~V~~v   68 (363)
T cd08279           1 MRAAVLHEV--GKP----LEI--EEVELD-DPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEG--AGVVEEV   68 (363)
T ss_pred             CeEEEEecC--CCC----ceE--EEeeCC-CCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccc--eEEEEEe
Confidence            689999987  554    455  455566 78999999999999999999987663222 34567899885  8999999


Q ss_pred             cCCCCCCCCCCEEEE--------------------------------------------------ccccceeEeecCCCc
Q 018404           90 DSGHPEFKKGDLVWG--------------------------------------------------TTGWEEYSLIKNPQG  119 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~--------------------------------------------------~g~~~~~~~v~~~~~  119 (356)
                      |+++..+++||+|++                                                  .|+|++|+.++.+. 
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-  147 (363)
T cd08279          69 GPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEAS-  147 (363)
T ss_pred             CCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEecccc-
Confidence            999999999999987                                                  27899999999998 


Q ss_pred             ceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhcccc
Q 018404          120 LFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIP  198 (356)
Q Consensus       120 l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~  198 (356)
                      ++++ |++++.. +++.+++++.+||.++.....+.++++|+|+| +|++|++++++|+.+|++ |+++++++++.    
T Consensus       148 ~~~l-p~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~----  220 (363)
T cd08279         148 VVKI-DDDIPLD-RAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKL----  220 (363)
T ss_pred             EEEC-CCCCChH-HeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHH----
Confidence            9999 9996555 57788899999999988888899999999996 799999999999999996 99999988887    


Q ss_pred             chhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCC
Q 018404          199 MQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQP  276 (356)
Q Consensus       199 ~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  276 (356)
                            +.++ ++|++++++++.. ++...+.+.+.+ ++|++|||+|+ ..+..++++|+++|+++.+|.....    .
T Consensus       221 ------~~~~-~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~  288 (363)
T cd08279         221 ------ELAR-RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPG----E  288 (363)
T ss_pred             ------HHHH-HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCC----c
Confidence                  8887 8999999988775 778888888755 89999999996 7889999999999999999864321    1


Q ss_pred             ccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEE
Q 018404          277 EGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQL  350 (356)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~v  350 (356)
                      ....+...+..++..+.++.+..  ....+.+++++++++++.+++  .+...|+++++++|++.+.+++..+.++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         289 TVSLPALELFLSEKRLQGSLYGS--ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             ccccCHHHHhhcCcEEEEEEecC--cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            12234445555666666654422  122567899999999999986  3677899999999999998887765554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=2.1e-35  Score=275.44  Aligned_cols=303  Identities=16%  Similarity=0.148  Sum_probs=238.7

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +     .+.+  .++|.| ++++++++||+.++++|++|+..+.+......+|.++|||+  +|+|+.+
T Consensus         1 m~a~~~~~~--~-----~~~~--~~~~~p-~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~--~G~V~~v   68 (339)
T PRK10083          1 MKSIVIEKP--N-----SLAI--EERPIP-QPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEF--FGVIDAV   68 (339)
T ss_pred             CeEEEEecC--C-----eeEE--EeccCC-CCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccce--EEEEEEE
Confidence            578888764  2     2445  566767 78999999999999999999987763322234589999984  8999999


Q ss_pred             cCCCCCCCCCCEEE---------------------------Ec---cccceeEeecCCCcceeecCCCCCccchhcccCc
Q 018404           90 DSGHPEFKKGDLVW---------------------------GT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGM  139 (356)
Q Consensus        90 G~~v~~~~~Gd~V~---------------------------~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~  139 (356)
                      |++++.+++||+|+                           ++   |+|++|+.++... ++++ |++++.  ..+++..
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~--~~a~~~~  144 (339)
T PRK10083         69 GEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKN-AHRI-PDAIAD--QYAVMVE  144 (339)
T ss_pred             CCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHH-eEEC-cCCCCH--HHHhhhc
Confidence            99999999999998                           33   7899999999998 9999 998544  3344667


Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCCEEE
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKL-MGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF  217 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~-~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv  217 (356)
                      .+.++++++ ...++++|++|+|+| +|++|++++|+|+. +|++ ++++++++++.          +.++ ++|+++++
T Consensus       145 ~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~----------~~~~-~~Ga~~~i  211 (339)
T PRK10083        145 PFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERL----------ALAK-ESGADWVI  211 (339)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHH----------HHHH-HhCCcEEe
Confidence            788888655 668899999999999 79999999999996 6995 77777788887          8888 99999999


Q ss_pred             ecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeecee
Q 018404          218 NYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFV  296 (356)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (356)
                      ++++. ++.+.+... +.++|++|||+|+ ..+..++++|+++|+++.+|.....      ...+......+++++.+..
T Consensus       212 ~~~~~-~~~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~  283 (339)
T PRK10083        212 NNAQE-PLGEALEEK-GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEP------SEIVQQGITGKELSIFSSR  283 (339)
T ss_pred             cCccc-cHHHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------ceecHHHHhhcceEEEEEe
Confidence            88765 666666432 1157899999996 6899999999999999999975321      1123334445666655543


Q ss_pred             eecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcC-CCcceEEEEecC
Q 018404          297 VFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSG-RNVGKQLVVVSR  355 (356)
Q Consensus       297 ~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~-~~~gk~vv~~~~  355 (356)
                      .      ..+.++++++++++|.+++  .+++.|+++++++|++.+.++ ...+|+|+.+.+
T Consensus       284 ~------~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        284 L------NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             c------ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            2      1457889999999999987  377889999999999999865 456899998864

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=3.1e-35  Score=277.55  Aligned_cols=311  Identities=17%  Similarity=0.162  Sum_probs=244.3

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~   87 (356)
                      .+||+.++.+.  +++    +.+  .++|.| ++.+++|+||+.++++|++|++...+.. ...+|.++|||+  +|+|+
T Consensus         6 ~~~~a~~~~~~--~~~----~~l--~~~p~p-~~~~~~vlvkv~~~gi~~~D~~~~~g~~-~~~~p~v~G~e~--~G~V~   73 (373)
T cd08299           6 IKCKAAVLWEP--KKP----FSI--EEIEVA-PPKAHEVRIKIVATGICRSDDHVVSGKL-VTPFPVILGHEA--AGIVE   73 (373)
T ss_pred             ceeEEEEEecC--CCC----cEE--EEeecC-CCCCCEEEEEEEEEEcCcccHHHhcCCC-CCCCCccccccc--eEEEE
Confidence            45889888875  443    455  466666 7899999999999999999998876332 235678999995  89999


Q ss_pred             EecCCCCCCCCCCEEEEc---------------------------------------------------cccceeEeecC
Q 018404           88 VVDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYSLIKN  116 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~  116 (356)
                      ++|+++..+++||+|+++                                                   |+|+||+++++
T Consensus        74 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~  153 (373)
T cd08299          74 SVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDE  153 (373)
T ss_pred             EeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecc
Confidence            999999999999999863                                                   68999999999


Q ss_pred             CCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhc
Q 018404          117 PQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVW  195 (356)
Q Consensus       117 ~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~  195 (356)
                      +. ++++ |++++.. +++.+++++.|||+++...+.+++|++|+|+| +|++|++++++|+.+|+ +|++++++++++ 
T Consensus       154 ~~-~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~-  228 (373)
T cd08299         154 IA-VAKI-DAAAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKF-  228 (373)
T ss_pred             cc-eeeC-CCCCChH-HhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-
Confidence            98 9999 9996555 67788889999999987778999999999996 79999999999999999 899999999998 


Q ss_pred             cccchhHHHHHHHhhcCCCEEEecCCcc-cHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhh-ccCCeEEEEccccccC
Q 018404          196 LIPMQSQLVELLKNKFGFDDAFNYKEEN-DLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNM-RLHGRIAACGMISQYN  272 (356)
Q Consensus       196 ~~~~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~  272 (356)
                               +.++ ++|+++++++.+.. ++.+.+.+.+.+++|++|||+|+ ..+..++..+ +++|+++.+|..... 
T Consensus       229 ---------~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~-  297 (373)
T cd08299         229 ---------AKAK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS-  297 (373)
T ss_pred             ---------HHHH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC-
Confidence                     8888 89999888876531 36667777666689999999997 6777767655 579999999975321 


Q ss_pred             CCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcceEE
Q 018404          273 LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGKQL  350 (356)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk~v  350 (356)
                         ........ .+.++.++.+++...+..  .+.+.++++.+.++.++  +.+++.|+++++.+|++.+.+++. .|++
T Consensus       298 ---~~~~~~~~-~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~  370 (373)
T cd08299         298 ---QNLSINPM-LLLTGRTWKGAVFGGWKS--KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTV  370 (373)
T ss_pred             ---ceeecCHH-HHhcCCeEEEEEecCCcc--HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEE
Confidence               01112222 234677888877655321  34566677777776543  457889999999999999887664 4777


Q ss_pred             EEe
Q 018404          351 VVV  353 (356)
Q Consensus       351 v~~  353 (356)
                      +.+
T Consensus       371 ~~~  373 (373)
T cd08299         371 LTF  373 (373)
T ss_pred             EeC
Confidence            753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.1e-35  Score=274.15  Aligned_cols=302  Identities=19%  Similarity=0.190  Sum_probs=246.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||++++++  +     .+.+  .+++.| .+++++++|+|.++++|+.|+...........+|.++|+|+  +|+|+.+
T Consensus         1 ~~a~~~~~~--~-----~~~~--~~~~~~-~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~--~G~V~~~   68 (337)
T cd08261           1 MKALVCEKP--G-----RLEV--VDIPEP-VPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHEL--SGEVVEV   68 (337)
T ss_pred             CeEEEEeCC--C-----ceEE--EECCCC-CCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCccccccc--EEEEEEe
Confidence            588999764  3     2344  566666 78999999999999999999987763332334578899885  8999999


Q ss_pred             cCCCCCCCCCCEEEE------------------------------ccccceeEeecCCCcceeecCCCCCccchhcccCc
Q 018404           90 DSGHPEFKKGDLVWG------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGM  139 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~  139 (356)
                      |++++.+++||+|++                              .|+|++|+.++++  ++++ |++++.. +++.+ .
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~-p~~~~~~-~aa~~-~  143 (337)
T cd08261          69 GEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD--ALLV-PEGLSLD-QAALV-E  143 (337)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh--eEEC-CCCCCHH-Hhhhh-c
Confidence            999999999999986                              3789999999986  8999 9995544 45544 6


Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      .++++++++ ...++.+|++|||+| +|++|.+++|+|+.+|++|+++++++++.          +.++ ++|.++++++
T Consensus       144 ~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~----------~~~~-~~g~~~v~~~  210 (337)
T cd08261         144 PLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERL----------EFAR-ELGADDTINV  210 (337)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHH----------HHHH-HhCCCEEecC
Confidence            788999888 678999999999996 79999999999999999999999888887          8887 8999999998


Q ss_pred             CCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceee
Q 018404          220 KEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV  297 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (356)
                      .+. ++.+.+.+.+++ ++|++|||+|+ ..+..++++|+++|+++.+|.....      .......+..+++++.+...
T Consensus       211 ~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~------~~~~~~~~~~~~~~~~~~~~  283 (337)
T cd08261         211 GDE-DVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGP------VTFPDPEFHKKELTILGSRN  283 (337)
T ss_pred             ccc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCC------CccCHHHHHhCCCEEEEecc
Confidence            876 788888888776 89999999987 7889999999999999999864311      11223345556676655421


Q ss_pred             ecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcC-CCcceEEEEe
Q 018404          298 FDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSG-RNVGKQLVVV  353 (356)
Q Consensus       298 ~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~-~~~gk~vv~~  353 (356)
                           ...+.++++++++++|.+++  .+...++++++++|++.+.++ ...+|+|+++
T Consensus       284 -----~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         284 -----ATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             -----CChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence                 23567888999999999997  677789999999999999988 4778999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.3e-35  Score=272.47  Aligned_cols=309  Identities=25%  Similarity=0.290  Sum_probs=258.9

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||++++.+  +.+.  .+.+  .+.+.| .+++++++|++.++++|++|+...... ......|.++|||+  +|+|+.
T Consensus         1 ~~a~~~~~~--~~~~--~~~~--~~~~~~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~--~G~v~~   71 (336)
T cd08276           1 MKAWRLSGG--GGLD--NLKL--VEEPVP-EPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDG--AGEVVA   71 (336)
T ss_pred             CeEEEEecc--CCCc--ceEE--EeccCC-CCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccce--eEEEEE
Confidence            789999876  5543  3455  455556 688999999999999999999876522 22333578899985  899999


Q ss_pred             ecCCCCCCCCCCEEEEc------------------------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHH
Q 018404           89 VDSGHPEFKKGDLVWGT------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTA  144 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA  144 (356)
                      +|+++.++++||+|++.                        |+|++|+.++.+. ++++ |+++++. +++.++..+.+|
T Consensus        72 ~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~a~~~~~~~~~a  148 (336)
T cd08276          72 VGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEG-LVRA-PDHLSFE-EAATLPCAGLTA  148 (336)
T ss_pred             eCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHH-eEEC-CCCCCHH-HhhhhhHHHHHH
Confidence            99999999999999874                        5799999999988 9999 8985554 577788999999


Q ss_pred             HHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCC-cc
Q 018404          145 WAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE-EN  223 (356)
Q Consensus       145 ~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~  223 (356)
                      |+++.....+++|++|+|+| +|++|++++++++.+|++|+++++++++.          +.++ ++|.+.+++... . 
T Consensus       149 ~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~~-  215 (336)
T cd08276         149 WNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKL----------ERAK-ALGADHVINYRTTP-  215 (336)
T ss_pred             HHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HcCCCEEEcCCccc-
Confidence            99998878899999999995 89999999999999999999999998888          8888 789888888766 4 


Q ss_pred             cHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchh
Q 018404          224 DLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP  302 (356)
Q Consensus       224 ~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (356)
                      ++.+.+.+.+++ ++|++|||+|+..+..++++++++|+++.+|..+..     .........+.+++++.++....   
T Consensus       216 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~---  287 (336)
T cd08276         216 DWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS---  287 (336)
T ss_pred             CHHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc---
Confidence            678888888876 999999999988899999999999999999974432     11234566778999988877654   


Q ss_pred             hHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          303 QYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       303 ~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                        .+.+++++++++++.+.+.+...+++++++++++.+.+++..+|+++++
T Consensus       288 --~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         288 --RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             --HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence              5678889999999998877778899999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=5.5e-35  Score=273.28  Aligned_cols=304  Identities=18%  Similarity=0.112  Sum_probs=245.6

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccC-CCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVE-EGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~-~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++.++  +.     +.+  .+.|.| + +.+++|+||+.++++|++|+..+.+......+|.++|||+  +|+|++
T Consensus         1 m~a~~~~~~--~~-----~~~--~~~~~p-~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~--~G~V~~   68 (345)
T cd08286           1 MKALVYHGP--GK-----ISW--EDRPKP-TIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEG--VGVVEE   68 (345)
T ss_pred             CceEEEecC--Cc-----eeE--EecCCC-CCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccc--eEEEEE
Confidence            678998765  32     345  456666 5 4899999999999999999988764333344578999985  899999


Q ss_pred             ecCCCCCCCCCCEEEEc-------------------------------cccceeEeecCC--CcceeecCCCCCccchhc
Q 018404           89 VDSGHPEFKKGDLVWGT-------------------------------TGWEEYSLIKNP--QGLFKIHHTDVPLSYYTG  135 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~--~~l~~~~p~~~~~~~~~a  135 (356)
                      +|++++++++||+|++.                               |+|++|+.++.+  . ++++ |++++.. +++
T Consensus        69 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-p~~~~~~-~aa  145 (345)
T cd08286          69 VGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNS-LYKL-PEGVDEE-AAV  145 (345)
T ss_pred             eccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCc-eEEC-CCCCCHH-Hhh
Confidence            99999999999999873                               788999999987  6 9999 9985554 577


Q ss_pred             ccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCC
Q 018404          136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD  214 (356)
Q Consensus       136 ~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  214 (356)
                      .++..++|||.++....++.++++|+|+| +|++|.+++|+|+.+| .+|+++++++++.          +.++ ++|++
T Consensus       146 ~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~----------~~~~-~~g~~  213 (345)
T cd08286         146 MLSDILPTGYECGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRL----------EVAK-KLGAT  213 (345)
T ss_pred             hccchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH----------HHHH-HhCCC
Confidence            88899999999877778899999999987 6999999999999999 6999988888887          7788 89999


Q ss_pred             EEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhccee
Q 018404          215 DAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRM  292 (356)
Q Consensus       215 ~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (356)
                      .++++.+. ++...+.+.+.+ ++|++|||+|+ ..+..++++|+++|+++.+|....      ....+...++.+++++
T Consensus       214 ~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~  286 (345)
T cd08286         214 HTVNSAKG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITI  286 (345)
T ss_pred             ceeccccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEE
Confidence            99998765 777778877766 89999999997 688899999999999999986321      1223445557788887


Q ss_pred             eceeeecchhhHHHHHHHHHHHHHcCCCccc--eeeeeCCCcHHHHHHHHHcCCC--cceEEEEe
Q 018404          293 EGFVVFDYFPQYSRFLDAVLPYIREGKVVYV--EDVADGLENAPAALVGLFSGRN--VGKQLVVV  353 (356)
Q Consensus       293 ~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~--i~~~~~l~~~~~a~~~~~~~~~--~gk~vv~~  353 (356)
                      .+....      .+.+++++++++++.+++.  +.++++++++++|++.+.....  ..|+|+++
T Consensus       287 ~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         287 TTGLVD------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             EeecCc------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            764221      2467888899999998753  6788999999999999886543  34888864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.4e-35  Score=270.55  Aligned_cols=302  Identities=25%  Similarity=0.287  Sum_probs=244.4

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++..+  +++    +.+  .++|.| ++.+++|+|++.++++|+.|+....+.......|.++|||+  +|+|+.+
T Consensus         1 m~a~~~~~~--~~~----~~~--~~~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~--~G~v~~~   69 (332)
T cd08259           1 MKAAILHKP--NKP----LQI--EEVPDP-EPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEI--VGTVEEV   69 (332)
T ss_pred             CeEEEEecC--CCc----eEE--EEccCC-CCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccc--eEEEEEE
Confidence            578998763  232    344  466777 78999999999999999999987764333344578999985  8999999


Q ss_pred             cCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhcccCc
Q 018404           90 DSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGM  139 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~  139 (356)
                      |++++++++||+|+++                              |+|++|++++... ++++ |++++.. +++.+++
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~~~~~~~  146 (332)
T cd08259          70 GEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERS-LVKL-PDNVSDE-SAALAAC  146 (332)
T ss_pred             CCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhh-eEEC-CCCCCHH-HHhhhcc
Confidence            9999999999999974                              6899999999998 9999 9986554 5788899


Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      .+.+||+++.. +.+.++++++|+|++|++|++++++++.+|++|+++++++++.          +.++ +++.+.+++.
T Consensus       147 ~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~~~~~~~~~  214 (332)
T cd08259         147 VVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKL----------KILK-ELGADYVIDG  214 (332)
T ss_pred             HHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH----------HHHH-HcCCcEEEec
Confidence            99999999977 8899999999999999999999999999999999999888887          7777 8888777754


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeec
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFD  299 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (356)
                      .   ++.+.+.+..  ++|++|+|+|......++++++++|+++.+|.......     .........++..+.+.... 
T Consensus       215 ~---~~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-  283 (332)
T cd08259         215 S---KFSEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPA-----PLRPGLLILKEIRIIGSISA-  283 (332)
T ss_pred             H---HHHHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCc-----CCCHHHHHhCCcEEEEecCC-
Confidence            3   2455555543  69999999999889999999999999999987433211     11222233466665554322 


Q ss_pred             chhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          300 YFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       300 ~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                          ..+.++++++++++|.+++.+.+.++++++++|++.+.+++..||+|++
T Consensus       284 ----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         284 ----TKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             ----CHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence                2567888999999999998888899999999999999998888998863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=5.6e-35  Score=275.19  Aligned_cols=307  Identities=18%  Similarity=0.221  Sum_probs=245.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      +||+++.++  +++    +.++  +++.| ++++++|+||+.++++|++|++...... ...+|.++|||+  +|+|+++
T Consensus         1 ~~a~~~~~~--~~~----~~~~--~~~~p-~~~~~~vlv~v~~~~i~~~d~~~~~g~~-~~~~~~i~g~e~--~G~V~~v   68 (365)
T cd05279           1 CKAAVLWEK--GKP----LSIE--EIEVA-PPKAGEVRIKVVATGVCHTDLHVIDGKL-PTPLPVILGHEG--AGIVESI   68 (365)
T ss_pred             CceeEEecC--CCC----cEEE--EeecC-CCCCCeEEEEEEEeeecchhHHHhcCCC-CCCCCcccccce--eEEEEEe
Confidence            468888875  433    4564  55555 7899999999999999999998776332 234678999995  8999999


Q ss_pred             cCCCCCCCCCCEEEEc---------------------------------------------------cccceeEeecCCC
Q 018404           90 DSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYSLIKNPQ  118 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~~~  118 (356)
                      |++++.+++||+|++.                                                   |+|++|+.++.+.
T Consensus        69 G~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  148 (365)
T cd05279          69 GPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEIS  148 (365)
T ss_pred             CCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCc
Confidence            9999999999999864                                                   5899999999998


Q ss_pred             cceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccc
Q 018404          119 GLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLI  197 (356)
Q Consensus       119 ~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~  197 (356)
                       ++++ |+++++. +++.+.+++.+||+++.+.+.+.+|++|+|+| +|++|++++++|+.+|++ |+++++++++.   
T Consensus       149 -~~~l-P~~~~~~-~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~---  221 (365)
T cd05279         149 -LAKI-DPDAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKF---  221 (365)
T ss_pred             -eEEC-CCCCCHH-HhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHH---
Confidence             9999 9996655 57778889999999988888999999999996 799999999999999995 77777788887   


Q ss_pred             cchhHHHHHHHhhcCCCEEEecCCcc-cHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhc-cCCeEEEEccccccCCC
Q 018404          198 PMQSQLVELLKNKFGFDDAFNYKEEN-DLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMR-LHGRIAACGMISQYNLS  274 (356)
Q Consensus       198 ~~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~  274 (356)
                             +.++ ++|+++++++.+.+ ++.+.+++.+++++|++||++|. ..+..++++++ ++|+++.+|.....   
T Consensus       222 -------~~~~-~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---  290 (365)
T cd05279         222 -------EKAK-QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSG---  290 (365)
T ss_pred             -------HHHH-HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCC---
Confidence                   8887 99998888876531 45667777775699999999986 78899999999 99999999864211   


Q ss_pred             CCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          275 QPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                       .....+...+ .++.++.|.+...+.  ..+.+.+++++++++.+.+  .+.++|+++++++|++.+.+++.. |+++
T Consensus       291 -~~~~~~~~~~-~~~~~l~g~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         291 -TEATLDPNDL-LTGRTIKGTVFGGWK--SKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             -CceeeCHHHH-hcCCeEEEEeccCCc--hHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence             1122344444 566777776544331  2567888999999999875  477889999999999998876654 6554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=5.6e-35  Score=272.98  Aligned_cols=307  Identities=22%  Similarity=0.267  Sum_probs=246.9

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +     .+.+  .+.|.| +++++||+||+.++++|+.|+....... ...+|.++|+|  ++|+|+.+
T Consensus         1 ~~a~~~~~~--~-----~l~~--~~~~~~-~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~--~~G~V~~~   67 (343)
T cd08236           1 MKALVLTGP--G-----DLRY--EDIPKP-EPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHE--FSGTVEEV   67 (343)
T ss_pred             CeeEEEecC--C-----ceeE--EecCCC-CCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcc--eEEEEEEE
Confidence            689999885  2     2455  455666 7899999999999999999998765322 22356889988  58999999


Q ss_pred             cCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhcccCc
Q 018404           90 DSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGM  139 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~  139 (356)
                      |+++..+++||+|+++                              |+|++|+.++++. ++++ |++++.. +++.+ .
T Consensus        68 g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-P~~~~~~-~aa~~-~  143 (343)
T cd08236          68 GSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARN-LIKI-PDHVDYE-EAAMI-E  143 (343)
T ss_pred             CCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHH-eEEC-cCCCCHH-HHHhc-c
Confidence            9999999999999974                              7899999999998 9999 9985554 45555 6


Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      .+.|||+++. ...+.++++|+|+| +|.+|.+++|+|+.+|++ |+++++++++.          +.++ ++|++.+++
T Consensus       144 ~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~----------~~l~-~~g~~~~~~  210 (343)
T cd08236         144 PAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKL----------AVAR-ELGADDTIN  210 (343)
T ss_pred             hHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHH----------HHHH-HcCCCEEec
Confidence            7899999995 67899999999997 799999999999999997 99999888887          8887 899988998


Q ss_pred             cCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeecee
Q 018404          219 YKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFV  296 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (356)
                      +++. . .+.+.+..++ ++|++|||+|+ ..+..++++|+++|+++.+|..... .  ..........+.+++++.++.
T Consensus       211 ~~~~-~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~  285 (343)
T cd08236         211 PKEE-D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD-V--TLSEEAFEKILRKELTIQGSW  285 (343)
T ss_pred             Cccc-c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC-c--ccccCCHHHHHhcCcEEEEEe
Confidence            8775 5 6677777766 89999999987 6889999999999999999864321 0  011223445567888888877


Q ss_pred             eecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHc-CCCcceEEE
Q 018404          297 VFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFS-GRNVGKQLV  351 (356)
Q Consensus       297 ~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~-~~~~gk~vv  351 (356)
                      .........+.+++++++++++.+.  +.+...+++++++++++.+.+ +...||+|+
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         286 NSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             eccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            6443223356788899999999986  446678899999999999998 667788874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=6.8e-35  Score=271.52  Aligned_cols=313  Identities=20%  Similarity=0.191  Sum_probs=251.5

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  |.+. +...+...++|.| .+.+++|+||+.++++|++|+...........+|.++|||.  +|+|+.+
T Consensus         1 ~~~~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~--~G~v~~~   74 (336)
T cd08252           1 MKAIGFTQP--LPIT-DPDSLIDIELPKP-VPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDA--SGVVEAV   74 (336)
T ss_pred             CceEEecCC--CCCC-cccceeEccCCCC-CCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccce--EEEEEEc
Confidence            579999887  7663 1112444567777 68899999999999999999887653322334567899985  8999999


Q ss_pred             cCCCCCCCCCCEEEEc------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCC-----CC
Q 018404           90 DSGHPEFKKGDLVWGT------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKK-----GE  158 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~-----g~  158 (356)
                      |+++..+++||+|+++      |+|++|+.++... ++++ |++++.. +++.++..+.|||+++.+.+.+.+     |+
T Consensus        75 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~  151 (336)
T cd08252          75 GSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERI-VGHK-PKSLSFA-EAAALPLTSLTAWEALFDRLGISEDAENEGK  151 (336)
T ss_pred             CCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHH-eeeC-CCCCCHH-HhhhhhhHHHHHHHHHHHhcCCCCCcCCCCC
Confidence            9999999999999986      6899999999988 9999 8885554 577889999999999888888887     99


Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|+|+|++|++|++++++|+.+| ++|++++++.++.          +.++ ++|+++++++..  ++.+.+....++++
T Consensus       152 ~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~  218 (336)
T cd08252         152 TLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESI----------AWVK-ELGADHVINHHQ--DLAEQLEALGIEPV  218 (336)
T ss_pred             EEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhH----------HHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCC
Confidence            99999999999999999999999 9999999998888          8888 899988888764  56666665443489


Q ss_pred             cEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-------hhhHHHHHH
Q 018404          238 DIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-------FPQYSRFLD  309 (356)
Q Consensus       238 d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~  309 (356)
                      |++|||+|+ ..+..++++++++|+++.+|...        ...+...++.+++++.+..+...       +......++
T Consensus       219 d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (336)
T cd08252         219 DYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILN  290 (336)
T ss_pred             CEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeeccccccccchhhHHHHHH
Confidence            999999996 78999999999999999998632        11223334467888877554321       113346788


Q ss_pred             HHHHHHHcCCCccceee---eeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          310 AVLPYIREGKVVYVEDV---ADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       310 ~~~~~~~~g~l~~~i~~---~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ++++++.+|.+++.+.+   .++++++++|++.+.++...||++++
T Consensus       291 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         291 EVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            89999999999876433   46999999999999999888998863

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4.1e-35  Score=273.32  Aligned_cols=298  Identities=18%  Similarity=0.204  Sum_probs=244.5

Q ss_pred             cEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEec
Q 018404           11 KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVD   90 (356)
Q Consensus        11 ~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~vG   90 (356)
                      |+++.++.  + .   .+.+  .+++.| +++++||+||+.++++|++|++...+......+|.++|||+  +|+|+++|
T Consensus         1 ~~~~~~~~--~-~---~~~~--~~~~~p-~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~--~G~V~~vG   69 (337)
T cd05283           1 KGYAARDA--S-G---KLEP--FTFERR-PLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEI--VGIVVAVG   69 (337)
T ss_pred             CceEEecC--C-C---CceE--EeccCC-CCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcce--eeEEEEEC
Confidence            56777774  2 3   3455  556666 88999999999999999999988764333445588999985  89999999


Q ss_pred             CCCCCCCCCCEEEE--------------------------------------ccccceeEeecCCCcceeecCCCCCccc
Q 018404           91 SGHPEFKKGDLVWG--------------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSY  132 (356)
Q Consensus        91 ~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~  132 (356)
                      ++++++++||+|+.                                      .|+|++|++++.+. ++++ |++++.. 
T Consensus        70 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-  146 (337)
T cd05283          70 SKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERF-VFKI-PEGLDSA-  146 (337)
T ss_pred             CCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhh-eEEC-CCCCCHH-
Confidence            99999999999972                                      27899999999998 9999 9996555 


Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      +++.+++.+.|||+++.. ..+++|++|+|.| .|++|++++++++.+|++|+++++++++.          +.++ ++|
T Consensus       147 ~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~----------~~~~-~~g  213 (337)
T cd05283         147 AAAPLLCAGITVYSPLKR-NGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKK----------EDAL-KLG  213 (337)
T ss_pred             HhhhhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHH----------HHHH-HcC
Confidence            577889999999999865 4589999999977 79999999999999999999999998888          8888 899


Q ss_pred             CCEEEecCCcccHHHHHHHhCCCCccEEEeCCCch-HHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcce
Q 018404          213 FDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIR  291 (356)
Q Consensus       213 ~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  291 (356)
                      ++.+++.... ++..   . .++++|++|||+|+. .+..++++|+++|+++.+|.....      ...+...++.++++
T Consensus       214 ~~~vi~~~~~-~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~  282 (337)
T cd05283         214 ADEFIATKDP-EAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRKS  282 (337)
T ss_pred             CcEEecCcch-hhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCceE
Confidence            9888876653 3322   1 234899999999996 589999999999999999875322      12344556678898


Q ss_pred             eeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          292 MEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       292 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      +.+.....     .+.++.+++++++|++++.+ ..|+++++++||+.+.+++..||+|++
T Consensus       283 i~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         283 VAGSLIGG-----RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             EEEecccC-----HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            88877664     56788999999999998765 578999999999999999999998874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=8.7e-35  Score=268.08  Aligned_cols=313  Identities=25%  Similarity=0.368  Sum_probs=256.8

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc-CCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF-NQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~-~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      ||++++.++  |.+.  .+.+.  +.+.| .+.+++++||+.++++|+.|+..... +......|.++|||+  +|+|+.
T Consensus         1 ~~~~~~~~~--~~~~--~~~~~--~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~--~G~v~~   71 (323)
T cd05276           1 MKAIVIKEP--GGPE--VLELG--EVPKP-APGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEV--AGVVVA   71 (323)
T ss_pred             CeEEEEecC--CCcc--cceEE--ecCCC-CCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCccccee--EEEEEe
Confidence            689999886  6553  34453  55555 68899999999999999999887652 222334578999984  899999


Q ss_pred             ecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecC
Q 018404           89 VDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAA  165 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga  165 (356)
                      +|+++..+++||+|+++   |+|++|+.++.+. ++++ |++++.. ++++++..+.+||+++.+...+.++++|+|+|+
T Consensus        72 vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~  148 (323)
T cd05276          72 VGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQ-LLPV-PEGLSLV-EAAALPEVFFTAWQNLFQLGGLKAGETVLIHGG  148 (323)
T ss_pred             eCCCCCCCCCCCEEEEecCCCceeEEEEcCHHH-hccC-CCCCCHH-HHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            99999999999999987   7999999999988 9999 9985444 577899999999999988888999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCC
Q 018404          166 SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHV  244 (356)
Q Consensus       166 ~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~  244 (356)
                      +|++|++++++++.+|++|+++++++++.          +.++ ++|.+.+++.... ++.+.+.+.+.+ ++|++||+.
T Consensus       149 ~~~ig~~~~~~~~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~  216 (323)
T cd05276         149 ASGVGTAAIQLAKALGARVIATAGSEEKL----------EACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMV  216 (323)
T ss_pred             cChHHHHHHHHHHHcCCEEEEEcCCHHHH----------HHHH-HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECC
Confidence            99999999999999999999999988887          8887 8898888887765 677777777665 899999999


Q ss_pred             CchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-----hhhHHHHHHHHHHHHHcCC
Q 018404          245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-----FPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       245 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~g~  319 (356)
                      |+..+..++++++++|+++.+|..+..+     .......++.+++++.++.....     +......++++++++.+++
T Consensus       217 g~~~~~~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (323)
T cd05276         217 GGDYLARNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGR  291 (323)
T ss_pred             chHHHHHHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCC
Confidence            9988889999999999999998754321     12234445578888887765432     2233456788889999999


Q ss_pred             CccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          320 VVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       320 l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      +++..+..|+++++++|++.+.++...||+++
T Consensus       292 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         292 IRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             ccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            98778888999999999999998888888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.4e-35  Score=272.91  Aligned_cols=301  Identities=20%  Similarity=0.206  Sum_probs=234.9

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCC-----------CCCCCCCCCC
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD-----------PDFSSFTPGS   78 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~-----------~~~~p~v~G~   78 (356)
                      |||+++.++    +    +++  .+++.| ++++++|+||+.++++|+.|+....+...           ...+|.++|+
T Consensus         1 m~a~~~~~~----~----~~~--~~~~~p-~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~   69 (341)
T cd08262           1 MRAAVFRDG----P----LVV--RDVPDP-EPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGH   69 (341)
T ss_pred             CceEEEeCC----c----eEE--EecCCC-CCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCccccc
Confidence            678888652    2    455  456666 78999999999999999999987763111           2234788998


Q ss_pred             cceecEEEEEecCCCCC-CCCCCEEEEc--------------------cccceeEeecCCCcceeecCCCCCccchhccc
Q 018404           79 PIEGFGVAKVVDSGHPE-FKKGDLVWGT--------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGIL  137 (356)
Q Consensus        79 e~~~~G~V~~vG~~v~~-~~~Gd~V~~~--------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l  137 (356)
                      |+  +|+|+++|+++++ +++||+|+++                    |+|++|++++.+. ++++ |+++++.  .+++
T Consensus        70 e~--~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~s~~--~a~~  143 (341)
T cd08262          70 EF--CGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEAL-LLRV-PDGLSME--DAAL  143 (341)
T ss_pred             ce--eEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHH-eEEC-CCCCCHH--Hhhh
Confidence            85  8999999999987 9999999985                    7899999999998 9999 9995443  3447


Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          138 GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       138 ~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +..+.+||+++ ..+++++|++|+|+| +|++|.+++|+|+.+|++ ++++++++++.          +.++ ++|++++
T Consensus       144 ~~~~~~a~~~~-~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~----------~~~~-~~g~~~~  210 (341)
T cd08262         144 TEPLAVGLHAV-RRARLTPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERR----------ALAL-AMGADIV  210 (341)
T ss_pred             hhhHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH----------HHHH-HcCCcEE
Confidence            78889999996 678999999999997 699999999999999996 66666677776          7777 8999888


Q ss_pred             EecCCcccHHH---HHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcce
Q 018404          217 FNYKEENDLDA---ALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIR  291 (356)
Q Consensus       217 v~~~~~~~~~~---~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  291 (356)
                      ++++.. +..+   .+.+.+.+ ++|++|||+|+ ..+..++++++++|+++.+|......      .........++++
T Consensus       211 i~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~------~~~~~~~~~~~~~  283 (341)
T cd08262         211 VDPAAD-SPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD------NIEPALAIRKELT  283 (341)
T ss_pred             EcCCCc-CHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCC------ccCHHHHhhcceE
Confidence            987653 3221   23444444 89999999998 58899999999999999998753210      1112222456666


Q ss_pred             eeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          292 MEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       292 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      +.+.....     .+.++++++++++|.+.+  .+.+.++++++++|++.+.+++..||+|++
T Consensus       284 ~~~~~~~~-----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         284 LQFSLGYT-----PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             EEEEeccc-----HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            65443322     457888999999999975  357889999999999999999999999874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.6e-35  Score=273.79  Aligned_cols=301  Identities=19%  Similarity=0.154  Sum_probs=239.2

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCC---------CCCCCCCCCCcc
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD---------PDFSSFTPGSPI   80 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~---------~~~~p~v~G~e~   80 (356)
                      |||++++++  +.     +.+  .+.|.| ++++++|+||+.++++|++|+..+.+...         ...+|.++||| 
T Consensus         1 mka~~~~~~--~~-----~~~--~~~~~p-~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e-   69 (350)
T cd08256           1 MRAVVCHGP--QD-----YRL--EEVPVP-RPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHE-   69 (350)
T ss_pred             CeeEEEecC--Cc-----eEE--EECCCC-CCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcc-
Confidence            689999764  32     355  456666 78999999999999999999887653211         11457789988 


Q ss_pred             eecEEEEEecCCCC--CCCCCCEEEE---------------------------c-----cccceeEeecCCCcceeecCC
Q 018404           81 EGFGVAKVVDSGHP--EFKKGDLVWG---------------------------T-----TGWEEYSLIKNPQGLFKIHHT  126 (356)
Q Consensus        81 ~~~G~V~~vG~~v~--~~~~Gd~V~~---------------------------~-----g~~~~~~~v~~~~~l~~~~p~  126 (356)
                       ++|+|+++|++++  ++++||+|++                           +     |+|++|+.++++..++++ |+
T Consensus        70 -~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~l-P~  147 (350)
T cd08256          70 -FVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKV-PD  147 (350)
T ss_pred             -eeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEEC-CC
Confidence             4899999999999  8999999986                           2     799999999988437899 99


Q ss_pred             CCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHH
Q 018404          127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVE  205 (356)
Q Consensus       127 ~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~  205 (356)
                      +++.. +++.+ .++.|+|+++ ..+++.+|++|+| +|+|++|++++++|+.+|++ ++++++++++.          +
T Consensus       148 ~~~~~-~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI-~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~----------~  213 (350)
T cd08256         148 DIPPE-DAILI-EPLACALHAV-DRANIKFDDVVVL-AGAGPLGLGMIGAARLKNPKKLIVLDLKDERL----------A  213 (350)
T ss_pred             CCCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHH----------H
Confidence            85554 45556 8889999998 6789999999999 55899999999999999985 66777777776          7


Q ss_pred             HHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchH
Q 018404          206 LLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLM  283 (356)
Q Consensus       206 ~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  283 (356)
                      .++ ++|++.++++... ++.+.+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....      ......
T Consensus       214 ~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~  285 (350)
T cd08256         214 LAR-KFGADVVLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP------VTVDWS  285 (350)
T ss_pred             HHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC------CccChh
Confidence            777 8999888888765 788888888777 89999999996 6788999999999999999863321      111222


Q ss_pred             HH-HhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccc--eeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          284 NV-VYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYV--EDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       284 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~--i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      .+ ..+++++.++...      ...+.++++++++|.+++.  +.+.|+++++++|++.+.+++..+|+|+
T Consensus       286 ~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         286 IIGDRKELDVLGSHLG------PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             HhhcccccEEEEeccC------chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            11 2456666665433      2357889999999999873  6788999999999999999888888874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=8.6e-35  Score=274.91  Aligned_cols=307  Identities=18%  Similarity=0.142  Sum_probs=241.4

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCC-CCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEE-GSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~-~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      ||++++.++     .    .++..++|.| .+ +++||+||+.++++|++|++...+... ..+|.++|||+  +|+|++
T Consensus         1 m~~~~~~~~-----~----~~~~~~~~~p-~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~--~G~V~~   67 (375)
T cd08282           1 MKAVVYGGP-----G----NVAVEDVPDP-KIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEA--MGEVEE   67 (375)
T ss_pred             CceEEEecC-----C----ceeEEeCCCC-CCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceecccc--EEEEEE
Confidence            578888553     2    2444566777 54 799999999999999999988763222 34578999985  899999


Q ss_pred             ecCCCCCCCCCCEEEE----------------------------------------ccccceeEeecCC--CcceeecCC
Q 018404           89 VDSGHPEFKKGDLVWG----------------------------------------TTGWEEYSLIKNP--QGLFKIHHT  126 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~--~~l~~~~p~  126 (356)
                      +|+++..+++||+|++                                        .|+|++|++++..  . ++++ |+
T Consensus        68 vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~-~~~l-P~  145 (375)
T cd08282          68 VGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFN-LLKL-PD  145 (375)
T ss_pred             eCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCc-EEEC-CC
Confidence            9999999999999986                                        1779999999975  6 9999 99


Q ss_pred             CCCccc--hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHH
Q 018404          127 DVPLSY--YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQL  203 (356)
Q Consensus       127 ~~~~~~--~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~  203 (356)
                      ++++..  .+++++..++|||+++ ..+.+.+|++|+|.| .|++|++++|+|+.+|+ +|+++++++++.         
T Consensus       146 ~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~---------  214 (375)
T cd08282         146 RDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERL---------  214 (375)
T ss_pred             CCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHH---------
Confidence            865542  3567888999999999 678899999999976 79999999999999998 899988888887         


Q ss_pred             HHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCch------------HHHHHHHhhccCCeEEEEcccccc
Q 018404          204 VELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK------------MLDAVLLNMRLHGRIAACGMISQY  271 (356)
Q Consensus       204 ~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~  271 (356)
                       +.++ ++|+ ..+++.+. ++.+.+.+.+++++|++|||+|+.            .+..++++++++|+++.+|.....
T Consensus       215 -~~~~-~~g~-~~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~  290 (375)
T cd08282         215 -DLAE-SIGA-IPIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAE  290 (375)
T ss_pred             -HHHH-HcCC-eEeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCc
Confidence             8888 8998 45677665 777788877666899999999985            488999999999999988864321


Q ss_pred             CCCC-------CccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccc--eeeeeCCCcHHHHHHHHHc
Q 018404          272 NLSQ-------PEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYV--EDVADGLENAPAALVGLFS  342 (356)
Q Consensus       272 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~--i~~~~~l~~~~~a~~~~~~  342 (356)
                      ....       .....+...++.++..+.+....     ..+.++.+++++.++++++.  +.+.++++++++|++.+.+
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~  365 (375)
T cd08282         291 DPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAP-----VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDK  365 (375)
T ss_pred             ccccccccccCccccccHHHHHhcCcEEEEecCC-----chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhc
Confidence            1110       01122344555566554443211     25678889999999999863  7889999999999999998


Q ss_pred             CCCcceEEEE
Q 018404          343 GRNVGKQLVV  352 (356)
Q Consensus       343 ~~~~gk~vv~  352 (356)
                      +. .+|+|++
T Consensus       366 ~~-~~kvvv~  374 (375)
T cd08282         366 RL-ETKVVIK  374 (375)
T ss_pred             CC-ceEEEeC
Confidence            88 8899875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=1.2e-34  Score=267.67  Aligned_cols=313  Identities=25%  Similarity=0.368  Sum_probs=258.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      ||++++.++  |.|.    .++..++|.| .+.+++|+|++.++++|++|+...... ......|.++|||+  +|+|+.
T Consensus         1 ~~~~~~~~~--~~~~----~~~~~~~~~~-~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~--~G~v~~   71 (325)
T cd08253           1 MRAIRYHEF--GAPD----VLRLGDLPVP-TPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDG--AGVVEA   71 (325)
T ss_pred             CceEEEccc--CCcc----cceeeecCCC-CCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccce--EEEEEe
Confidence            578888876  6553    3444577777 789999999999999999998876532 22344678999985  899999


Q ss_pred             ecCCCCCCCCCCEEEEc--------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEE
Q 018404           89 VDSGHPEFKKGDLVWGT--------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYI  160 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~V  160 (356)
                      +|++++++++||+|+++        |++++|+.++... ++++ |++++.. +++++++++.+||+++...+.+.+|++|
T Consensus        72 ~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~g~~v  148 (325)
T cd08253          72 VGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQ-LVPL-PDGVSFE-QGAALGIPALTAYRALFHRAGAKAGETV  148 (325)
T ss_pred             eCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHH-cEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhCCCCCCEE
Confidence            99999999999999974        6899999999988 9999 9985554 5788999999999999887899999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccE
Q 018404          161 YVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDI  239 (356)
Q Consensus       161 lI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~  239 (356)
                      +|+|+++++|++++++++.+|++|+++++++++.          +.++ ++|++.+++.... ++.+.+.+.+.+ ++|+
T Consensus       149 lI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~  216 (325)
T cd08253         149 LVHGGSGAVGHAAVQLARWAGARVIATASSAEGA----------ELVR-QAGADAVFNYRAE-DLADRILAATAGQGVDV  216 (325)
T ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HcCCCEEEeCCCc-CHHHHHHHHcCCCceEE
Confidence            9999999999999999999999999999998887          8887 8999888887765 777778877766 8999


Q ss_pred             EEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHHHHHcC
Q 018404          240 YFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLPYIREG  318 (356)
Q Consensus       240 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~g  318 (356)
                      +|+|.|+......+++++++|+++.+|....      ........++.++.++.+...... +....+.++.+.+++.++
T Consensus       217 vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (325)
T cd08253         217 IIEVLANVNLAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADG  290 (325)
T ss_pred             EEECCchHHHHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCC
Confidence            9999999888899999999999999987431      111223334667777766654332 334456778888899999


Q ss_pred             CCccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          319 KVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       319 ~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      .+++.+...+++++++++++.+.++...||++++
T Consensus       291 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~  324 (325)
T cd08253         291 ALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLD  324 (325)
T ss_pred             CccCccccEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence            9988778889999999999999998888999986

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=9.5e-35  Score=271.51  Aligned_cols=301  Identities=20%  Similarity=0.210  Sum_probs=242.8

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCC-CCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEE-GSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~-~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++..+  +     .+.+  .++|.| .+ ++++|+||+.++++|+.|+....+... ..+|.++|||+  +|+|++
T Consensus         1 ~~a~~~~~~--~-----~~~~--~~~~~p-~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~--~G~V~~   67 (344)
T cd08284           1 MKAVVFKGP--G-----DVRV--EEVPIP-QIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEF--VGEVVE   67 (344)
T ss_pred             CeeEEEecC--C-----CceE--EeccCC-CCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccce--EEEEEe
Confidence            578898653  1     2445  556666 55 599999999999999999877653222 34478899884  899999


Q ss_pred             ecCCCCCCCCCCEEEEc----------------------------------cccceeEeecCC--CcceeecCCCCCccc
Q 018404           89 VDSGHPEFKKGDLVWGT----------------------------------TGWEEYSLIKNP--QGLFKIHHTDVPLSY  132 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~----------------------------------g~~~~~~~v~~~--~~l~~~~p~~~~~~~  132 (356)
                      +|++++++++||+|++.                                  |+|++|+.++.+  . ++++ |+++++. 
T Consensus        68 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~~-p~~l~~~-  144 (344)
T cd08284          68 VGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGT-LLKL-PDGLSDE-  144 (344)
T ss_pred             eCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCc-eEEC-CCCCCHH-
Confidence            99999999999999972                                  789999999975  6 9999 9995554 


Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      ++++++++++|||+++.. ..+.+|++|+|+| +|++|++++++|+.+|+ +|+++++++++.          +.++ ++
T Consensus       145 ~a~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~----------~~~~-~~  211 (344)
T cd08284         145 AALLLGDILPTGYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERL----------ERAA-AL  211 (344)
T ss_pred             HhhhhcCchHHHHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHH----------HHHH-Hh
Confidence            678899999999999965 7889999999997 79999999999999997 899998887777          7777 88


Q ss_pred             CCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhc
Q 018404          212 GFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR  289 (356)
Q Consensus       212 g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  289 (356)
                      |+. .++++.. ++...+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....     .........+.++
T Consensus       212 g~~-~~~~~~~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~  284 (344)
T cd08284         212 GAE-PINFEDA-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAYNKN  284 (344)
T ss_pred             CCe-EEecCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHhhcC
Confidence            975 4666654 777888888776 99999999997 6889999999999999999975422     1123345567778


Q ss_pred             ceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          290 IRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      +++.+...     ...+.+++++++++++.+++  .+...++++++++|++.+.+++. +|+|++
T Consensus       285 ~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         285 LTLRFGRC-----PVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             cEEEEecC-----CcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence            87764321     12567899999999999885  36778999999999999988777 999874

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=8.5e-35  Score=271.60  Aligned_cols=304  Identities=21%  Similarity=0.248  Sum_probs=239.6

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC---CCCCCCCCCCCCcceecEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN---QDPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~---~~~~~~p~v~G~e~~~~G~V   86 (356)
                      ||++++.++  +.    .+++  .++|.| +++++||+||+.++++|++|+.++...   .....+|.++|||  ++|+|
T Consensus         1 ~~~~~~~~~--~~----~~~~--~~~~~p-~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e--~~G~V   69 (341)
T PRK05396          1 MKALVKLKA--EP----GLWL--TDVPVP-EPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHE--FVGEV   69 (341)
T ss_pred             CceEEEecC--CC----ceEE--EECCCC-CCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCccccee--eEEEE
Confidence            589999775  42    2344  566666 789999999999999999999865521   1123467899988  48999


Q ss_pred             EEecCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhcc
Q 018404           87 KVVDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGI  136 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~  136 (356)
                      +++|++++++++||+|++.                              |+|++|+.++.+. ++++ |++++.. ++ +
T Consensus        70 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-P~~l~~~-~~-~  145 (341)
T PRK05396         70 VEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFN-VWKI-PDDIPDD-LA-A  145 (341)
T ss_pred             EEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHH-eEEC-cCCCCHH-Hh-H
Confidence            9999999999999999974                              7899999999988 9999 9985443 33 3


Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD  215 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  215 (356)
                      +...+.++++++..  ...+|++|+|+| +|++|++++|+|+.+|+ +|+++++++++.          +.++ ++|+++
T Consensus       146 ~~~~~~~~~~~~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~----------~~~~-~lg~~~  211 (341)
T PRK05396        146 IFDPFGNAVHTALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRL----------ELAR-KMGATR  211 (341)
T ss_pred             hhhHHHHHHHHHHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHH----------HHHH-HhCCcE
Confidence            45666677666532  346899999987 79999999999999999 688888788887          7788 899999


Q ss_pred             EEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceee
Q 018404          216 AFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRME  293 (356)
Q Consensus       216 vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (356)
                      ++++++. ++.+.+.+.+.+ ++|++|||.|+ ..+..++++|+++|+++.+|..... .     .........+++++.
T Consensus       212 ~~~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~l~  284 (341)
T PRK05396        212 AVNVAKE-DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD-M-----AIDWNKVIFKGLTIK  284 (341)
T ss_pred             EecCccc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-C-----cccHHHHhhcceEEE
Confidence            9988775 788888888766 99999999987 6889999999999999999874321 1     122456667777777


Q ss_pred             ceeeecchhhHHHHHHHHHHHHHcC-CCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEec
Q 018404          294 GFVVFDYFPQYSRFLDAVLPYIREG-KVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       294 ~~~~~~~~~~~~~~l~~~~~~~~~g-~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      ++....+    .+.+..+++++.++ ++.+.+.+.++++++++|++.+.++. .||+|++++
T Consensus       285 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        285 GIYGREM----FETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             EEEccCc----cchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            6643221    34456788899998 56566778899999999999998876 799999764

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-34  Score=267.98  Aligned_cols=309  Identities=25%  Similarity=0.329  Sum_probs=254.4

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC-CCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ-DPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~-~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++.+.  +.+.  .+.+.  +.+.| ++.+++|+|++.++++|++|+....+.. ....+|.++|||+  +|+|+.
T Consensus         1 ~~a~~~~~~--~~~~--~~~~~--~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~--~G~v~~   71 (342)
T cd08266           1 MKAVVIRGH--GGPE--VLEYG--DLPEP-EPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDG--AGVVEA   71 (342)
T ss_pred             CeEEEEecC--CCcc--ceeEe--ecCCC-CCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccce--EEEEEE
Confidence            578988765  5553  44554  44555 7889999999999999999988776322 1234578899985  899999


Q ss_pred             ecCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhcccC
Q 018404           89 VDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILG  138 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~  138 (356)
                      +|+++.++++||+|++.                              |+|++|+.++.+. ++++ |+++++. +++.++
T Consensus        72 ~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~a~~~~  148 (342)
T cd08266          72 VGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARN-LLPI-PDNLSFE-EAAAAP  148 (342)
T ss_pred             eCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHH-ceeC-CCCCCHH-HHHhhh
Confidence            99999999999999874                              6799999999988 9999 8885554 577788


Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       139 ~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      ..+.+|++++.+...+.++++++|+|+++++|++++++++.+|++|+.+++++++.          +.++ .++.+.+++
T Consensus       149 ~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~----------~~~~-~~~~~~~~~  217 (342)
T cd08266         149 LTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKL----------ERAK-ELGADYVID  217 (342)
T ss_pred             hHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HcCCCeEEe
Confidence            89999999988888999999999999999999999999999999999999998887          7777 788877787


Q ss_pred             cCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceee
Q 018404          219 YKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV  297 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (356)
                      ..+. ++.+.+.+.+.+ ++|+++++.|...+..++++++++|+++.+|......     ........+.+++++.+...
T Consensus       218 ~~~~-~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  291 (342)
T cd08266         218 YRKE-DFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYE-----APIDLRHVFWRQLSILGSTM  291 (342)
T ss_pred             cCCh-HHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCC-----CCcCHHHHhhcceEEEEEec
Confidence            7664 666777776665 8999999999988999999999999999998754321     12333355677888777665


Q ss_pred             ecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          298 FDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       298 ~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ..     ...+.+++++++++.+++.+...|+++++++|++.+.++...+|+|++
T Consensus       292 ~~-----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  341 (342)
T cd08266         292 GT-----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLT  341 (342)
T ss_pred             CC-----HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence            54     567888999999999988888899999999999999888888999986

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=2.6e-34  Score=266.27  Aligned_cols=310  Identities=19%  Similarity=0.218  Sum_probs=245.6

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC-CCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ-DPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~-~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++.++  |.|+  .+.++  ++|.| ++++++|+||+.++++|++|.....+.. ....+|.++|||+  +|+|++
T Consensus         1 ~~a~~~~~~--~~~~--~~~~~--~~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~--~G~V~~   71 (324)
T cd08288           1 FKALVLEKD--DGGT--SAELR--ELDES-DLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDL--AGTVVE   71 (324)
T ss_pred             CeeEEEecc--CCCc--ceEEE--ECCCC-CCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccce--EEEEEe
Confidence            689999887  7663  45554  56666 7899999999999999999988765322 1233578899985  889988


Q ss_pred             ecCCCCCCCCCCEEEEc---------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHH--HcCCC-C
Q 018404           89 VDSGHPEFKKGDLVWGT---------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYE--ICAPK-K  156 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~--~~~~~-~  156 (356)
                        +++.++++||+|+++         |+|++|+.++.+. ++++ |++++.. +++.++..+++|+.++..  ..... +
T Consensus        72 --~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~  146 (324)
T cd08288          72 --SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADW-LVPL-PEGLSAR-QAMAIGTAGFTAMLCVMALEDHGVTPG  146 (324)
T ss_pred             --CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHH-eeeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhhcCcCCC
Confidence              777889999999984         7899999999998 9999 9986554 577888899999877641  13445 6


Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      +++|+|+|++|++|.+++|+|+.+|++|++++.++++.          +.++ ++|+++++++.+.   ...+...+.++
T Consensus       147 ~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~----------~~~~-~~g~~~~~~~~~~---~~~~~~~~~~~  212 (324)
T cd08288         147 DGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEA----------DYLR-SLGASEIIDRAEL---SEPGRPLQKER  212 (324)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHH----------HHHH-hcCCCEEEEcchh---hHhhhhhccCc
Confidence            78999999999999999999999999999999999988          8888 9999999987643   22555555557


Q ss_pred             ccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHHHH
Q 018404          237 IDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLPYI  315 (356)
Q Consensus       237 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~  315 (356)
                      +|.+||++|+..+..++..++.+|+++.+|.....+     .......++.+++++.++..... .....+.++.+++++
T Consensus       213 ~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (324)
T cd08288         213 WAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGAD-----LPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDL  287 (324)
T ss_pred             ccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCCC-----CCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHH
Confidence            899999999877888899999999999999753211     11233445578899888764433 223456788888899


Q ss_pred             HcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          316 REGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       316 ~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      .++.+.+ +...++++++++|++.+.+++..||+|+++
T Consensus       288 ~~~~~~~-i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         288 DPALLEA-LTREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             hcCCccc-cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            9998876 467899999999999999999999999863

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=1.7e-34  Score=269.63  Aligned_cols=304  Identities=21%  Similarity=0.222  Sum_probs=243.7

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +.     +.++  +.+.| ++.+++|+||+.++++|+.|+....+......+|.++|+|+  +|+|+++
T Consensus         1 ~~~~~~~~~--~~-----~~~~--~~~~~-~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~--~G~V~~~   68 (343)
T cd08235           1 MKAAVLHGP--ND-----VRLE--EVPVP-EPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEI--AGEIVEV   68 (343)
T ss_pred             CeEEEEecC--Cc-----eEEE--EccCC-CCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccce--EEEEEee
Confidence            579999775  42     4554  55556 78899999999999999999987763222234567899885  8999999


Q ss_pred             cCCCCCCCCCCEEEEc------------------------------cccceeEeecCCC----cceeecCCCCCccchhc
Q 018404           90 DSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQ----GLFKIHHTDVPLSYYTG  135 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~----~l~~~~p~~~~~~~~~a  135 (356)
                      |++++.+++||+|+++                              |+|++|+.++.+.    .++++ |++++.. +++
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~l-P~~~~~~-~aa  146 (343)
T cd08235          69 GDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKL-PDNVSFE-EAA  146 (343)
T ss_pred             CCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEEC-CCCCCHH-HHH
Confidence            9999999999999974                              7899999999742    28899 9995554 344


Q ss_pred             ccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCC
Q 018404          136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFD  214 (356)
Q Consensus       136 ~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  214 (356)
                      . ...+.+||+++.. .++++|++|+|+| +|++|++++|+|+.+|++ |+++++++++.          +.++ ++|.+
T Consensus       147 ~-~~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~----------~~~~-~~g~~  212 (343)
T cd08235         147 L-VEPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRL----------EFAK-KLGAD  212 (343)
T ss_pred             h-hhHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH----------HHHH-HhCCc
Confidence            4 4788999999965 5899999999997 799999999999999998 99898888887          8887 89999


Q ss_pred             EEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhccee
Q 018404          215 DAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRM  292 (356)
Q Consensus       215 ~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (356)
                      +++++++. ++.+.+.+.+++ ++|++|||+|+ ..+..++++|+++|+++.+|......    ...........+++.+
T Consensus       213 ~~~~~~~~-~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~l  287 (343)
T cd08235         213 YTIDAAEE-DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGS----TVNIDPNLIHYREITI  287 (343)
T ss_pred             EEecCCcc-CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCC----CcccCHHHHhhCceEE
Confidence            99988876 788888887776 89999999997 58899999999999999998643321    1122334455667766


Q ss_pred             eceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          293 EGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       293 ~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      .++....     .+.+++++++++++.++  +.+...++++++.+|++.+.+++ .||+|+.
T Consensus       288 ~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         288 TGSYAAS-----PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             EEEecCC-----hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence            6554333     46788899999999987  34667899999999999999988 8999873

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=5.1e-34  Score=262.61  Aligned_cols=312  Identities=25%  Similarity=0.326  Sum_probs=253.7

Q ss_pred             cEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEec
Q 018404           11 KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVD   90 (356)
Q Consensus        11 ~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~vG   90 (356)
                      ||+.+...  +.+.  .+.+  .+.+.| ++.+++++|++.++++|+.|+........ ..+|.++|||+  +|+|+.+|
T Consensus         1 ~~~~~~~~--~~~~--~~~~--~~~~~~-~~~~~~v~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~g~e~--~G~v~~~g   70 (320)
T cd05286           1 KAVRIHKT--GGPE--VLEY--EDVPVP-EPGPGEVLVRNTAIGVNFIDTYFRSGLYP-LPLPFVLGVEG--AGVVEAVG   70 (320)
T ss_pred             CeEEEecC--CCcc--ceEE--eecCCC-CCCCCEEEEEEEEeecCHHHHHHhcCCCC-CCCCccCCcce--eEEEEEEC
Confidence            46666654  4442  3444  345555 68899999999999999999987653221 24567899985  89999999


Q ss_pred             CCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCc
Q 018404           91 SGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASG  167 (356)
Q Consensus        91 ~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g  167 (356)
                      +++.++++||+|+++   |+|++|+.++.+. ++++ |++++.. ++++++..+++|++++....++.+|++|+|+|++|
T Consensus        71 ~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g  147 (320)
T cd05286          71 PGVTGFKVGDRVAYAGPPGAYAEYRVVPASR-LVKL-PDGISDE-TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAG  147 (320)
T ss_pred             CCCCCCCCCCEEEEecCCCceeEEEEecHHH-ceeC-CCCCCHH-HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence            999999999999985   6999999999988 9999 9985554 57778999999999998888999999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc
Q 018404          168 AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG  246 (356)
Q Consensus       168 ~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~  246 (356)
                      ++|++++++++.+|++|+++++++++.          +.++ ++|++.+++..+. ++.+.+.+.+.+ ++|++|+|+|+
T Consensus       148 ~~g~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~  215 (320)
T cd05286         148 GVGLLLTQWAKALGATVIGTVSSEEKA----------ELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGK  215 (320)
T ss_pred             hHHHHHHHHHHHcCCEEEEEcCCHHHH----------HHHH-HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECCCc
Confidence            999999999999999999999998888          8887 8999888887765 777888888776 89999999999


Q ss_pred             hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc---hhhHHHHHHHHHHHHHcCCCccc
Q 018404          247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY---FPQYSRFLDAVLPYIREGKVVYV  323 (356)
Q Consensus       247 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~g~l~~~  323 (356)
                      .....++++++++|+++.+|.....     ........+..+++++.++....+   +....+.+.++++++.++.+.+.
T Consensus       216 ~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (320)
T cd05286         216 DTFEGSLDSLRPRGTLVSFGNASGP-----VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE  290 (320)
T ss_pred             HhHHHHHHhhccCcEEEEEecCCCC-----CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc
Confidence            8889999999999999999874321     111223334477888765543322   33455677889999999999877


Q ss_pred             eeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          324 EDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       324 i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      +...|+++++++|++.+.++...+|+|++
T Consensus       291 ~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  319 (320)
T cd05286         291 IGKRYPLADAAQAHRDLESRKTTGKLLLI  319 (320)
T ss_pred             ccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            77889999999999999988888999875

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=2.5e-34  Score=269.55  Aligned_cols=319  Identities=20%  Similarity=0.207  Sum_probs=239.4

Q ss_pred             cEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCC-CCCCCCCCcceecEEEEEe
Q 018404           11 KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPD-FSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        11 ~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~-~~p~v~G~e~~~~G~V~~v   89 (356)
                      |++++.++  ++|    +.++..++|.|..+++++|+||+.++++|++|+.....+.... ..|.++|||+  +|+|+++
T Consensus         2 ~~~~~~~~--~~~----~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~--~G~V~~v   73 (352)
T cd08247           2 KALTFKNN--TSP----LTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDY--SGVIVKV   73 (352)
T ss_pred             ceEEEecC--CCc----ceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCcee--EEEEEEe
Confidence            58889887  777    4777778877633699999999999999999987764222111 2377899985  8999999


Q ss_pred             cCCCC-CCCCCCEEEEc--------cccceeEeecCC----CcceeecCCCCCccchhcccCcchHHHHHHHHHHc-CCC
Q 018404           90 DSGHP-EFKKGDLVWGT--------TGWEEYSLIKNP----QGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEIC-APK  155 (356)
Q Consensus        90 G~~v~-~~~~Gd~V~~~--------g~~~~~~~v~~~----~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~-~~~  155 (356)
                      |++++ .|++||+|+++        |+|++|++++..    . ++++ |++++.. +++.++..+.|||+++.+.. .++
T Consensus        74 G~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~-~~~l-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~  150 (352)
T cd08247          74 GSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKS-ITRK-PENISLE-EAAAWPLVLGTAYQILEDLGQKLG  150 (352)
T ss_pred             CcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccce-eEEC-CCCCCHH-HHHHhHHHHHHHHHHHHHhhhccC
Confidence            99998 89999999975        789999999987    5 8999 9986555 67788999999999998777 799


Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc-CC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCccc---HHHHH-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLM-GC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEND---LDAAL-  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~-g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~-  229 (356)
                      +|++|+|+|++|++|++++++|+.+ +. +++++. +.++.          +.++ ++|++.++++.+. +   +...+ 
T Consensus       151 ~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~----------~~~~-~~g~~~~i~~~~~-~~~~~~~~~~  217 (352)
T cd08247         151 PDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSA----------ELNK-KLGADHFIDYDAH-SGVKLLKPVL  217 (352)
T ss_pred             CCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHH----------HHHH-HhCCCEEEecCCC-cccchHHHHH
Confidence            9999999999999999999999998 55 677776 45555          6666 8999889987765 4   44444 


Q ss_pred             HHhCCC-CccEEEeCCCc-hHHHHHHHhhc---cCCeEEEEccccccCCCCCc-----cccchHHHHhhcceeeceeeec
Q 018404          230 KRCFPE-GIDIYFEHVGG-KMLDAVLLNMR---LHGRIAACGMISQYNLSQPE-----GVHNLMNVVYKRIRMEGFVVFD  299 (356)
Q Consensus       230 ~~~~~~-~~d~vid~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  299 (356)
                      +..+++ ++|++|||+|+ .....++++++   ++|+++.++.....+.....     ........+.++..+..+....
T Consensus       218 ~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (352)
T cd08247         218 ENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQF  297 (352)
T ss_pred             HhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEE
Confidence            444424 99999999999 68889999999   99999987532211000000     0000011122333333322211


Q ss_pred             c-hhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          300 Y-FPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       300 ~-~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      . .....+.++.+++++.++.+++.+.+.++++++++|++.+.+++..||+|+++
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         298 FLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             EEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            1 00113678889999999999887788899999999999999998899999864

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=1.9e-34  Score=270.00  Aligned_cols=316  Identities=22%  Similarity=0.297  Sum_probs=239.6

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCC-CCCeEEEEEEEeecCHHhhhhhccCCC---------------CCCCC
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEE-GSNAILVKNLYLSCDPYMRARMSFNQD---------------PDFSS   73 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~-~~~evlV~v~~~~i~~~d~~~~~~~~~---------------~~~~p   73 (356)
                      |||+++.++  |+|. +.+.+  .+.+.| .| ++++|+||+.++++|++|+.....+..               ....|
T Consensus         1 ~~a~~~~~~--~~~~-~~~~~--~~~~~p-~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p   74 (350)
T cd08248           1 MKAWQIHSY--GGID-SLLLL--ENARIP-VIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFP   74 (350)
T ss_pred             CceEEeccc--CCCc-ceeee--cccCCC-CCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCC
Confidence            689998887  7763 23455  456666 67 599999999999999999987653211               23457


Q ss_pred             CCCCCcceecEEEEEecCCCCCCCCCCEEEEc------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHH
Q 018404           74 FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAG  147 (356)
Q Consensus        74 ~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~  147 (356)
                      .++|||+  +|+|+.+|+++.++++||+|+++      |+|++|+.++.+. ++++ |++++.. +++.+++.+.|||++
T Consensus        75 ~~~G~e~--~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~aa~~~~~~~ta~~~  149 (350)
T cd08248          75 LTLGRDC--SGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENE-VSKK-PKNLSHE-EAASLPYAGLTAWSA  149 (350)
T ss_pred             eeeccee--EEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHH-eecC-CCCCCHH-HHhhchhHHHHHHHH
Confidence            8999985  89999999999999999999984      8999999999998 9999 9985554 577889999999999


Q ss_pred             HHHHcCCCC----CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcc
Q 018404          148 FYEICAPKK----GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEN  223 (356)
Q Consensus       148 l~~~~~~~~----g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~  223 (356)
                      +.+.+.+.+    |++|+|+|++|++|++++++|+.+|++|+++.++ ++.          +.++ ++|.+.+++..+. 
T Consensus       150 l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~----------~~~~-~~g~~~~~~~~~~-  216 (350)
T cd08248         150 LVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAI----------PLVK-SLGADDVIDYNNE-  216 (350)
T ss_pred             HHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chH----------HHHH-HhCCceEEECCCh-
Confidence            987777754    9999999999999999999999999999988865 555          7777 8999888887664 


Q ss_pred             cHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCcc--ccchHHHHhhcceeecee---e-
Q 018404          224 DLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEG--VHNLMNVVYKRIRMEGFV---V-  297 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~-  297 (356)
                      ++.+.+...  +++|++|||+|+.....++++++++|+++.+|............  .............+..+.   . 
T Consensus       217 ~~~~~l~~~--~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (350)
T cd08248         217 DFEEELTER--GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHY  294 (350)
T ss_pred             hHHHHHHhc--CCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCe
Confidence            555555432  37999999999998999999999999999998643211000000  000000111111111110   0 


Q ss_pred             -ecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          298 -FDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       298 -~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                       ........+.+.++++++++|.+.+.+.+.|+++++.+|++.+.+++..+|+++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  349 (350)
T cd08248         295 RWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVI  349 (350)
T ss_pred             eEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence             000112367789999999999998878889999999999999998888888886

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.4e-34  Score=263.85  Aligned_cols=294  Identities=24%  Similarity=0.317  Sum_probs=234.5

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      ||++++..+  | +.  .+.+  .+.+.| +++++||+||+.++++|++|+....... ...+|.++|||+  +|+|+++
T Consensus         1 ~~~~~~~~~--~-~~--~~~~--~~~~~~-~~~~~ev~v~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~--~G~v~~v   69 (325)
T cd08264           1 MKALVFEKS--G-IE--NLKV--EDVKDP-KPGPGEVLIRVKMAGVNPVDYNVINAVK-VKPMPHIPGAEF--AGVVEEV   69 (325)
T ss_pred             CeeEEeccC--C-CC--ceEE--EeccCC-CCCCCeEEEEEEEEEechHHHHHHhCCC-CCCCCeecccce--eEEEEEE
Confidence            678988765  4 32  3455  455666 7899999999999999999988765211 123477899985  8999999


Q ss_pred             cCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhcccCc
Q 018404           90 DSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGM  139 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~  139 (356)
                      |++++++++||+|+++                              |+|++|++++.+. ++++ |+++++. +++.+++
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~~~~~~~  146 (325)
T cd08264          70 GDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKN-LFKI-PDSISDE-LAASLPV  146 (325)
T ss_pred             CCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHH-ceeC-CCCCCHH-Hhhhhhh
Confidence            9999999999999863                              7899999999998 9999 9996555 5778899


Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      .+.+||+++.. .++++|++|+|+|++|++|++++++|+.+|++|+++++    .          +.++ ++|+++++++
T Consensus       147 ~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~----------~~~~-~~g~~~~~~~  210 (325)
T cd08264         147 AALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----K----------DWLK-EFGADEVVDY  210 (325)
T ss_pred             hhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----H----------HHHH-HhCCCeeecc
Confidence            99999999965 88999999999998999999999999999999998863    3          5566 8998888876


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeec
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFD  299 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (356)
                      .+   ..+.+++.+ +++|++|||+|+..+..++++|+++|+++.+|.....     ....+...+..++.++.+.....
T Consensus       211 ~~---~~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  281 (325)
T cd08264         211 DE---VEEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGG-----EVKLDLSDLYSKQISIIGSTGGT  281 (325)
T ss_pred             hH---HHHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----CCccCHHHHhhcCcEEEEccCCC
Confidence            43   345566666 6799999999998999999999999999999864211     12334555666777777665443


Q ss_pred             chhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceE
Q 018404          300 YFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQ  349 (356)
Q Consensus       300 ~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~  349 (356)
                           ++.++++++++...+  ..+.+.|+++++++|++.+.++...+|+
T Consensus       282 -----~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         282 -----RKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             -----HHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence                 567888888886443  4567789999999999999888777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-33  Score=260.90  Aligned_cols=309  Identities=24%  Similarity=0.361  Sum_probs=251.5

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++..+  |.+.  .+.++  +.+.| ++.+++|+|++.++++|++|+...... ......|.++|||+  +|+|+.
T Consensus         1 ~~a~~~~~~--~~~~--~~~~~--~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~--~G~v~~   71 (326)
T cd08272           1 MKALVLESF--GGPE--VFELR--EVPRP-QPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDV--AGVVEA   71 (326)
T ss_pred             CeEEEEccC--CCch--heEEe--ecCCC-CCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccce--eEEEEE
Confidence            689999887  6663  45554  44555 688999999999999999998876522 11223477899985  899999


Q ss_pred             ecCCCCCCCCCCEEEEc--------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEE
Q 018404           89 VDSGHPEFKKGDLVWGT--------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYI  160 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~V  160 (356)
                      +|+++.++++||+|+++        |+|++|+.++... ++++ |++++.. .++.++..+.+||+++.+..++.+|+++
T Consensus        72 ~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~v  148 (326)
T cd08272          72 VGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARL-LALK-PANLSMR-EAAALPLVGITAWEGLVDRAAVQAGQTV  148 (326)
T ss_pred             eCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHH-cccC-CCCCCHH-HHHHhHHHHHHHHHHHHHhcCCCCCCEE
Confidence            99999999999999985        6899999999888 9999 9985554 5777888999999998888999999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccE
Q 018404          161 YVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDI  239 (356)
Q Consensus       161 lI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~  239 (356)
                      +|+|++|++|++++++++.+|++|++++++ ++.          +.++ ++|.+.+++...  .+.+.+.+.+++ ++|+
T Consensus       149 li~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~----------~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~  214 (326)
T cd08272         149 LIHGGAGGVGHVAVQLAKAAGARVYATASS-EKA----------AFAR-SLGADPIIYYRE--TVVEYVAEHTGGRGFDV  214 (326)
T ss_pred             EEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHH----------HHHH-HcCCCEEEecch--hHHHHHHHhcCCCCCcE
Confidence            999999999999999999999999999988 777          8887 899988887654  366778887776 8999


Q ss_pred             EEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeec-----c-hhhHHHHHHHHHH
Q 018404          240 YFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFD-----Y-FPQYSRFLDAVLP  313 (356)
Q Consensus       240 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~l~~~~~  313 (356)
                      +|||+|+.....++++++++|+++.+|... .        ........+++++.+.....     . +....+.+..+++
T Consensus       215 v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (326)
T cd08272         215 VFDTVGGETLDASFEAVALYGRVVSILGGA-T--------HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAAR  285 (326)
T ss_pred             EEECCChHHHHHHHHHhccCCEEEEEecCC-c--------cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHH
Confidence            999999988889999999999999998642 1        11112235677777665332     1 3334678888999


Q ss_pred             HHHcCCCcccee-eeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          314 YIREGKVVYVED-VADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       314 ~~~~g~l~~~i~-~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++.++.+++.++ +.|++++++++++.+.+++..+|+++++
T Consensus       286 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         286 LVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            999999987765 8899999999999998888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=8.3e-34  Score=264.93  Aligned_cols=302  Identities=22%  Similarity=0.264  Sum_probs=238.9

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC---CCCCCCCCCCCCcceecEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN---QDPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~---~~~~~~p~v~G~e~~~~G~V   86 (356)
                      ||+++++++  |+    .+.+  .+.|.| .+++++++||+.++++|+.|+..+...   .....+|.++|||+  +|+|
T Consensus         1 ~~~~~~~~~--~~----~~~~--~~~~~~-~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~--~G~V   69 (341)
T cd05281           1 MKAIVKTKA--GP----GAEL--VEVPVP-KPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEF--AGEV   69 (341)
T ss_pred             CcceEEecC--CC----ceEE--EeCCCC-CCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccce--EEEE
Confidence            688999875  43    2455  556666 789999999999999999998865421   12233567899985  8999


Q ss_pred             EEecCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhcc
Q 018404           87 KVVDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGI  136 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~  136 (356)
                      +.+|++++.+++||+|+++                              |+|++|++++.+. ++++ |++++  .+.++
T Consensus        70 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~l-P~~~~--~~~a~  145 (341)
T cd05281          70 VEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEEN-LWKN-DKDIP--PEIAS  145 (341)
T ss_pred             EEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHH-cEEC-cCCCC--HHHhh
Confidence            9999999999999999873                              7899999999988 9999 99844  35567


Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD  215 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  215 (356)
                      ++..+.++++++.  ....+|++|+|+| +|++|++++|+|+.+|+ +|+++++++++.          +.++ ++|.++
T Consensus       146 ~~~~~~~a~~~~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~----------~~~~-~~g~~~  211 (341)
T cd05281         146 IQEPLGNAVHTVL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRL----------ELAK-KMGADV  211 (341)
T ss_pred             hhhHHHHHHHHHH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH----------HHHH-HhCcce
Confidence            7888889998874  4567899999987 69999999999999999 799887777776          7777 899988


Q ss_pred             EEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceee
Q 018404          216 AFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRME  293 (356)
Q Consensus       216 vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (356)
                      ++++... ++. .+.+.+++ ++|++|||+|+ .....++++|+++|+++.+|..... ..   . ........+++.+.
T Consensus       212 ~~~~~~~-~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~---~-~~~~~~~~~~~~~~  284 (341)
T cd05281         212 VINPREE-DVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP-VD---I-DLNNLVIFKGLTVQ  284 (341)
T ss_pred             eeCcccc-cHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC-cc---c-ccchhhhccceEEE
Confidence            8887665 677 78887776 99999999987 6788999999999999999864321 10   0 11223555677766


Q ss_pred             ceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          294 GFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       294 ~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ++....    ..+.++++++++.+|.+.  +.+...++++++++|++.+.+++ .||+|++
T Consensus       285 ~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~  340 (341)
T cd05281         285 GITGRK----MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLY  340 (341)
T ss_pred             EEecCC----cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence            654222    235678899999999986  44667889999999999999988 8999975

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.1e-33  Score=264.45  Aligned_cols=302  Identities=18%  Similarity=0.189  Sum_probs=240.3

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccC-CCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVE-EGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~-~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      ||+++++++  +     .+.+  .++|.| . ++++||+||+.++++|++|+....+... ..+|.++|||+  +|+|++
T Consensus         1 m~~~~~~~~--~-----~~~~--~~~~~p-~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~--~G~V~~   67 (345)
T cd08287           1 MRATVIHGP--G-----DIRV--EEVPDP-VIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEF--VGVVEE   67 (345)
T ss_pred             CceeEEecC--C-----ceeE--EeCCCC-CCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccce--EEEEEE
Confidence            688999764  2     2345  556666 5 4899999999999999999877653222 24578999995  899999


Q ss_pred             ecCCCCCCCCCCEEEE-c-----------------------------cccceeEeecCC--CcceeecCCCCCccch---
Q 018404           89 VDSGHPEFKKGDLVWG-T-----------------------------TGWEEYSLIKNP--QGLFKIHHTDVPLSYY---  133 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~-~-----------------------------g~~~~~~~v~~~--~~l~~~~p~~~~~~~~---  133 (356)
                      +|+++.++++||+|++ +                             |+|++|++++.+  . ++++ |++++....   
T Consensus        68 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P~~l~~~~~~~~  145 (345)
T cd08287          68 VGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGT-LVKV-PGSPSDDEDLLP  145 (345)
T ss_pred             eCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCc-eEEC-CCCCChhhhhhh
Confidence            9999999999999986 1                             788999999975  6 9999 999655111   


Q ss_pred             -hcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          134 -TGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       134 -~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                       .+++...+.+||+++. .+.+.+|++|+|.| +|++|++++|+|+.+|++ ++++++++++.          +.++ ++
T Consensus       146 ~~~~l~~~~~~a~~~~~-~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~----------~~~~-~~  212 (345)
T cd08287         146 SLLALSDVMGTGHHAAV-SAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQ----------ALAR-EF  212 (345)
T ss_pred             hhHhhhcHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHH----------HHHH-Hc
Confidence             1234467899999984 67899999999976 899999999999999995 77777777676          7777 89


Q ss_pred             CCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhc
Q 018404          212 GFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR  289 (356)
Q Consensus       212 g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  289 (356)
                      |++.++++.+. .+.+.+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....      ...+....+.++
T Consensus       213 ga~~v~~~~~~-~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~  285 (345)
T cd08287         213 GATDIVAERGE-EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG------VELDVRELFFRN  285 (345)
T ss_pred             CCceEecCCcc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCC------CccCHHHHHhcc
Confidence            99999998876 788888888776 99999999987 7889999999999999999864321      112333567788


Q ss_pred             ceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          290 IRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      +++.+....     ..+.++++++++++|.+++  .+.+.++++++++|++.+.+++.. |++|+
T Consensus       286 ~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  344 (345)
T cd08287         286 VGLAGGPAP-----VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR  344 (345)
T ss_pred             eEEEEecCC-----cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence            888764322     2568899999999999986  367789999999999998876654 88885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.8e-34  Score=263.43  Aligned_cols=312  Identities=22%  Similarity=0.234  Sum_probs=241.2

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC-CCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ-DPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~-~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      +||+.+.++  +.|.  .+.+  .+.+.| .+.+++|+|++.++++|+.|+....... ....+|.++|||+  +|+|+.
T Consensus         1 ~~~~~~~~~--~~~~--~~~~--~~~~~~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~--~G~v~~   71 (331)
T cd08273           1 NREVVVTRR--GGPE--VLKV--VEADLP-EPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDL--VGRVDA   71 (331)
T ss_pred             CeeEEEccC--CCcc--cEEE--eccCCC-CCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccce--EEEEEE
Confidence            478999887  6664  4444  455556 7889999999999999999988776322 1224578999985  899999


Q ss_pred             ecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecC
Q 018404           89 VDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAA  165 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga  165 (356)
                      +|+++..+++||+|+++   |+|++|+.++.+. ++++ |++++.. ++++++..+.+||+++...+.+.+|++|+|+|+
T Consensus        72 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~  148 (331)
T cd08273          72 LGSGVTGFEVGDRVAALTRVGGNAEYINLDAKY-LVPV-PEGVDAA-EAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGA  148 (331)
T ss_pred             eCCCCccCCCCCEEEEeCCCcceeeEEEechHH-eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence            99999999999999986   8999999999988 9999 9996555 577899999999999988788999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCC
Q 018404          166 SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG  245 (356)
Q Consensus       166 ~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g  245 (356)
                      +|++|++++++++.+|++|+++++ +++.          +.++ ++|+.. ++.... ++...  ....+++|++|||+|
T Consensus       149 ~g~ig~~~~~~a~~~g~~v~~~~~-~~~~----------~~~~-~~g~~~-~~~~~~-~~~~~--~~~~~~~d~vl~~~~  212 (331)
T cd08273         149 SGGVGQALLELALLAGAEVYGTAS-ERNH----------AALR-ELGATP-IDYRTK-DWLPA--MLTPGGVDVVFDGVG  212 (331)
T ss_pred             CcHHHHHHHHHHHHcCCEEEEEeC-HHHH----------HHHH-HcCCeE-EcCCCc-chhhh--hccCCCceEEEECCc
Confidence            999999999999999999999997 7776          7777 888653 455443 44433  333348999999999


Q ss_pred             chHHHHHHHhhccCCeEEEEccccccCCCCCccccch------------HHHHhhcceeeceeeec--chhhHHHHHHHH
Q 018404          246 GKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNL------------MNVVYKRIRMEGFVVFD--YFPQYSRFLDAV  311 (356)
Q Consensus       246 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~  311 (356)
                      +.....++++++++|+++.+|.....+..  ......            .....+++.+.......  .+....+.++.+
T Consensus       213 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  290 (331)
T cd08273         213 GESYEESYAALAPGGTLVCYGGNSSLLQG--RRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTEL  290 (331)
T ss_pred             hHHHHHHHHHhcCCCEEEEEccCCCCCCc--cccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHH
Confidence            97799999999999999999875432110  000000            01112222222222111  123456789999


Q ss_pred             HHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          312 LPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       312 ~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      ++++.+|.+++.+.+.+++++++++++.+.++...||+|+
T Consensus       291 ~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         291 LDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            9999999999877888999999999999998888889886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.6e-33  Score=262.12  Aligned_cols=299  Identities=24%  Similarity=0.318  Sum_probs=237.8

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +     .+.+  .+.|.| ++++++|+||+.++++|+.|+....+... ..+|.++|+|  ++|+|+.+
T Consensus         1 ~~a~~~~~~--~-----~~~~--~~~~~~-~l~~~~v~v~v~~~~l~~~d~~~~~g~~~-~~~p~~~g~~--~~G~v~~v   67 (334)
T cd08234           1 MKALVYEGP--G-----ELEV--EEVPVP-EPGPDEVLIKVAACGICGTDLHIYEGEFG-AAPPLVPGHE--FAGVVVAV   67 (334)
T ss_pred             CeeEEecCC--C-----ceEE--EeccCC-CCCCCeEEEEEEEEeEchhhhHHhcCCCC-CCCCcccccc--eEEEEEEe
Confidence            689999765  3     2444  456666 78999999999999999999987763222 2367899988  58999999


Q ss_pred             cCCCCCCCCCCEEEE------------------------------ccccceeEeecCCCcceeecCCCCCccchhcccCc
Q 018404           90 DSGHPEFKKGDLVWG------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGM  139 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~  139 (356)
                      |++++++++||+|++                              .|+|++|+.++.+. ++++ |+++++. +++.+ .
T Consensus        68 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~~~~-~aa~~-~  143 (334)
T cd08234          68 GSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQ-VYKI-PDNLSFE-EAALA-E  143 (334)
T ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHH-cEEC-cCCCCHH-HHhhh-h
Confidence            999999999999986                              27899999999998 9999 9986554 44444 7


Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      .+.++++++ ..+++++|++|+|+| +|++|.+++++|+.+|++ |+++++++++.          +.++ ++|.+.+++
T Consensus       144 ~~~~a~~~l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~----------~~~~-~~g~~~~~~  210 (334)
T cd08234         144 PLSCAVHGL-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKL----------ELAK-KLGATETVD  210 (334)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH----------HHHH-HhCCeEEec
Confidence            788999998 678999999999997 699999999999999997 88888888887          8887 899888888


Q ss_pred             cCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceee
Q 018404          219 YKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV  297 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (356)
                      +.+. ++... +...++++|++|||+|+ ..+..++++|+++|+++.+|.....    .........++.+++++.+...
T Consensus       211 ~~~~-~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~  284 (334)
T cd08234         211 PSRE-DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFI  284 (334)
T ss_pred             CCCC-CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEecc
Confidence            7765 55444 33333489999999986 6888999999999999999875431    0112233444557777766543


Q ss_pred             ecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          298 FDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       298 ~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      .      .+.+++++++++++++++  .+..+++++++++|++.+.+ ...||+|+
T Consensus       285 ~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         285 N------PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             C------HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            2      456888999999999874  36678999999999999998 77889886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4e-33  Score=257.84  Aligned_cols=315  Identities=22%  Similarity=0.286  Sum_probs=256.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      ||++++.+.  +.+.  .+.+  .+.+.| .+++++++|++.++++|+.|+...... .....+|.++|||+  +|+|+.
T Consensus         1 ~~~~~~~~~--~~~~--~~~~--~~~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~--~G~v~~   71 (328)
T cd08268           1 MRAVRFHQF--GGPE--VLRI--EELPVP-APGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEA--AGVVEA   71 (328)
T ss_pred             CeEEEEecc--CCcc--eeEE--eecCCC-CCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcce--EEEEEe
Confidence            578888875  5553  3444  455555 788999999999999999998776522 22234578899985  899999


Q ss_pred             ecCCCCCCCCCCEEEEc--------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEE
Q 018404           89 VDSGHPEFKKGDLVWGT--------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYI  160 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~V  160 (356)
                      +|+++.++++||+|+++        |++++|+.++.+. ++++ |++++.. ++++++..+.+||+++.....+.++++|
T Consensus        72 ~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~v  148 (328)
T cd08268          72 VGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAA-VVKL-PDGLSFV-EAAALWMQYLTAYGALVELAGLRPGDSV  148 (328)
T ss_pred             eCCCCCcCCCCCEEEeccccccCCCccceEEEEechHh-cEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCEE
Confidence            99999999999999986        7899999999998 9999 9985444 5778899999999999888889999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccE
Q 018404          161 YVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDI  239 (356)
Q Consensus       161 lI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~  239 (356)
                      +|+|++|++|++++++++..|++++.++++.++.          +.++ ++|.+.+++.... .+.+.+.+.+.+ ++|+
T Consensus       149 li~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~  216 (328)
T cd08268         149 LITAASSSVGLAAIQIANAAGATVIATTRTSEKR----------DALL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDV  216 (328)
T ss_pred             EEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHH----------HHHH-HcCCCEEEecCCc-cHHHHHHHHhCCCCceE
Confidence            9999999999999999999999999999998887          8887 8898888887765 677777777766 8999


Q ss_pred             EEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc---hhhHHHHHHHHHHHHH
Q 018404          240 YFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY---FPQYSRFLDAVLPYIR  316 (356)
Q Consensus       240 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~  316 (356)
                      +|+|.|+.....++++++++|+++.+|.....     ....+....+.+++++.++.....   +......++.+.+++.
T Consensus       217 vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (328)
T cd08268         217 VFDPVGGPQFAKLADALAPGGTLVVYGALSGE-----PTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLA  291 (328)
T ss_pred             EEECCchHhHHHHHHhhccCCEEEEEEeCCCC-----CCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHH
Confidence            99999998889999999999999999864321     111233335778888877654432   3344566777788888


Q ss_pred             cCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          317 EGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       317 ~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++.+.+.....|+++++.++++.+.+++..+|+|+++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         292 SGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             CCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999877778899999999999998888888998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=3.2e-33  Score=258.21  Aligned_cols=315  Identities=24%  Similarity=0.328  Sum_probs=256.2

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc-CCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF-NQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~-~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+.+...  +.+.  .+.+  .+.+.| ++++++++||+.++++|+.|+..... ......+|.++|||+  +|+|+.
T Consensus         1 ~~~~~~~~~--~~~~--~~~~--~~~~~~-~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~--~G~v~~   71 (325)
T TIGR02824         1 MKAIEITEP--GGPE--VLVL--VEVPLP-VPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEV--AGEVVA   71 (325)
T ss_pred             CceEEEccC--CCcc--cceE--EeCCCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCcccee--EEEEEE
Confidence            578888765  5553  3444  344445 68899999999999999999877652 222233468999985  899999


Q ss_pred             ecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecC
Q 018404           89 VDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAA  165 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga  165 (356)
                      +|+++.++++||+|+++   |+|++|+.++... ++++ |++++.. .+++++.++.+||+++.+...+.++++|+|+|+
T Consensus        72 vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~  148 (325)
T TIGR02824        72 VGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQ-VLPV-PEGLSLV-EAAALPETFFTVWSNLFQRGGLKAGETVLIHGG  148 (325)
T ss_pred             eCCCCCCCCCCCEEEEccCCCcceeEEEecHHH-cEeC-CCCCCHH-HHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            99999999999999986   7899999999888 9999 9985544 577899999999999888889999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCC
Q 018404          166 SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHV  244 (356)
Q Consensus       166 ~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~  244 (356)
                      +|++|.+++++++.+|++|+++++++++.          +.++ .+|.+.+++.... ++.+.+....++ ++|++++|+
T Consensus       149 ~~~~g~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~  216 (325)
T TIGR02824       149 ASGIGTTAIQLAKAFGARVFTTAGSDEKC----------AACE-ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIV  216 (325)
T ss_pred             cchHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECC
Confidence            99999999999999999999999988887          7777 8998888877665 677778877766 899999999


Q ss_pred             CchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-----hhhHHHHHHHHHHHHHcCC
Q 018404          245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-----FPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       245 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~g~  319 (356)
                      |+..+..++++++++|+++.+|.......     ..+...++.+++++.++.....     +....+.+.+++++++++.
T Consensus       217 ~~~~~~~~~~~l~~~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (325)
T TIGR02824       217 GGSYLNRNIKALALDGRIVQIGFQGGRKA-----ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGR  291 (325)
T ss_pred             chHHHHHHHHhhccCcEEEEEecCCCCcC-----CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCc
Confidence            99888899999999999999987442211     2334445588999988775442     2223456777889999999


Q ss_pred             CccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          320 VVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       320 l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +.+.++..++++++.++++.+.++...||+++++
T Consensus       292 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       292 VRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             ccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            9877778899999999999999888889998864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.9e-33  Score=258.88  Aligned_cols=294  Identities=17%  Similarity=0.138  Sum_probs=236.5

Q ss_pred             EEEeecccccCCCCCeEEEEEEEeecCHHhhhhh-ccCC--CCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc-
Q 018404           30 VKASSISLKVEEGSNAILVKNLYLSCDPYMRARM-SFNQ--DPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT-  105 (356)
Q Consensus        30 ~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~-~~~~--~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~-  105 (356)
                      ++..+++.| ++.++||+||+.++++|+.|+..+ .+..  ..+..|.++|+|  ++|+|+.+|++++++++||+|+++ 
T Consensus         7 ~~~~~~~~~-~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e--~~G~V~~vG~~v~~~~~Gd~V~~~~   83 (312)
T cd08269           7 FEVEEHPRP-TPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHE--GWGRVVALGPGVRGLAVGDRVAGLS   83 (312)
T ss_pred             eEEEECCCC-CCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCccccee--eEEEEEEECCCCcCCCCCCEEEEec
Confidence            333456666 789999999999999999998876 4221  112247899987  589999999999999999999986 


Q ss_pred             -cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-
Q 018404          106 -TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-  183 (356)
Q Consensus       106 -g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-  183 (356)
                       |+|++|+.++++. ++++ |+++  . .++.+..++.+|++++. ..+++++++|+|+| +|++|.+++|+|+.+|++ 
T Consensus        84 ~g~~~~~~~v~~~~-~~~l-P~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~~  156 (312)
T cd08269          84 GGAFAEYDLADADH-AVPL-PSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGARR  156 (312)
T ss_pred             CCcceeeEEEchhh-eEEC-CCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcE
Confidence             7999999999998 9999 9984  2 23222378889999986 78899999999997 799999999999999998 


Q ss_pred             EEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCe
Q 018404          184 VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGR  261 (356)
Q Consensus       184 Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~  261 (356)
                      |+++++++++.          +.++ ++|++.++++... ++.+.+.+.+++ ++|++|||+|+ ..+..++++|+++|+
T Consensus       157 v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~  224 (312)
T cd08269         157 VIAIDRRPARL----------ALAR-ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGR  224 (312)
T ss_pred             EEEECCCHHHH----------HHHH-HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCE
Confidence            99999888887          7777 8999888887665 788888888876 99999999987 678999999999999


Q ss_pred             EEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHH
Q 018404          262 IAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVG  339 (356)
Q Consensus       262 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~  339 (356)
                      ++.+|.....     ....+......+++.+.++.... +....+.+++++++++++.+.+  .+...|+++++++|++.
T Consensus       225 ~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~  298 (312)
T cd08269         225 LVIFGYHQDG-----PRPVPFQTWNWKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEA  298 (312)
T ss_pred             EEEEccCCCC-----CcccCHHHHhhcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHH
Confidence            9999865321     11223345667777776654332 2233578999999999999986  36678999999999999


Q ss_pred             HHcCCC-cceEEE
Q 018404          340 LFSGRN-VGKQLV  351 (356)
Q Consensus       340 ~~~~~~-~gk~vv  351 (356)
                      +.+++. .+|+++
T Consensus       299 ~~~~~~~~~~~~~  311 (312)
T cd08269         299 ARRRPDGFIKGVI  311 (312)
T ss_pred             HHhCCCCceEEEe
Confidence            988754 578876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=1.3e-33  Score=258.37  Aligned_cols=289  Identities=20%  Similarity=0.246  Sum_probs=237.2

Q ss_pred             CCCCCeEEEEEEEeecCHHhhhhhcc-CCCCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc-----cccceeEe
Q 018404           40 EEGSNAILVKNLYLSCDPYMRARMSF-NQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT-----TGWEEYSL  113 (356)
Q Consensus        40 ~~~~~evlV~v~~~~i~~~d~~~~~~-~~~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~-----g~~~~~~~  113 (356)
                      ++.+++++||+.++++|+.|+..... +.....+|.++|+|+  +|+|+++|+++.++++||+|+++     |+|++|+.
T Consensus         4 ~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~--~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~   81 (303)
T cd08251           4 PPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEA--SGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT   81 (303)
T ss_pred             CCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCcee--eEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence            67899999999999999999987762 222334578999885  89999999999999999999986     79999999


Q ss_pred             ecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          114 IKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       114 v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      ++.+. ++++ |++++.. ++++++..+.+||+++. ...+++|++|+|++++|++|++++|+++.+|++|++++++.++
T Consensus        82 ~~~~~-~~~~-p~~~~~~-~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~  157 (303)
T cd08251          82 VPEDQ-VVRK-PASLSFE-EACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDK  157 (303)
T ss_pred             ccHHH-eEEC-CCCCCHH-HHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence            99988 9999 9995554 58888999999999984 6889999999999999999999999999999999999999888


Q ss_pred             hccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccC
Q 018404          194 VWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYN  272 (356)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  272 (356)
                      .          +.++ ++|++.++++... ++.+.+...+++ ++|+++||+++..+..++++++++|+++.+|..+...
T Consensus       158 ~----------~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~  225 (303)
T cd08251         158 L----------EYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS  225 (303)
T ss_pred             H----------HHHH-HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc
Confidence            7          8887 8999999988775 788888888877 9999999999888899999999999999998643210


Q ss_pred             CCCCccccchHHHHhhcceeeceeeecc----hhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcce
Q 018404          273 LSQPEGVHNLMNVVYKRIRMEGFVVFDY----FPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGK  348 (356)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk  348 (356)
                          ...... ..+.+++.+....+..+    +....+.+.++++++.+|.+++.....|++++++++++.+.+++..||
T Consensus       226 ----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (303)
T cd08251         226 ----APSVDL-SVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGK  300 (303)
T ss_pred             ----cCccCh-hHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcce
Confidence                001111 12333443333322211    333456788899999999998877888999999999999998888888


Q ss_pred             EEE
Q 018404          349 QLV  351 (356)
Q Consensus       349 ~vv  351 (356)
                      +++
T Consensus       301 iv~  303 (303)
T cd08251         301 VVV  303 (303)
T ss_pred             EeC
Confidence            874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.2e-33  Score=259.59  Aligned_cols=297  Identities=21%  Similarity=0.216  Sum_probs=236.7

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      ||++++.+.  +.|.+..+.++  +.+.| .++++||+||+.++++|++|+....+.......|.++|||+  +|+|+.+
T Consensus         1 ~~~~~~~~~--~~~~~~~~~~~--~~~~~-~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~--~G~V~~v   73 (329)
T cd08298           1 MKAMVLEKP--GPIEENPLRLT--EVPVP-EPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEI--VGRVEAV   73 (329)
T ss_pred             CeEEEEecC--CCCCCCCceEE--eccCC-CCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccc--cEEEEEE
Confidence            678999877  65433456665  44445 68899999999999999999987763322344578999984  8999999


Q ss_pred             cCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCCCCccchhcccC
Q 018404           90 DSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILG  138 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~  138 (356)
                      |+++.++++||+|++                               .|+|++|+.++... ++++ |++++.. ++++++
T Consensus        74 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~~~~~~  150 (329)
T cd08298          74 GPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERF-AYPI-PEDYDDE-EAAPLL  150 (329)
T ss_pred             CCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchh-EEEC-CCCCCHH-HhhHhh
Confidence            999999999999975                               37899999999998 9999 9996555 688899


Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       139 ~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      +++.|||+++ ..++++++++|+|+| +|++|++++++++..|++|+++++++++.          +.++ ++|++.+++
T Consensus       151 ~~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~  217 (329)
T cd08298         151 CAGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQ----------ELAR-ELGADWAGD  217 (329)
T ss_pred             hhhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHH----------HHHH-HhCCcEEec
Confidence            9999999999 789999999999997 89999999999999999999999999888          8887 899987776


Q ss_pred             cCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceee
Q 018404          219 YKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV  297 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (356)
                      ...  .        .++++|+++++.+. ..+..++++++++|+++.+|....     .....+... +.++..+.+...
T Consensus       218 ~~~--~--------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~-~~~~~~i~~~~~  281 (329)
T cd08298         218 SDD--L--------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYEL-LWGEKTIRSVAN  281 (329)
T ss_pred             cCc--c--------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchhh-hhCceEEEEecC
Confidence            643  1        12379999998765 788999999999999999885221     111112222 334444444332


Q ss_pred             ecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          298 FDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       298 ~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      ..     .+.++.++++++++.+++. .+.|+++++++|++.+.+++..||+|+
T Consensus       282 ~~-----~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         282 LT-----RQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             CC-----HHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            22     5678889999999999874 578999999999999999999899874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=2e-33  Score=262.63  Aligned_cols=289  Identities=19%  Similarity=0.212  Sum_probs=231.3

Q ss_pred             eEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC---CCCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEE
Q 018404           28 MLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN---QDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWG  104 (356)
Q Consensus        28 l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~---~~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~  104 (356)
                      +.++  ++|.| .+.+++|+||+.++++|+.|++.+...   .....+|.++|+|+  +|+|+++|+++.++++||+|++
T Consensus        10 ~~~~--~~~~~-~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~--~G~V~~vG~~v~~~~~Gd~V~~   84 (343)
T cd05285          10 LRLE--ERPIP-EPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHES--AGTVVAVGSGVTHLKVGDRVAI   84 (343)
T ss_pred             eeEE--ECCCC-CCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcce--eEEEEeeCCCCCCCCCCCEEEE
Confidence            4554  55666 788999999999999999998765311   11123567899885  8999999999999999999985


Q ss_pred             -------------------------------ccccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcC
Q 018404          105 -------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICA  153 (356)
Q Consensus       105 -------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~  153 (356)
                                                     .|+|++|++++++. ++++ |++++.. +++.+ .++.+|++++ ..++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~~~~-~aa~~-~~~~~a~~~~-~~~~  159 (343)
T cd05285          85 EPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADF-CHKL-PDNVSLE-EGALV-EPLSVGVHAC-RRAG  159 (343)
T ss_pred             ccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHH-cEEC-cCCCCHH-Hhhhh-hHHHHHHHHH-HhcC
Confidence                                           37899999999998 9999 9995554 45444 6788999997 6789


Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH---HHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL---DAAL  229 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~---~~~~  229 (356)
                      +++|++|+|+| +|++|++++|+|+.+|++ |+++++++++.          +.++ ++|++.++++++. ++   .+.+
T Consensus       160 ~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~----------~~~~-~~g~~~vi~~~~~-~~~~~~~~~  226 (343)
T cd05285         160 VRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRL----------EFAK-ELGATHTVNVRTE-DTPESAEKI  226 (343)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH----------HHHH-HcCCcEEeccccc-cchhHHHHH
Confidence            99999999987 699999999999999997 88888888887          8887 8999999988765 43   7778


Q ss_pred             HHhCCC-CccEEEeCCCch-HHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHH
Q 018404          230 KRCFPE-GIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRF  307 (356)
Q Consensus       230 ~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (356)
                      .+.+++ ++|++|||+|+. .+..++++++++|+++.+|.....      ...+......+++.+.++...      .+.
T Consensus       227 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~  294 (343)
T cd05285         227 AELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE------VTLPLSAASLREIDIRGVFRY------ANT  294 (343)
T ss_pred             HHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------CccCHHHHhhCCcEEEEeccC------hHH
Confidence            777776 899999999984 889999999999999999864321      112233455566666654322      256


Q ss_pred             HHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCC-CcceEEE
Q 018404          308 LDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGR-NVGKQLV  351 (356)
Q Consensus       308 l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~-~~gk~vv  351 (356)
                      +++++++++++.+.  +.+.+.|+++++.+|++.+.+++ ..+|++|
T Consensus       295 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         295 YPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             HHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            88899999999875  44677899999999999998875 5589987

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.1e-33  Score=265.05  Aligned_cols=294  Identities=18%  Similarity=0.203  Sum_probs=233.0

Q ss_pred             EEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-------CCCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEE
Q 018404           30 VKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-------QDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLV  102 (356)
Q Consensus        30 ~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-------~~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V  102 (356)
                      ++..++|.| ++++++|+||+.++++|++|++.....       .....+|.++|||+  +|+|+++|+++..+++||+|
T Consensus        39 ~~~~~~~~p-~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~--~G~V~~vG~~v~~~~~Gd~V  115 (384)
T cd08265          39 LRVEDVPVP-NLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEF--SGVVEKTGKNVKNFEKGDPV  115 (384)
T ss_pred             EEEEECCCC-CCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccce--EEEEEEECCCCCCCCCCCEE
Confidence            334566777 789999999999999999998876411       11234578999985  89999999999999999999


Q ss_pred             EE------------------------------ccccceeEeecCCCcceeecCCCCC-----ccchhcccCcchHHHHHH
Q 018404          103 WG------------------------------TTGWEEYSLIKNPQGLFKIHHTDVP-----LSYYTGILGMPGMTAWAG  147 (356)
Q Consensus       103 ~~------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~-----~~~~~a~l~~~~~tA~~~  147 (356)
                      ++                              .|+|++|+.++... ++++ |++++     +..+.++++.++++||++
T Consensus       116 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~-~~~l-P~~~~~~~~~~~~~~a~~~~~~~ta~~a  193 (384)
T cd08265         116 TAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARY-AWEI-NELREIYSEDKAFEAGALVEPTSVAYNG  193 (384)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHH-eEEC-CccccccccCCCHHHhhhhhHHHHHHHH
Confidence            85                              37899999999988 9999 87531     333466788899999999


Q ss_pred             HHHH-cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc--c
Q 018404          148 FYEI-CAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE--N  223 (356)
Q Consensus       148 l~~~-~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~  223 (356)
                      +... +++++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++.          +.++ ++|+++++++.+.  .
T Consensus       194 l~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~----------~~~~-~~g~~~~v~~~~~~~~  261 (384)
T cd08265         194 LFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERR----------NLAK-EMGADYVFNPTKMRDC  261 (384)
T ss_pred             HHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHH----------HHHH-HcCCCEEEcccccccc
Confidence            8665 6899999999996 79999999999999999 799999888876          7777 8999888887631  1


Q ss_pred             cHHHHHHHhCCC-CccEEEeCCCc--hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc
Q 018404          224 DLDAALKRCFPE-GIDIYFEHVGG--KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY  300 (356)
Q Consensus       224 ~~~~~~~~~~~~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (356)
                      ++.+.+++.+++ ++|+|+||.|+  ..+..++++|+++|+++.+|.....      .......+..++.++.+..... 
T Consensus       262 ~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~~-  334 (384)
T cd08265         262 LSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATT------VPLHLEVLQVRRAQIVGAQGHS-  334 (384)
T ss_pred             cHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCC------CcccHHHHhhCceEEEEeeccC-
Confidence            577788888877 99999999996  3778999999999999999864321      1122344555566665553321 


Q ss_pred             hhhHHHHHHHHHHHHHcCCCccc--eeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          301 FPQYSRFLDAVLPYIREGKVVYV--EDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       301 ~~~~~~~l~~~~~~~~~g~l~~~--i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                         ....++++++++++|.+++.  +.+.|+++++++|++.+.++ ..||+|+
T Consensus       335 ---~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         335 ---GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             ---CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence               13468889999999999863  67789999999999997554 5788886

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=2.2e-33  Score=262.05  Aligned_cols=292  Identities=21%  Similarity=0.261  Sum_probs=233.0

Q ss_pred             eEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC---CCCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEE
Q 018404           28 MLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN---QDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWG  104 (356)
Q Consensus        28 l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~---~~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~  104 (356)
                      +++  .+.|.| .++++||+||+.++++|+.|+..+...   .....+|.++|+|+  +|+|+++|++++++++||+|++
T Consensus        11 ~~l--~~~~~p-~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~--~G~V~~vG~~v~~~~~Gd~V~~   85 (340)
T TIGR00692        11 AEL--TEVPVP-EPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEV--AGEVVGIGPGVEGIKVGDYVSV   85 (340)
T ss_pred             cEE--EECCCC-CCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccce--EEEEEEECCCCCcCCCCCEEEE
Confidence            455  456667 789999999999999999998875421   12233567899885  8999999999999999999986


Q ss_pred             ---------------------------c---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCC
Q 018404          105 ---------------------------T---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAP  154 (356)
Q Consensus       105 ---------------------------~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~  154 (356)
                                                 +   |+|++|++++++. ++++ |++++.  ..++++..+.+|++++  ....
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~--~~a~~~~~~~~a~~~~--~~~~  159 (340)
T TIGR00692        86 ETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQN-IWKN-PKSIPP--EYATIQEPLGNAVHTV--LAGP  159 (340)
T ss_pred             CCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHH-cEEC-cCCCCh--HhhhhcchHHHHHHHH--HccC
Confidence                                       2   7899999999998 9999 998544  4556788899999887  3457


Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      .+|++|+|.| +|++|.+++|+|+.+|++ |+++.+++++.          +.++ ++|++.++++... ++.+.+.+.+
T Consensus       160 ~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~----------~~~~-~~g~~~~v~~~~~-~~~~~l~~~~  226 (340)
T TIGR00692       160 ISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRL----------ELAK-KMGATYVVNPFKE-DVVKEVADLT  226 (340)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH----------HHHH-HhCCcEEEccccc-CHHHHHHHhc
Confidence            8999999976 799999999999999996 88887777776          7777 8999888888765 7888888887


Q ss_pred             CC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHH
Q 018404          234 PE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAV  311 (356)
Q Consensus       234 ~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  311 (356)
                      ++ ++|++|||+|+ ..+..++++|+++|+++.+|..... ..   . .....++.+++++.++...    ...+.+.++
T Consensus       227 ~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~---~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  297 (340)
T TIGR00692       227 DGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-VT---I-DFTNKVIFKGLTIYGITGR----HMFETWYTV  297 (340)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-cc---c-chhhhhhhcceEEEEEecC----CchhhHHHH
Confidence            66 89999999887 6889999999999999999874321 11   1 1222455667776654421    224567889


Q ss_pred             HHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          312 LPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       312 ~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++++.+|.++  +.+...+++++++++++.+.+++. ||+|+++
T Consensus       298 ~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       298 SRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             HHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            9999999987  456788999999999999988874 9999874

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.5e-33  Score=257.59  Aligned_cols=310  Identities=20%  Similarity=0.279  Sum_probs=246.7

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +.  ..++.+  .++|.| ++.+++|+||+.++++|++|+...........+|.++|||+  +|+|+.+
T Consensus         1 ~~a~~~~~~--~~--~~~~~~--~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~--~G~v~~~   71 (325)
T cd08271           1 MKAWVLPKP--GA--ALQLTL--EEIEIP-GPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDG--AGVVVAV   71 (325)
T ss_pred             CeeEEEccC--CC--cceeEE--eccCCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccce--EEEEEEe
Confidence            689999886  42  123445  566666 78999999999999999999887653222223477899985  8999999


Q ss_pred             cCCCCCCCCCCEEEEc------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEe
Q 018404           90 DSGHPEFKKGDLVWGT------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVS  163 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~  163 (356)
                      |+++.++++||+|+++      |+|++|+.++... ++++ |++++.. +++.+++.+.+|++++...+.+.+|++|+|+
T Consensus        72 G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~-~~~i-p~~~~~~-~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~  148 (325)
T cd08271          72 GAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARA-VLPL-PDSLSFE-EAAALPCAGLTAYQALFKKLRIEAGRTILIT  148 (325)
T ss_pred             CCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHH-eEEC-CCCCCHH-HHHhhhhhHHHHHHHHHHhcCCCCCCEEEEE
Confidence            9999999999999986      6899999999988 9999 9985554 5778899999999999888899999999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEe
Q 018404          164 AASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFE  242 (356)
Q Consensus       164 ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid  242 (356)
                      |++|++|++++++++..|++|+++. ++++.          +.+. ++|++.+++.... ++...+++.+++ ++|.+++
T Consensus       149 g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~  215 (325)
T cd08271         149 GGAGGVGSFAVQLAKRAGLRVITTC-SKRNF----------EYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLD  215 (325)
T ss_pred             CCccHHHHHHHHHHHHcCCEEEEEE-cHHHH----------HHHH-HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEE
Confidence            9989999999999999999999887 66666          7777 8999888887665 677778887766 8999999


Q ss_pred             CCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc----h----hhHHHHHHHHHHH
Q 018404          243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY----F----PQYSRFLDAVLPY  314 (356)
Q Consensus       243 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~l~~~~~~  314 (356)
                      |+|+.....++++++++|+++.++.....       . . ...+.+++.+....+...    +    ....+.+.+++++
T Consensus       216 ~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
T cd08271         216 TVGGETAAALAPTLAFNGHLVCIQGRPDA-------S-P-DPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLEL  286 (325)
T ss_pred             CCCcHhHHHHHHhhccCCEEEEEcCCCCC-------c-c-hhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHH
Confidence            99997778899999999999998754321       0 1 112233333333222111    1    2345677889999


Q ss_pred             HHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          315 IREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       315 ~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++++.+.+.....|+++++.+|++.+.++...+|+++++
T Consensus       287 ~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         287 LAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            999999877677899999999999999888889998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.2e-32  Score=259.35  Aligned_cols=287  Identities=17%  Similarity=0.172  Sum_probs=225.2

Q ss_pred             eecccccCCCCCeEEEEEEEeecCHHhhhhhccCC---CCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEE-----
Q 018404           33 SSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ---DPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWG-----  104 (356)
Q Consensus        33 ~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~---~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~-----  104 (356)
                      .+++.| .++++||+||+.++++|++|++......   ....+|.++|||+  +|+|+++|+++.+|++||+|++     
T Consensus        32 ~~~~~p-~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~  108 (364)
T PLN02702         32 QPFKLP-PLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHEC--AGIIEEVGSEVKHLVVGDRVALEPGIS  108 (364)
T ss_pred             EeccCC-CCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccce--eEEEEEECCCCCCCCCCCEEEEcCCCC
Confidence            456666 7899999999999999999998765211   1223578999995  8999999999999999999986     


Q ss_pred             --------------------------ccccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCC
Q 018404          105 --------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGE  158 (356)
Q Consensus       105 --------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~  158 (356)
                                                .|+|++|++++.+. ++++ |++++.. ++ ++..++.++++++ ...++.+++
T Consensus       109 ~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~-~~~~-P~~l~~~-~a-a~~~~~~~a~~~~-~~~~~~~g~  183 (364)
T PLN02702        109 CWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADL-CFKL-PENVSLE-EG-AMCEPLSVGVHAC-RRANIGPET  183 (364)
T ss_pred             CCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHH-eEEC-CCCCCHH-HH-hhhhHHHHHHHHH-HhcCCCCCC
Confidence                                      37899999999988 9999 9985443 33 3334555688887 668899999


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecC--CcccHHHHHHHh---
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYK--EENDLDAALKRC---  232 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~--~~~~~~~~~~~~---  232 (356)
                      +|+|+| +|++|++++|+|+.+|++ |+++++++++.          +.++ ++|++.++++.  +. ++.+.+.+.   
T Consensus       184 ~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~  250 (364)
T PLN02702        184 NVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERL----------SVAK-QLGADEIVLVSTNIE-DVESEVEEIQKA  250 (364)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHH----------HHHH-HhCCCEEEecCcccc-cHHHHHHHHhhh
Confidence            999997 799999999999999995 67777777776          7777 89998877653  23 566666554   


Q ss_pred             CCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHH
Q 018404          233 FPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAV  311 (356)
Q Consensus       233 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  311 (356)
                      +++++|++|||+|+ ..+..++++|+++|+++.+|.....      ..........+++++.+++..      ...++.+
T Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~------~~~~~~~  318 (364)
T PLN02702        251 MGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNE------MTVPLTPAAAREVDVVGVFRY------RNTWPLC  318 (364)
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC------CcccHHHHHhCccEEEEeccC------hHHHHHH
Confidence            23489999999995 7899999999999999999964321      122444567788888776542      2467889


Q ss_pred             HHHHHcCCCc--cceeeeeCC--CcHHHHHHHHHcCCCcceEEEE
Q 018404          312 LPYIREGKVV--YVEDVADGL--ENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       312 ~~~~~~g~l~--~~i~~~~~l--~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      +++++++.+.  +.+.+.|++  +++++|++.+.+++..+|+|+.
T Consensus       319 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        319 LEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            9999999885  446777555  7999999999988888899985

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=1.1e-32  Score=256.14  Aligned_cols=298  Identities=23%  Similarity=0.276  Sum_probs=239.8

Q ss_pred             cEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEec
Q 018404           11 KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVD   90 (356)
Q Consensus        11 ~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~vG   90 (356)
                      ||++++++  |..    +.++  +.|.| .+.+++++|++.++++|++|+....+......+|.++|||+  +|+|+.+|
T Consensus         1 ~~~~~~~~--~~~----~~~~--~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~--~G~v~~~g   69 (330)
T cd08245           1 KAAVVHAA--GGP----LEPE--EVPVP-EPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEI--VGEVVEVG   69 (330)
T ss_pred             CeEEEecC--CCC----ceEE--eccCC-CCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccc--eEEEEEEC
Confidence            67888775  432    4554  55666 68899999999999999999887763333344578999985  89999999


Q ss_pred             CCCCCCCCCCEEE----------------------------E---ccccceeEeecCCCcceeecCCCCCccchhcccCc
Q 018404           91 SGHPEFKKGDLVW----------------------------G---TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGM  139 (356)
Q Consensus        91 ~~v~~~~~Gd~V~----------------------------~---~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~  139 (356)
                      ++++++++||+|+                            +   .|+|++|+.++.+. ++++ |++++.. +++.++.
T Consensus        70 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~~~~l~~  146 (330)
T cd08245          70 AGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEY-TVLL-PDGLPLA-QAAPLLC  146 (330)
T ss_pred             CCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHH-eEEC-CCCCCHH-Hhhhhhh
Confidence            9999999999997                            3   37899999999988 9999 9986555 5777899


Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      .+.|||+++.. ..+.++++|+|+| +|++|++++++|+.+|++|+++++++++.          +.++ ++|.+.++++
T Consensus       147 ~~~ta~~~l~~-~~~~~~~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~  213 (330)
T cd08245         147 AGITVYSALRD-AGPRPGERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKR----------ELAR-KLGADEVVDS  213 (330)
T ss_pred             hHHHHHHHHHh-hCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HhCCcEEecc
Confidence            99999999965 7899999999997 68899999999999999999999999988          8887 8998888876


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeee
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVF  298 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (356)
                      ... .....    ..+++|++|||+++ .....++++|+++|+++.+|.....     ........++.++.++.++...
T Consensus       214 ~~~-~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  283 (330)
T cd08245         214 GAE-LDEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMKRQSIAGSTHG  283 (330)
T ss_pred             CCc-chHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhCCCEEEEeccC
Confidence            553 33222    22479999999886 7889999999999999999864321     1111234466677777666554


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          299 DYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       299 ~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      .     ...++++++++.++.+.+ ....++++++++|++.+.+++..||+|+
T Consensus       284 ~-----~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         284 G-----RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             C-----HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            3     567888999999999986 4467899999999999999998899875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=8e-33  Score=258.06  Aligned_cols=288  Identities=19%  Similarity=0.209  Sum_probs=227.4

Q ss_pred             ceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCC--CCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEE
Q 018404           27 DMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQ--DPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVW  103 (356)
Q Consensus        27 ~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~--~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~  103 (356)
                      ++.++  +.|.| .+++++|+||+.++++|++|+...+ ...  ....+|.++|||+  +|+|+++|++++++++||+|+
T Consensus         8 ~~~~~--~~~~p-~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~--~G~v~~vG~~v~~~~~Gd~V~   82 (339)
T cd08232           8 DLRVE--ERPAP-EPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEV--SGVVEAVGPGVTGLAPGQRVA   82 (339)
T ss_pred             ceEEE--EcCCC-CCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccc--eEEEEeeCCCCCcCCCCCEEE
Confidence            34555  45556 7899999999999999999987653 111  1123577999885  899999999999999999998


Q ss_pred             E-----------------------------------ccccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHH
Q 018404          104 G-----------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGF  148 (356)
Q Consensus       104 ~-----------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l  148 (356)
                      +                                   .|+|++|++++.+. ++++ |++++.. ++ +++.++.+||+++
T Consensus        83 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~i-P~~~~~~-~a-a~~~~~~~a~~~l  158 (339)
T cd08232          83 VNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQ-CVPL-PDGLSLR-RA-ALAEPLAVALHAV  158 (339)
T ss_pred             EccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHH-eEEC-cCCCCHH-Hh-hhcchHHHHHHHH
Confidence            6                                   27899999999998 9999 9995443 34 4468889999999


Q ss_pred             HHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH
Q 018404          149 YEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       149 ~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  227 (356)
                      .....+ ++++|||.| +|++|.+++|+|+.+|+ +|+++++++++.          +.++ ++|.++++++++. ++  
T Consensus       159 ~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~----------~~~~-~~g~~~vi~~~~~-~~--  222 (339)
T cd08232         159 NRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPL----------AVAR-AMGADETVNLARD-PL--  222 (339)
T ss_pred             HhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH----------HHHH-HcCCCEEEcCCch-hh--
Confidence            776666 899999977 79999999999999999 899998888887          7777 8999889988664 32  


Q ss_pred             HHHHhC-CC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhH
Q 018404          228 ALKRCF-PE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY  304 (356)
Q Consensus       228 ~~~~~~-~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (356)
                        .+.. .+ ++|++|||.|+ ..+..++++|+++|+++.+|.....      ...+...++.+++++.++...      
T Consensus       223 --~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~------  288 (339)
T cd08232         223 --AAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGP------VPLPLNALVAKELDLRGSFRF------  288 (339)
T ss_pred             --hhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC------ccCcHHHHhhcceEEEEEecC------
Confidence              2222 22 69999999996 6889999999999999999864311      112333445677777665422      


Q ss_pred             HHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          305 SRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       305 ~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      .+.++++++++++|.+++  .+.+.|+++++++|++.+.+++..||+|+++
T Consensus       289 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         289 DDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            456888999999998863  3678899999999999999888889999864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=4.2e-32  Score=250.30  Aligned_cols=313  Identities=25%  Similarity=0.335  Sum_probs=253.3

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCC-CCeEEEEEEEeecCHHhhhhhccCC-CCCCCCCCCCCcceecEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEG-SNAILVKNLYLSCDPYMRARMSFNQ-DPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~-~~evlV~v~~~~i~~~d~~~~~~~~-~~~~~p~v~G~e~~~~G~V~   87 (356)
                      |+|+++..+  +.+.  .+.+  .+.+ | .+. +++++|++.++++|+.|+....... ....+|.++|||+  +|+|+
T Consensus         1 ~~~~~~~~~--~~~~--~~~~--~~~~-~-~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~--~G~v~   70 (323)
T cd08241           1 MKAVVCKEL--GGPE--DLVL--EEVP-P-EPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEV--AGVVE   70 (323)
T ss_pred             CeEEEEecC--CCcc--eeEE--ecCC-C-CCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCccccee--EEEEE
Confidence            578898865  5553  3444  3444 5 444 5999999999999999998765222 2234467899985  89999


Q ss_pred             EecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEec
Q 018404           88 VVDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSA  164 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~g  164 (356)
                      .+|+++.++++||+|+++   |++++|+.++.+. ++++ |++++.. ++++++..+.+|++++.....+.++++|+|+|
T Consensus        71 ~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g  147 (323)
T cd08241          71 AVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAA-VFPL-PDGLSFE-EAAALPVTYGTAYHALVRRARLQPGETVLVLG  147 (323)
T ss_pred             EeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHH-ceeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence            999999999999999985   6899999999988 9999 8885554 56778899999999997778899999999999


Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeC
Q 018404          165 ASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEH  243 (356)
Q Consensus       165 a~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~  243 (356)
                      ++|++|++++++++..|++|++++++.++.          +.++ ++|.+.+++.... ++.+.+.+.+++ ++|.+++|
T Consensus       148 ~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~  215 (323)
T cd08241         148 AAGGVGLAAVQLAKALGARVIAAASSEEKL----------ALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDP  215 (323)
T ss_pred             CCchHHHHHHHHHHHhCCEEEEEeCCHHHH----------HHHH-HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEEC
Confidence            889999999999999999999999998887          8888 8898888887765 778888888776 89999999


Q ss_pred             CCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc----hhhHHHHHHHHHHHHHcCC
Q 018404          244 VGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY----FPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       244 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~g~  319 (356)
                      +|+.....++++++++|+++.+|.....     .........+.+++++.++....+    +....+.+.++++++.++.
T Consensus       216 ~g~~~~~~~~~~~~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (323)
T cd08241         216 VGGDVFEASLRSLAWGGRLLVIGFASGE-----IPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGK  290 (323)
T ss_pred             ccHHHHHHHHHhhccCCEEEEEccCCCC-----cCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCC
Confidence            9998889999999999999999874321     011123345667888887665443    2234567888999999999


Q ss_pred             CccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          320 VVYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       320 l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      +.+.++..|+++++.++++.+.++...+|++++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         291 IRPHVSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             cccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            987778889999999999999888888888863

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-32  Score=252.77  Aligned_cols=271  Identities=23%  Similarity=0.295  Sum_probs=220.3

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      ||++++++.  + +  ..+.+  .+++.| .+.+++|+||+.++++|++|+............|.++|+|+  +|+|+.+
T Consensus         1 ~~~~~~~~~--~-~--~~~~~--~~~~~p-~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~--~G~V~~v   70 (306)
T cd08258           1 MKALVKTGP--G-P--GNVEL--REVPEP-EPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEF--SGTIVEV   70 (306)
T ss_pred             CeeEEEecC--C-C--CceEE--eecCCC-CCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccce--EEEEEEE
Confidence            578888763  2 2  23555  456666 78999999999999999999887663333334578899885  8999999


Q ss_pred             cCCCCCCCCCCEEEEc-------------------------------cccceeEeecCCCcceeecCCCCCccchhcccC
Q 018404           90 DSGHPEFKKGDLVWGT-------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILG  138 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~  138 (356)
                      |++++.+++||+|++.                               |+|++|++++... ++++ |++++.. ++ +++
T Consensus        71 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~a-a~~  146 (306)
T cd08258          71 GPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEES-LHEL-PENLSLE-AA-ALT  146 (306)
T ss_pred             CCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHH-eEEC-cCCCCHH-HH-Hhh
Confidence            9999999999999874                               7899999999998 9999 9995544 34 488


Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC--CcchhccccchhHHHHHHHhhcCCCEE
Q 018404          139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG--SREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       139 ~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      ..+.+||+++...+.++++++|+|.| +|++|.+++|+|+.+|++|+.++.  +.++.          +.++ ++|++++
T Consensus       147 ~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~----------~~~~-~~g~~~~  214 (306)
T cd08258         147 EPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRL----------DVAK-ELGADAV  214 (306)
T ss_pred             chHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHH----------HHHH-HhCCccc
Confidence            88999999998888999999999976 799999999999999999988743  33355          6667 8999877


Q ss_pred             EecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeec
Q 018404          217 FNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEG  294 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (356)
                       ++... ++.+.+.+.+++ ++|++|||+|+ ..+..++++|+++|+++.+|..++.     ....+...++++++++.|
T Consensus       215 -~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~i~g  287 (306)
T cd08258         215 -NGGEE-DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPL-----AASIDVERIIQKELSVIG  287 (306)
T ss_pred             -CCCcC-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-----CcccCHHHHhhcCcEEEE
Confidence             77765 788888887766 89999999986 7888999999999999999986521     123355667789999999


Q ss_pred             eeeecchhhHHHHHHHHHHHHHcC
Q 018404          295 FVVFDYFPQYSRFLDAVLPYIREG  318 (356)
Q Consensus       295 ~~~~~~~~~~~~~l~~~~~~~~~g  318 (356)
                      +++..     .++++++++++++|
T Consensus       288 ~~~~~-----~~~~~~~~~~~~~~  306 (306)
T cd08258         288 SRSST-----PASWETALRLLASG  306 (306)
T ss_pred             EecCc-----hHhHHHHHHHHhcC
Confidence            98876     67799999998875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=3.6e-32  Score=249.35  Aligned_cols=299  Identities=25%  Similarity=0.386  Sum_probs=241.1

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC---CCCCCCCCCCCcceecEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ---DPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~---~~~~~p~v~G~e~~~~G~V   86 (356)
                      |||+++..+  |.+.    .++..+.+.| ++++++|+||+.++++|+.|+....+..   ....+|.++|||+  +|+|
T Consensus         1 ~~~~~~~~~--~~~~----~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~--~G~v   71 (309)
T cd05289           1 MKAVRIHEY--GGPE----VLELADVPTP-EPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDV--AGVV   71 (309)
T ss_pred             CceEEEccc--CCcc----ceeecccCCC-CCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccce--eEEE
Confidence            678898876  6553    2333455556 7899999999999999999988765221   1234478999985  8999


Q ss_pred             EEecCCCCCCCCCCEEEEc------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEE
Q 018404           87 KVVDSGHPEFKKGDLVWGT------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYI  160 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~V  160 (356)
                      +.+|+++.++++||+|+++      |+|++|+.++... ++++ |+++++. .++.+++.+.+|++++.....+.++++|
T Consensus        72 ~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~v  148 (309)
T cd05289          72 VAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADE-LALK-PANLSFE-EAAALPLAGLTAWQALFELGGLKAGQTV  148 (309)
T ss_pred             EeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHH-hccC-CCCCCHH-HHHhhhHHHHHHHHHHHhhcCCCCCCEE
Confidence            9999999999999999985      6899999999988 9999 8986554 5777888999999999887779999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccE
Q 018404          161 YVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDI  239 (356)
Q Consensus       161 lI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~  239 (356)
                      +|+|++|++|++++++++..|++|++++++. +.          +.++ ++|.+.+++.... ++.+    .+.+ ++|+
T Consensus       149 lv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~----------~~~~-~~g~~~~~~~~~~-~~~~----~~~~~~~d~  211 (309)
T cd05289         149 LIHGAAGGVGSFAVQLAKARGARVIATASAA-NA----------DFLR-SLGADEVIDYTKG-DFER----AAAPGGVDA  211 (309)
T ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEecch-hH----------HHHH-HcCCCEEEeCCCC-chhh----ccCCCCceE
Confidence            9999899999999999999999999998877 66          7777 8998888877664 4433    3333 8999


Q ss_pred             EEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          240 YFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       240 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      +|+|+|+.....++++++++|+++.+|.....        ..  ..+.+++++.......   . .+.+.+++++++++.
T Consensus       212 v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~--------~~--~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~  277 (309)
T cd05289         212 VLDTVGGETLARSLALVKPGGRLVSIAGPPPA--------EQ--AAKRRGVRAGFVFVEP---D-GEQLAELAELVEAGK  277 (309)
T ss_pred             EEECCchHHHHHHHHHHhcCcEEEEEcCCCcc--------hh--hhhhccceEEEEEecc---c-HHHHHHHHHHHHCCC
Confidence            99999999899999999999999999863221        01  3344566665554422   1 567889999999999


Q ss_pred             CccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          320 VVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       320 l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      +.+.+++.|+++++++|++.+.+++..+|+|+
T Consensus       278 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         278 LRPVVDRVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             EEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence            98778888999999999999998887888774

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.3e-32  Score=252.86  Aligned_cols=283  Identities=20%  Similarity=0.177  Sum_probs=223.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +     .+.+  .++|.| ++++++|+||+.++++|++|+....+..   ..|.++|||+  +|+|+++
T Consensus         1 ~~a~~~~~~--~-----~~~~--~~~~~p-~~~~~~vlV~v~a~~i~~~d~~~~~g~~---~~~~~~G~e~--~G~Vv~~   65 (319)
T cd08242           1 MKALVLDGG--L-----DLRV--EDLPKP-EPPPGEALVRVLLAGICNTDLEIYKGYY---PFPGVPGHEF--VGIVEEG   65 (319)
T ss_pred             CeeEEEeCC--C-----cEEE--EECCCC-CCCCCeEEEEEEEEEEccccHHHHcCCC---CCCCccCceE--EEEEEEe
Confidence            589999764  2     2455  456666 8899999999999999999998776322   2578999885  8999999


Q ss_pred             cCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCCCCccchhcccC
Q 018404           90 DSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILG  138 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~  138 (356)
                      |++   +++||+|.+                               .|+|++|++++.+. ++++ |++++.. +++.+ 
T Consensus        66 G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~~~~-~aa~~-  138 (319)
T cd08242          66 PEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLEN-LHVV-PDLVPDE-QAVFA-  138 (319)
T ss_pred             CCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHH-eEEC-cCCCCHH-Hhhhh-
Confidence            988   679999962                               26899999999988 9999 9985443 33332 


Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       139 ~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      ..+.++|.++ ...+++++++|+|+| +|++|++++|+|+.+|++|+++++++++.          +.++ ++|++.+++
T Consensus       139 ~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~----------~~~~-~~g~~~~~~  205 (319)
T cd08242         139 EPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKL----------ALAR-RLGVETVLP  205 (319)
T ss_pred             hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHH----------HHHH-HcCCcEEeC
Confidence            4555677666 668899999999997 89999999999999999999999998888          8898 799988776


Q ss_pred             cCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeecee
Q 018404          219 YKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFV  296 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (356)
                      +..  .        +.+ ++|++|||+|+ ..+..++++|+++|+++..+.....      ...+...++.++.++.+..
T Consensus       206 ~~~--~--------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~i~~~~  269 (319)
T cd08242         206 DEA--E--------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGP------ASFDLTKAVVNEITLVGSR  269 (319)
T ss_pred             ccc--c--------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC------CccCHHHheecceEEEEEe
Confidence            543  1        233 89999999998 6889999999999999987653321      2234445667777776654


Q ss_pred             eecchhhHHHHHHHHHHHHHcCCC--ccceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          297 VFDYFPQYSRFLDAVLPYIREGKV--VYVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       297 ~~~~~~~~~~~l~~~~~~~~~g~l--~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      ...        ++++++++++|++  .+.+.+.|+++++++||+.+.++. .+|+|++
T Consensus       270 ~~~--------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         270 CGP--------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             ccc--------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence            332        6778899999999  456788999999999999998665 5799875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.9e-31  Score=247.95  Aligned_cols=318  Identities=24%  Similarity=0.321  Sum_probs=246.6

Q ss_pred             cEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC-CCCCCCCCCCCcceecEEEEEe
Q 018404           11 KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ-DPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        11 ~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~-~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |++++...  +.+.  .+.+  .+.+.| ++.+++|+||+.++++|+.|+....... .....|.++|||+  +|+|+.+
T Consensus         1 ~~~~~~~~--~~~~--~~~~--~~~~~~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~--~G~v~~~   71 (337)
T cd08275           1 RAVVLTGF--GGLD--KLKV--EKEALP-EPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFEC--AGTVEAV   71 (337)
T ss_pred             CeEEEcCC--CCcc--ceEE--EecCCC-CCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCccee--EEEEEEE
Confidence            46666654  4442  3455  345555 6789999999999999999998765322 2234577899985  8999999


Q ss_pred             cCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCC
Q 018404           90 DSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAAS  166 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~  166 (356)
                      |+++.++++||+|+++   |+|++|+.++... ++++ |++++.. +++.++..+.+||+++.....+.+|++|+|+|++
T Consensus        72 g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~  148 (337)
T cd08275          72 GEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQ-VFPL-PDGMSFE-EAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAA  148 (337)
T ss_pred             CCCCcCCCCCCEEEEecCCCeeeeEEEecHHH-eEEC-CCCCCHH-HHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCc
Confidence            9999999999999997   7899999999988 9999 8885544 5777889999999999888899999999999999


Q ss_pred             chHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCC
Q 018404          167 GAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG  245 (356)
Q Consensus       167 g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g  245 (356)
                      |++|++++++++.+ +..++... .+++.          +.++ .+|.+.+++.... ++.+.+++.+++++|++|||+|
T Consensus       149 g~~g~~~~~~a~~~~~~~~~~~~-~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g  215 (337)
T cd08275         149 GGVGLAAGQLCKTVPNVTVVGTA-SASKH----------EALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALG  215 (337)
T ss_pred             chHHHHHHHHHHHccCcEEEEeC-CHHHH----------HHHH-HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCc
Confidence            99999999999999 43333222 23455          7777 8898888888765 7778888777558999999999


Q ss_pred             chHHHHHHHhhccCCeEEEEccccccCCCCC-----------ccccchHHHHhhcceeeceeeecc---hhhHHHHHHHH
Q 018404          246 GKMLDAVLLNMRLHGRIAACGMISQYNLSQP-----------EGVHNLMNVVYKRIRMEGFVVFDY---FPQYSRFLDAV  311 (356)
Q Consensus       246 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~  311 (356)
                      +.....++++++++|+++.+|.....+....           .........+.+++++.++.....   .......+.++
T Consensus       216 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (337)
T cd08275         216 GEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKL  295 (337)
T ss_pred             HHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHH
Confidence            9888999999999999999986432110000           011122455778888887765422   12223567889


Q ss_pred             HHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          312 LPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       312 ~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +++++++.+.+.....|++++++++++.+.+++..||+++++
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         296 LKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            999999999888778899999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=100.00  E-value=8.1e-32  Score=244.51  Aligned_cols=284  Identities=20%  Similarity=0.252  Sum_probs=233.2

Q ss_pred             CeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc--cccceeEeecCCCcce
Q 018404           44 NAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT--TGWEEYSLIKNPQGLF  121 (356)
Q Consensus        44 ~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~l~  121 (356)
                      ++|+||+.++++|++|+.......  ..+|.++|||+  +|+|+++|+++.++++||+|+++  |+|++|+.++.+. ++
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~--~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~~   75 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLEC--SGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARL-VV   75 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceee--eEEEEeecCCccCCCCCCEEEEEecCcccceEEechhh-eE
Confidence            589999999999999998776322  24578999985  89999999999999999999997  7999999999998 99


Q ss_pred             eecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchh
Q 018404          122 KIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQS  201 (356)
Q Consensus       122 ~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~  201 (356)
                      ++ |++++.. +++.+++.+.+||.++.+...+++|++|+|+|++|++|++++|+++.+|++|+++++++++.       
T Consensus        76 ~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~-------  146 (293)
T cd05195          76 KI-PDSLSFE-EAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKR-------  146 (293)
T ss_pred             eC-CCCCCHH-HHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-------
Confidence            99 8885554 57778899999999998888999999999999999999999999999999999999988887       


Q ss_pred             HHHHHHHhhcC--CCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCcc
Q 018404          202 QLVELLKNKFG--FDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEG  278 (356)
Q Consensus       202 ~~~~~~~~~~g--~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  278 (356)
                         +.++ +++  .+.++++... ++.+.+++.+++ ++|.+|||+|+..+..++++++++|+++.+|.......    .
T Consensus       147 ---~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~----~  217 (293)
T cd05195         147 ---EFLR-ELGGPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSN----S  217 (293)
T ss_pred             ---HHHH-HhCCCcceEeecCch-hHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccC----C
Confidence               8887 776  6778887665 777888888776 89999999999999999999999999999987432210    0


Q ss_pred             ccchHHHHhhcceeeceeeecc----hhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          279 VHNLMNVVYKRIRMEGFVVFDY----FPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      ... ...+.+++.+....+..+    +....+.+..++++++++.+++.++..+++++++++++.+..++..+|+|+
T Consensus       218 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         218 KLG-MRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             ccc-hhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            011 122334555555443322    223356788899999999999888888999999999999998888888874

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4e-31  Score=243.90  Aligned_cols=293  Identities=26%  Similarity=0.303  Sum_probs=224.3

Q ss_pred             EEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCC---CCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc--
Q 018404           31 KASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD---PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT--  105 (356)
Q Consensus        31 ~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~---~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~--  105 (356)
                      +..+.|.| ++++++|+|++.++++|+.|+........   ....|.++|||.  +|+|.++|+++.++++||+|++.  
T Consensus        15 ~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~--~G~v~~~G~~v~~~~~Gd~V~~~~~   91 (319)
T cd08267          15 LEVEVPIP-TPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDF--AGEVVAVGSGVTRFKVGDEVFGRLP   91 (319)
T ss_pred             ccccCCCC-CCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCccccee--eEEEEEeCCCCCCCCCCCEEEEecc
Confidence            55567777 78999999999999999999887652111   223467899884  89999999999999999999985  


Q ss_pred             ----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcC
Q 018404          106 ----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMG  181 (356)
Q Consensus       106 ----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g  181 (356)
                          |+|++|+.++.+. ++++ |++++.. +++.+++.+.+||+++.....+++|++|+|+|++|++|++++++|+.+|
T Consensus        92 ~~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g  168 (319)
T cd08267          92 PKGGGALAEYVVAPESG-LAKK-PEGVSFE-EAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALG  168 (319)
T ss_pred             CCCCceeeEEEEechhh-eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC
Confidence                7899999999988 9999 9985554 5778899999999999887779999999999999999999999999999


Q ss_pred             CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCch--HHHHHHHhhcc
Q 018404          182 CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGK--MLDAVLLNMRL  258 (356)
Q Consensus       182 ~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~--~~~~~~~~l~~  258 (356)
                      ++|++++++ ++.          +.++ ++|.+++++.... ++.   ...+.+ ++|++++|+|+.  .....+..+++
T Consensus       169 ~~v~~~~~~-~~~----------~~~~-~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~  232 (319)
T cd08267         169 AHVTGVCST-RNA----------ELVR-SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKP  232 (319)
T ss_pred             CEEEEEeCH-HHH----------HHHH-HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEECCCchHHHHHHhhhccCC
Confidence            999999876 666          7787 8999888877654 443   334444 899999999953  33344445999


Q ss_pred             CCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHH
Q 018404          259 HGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALV  338 (356)
Q Consensus       259 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~  338 (356)
                      +|+++.+|......... ...... ........+......  +.  .+.+.++++++.++.+.+.+.+.|+++++++|++
T Consensus       233 ~g~~i~~g~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~--~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~  306 (319)
T cd08267         233 GGRYVSVGGGPSGLLLV-LLLLPL-TLGGGGRRLKFFLAK--PN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYR  306 (319)
T ss_pred             CCEEEEecccccccccc-ccccch-hhccccceEEEEEec--CC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHH
Confidence            99999998743321100 000000 111111122221111  11  6788999999999999888888999999999999


Q ss_pred             HHHcCCCcceEEE
Q 018404          339 GLFSGRNVGKQLV  351 (356)
Q Consensus       339 ~~~~~~~~gk~vv  351 (356)
                      .+.+++..+|+++
T Consensus       307 ~~~~~~~~~~vvv  319 (319)
T cd08267         307 RLKSGRARGKVVI  319 (319)
T ss_pred             HHhcCCCCCcEeC
Confidence            9998888888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=100.00  E-value=1.5e-30  Score=235.86  Aligned_cols=279  Identities=20%  Similarity=0.259  Sum_probs=227.5

Q ss_pred             EEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc--cccceeEeecCCCcceeecC
Q 018404           48 VKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT--TGWEEYSLIKNPQGLFKIHH  125 (356)
Q Consensus        48 V~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~l~~~~p  125 (356)
                      ||+.++++|+.|+.......   ..|.++|||+  +|+|+++|+++.++++||+|+++  |+|++|+.++.+. ++++ |
T Consensus         2 i~v~~~~i~~~d~~~~~g~~---~~~~~~g~e~--~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~~~~-p   74 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLL---PGEAVLGGEC--AGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARL-VVPI-P   74 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCC---CCCCCCCcee--EEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHH-eEEC-C
Confidence            79999999999998776321   2367899985  89999999999999999999996  7999999999988 9999 9


Q ss_pred             CCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHH
Q 018404          126 TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVE  205 (356)
Q Consensus       126 ~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~  205 (356)
                      ++++.. +++++++.+.+||.++.+...+.+|++|+|+|++|++|++++++++.+|++|+++++++++.          +
T Consensus        75 ~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~----------~  143 (288)
T smart00829       75 DGLSFE-EAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKR----------D  143 (288)
T ss_pred             CCCCHH-HHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH----------H
Confidence            986554 57788899999999987788999999999999999999999999999999999999998888          8


Q ss_pred             HHHhhcCC--CEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccch
Q 018404          206 LLKNKFGF--DDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNL  282 (356)
Q Consensus       206 ~~~~~~g~--~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  282 (356)
                      .++ ++|.  +.++++.+. ++.+.+.+.+++ ++|++||++|+..+..++++++++|+++.+|......    ......
T Consensus       144 ~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~  217 (288)
T smart00829      144 FLR-ELGIPDDHIFSSRDL-SFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRD----NSQLGM  217 (288)
T ss_pred             HHH-HcCCChhheeeCCCc-cHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcc----ccccch
Confidence            887 8998  778887765 777788877776 8999999999888899999999999999998643210    011122


Q ss_pred             HHHHhhcceeeceeeecc---hhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          283 MNVVYKRIRMEGFVVFDY---FPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      .. +.+++++.+.....+   +....+.+..++++++++++.+...+.|++++++++++.+..++..+|+++
T Consensus       218 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      218 AP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             hh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            22 345566555443221   222345678888999999988766678999999999999998887788774

Enoylreductase in Polyketide synthases.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.98  E-value=2.7e-31  Score=260.56  Aligned_cols=286  Identities=21%  Similarity=0.231  Sum_probs=240.5

Q ss_pred             CCCCCeEEEEEEEeecCHHhhhhhccCCCC-------CCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc---cccc
Q 018404           40 EEGSNAILVKNLYLSCDPYMRARMSFNQDP-------DFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT---TGWE  109 (356)
Q Consensus        40 ~~~~~evlV~v~~~~i~~~d~~~~~~~~~~-------~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~---g~~~  109 (356)
                      +.+++.=+.-|+|++||..|+....+...+       .....++|-||  +|+          .+-|.||+++   -+++
T Consensus      1441 ~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEF--sGR----------d~~GrRvM~mvpAksLA 1508 (2376)
T KOG1202|consen 1441 PTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEF--SGR----------DASGRRVMGMVPAKSLA 1508 (2376)
T ss_pred             CCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceee--ccc----------cCCCcEEEEeeehhhhh
Confidence            567888999999999999999877633222       12356778665  444          5789999998   4789


Q ss_pred             eeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 018404          110 EYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG  189 (356)
Q Consensus       110 ~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~  189 (356)
                      +.+.++.+. +|.+ |.++.+. ++++.|+.|.|||++|..++..++|+++||++|+||+|++||.+|.++|++|+.++.
T Consensus      1509 Tt~l~~rd~-lWev-P~~WTle-eAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVG 1585 (2376)
T KOG1202|consen 1509 TTVLASRDF-LWEV-PSKWTLE-EASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVG 1585 (2376)
T ss_pred             hhhhcchhh-hhhC-Ccccchh-hcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecC
Confidence            999999999 9999 9996666 799999999999999999999999999999999999999999999999999999999


Q ss_pred             CcchhccccchhHHHHHHHhhcCC---CEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEE
Q 018404          190 SREKVWLIPMQSQLVELLKNKFGF---DDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~  265 (356)
                      +++++          +.+++.|.-   ..+-|+++. +|...+.+.|.| |+|+|++....+.++.++|||+.+||+..+
T Consensus      1586 SaEKR----------efL~~rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEI 1654 (2376)
T KOG1202|consen 1586 SAEKR----------EFLLKRFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEI 1654 (2376)
T ss_pred             cHHHH----------HHHHHhchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeee
Confidence            99998          888856653   456677776 899999999999 999999999999999999999999999999


Q ss_pred             ccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHH----HHcCCCccceeeeeCCCcHHHHHHHHH
Q 018404          266 GMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY----IREGKVVYVEDVADGLENAPAALVGLF  341 (356)
Q Consensus       266 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~g~l~~~i~~~~~l~~~~~a~~~~~  341 (356)
                      |.-..     ...+...+..|.+|.++.|..+..+.+.-.+.+.++..+    |++|..+|..+++|+-.++++||+.|.
T Consensus      1655 GKfDL-----SqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMa 1729 (2376)
T KOG1202|consen 1655 GKFDL-----SQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMA 1729 (2376)
T ss_pred             cceec-----ccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHh
Confidence            97432     223346678899999999988776644334455555555    455788899999999999999999999


Q ss_pred             cCCCcceEEEEecCC
Q 018404          342 SGRNVGKQLVVVSRE  356 (356)
Q Consensus       342 ~~~~~gk~vv~~~~~  356 (356)
                      +|+.+||+|+++..|
T Consensus      1730 sGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1730 SGKHIGKVVIKVRAE 1744 (2376)
T ss_pred             ccCccceEEEEEccc
Confidence            999999999998653

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.97  E-value=1.8e-30  Score=235.80  Aligned_cols=229  Identities=19%  Similarity=0.249  Sum_probs=187.8

Q ss_pred             CCCCcceecEEEEEecCCCC------CCCCCCEEEE-------------------------------------cccccee
Q 018404           75 TPGSPIEGFGVAKVVDSGHP------EFKKGDLVWG-------------------------------------TTGWEEY  111 (356)
Q Consensus        75 v~G~e~~~~G~V~~vG~~v~------~~~~Gd~V~~-------------------------------------~g~~~~~  111 (356)
                      ++|||+  +|+|+++|++|+      ++++||||..                                     .|+|+||
T Consensus         1 v~GHE~--~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey   78 (280)
T TIGR03366         1 VLGHEI--VGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEH   78 (280)
T ss_pred             CCCccc--ceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceee
Confidence            589996  899999999999      8999999963                                     1678999


Q ss_pred             EeecCC-CcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeC
Q 018404          112 SLIKNP-QGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAG  189 (356)
Q Consensus       112 ~~v~~~-~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~  189 (356)
                      +++++. . ++++ |+++++. .++.+++.+.|||+++.. ....+|++|+|+| +|++|++++|+||.+|++ |+++++
T Consensus        79 ~~v~~~~~-~~~l-P~~~~~~-~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G-~G~vG~~~~~~ak~~G~~~Vi~~~~  153 (280)
T TIGR03366        79 CHLPAGTA-IVPV-PDDLPDA-VAAPAGCATATVMAALEA-AGDLKGRRVLVVG-AGMLGLTAAAAAAAAGAARVVAADP  153 (280)
T ss_pred             EEecCCCc-EEEC-CCCCCHH-HhhHhhhHHHHHHHHHHh-ccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC
Confidence            999987 6 9999 9996554 577788899999999965 4566999999998 599999999999999996 888888


Q ss_pred             CcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEcc
Q 018404          190 SREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      +++++          +.++ ++|++.++++.+   ..+.+.+.+.+ ++|++|||+|+ ..+..++++++++|+++.+|.
T Consensus       154 ~~~r~----------~~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~  219 (280)
T TIGR03366       154 SPDRR----------ELAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGS  219 (280)
T ss_pred             CHHHH----------HHHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEecc
Confidence            88887          8888 999998887643   34556667666 89999999998 678999999999999999997


Q ss_pred             ccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcC--CCc--cceeeeeCCCcH
Q 018404          268 ISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREG--KVV--YVEDVADGLENA  333 (356)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g--~l~--~~i~~~~~l~~~  333 (356)
                      ....    ...+.+...++.+++++.|+....     .++++++++++.++  ++.  +.+++.|+++++
T Consensus       220 ~~~~----~~~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       220 VFPG----GPVALDPEQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             CCCC----CceeeCHHHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            4321    112345677888999999876554     56789999999974  433  568888999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1e-28  Score=222.33  Aligned_cols=241  Identities=27%  Similarity=0.330  Sum_probs=198.5

Q ss_pred             eEEEEEEEeecCHHhhhhhccCCC-CCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc------------------
Q 018404           45 AILVKNLYLSCDPYMRARMSFNQD-PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT------------------  105 (356)
Q Consensus        45 evlV~v~~~~i~~~d~~~~~~~~~-~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~------------------  105 (356)
                      ||+|++.++++|+.|+....+... ...+|.++|||+  +|+|+++|++++.+++||+|+++                  
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~--~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~   78 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEG--AGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGG   78 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCccccccc--EEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCC
Confidence            689999999999999988763322 344578999985  89999999999999999999973                  


Q ss_pred             --------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHH
Q 018404          106 --------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFA  177 (356)
Q Consensus       106 --------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la  177 (356)
                              |+|++|+.++.+. ++++ |+++++. +++.++.++.|||+++.....+.++++|+|+|+++ +|+++++++
T Consensus        79 ~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a  154 (271)
T cd05188          79 GILGEGLDGGFAEYVVVPADN-LVPL-PDGLSLE-EAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLA  154 (271)
T ss_pred             CEeccccCCcceEEEEechHH-eEEC-CCCCCHH-HhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHH
Confidence                    6899999999998 9999 9986554 57788899999999998877779999999999776 999999999


Q ss_pred             HHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHh
Q 018404          178 KLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLN  255 (356)
Q Consensus       178 ~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~  255 (356)
                      +.+|++|+++++++++.          +.++ ++|.+.++++.+. ++.+.+. .+.+ ++|++|+++|+ ..+..++++
T Consensus       155 ~~~g~~v~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~  221 (271)
T cd05188         155 KAAGARVIVTDRSDEKL----------ELAK-ELGADHVIDYKEE-DLEEELR-LTGGGGADVVIDAVGGPETLAQALRL  221 (271)
T ss_pred             HHcCCeEEEEcCCHHHH----------HHHH-HhCCceeccCCcC-CHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHh
Confidence            99999999999998887          8887 8888888887765 6666665 4444 89999999999 889999999


Q ss_pred             hccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHH
Q 018404          256 MRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY  314 (356)
Q Consensus       256 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  314 (356)
                      ++++|+++.+|......     ........+.+++++.++....     ..++++++++
T Consensus       222 l~~~G~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  270 (271)
T cd05188         222 LRPGGRIVVVGGTSGGP-----PLDDLRRLLFKELTIIGSTGGT-----REDFEEALDL  270 (271)
T ss_pred             cccCCEEEEEccCCCCC-----CcccHHHHHhcceEEEEeecCC-----HHHHHHHHhh
Confidence            99999999998754321     1122456678899999887765     4445555544

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.95  E-value=6.7e-27  Score=211.92  Aligned_cols=248  Identities=25%  Similarity=0.276  Sum_probs=195.2

Q ss_pred             CCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEccccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHH
Q 018404           69 PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGF  148 (356)
Q Consensus        69 ~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l  148 (356)
                      +-++|.++|||+  +|+|+++|++++++++||+|+++++|++|+.++.+. ++++ |+++++. +++.+ ++++|||+++
T Consensus        17 ~~~~p~v~g~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~-~~~i-p~~l~~~-~aa~~-~~~~ta~~~~   90 (277)
T cd08255          17 KLPLPLPPGYSS--VGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANL-LVPL-PDGLPPE-RAALT-ALAATALNGV   90 (277)
T ss_pred             cCcCCcccCcce--eEEEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHH-eeEC-cCCCCHH-HhHHH-HHHHHHHHHH
Confidence            344789999985  899999999999999999999999999999999998 9999 9985554 45556 7899999998


Q ss_pred             HHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcC-CCEEEecCCcccHH
Q 018404          149 YEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFG-FDDAFNYKEENDLD  226 (356)
Q Consensus       149 ~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~vv~~~~~~~~~  226 (356)
                      . .+++++|++|+|+| .|++|++++++|+.+|++ |+++++++++.          +.++ ++| .+.+++..+     
T Consensus        91 ~-~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-----  152 (277)
T cd08255          91 R-DAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARR----------ELAE-ALGPADPVAADTA-----  152 (277)
T ss_pred             H-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHH----------HHHH-HcCCCccccccch-----
Confidence            5 68899999999997 799999999999999998 99999998988          8777 888 455543322     


Q ss_pred             HHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc---h
Q 018404          227 AALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY---F  301 (356)
Q Consensus       227 ~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  301 (356)
                          ..+.+ ++|++|||+|. ..+..++++++++|+++.+|..... .     ......+..+.+++.+......   .
T Consensus       153 ----~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (277)
T cd08255         153 ----DEIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-P-----LLLGEEFHFKRLPIRSSQVYGIGRYD  222 (277)
T ss_pred             ----hhhcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-c-----cccHHHHHhccCeEEeeccccccccc
Confidence                11233 89999999886 7888999999999999999875432 0     1111234445556666554322   0


Q ss_pred             ----hhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcC-CCcceEE
Q 018404          302 ----PQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSG-RNVGKQL  350 (356)
Q Consensus       302 ----~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~-~~~gk~v  350 (356)
                          ....+.++++++++.++.+++.+.+.|+++++++|++.+.++ ....|++
T Consensus       223 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~  276 (277)
T cd08255         223 RPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVV  276 (277)
T ss_pred             ccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence                112367899999999999988788889999999999999876 3334655

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.76  E-value=2.3e-17  Score=132.12  Aligned_cols=128  Identities=28%  Similarity=0.450  Sum_probs=114.5

Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc
Q 018404          168 AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG  246 (356)
Q Consensus       168 ~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~  246 (356)
                      ++|++++|+||.+|++|++++++++++          +.++ ++|+++++++++. ++.+++++.+++ ++|+||||+|.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~----------~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~   68 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKL----------ELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGS   68 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHH----------HHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHH----------HHHH-hhccccccccccc-ccccccccccccccceEEEEecCc
Confidence            689999999999999999999999998          9999 9999999999987 899999999998 99999999995


Q ss_pred             -hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHc
Q 018404          247 -KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIRE  317 (356)
Q Consensus       247 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  317 (356)
                       ..++.++++++++|+++.+|....     .....+...++.+++++.+++..+     .++++++++++.+
T Consensus        69 ~~~~~~~~~~l~~~G~~v~vg~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la~  130 (130)
T PF00107_consen   69 GDTLQEAIKLLRPGGRIVVVGVYGG-----DPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLAQ  130 (130)
T ss_dssp             HHHHHHHHHHEEEEEEEEEESSTST-----SEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHhccCCEEEEEEccCC-----CCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhcC
Confidence             899999999999999999998652     345577889999999999998887     6777777777653

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.65  E-value=4.3e-16  Score=120.72  Aligned_cols=78  Identities=23%  Similarity=0.218  Sum_probs=67.1

Q ss_pred             CCeEEEEEEEeecCHHhhhhhcc-CCCCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc----------------
Q 018404           43 SNAILVKNLYLSCDPYMRARMSF-NQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT----------------  105 (356)
Q Consensus        43 ~~evlV~v~~~~i~~~d~~~~~~-~~~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~----------------  105 (356)
                      |+||+|||.++|||++|++.+.+ ......+|.++|||+  +|+|+++|+++++|++||+|++.                
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~   78 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEG--VGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP   78 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEE--EEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccce--eeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence            68999999999999999999885 566778899999995  99999999999999999999873                


Q ss_pred             --------------cccceeEeecCCCcceee
Q 018404          106 --------------TGWEEYSLIKNPQGLFKI  123 (356)
Q Consensus       106 --------------g~~~~~~~v~~~~~l~~~  123 (356)
                                    |+|+||+++++++ ++|+
T Consensus        79 ~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~v  109 (109)
T PF08240_consen   79 NLCPNPEVLGLGLDGGFAEYVVVPARN-LVPV  109 (109)
T ss_dssp             GGTTTBEETTTSSTCSSBSEEEEEGGG-EEEE
T ss_pred             ccCCCCCEeEcCCCCcccCeEEEehHH-EEEC
Confidence                          7889999999888 8875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.55  E-value=1e-14  Score=116.28  Aligned_cols=122  Identities=27%  Similarity=0.349  Sum_probs=81.3

Q ss_pred             cCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCC--chHH-HHHHHhhccCCeEEEEccccccCCCCCccccchHHHHh
Q 018404          211 FGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG--GKML-DAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVY  287 (356)
Q Consensus       211 ~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  287 (356)
                      +|+++++||+.. ++      ...+++|+||||+|  ++.+ ..++++| ++|+++.++.           .........
T Consensus         1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----------~~~~~~~~~   61 (127)
T PF13602_consen    1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----------DLPSFARRL   61 (127)
T ss_dssp             CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----------HHHHHHHHH
T ss_pred             CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----------cccchhhhh
Confidence            589999999875 55      22348999999999  6444 7788888 9999999974           011111112


Q ss_pred             hcceeeceeeecc-h-hhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          288 KRIRMEGFVVFDY-F-PQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       288 ~~~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      +...+....+... + +...+.++++.+++.+|++++.+.++|||+++++|++.+.+++..||+|+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            2222222222211 1 22467799999999999999999999999999999999999999999996

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.32  E-value=3.6e-11  Score=113.09  Aligned_cols=178  Identities=11%  Similarity=0.076  Sum_probs=130.6

Q ss_pred             hHHHHHHHHHHcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          141 GMTAWAGFYEICA-PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       141 ~~tA~~~l~~~~~-~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      +...+.++.+..+ ..+|++|+|.| .|.+|+.+++.++.+|++|++++.++.++          +.++ ++|++.+ + 
T Consensus       185 g~s~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~----------~~A~-~~G~~~~-~-  250 (413)
T cd00401         185 RESLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICA----------LQAA-MEGYEVM-T-  250 (413)
T ss_pred             chhhHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhH----------HHHH-hcCCEEc-c-
Confidence            3445566655433 36899999999 89999999999999999999999998887          8888 8887432 1 


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHH-HHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceee
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAV-LLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV  297 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (356)
                           ..+.+     .++|+||+|+|. ..+... ++.++++|+++.+|..        ....+...+..+++++.+...
T Consensus       251 -----~~e~v-----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~  312 (413)
T cd00401         251 -----MEEAV-----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKP  312 (413)
T ss_pred             -----HHHHH-----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccC
Confidence                 22223     248999999998 566665 9999999999999952        123566667778888777654


Q ss_pred             ecchhhHHHHHH--HHHHHHHcCCC---ccceeee-----eCCC-cHHHHHHHHHcCCCc-ceEEEEec
Q 018404          298 FDYFPQYSRFLD--AVLPYIREGKV---VYVEDVA-----DGLE-NAPAALVGLFSGRNV-GKQLVVVS  354 (356)
Q Consensus       298 ~~~~~~~~~~l~--~~~~~~~~g~l---~~~i~~~-----~~l~-~~~~a~~~~~~~~~~-gk~vv~~~  354 (356)
                      ...    ...++  +.+.++.+|.+   .+.+++.     ++|+ ++.+++..+.++... -|+++.++
T Consensus       313 ~~~----~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         313 QVD----RYELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             Ccc----eEEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence            321    11344  68999999988   3456666     7888 999999998876543 46666543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.21  E-value=2.1e-10  Score=110.64  Aligned_cols=148  Identities=16%  Similarity=0.089  Sum_probs=104.5

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCc----------
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEE----------  222 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~----------  222 (356)
                      ..++++|+|+| +|.+|+++++.|+.+|++|++++.+++++          +.++ ++|++.+ +|..++          
T Consensus       162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rl----------e~ae-slGA~~v~i~~~e~~~~~~gya~~  229 (509)
T PRK09424        162 KVPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVA----------EQVE-SMGAEFLELDFEEEGGSGDGYAKV  229 (509)
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HcCCeEEEeccccccccccchhhh
Confidence            45799999999 89999999999999999999999999998          8888 8999744 554331          


Q ss_pred             --ccHHHHHHHh-CC--CCccEEEeCCCch------H-HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHh-hc
Q 018404          223 --NDLDAALKRC-FP--EGIDIYFEHVGGK------M-LDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVY-KR  289 (356)
Q Consensus       223 --~~~~~~~~~~-~~--~~~d~vid~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~  289 (356)
                        +++.+...+. .+  +++|+||+|+|.+      . .+.+++.++++|+++.+|...+.+.+.   ..+...++. ++
T Consensus       230 ~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~---t~~~~~v~~~~g  306 (509)
T PRK09424        230 MSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCEL---TVPGEVVVTDNG  306 (509)
T ss_pred             cchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCccc---ccCccceEeECC
Confidence              0222222222 22  2799999999962      4 499999999999999999753332111   122233444 78


Q ss_pred             ceeeceeeecchhhHHHHHHHHHHHHHcCCCc
Q 018404          290 IRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV  321 (356)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~  321 (356)
                      +++.|.+..  +   .+.-.+..+++.++.+.
T Consensus       307 Vti~Gv~n~--P---~~~p~~As~lla~~~i~  333 (509)
T PRK09424        307 VTIIGYTDL--P---SRLPTQSSQLYGTNLVN  333 (509)
T ss_pred             EEEEEeCCC--c---hhHHHHHHHHHHhCCcc
Confidence            887776532  2   23344577777777665

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.45  E-value=3.6e-06  Score=72.67  Aligned_cols=81  Identities=26%  Similarity=0.363  Sum_probs=63.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC----CEEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF----DDAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~~~~  231 (356)
                      +++.++|+||++|+|.++++.+...|++|+.+.|+.+++          +.+.++++.    ...+|-.+.++....+..
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL----------~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~   74 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERL----------EALADEIGAGAALALALDVTDRAAVEAAIEA   74 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHH----------HHHHHhhccCceEEEeeccCCHHHHHHHHHH
Confidence            457899999999999999999999999999999999998          777667772    344565554344444554


Q ss_pred             hCCC--CccEEEeCCCc
Q 018404          232 CFPE--GIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~~--~~d~vid~~g~  246 (356)
                      ....  .+|++++..|-
T Consensus        75 ~~~~~g~iDiLvNNAGl   91 (246)
T COG4221          75 LPEEFGRIDILVNNAGL   91 (246)
T ss_pred             HHHhhCcccEEEecCCC
Confidence            4333  69999999983

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.40  E-value=2.3e-05  Score=70.89  Aligned_cols=166  Identities=16%  Similarity=0.176  Sum_probs=104.1

Q ss_pred             cEEEEEecCCCCCCCCCCEEEEccccceeEeecCCCcc----------------------eee--cCCCCCccchhccc-
Q 018404           83 FGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGL----------------------FKI--HHTDVPLSYYTGIL-  137 (356)
Q Consensus        83 ~G~V~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~l----------------------~~~--~p~~~~~~~~~a~l-  137 (356)
                      .|.-.++.|+++++.+|.||+|+=..++|+++.... +                      .++  +|..-+.....-+| 
T Consensus        36 WGfA~VveS~~~~i~vGerlyGy~P~ashl~l~p~~-v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~~~e~~~~Ll  114 (314)
T PF11017_consen   36 WGFATVVESRHPGIAVGERLYGYFPMASHLVLEPGK-VSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDPEREDWQMLL  114 (314)
T ss_pred             ceEEEEEeeCCCCccCccEEEeeccccceeEEeccc-cCCCccccChhhhCcCchhhhceeecCCCcccCcchhHHHHHH
Confidence            566677888999999999999984444444433222 1                      011  01100011012223 


Q ss_pred             CcchHHHHHHHHHHcC---CCCCCEEEEecCCchHHHHHHHHHH-Hc-CCEEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          138 GMPGMTAWAGFYEICA---PKKGEYIYVSAASGAVGQLVGQFAK-LM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       138 ~~~~~tA~~~l~~~~~---~~~g~~VlI~ga~g~vG~~ai~la~-~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      --.+.|.|..- +...   .-..+.|+|..|+|-.++.++..++ .. +.+++.+++..++           ...+ .+|
T Consensus       115 rPLf~Tsfll~-d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~-----------~Fve-~lg  181 (314)
T PF11017_consen  115 RPLFITSFLLD-DFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNV-----------AFVE-SLG  181 (314)
T ss_pred             HHHHHHHHHHH-HHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcch-----------hhhh-ccC
Confidence            23355666443 3321   2234689999999999999999888 33 5599999988777           6677 888


Q ss_pred             C-CEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCC-eEEEEcccc
Q 018404          213 F-DDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHG-RIAACGMIS  269 (356)
Q Consensus       213 ~-~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G-~~v~~g~~~  269 (356)
                      . +.|+.|++       |.++.....-+++|+.|+ +......+.++..= ..+.+|...
T Consensus       182 ~Yd~V~~Yd~-------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th  234 (314)
T PF11017_consen  182 CYDEVLTYDD-------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH  234 (314)
T ss_pred             CceEEeehhh-------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence            7 88888854       333333456799999999 56666666666653 456677543

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.40  E-value=8.7e-06  Score=73.53  Aligned_cols=170  Identities=18%  Similarity=0.216  Sum_probs=100.2

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLD  226 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~  226 (356)
                      +.+++|++||.+| +|+ |..++++++..+.  +|++++.+++.+          +.+++   .++...+ +.... ++.
T Consensus        73 ~~~~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l----------~~A~~~~~~~g~~~v-~~~~~-d~~  138 (272)
T PRK11873         73 AELKPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEML----------AKARANARKAGYTNV-EFRLG-EIE  138 (272)
T ss_pred             ccCCCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHH----------HHHHHHHHHcCCCCE-EEEEc-chh
Confidence            5688999999999 666 8888888888765  799999998887          55542   3444322 11111 221


Q ss_pred             HHHHHhCCCCccEEEeCC------Cc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeec
Q 018404          227 AALKRCFPEGIDIYFEHV------GG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFD  299 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~------g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (356)
                       .+ .+..+.+|+|+...      .. ..+..+.+.|+|+|+++..+.....+.       .  ....+...+.+.....
T Consensus       139 -~l-~~~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~-------~--~~~~~~~~~~~~~~~~  207 (272)
T PRK11873        139 -AL-PVADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGEL-------P--EEIRNDAELYAGCVAG  207 (272)
T ss_pred             -hC-CCCCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCC-------C--HHHHHhHHHHhccccC
Confidence             11 12233799998643      22 578999999999999998775432110       1  1111222221111111


Q ss_pred             chhhHHHHHHHHHHHHHc-CCCc--cceeeeeCCCcHHHHHHHH--HcCCCcceEEE
Q 018404          300 YFPQYSRFLDAVLPYIRE-GKVV--YVEDVADGLENAPAALVGL--FSGRNVGKQLV  351 (356)
Q Consensus       300 ~~~~~~~~l~~~~~~~~~-g~l~--~~i~~~~~l~~~~~a~~~~--~~~~~~gk~vv  351 (356)
                      .     ...+++.+++++ |...  ......++++++.++++.+  .+++..++.++
T Consensus       208 ~-----~~~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  259 (272)
T PRK11873        208 A-----LQEEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV  259 (272)
T ss_pred             C-----CCHHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence            0     112345555555 4322  2234467899999999988  66655555554

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.37  E-value=2.5e-06  Score=82.46  Aligned_cols=106  Identities=20%  Similarity=0.224  Sum_probs=79.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCc-----------
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEE-----------  222 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~-----------  222 (356)
                      .++++|+|+| .|.+|++++++++.+|++|++.+++.+++          +.++ ++|.+. .++..+.           
T Consensus       162 vp~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rl----------e~a~-~lGa~~v~v~~~e~g~~~~gYa~~~  229 (511)
T TIGR00561       162 VPPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVK----------EQVQ-SMGAEFLELDFKEEGGSGDGYAKVM  229 (511)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HcCCeEEeccccccccccccceeec
Confidence            3578999999 89999999999999999999999999988          8888 898864 2332110           


Q ss_pred             -ccHHHHHHHhCC---CCccEEEeCC---Cc-h---HHHHHHHhhccCCeEEEEccccccC
Q 018404          223 -NDLDAALKRCFP---EGIDIYFEHV---GG-K---MLDAVLLNMRLHGRIAACGMISQYN  272 (356)
Q Consensus       223 -~~~~~~~~~~~~---~~~d~vid~~---g~-~---~~~~~~~~l~~~G~~v~~g~~~~~~  272 (356)
                       +++.+...+...   .++|++|+|+   |. .   ..+.+++.+++++.+|+++...+.+
T Consensus       230 s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn  290 (511)
T TIGR00561       230 SEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGN  290 (511)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCC
Confidence             123333333222   2799999999   65 2   5678899999999999998754433

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.25  E-value=1.4e-05  Score=75.90  Aligned_cols=104  Identities=17%  Similarity=0.189  Sum_probs=78.6

Q ss_pred             HHHHHHHHHHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecC
Q 018404          142 MTAWAGFYEICAPK-KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYK  220 (356)
Q Consensus       142 ~tA~~~l~~~~~~~-~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~  220 (356)
                      ..+|.++.+..++. .|++|+|.| .|.+|..+++.++.+|++|++++.++.+.          ..+. ..|+. +.   
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra----------~~A~-~~G~~-v~---  259 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICA----------LQAA-MDGFR-VM---  259 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhh----------HHHH-hcCCE-ec---
Confidence            45566665543444 899999999 89999999999999999999999887775          5554 55653 22   


Q ss_pred             CcccHHHHHHHhCCCCccEEEeCCCc-hHHH-HHHHhhccCCeEEEEcccc
Q 018404          221 EENDLDAALKRCFPEGIDIYFEHVGG-KMLD-AVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       221 ~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~~  269 (356)
                         ++.+.+.     ++|+||+|+|. ..+. ..+..+++++.++.+|...
T Consensus       260 ---~l~eal~-----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        260 ---TMEEAAE-----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             ---CHHHHHh-----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence               2222222     58999999998 4565 6788999999999998743

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.15  E-value=3.4e-05  Score=72.85  Aligned_cols=103  Identities=19%  Similarity=0.223  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecC
Q 018404          142 MTAWAGFYEICA-PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYK  220 (356)
Q Consensus       142 ~tA~~~l~~~~~-~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~  220 (356)
                      ..++.++.+..+ ...|++|+|.| .|.+|+.+++.++.+|++|++++.++.+.          ..+. ..|+. +.   
T Consensus       179 ~s~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~----------~~A~-~~G~~-v~---  242 (406)
T TIGR00936       179 QSTIDGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRA----------LEAA-MDGFR-VM---  242 (406)
T ss_pred             hhHHHHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhH----------HHHH-hcCCE-eC---
Confidence            445555545433 46899999999 99999999999999999999998887775          5555 56652 22   


Q ss_pred             CcccHHHHHHHhCCCCccEEEeCCCc-hHHH-HHHHhhccCCeEEEEccc
Q 018404          221 EENDLDAALKRCFPEGIDIYFEHVGG-KMLD-AVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       221 ~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~  268 (356)
                         ...+.++     +.|++|++.|. ..+. ..+..+++++.++.+|..
T Consensus       243 ---~leeal~-----~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       243 ---TMEEAAK-----IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF  284 (406)
T ss_pred             ---CHHHHHh-----cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence               2222232     47999999999 4555 488899999999999874

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.10  E-value=2.1e-05  Score=69.64  Aligned_cols=85  Identities=19%  Similarity=0.246  Sum_probs=62.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHH-
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALK-  230 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~-  230 (356)
                      ..+.+++|+||++|+|...+..+...|.+++.++|+++++      .+++++++++.+..   ..+|..+. +-.+.+. 
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL------~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~   76 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKL------EALAKELEDKTGVEVEVIPADLSDP-EALERLED   76 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHH------HHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHH
Confidence            4678999999999999999999999999999999999998      55666666455542   22355444 2233333 


Q ss_pred             HhC-CC-CccEEEeCCCc
Q 018404          231 RCF-PE-GIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~-~~-~~d~vid~~g~  246 (356)
                      +.. .+ .+|+.+++.|.
T Consensus        77 ~l~~~~~~IdvLVNNAG~   94 (265)
T COG0300          77 ELKERGGPIDVLVNNAGF   94 (265)
T ss_pred             HHHhcCCcccEEEECCCc
Confidence            222 22 79999999994

>PLN02494 adenosylhomocysteinase

Probab=98.08  E-value=4.9e-05  Score=72.46  Aligned_cols=103  Identities=16%  Similarity=0.188  Sum_probs=78.6

Q ss_pred             HHHHHHHHHHcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecC
Q 018404          142 MTAWAGFYEICAP-KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYK  220 (356)
Q Consensus       142 ~tA~~~l~~~~~~-~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~  220 (356)
                      ...+.++.+..++ -.|++|+|.| .|.+|..+++.++.+|++|+++.+++.+.          ..+. ..|+.. +   
T Consensus       238 qS~~d~i~r~t~i~LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~----------~eA~-~~G~~v-v---  301 (477)
T PLN02494        238 HSLPDGLMRATDVMIAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICA----------LQAL-MEGYQV-L---  301 (477)
T ss_pred             ccHHHHHHHhcCCccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhh----------HHHH-hcCCee-c---
Confidence            3446666555443 5799999999 89999999999999999999999887765          4555 556542 2   


Q ss_pred             CcccHHHHHHHhCCCCccEEEeCCCch-H-HHHHHHhhccCCeEEEEccc
Q 018404          221 EENDLDAALKRCFPEGIDIYFEHVGGK-M-LDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       221 ~~~~~~~~~~~~~~~~~d~vid~~g~~-~-~~~~~~~l~~~G~~v~~g~~  268 (356)
                         .+.+.+.     ..|++|+|.|.. . ....+..|++++.++.+|..
T Consensus       302 ---~leEal~-----~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        302 ---TLEDVVS-----EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             ---cHHHHHh-----hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence               2233333     379999999984 3 37899999999999999973

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.01  E-value=2.5e-05  Score=65.47  Aligned_cols=79  Identities=11%  Similarity=0.206  Sum_probs=58.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--CEEEecCCcccHHHHHHHhCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--DDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      |-+|||.||++|+|++.++-....|-+||...|+++++          +.+++....  +.+.|-.+.+...+.+.++..
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L----------~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERL----------AEAKAENPEIHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHH----------HHHHhcCcchheeeecccchhhHHHHHHHHHh
Confidence            67999999999999999999999999999999999998          877734432  456665554122222233222


Q ss_pred             C--CccEEEeCCC
Q 018404          235 E--GIDIYFEHVG  245 (356)
Q Consensus       235 ~--~~d~vid~~g  245 (356)
                      .  ..++++++.|
T Consensus        75 ~~P~lNvliNNAG   87 (245)
T COG3967          75 EYPNLNVLINNAG   87 (245)
T ss_pred             hCCchheeeeccc
Confidence            2  5799999888

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.96  E-value=0.00017  Score=65.77  Aligned_cols=93  Identities=20%  Similarity=0.309  Sum_probs=72.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .+.+|+|+| .|.+|+.+++.++.+|++|++.+++.++.          +.++ ++|... +.+.   ++.+.+.     
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~----------~~~~-~~G~~~-~~~~---~l~~~l~-----  209 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHL----------ARIT-EMGLSP-FHLS---ELAEEVG-----  209 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHH-HcCCee-ecHH---HHHHHhC-----
Confidence            589999999 79999999999999999999999998876          7777 777643 2211   2222222     


Q ss_pred             CccEEEeCCCch-HHHHHHHhhccCCeEEEEcccc
Q 018404          236 GIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       236 ~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      .+|+||+|+... .....++.+++++.++.++...
T Consensus       210 ~aDiVI~t~p~~~i~~~~l~~~~~g~vIIDla~~p  244 (296)
T PRK08306        210 KIDIIFNTIPALVLTKEVLSKMPPEALIIDLASKP  244 (296)
T ss_pred             CCCEEEECCChhhhhHHHHHcCCCCcEEEEEccCC
Confidence            489999999874 3457778899999999998744

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.94  E-value=0.00012  Score=64.34  Aligned_cols=104  Identities=20%  Similarity=0.251  Sum_probs=69.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc---CCCEEE--ecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF---GFDDAF--NYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~vv--~~~~~~~~~~~~~  230 (356)
                      .+++|+|+||+|++|..+++.+...|++|+.+++++++.          +.+..+.   +....+  |..+.+.+.+.+.
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   73 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL----------KRMKKTLSKYGNIHYVVGDVSSTESARNVIE   73 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHHHhcCCeEEEECCCCCHHHHHHHHH
Confidence            367999999999999999999999999999999988766          4432122   221222  3333223333333


Q ss_pred             HhCC--CCccEEEeCCCch------------------------HHHHHHHhhccCCeEEEEcccc
Q 018404          231 RCFP--EGIDIYFEHVGGK------------------------MLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      +...  +++|.++.+.|..                        .++..+++++++|+++.++...
T Consensus        74 ~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         74 KAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             HHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            3211  3689999988741                        1345566777789999988754

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.92  E-value=0.00011  Score=65.77  Aligned_cols=109  Identities=18%  Similarity=0.301  Sum_probs=74.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E----EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A----FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v----v~~~~~~~~~~~~~  230 (356)
                      .|..|+|+||++|+|.+++.-.-..|++++.+++...++      +..+++++ +.+... +    +|-.+..+....+.
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl------~~v~~~l~-~~~~~~~v~~~~~Dvs~~~~~~~~~~   83 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRL------ERVAEELR-KLGSLEKVLVLQLDVSDEESVKKFVE   83 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhH------HHHHHHHH-HhCCcCccEEEeCccCCHHHHHHHHH
Confidence            478999999999999999998889999999999998887      34444555 444322 2    23333223333332


Q ss_pred             HhC--CCCccEEEeCCCch--------------------------HHHHHHHhhccC--CeEEEEcccccc
Q 018404          231 RCF--PEGIDIYFEHVGGK--------------------------MLDAVLLNMRLH--GRIAACGMISQY  271 (356)
Q Consensus       231 ~~~--~~~~d~vid~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~  271 (356)
                      +..  -|++|+.++..|-.                          ..+.++..|++.  |+|+.+++..+.
T Consensus        84 ~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~  154 (282)
T KOG1205|consen   84 WAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK  154 (282)
T ss_pred             HHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence            221  24899999988821                          225666777665  999999987663

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.92  E-value=0.00023  Score=63.48  Aligned_cols=143  Identities=16%  Similarity=0.240  Sum_probs=90.2

Q ss_pred             CCCCCCCCEEEEccccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHH
Q 018404           93 HPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQL  172 (356)
Q Consensus        93 v~~~~~Gd~V~~~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~  172 (356)
                      ...+++||+++...+|.+|.. +... ++++ +++  +++..+..+.+ ..+...+..  .+.++++||-.| +|. |..
T Consensus        64 ~~p~~~g~~~~i~p~~~~~~~-~~~~-~i~i-~p~--~afgtg~h~tt-~~~l~~l~~--~~~~~~~VLDiG-cGs-G~l  133 (250)
T PRK00517         64 FHPIRIGDRLWIVPSWEDPPD-PDEI-NIEL-DPG--MAFGTGTHPTT-RLCLEALEK--LVLPGKTVLDVG-CGS-GIL  133 (250)
T ss_pred             CCCEEEcCCEEEECCCcCCCC-CCeE-EEEE-CCC--CccCCCCCHHH-HHHHHHHHh--hcCCCCEEEEeC-CcH-HHH
Confidence            345778999888888988855 5566 8889 666  44333322222 122333322  256889999999 665 887


Q ss_pred             HHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCch-
Q 018404          173 VGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK-  247 (356)
Q Consensus       173 ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-  247 (356)
                      ++.+++ .|+ +|++++.++...          +.+++   ..+....+..... +          ..+|+|+...... 
T Consensus       134 ~i~~~~-~g~~~v~giDis~~~l----------~~A~~n~~~~~~~~~~~~~~~-~----------~~fD~Vvani~~~~  191 (250)
T PRK00517        134 AIAAAK-LGAKKVLAVDIDPQAV----------EAARENAELNGVELNVYLPQG-D----------LKADVIVANILANP  191 (250)
T ss_pred             HHHHHH-cCCCeEEEEECCHHHH----------HHHHHHHHHcCCCceEEEccC-C----------CCcCEEEEcCcHHH
Confidence            776554 566 699999998876          44442   2233111111110 0          0489998766543 


Q ss_pred             ---HHHHHHHhhccCCeEEEEcc
Q 018404          248 ---MLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       248 ---~~~~~~~~l~~~G~~v~~g~  267 (356)
                         .+..+.+.|+++|+++..|.
T Consensus       192 ~~~l~~~~~~~LkpgG~lilsgi  214 (250)
T PRK00517        192 LLELAPDLARLLKPGGRLILSGI  214 (250)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEEC
Confidence               45678889999999998875

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.89  E-value=0.00019  Score=64.94  Aligned_cols=104  Identities=21%  Similarity=0.319  Sum_probs=71.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHH---H
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALK---R  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~---~  231 (356)
                      .+.+|+|+||+|++|.++++.+...|++|++++++.++.          +.+. +.+... .+|..+..++...+.   +
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~----------~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~   71 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV----------AALE-AEGLEAFQLDYAEPESIAALVAQVLE   71 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHH-HCCceEEEccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999988999999999998877          6666 555532 245554323333333   3


Q ss_pred             hCCCCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          232 CFPEGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      ..++.+|++|.+.|..                          ..+.++..+..  .|+++.+++..+
T Consensus        72 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~  138 (277)
T PRK05993         72 LSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG  138 (277)
T ss_pred             HcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh
Confidence            3335799999988731                          02345555544  478999887544

>PRK08324 short chain dehydrogenase; Validated

Probab=97.89  E-value=9.5e-05  Score=75.53  Aligned_cols=139  Identities=19%  Similarity=0.224  Sum_probs=87.7

Q ss_pred             cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHH--HcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE
Q 018404          106 TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYE--ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY  183 (356)
Q Consensus       106 g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~--~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~  183 (356)
                      .++++|..+++.. ++.+  +.+++.  .+.           +..  .....+|++|+|+||+|++|.++++.+...|++
T Consensus       385 ~~~~~~~~l~~~~-~f~i--~~~~~e--~a~-----------l~~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~  448 (681)
T PRK08324        385 EAVGRYEPLSEQE-AFDI--EYWSLE--QAK-----------LQRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGAC  448 (681)
T ss_pred             hhcCCccCCChhh-hcce--eeehhh--hhh-----------hhcCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCE
Confidence            3667888777776 6665  332222  221           111  122346789999999999999999999999999


Q ss_pred             EEEEeCCcchhccccchhHHHHHHHhhcCC-----CEEEecCCcccHHHHHHHhC--CCCccEEEeCCCc----------
Q 018404          184 VVGSAGSREKVWLIPMQSQLVELLKNKFGF-----DDAFNYKEENDLDAALKRCF--PEGIDIYFEHVGG----------  246 (356)
Q Consensus       184 Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~vv~~~~~~~~~~~~~~~~--~~~~d~vid~~g~----------  246 (356)
                      |++++++.++.          +.+.+.++.     ...+|..+.+.+...+.+..  .+++|++|++.|.          
T Consensus       449 Vvl~~r~~~~~----------~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~  518 (681)
T PRK08324        449 VVLADLDEEAA----------EAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETS  518 (681)
T ss_pred             EEEEeCCHHHH----------HHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCC
Confidence            99999988775          444323332     12234444323333333322  2379999999992          


Q ss_pred             ----------------hHHHHHHHhhcc---CCeEEEEccccc
Q 018404          247 ----------------KMLDAVLLNMRL---HGRIAACGMISQ  270 (356)
Q Consensus       247 ----------------~~~~~~~~~l~~---~G~~v~~g~~~~  270 (356)
                                      ..++.+++.+++   +|+++.+++...
T Consensus       519 ~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~  561 (681)
T PRK08324        519 DEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA  561 (681)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence                            123455666666   689999987543

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.89  E-value=0.00016  Score=65.15  Aligned_cols=77  Identities=21%  Similarity=0.348  Sum_probs=56.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCC--
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFP--  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~--  234 (356)
                      .+++|+||+|++|..+++.+...|++|++++++.++.          +.+. ..+...+ +|..+...+.+.+.+...  
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~----------~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   70 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV----------EALA-AAGFTAVQLDVNDGAALARLAEELEAEH   70 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            4799999999999999999999999999999987776          6555 4454322 465553234433443321  


Q ss_pred             CCccEEEeCCC
Q 018404          235 EGIDIYFEHVG  245 (356)
Q Consensus       235 ~~~d~vid~~g  245 (356)
                      +++|++|++.|
T Consensus        71 ~~id~vi~~ag   81 (274)
T PRK05693         71 GGLDVLINNAG   81 (274)
T ss_pred             CCCCEEEECCC
Confidence            37999999998

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.86  E-value=0.00015  Score=68.36  Aligned_cols=100  Identities=17%  Similarity=0.227  Sum_probs=71.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      +.+|+|.| .|.+|+.+++.++.+|++|++++++.++.          +.+...++......+.+.+.+.+.+.     .
T Consensus       167 ~~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~----------~~l~~~~g~~v~~~~~~~~~l~~~l~-----~  230 (370)
T TIGR00518       167 PGDVTIIG-GGVVGTNAAKMANGLGATVTILDINIDRL----------RQLDAEFGGRIHTRYSNAYEIEDAVK-----R  230 (370)
T ss_pred             CceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECCHHHH----------HHHHHhcCceeEeccCCHHHHHHHHc-----c
Confidence            45699998 79999999999999999999999988877          66653555432222222112333332     5


Q ss_pred             ccEEEeCC---Cc--h--HHHHHHHhhccCCeEEEEccccccC
Q 018404          237 IDIYFEHV---GG--K--MLDAVLLNMRLHGRIAACGMISQYN  272 (356)
Q Consensus       237 ~d~vid~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~  272 (356)
                      +|++|+|+   |.  .  .....++.+++++.++.++...+.+
T Consensus       231 aDvVI~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~  273 (370)
T TIGR00518       231 ADLLIGAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGC  273 (370)
T ss_pred             CCEEEEccccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCC
Confidence            89999998   33  2  2378888999999999998754443

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK12742 oxidoreductase; Provisional

Probab=97.86  E-value=0.00017  Score=63.35  Aligned_cols=103  Identities=17%  Similarity=0.193  Sum_probs=67.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-cchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-REKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~  233 (356)
                      ++++|+|+||+|++|.++++.+...|++|+.+.++ .++.          +.+..+++...+ .|..+...+.+.+.+. 
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~----------~~l~~~~~~~~~~~D~~~~~~~~~~~~~~-   73 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAA----------ERLAQETGATAVQTDSADRDAVIDVVRKS-   73 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHH----------HHHHHHhCCeEEecCCCCHHHHHHHHHHh-
Confidence            46799999999999999999999999999887653 3443          344325555322 3443321333334332 


Q ss_pred             CCCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          234 PEGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       234 ~~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                       +++|++|++.|..                          ....+++.++++|+++.++....
T Consensus        74 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  135 (237)
T PRK12742         74 -GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG  135 (237)
T ss_pred             -CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence             3689999998741                          01344455667899999887543

>PRK06182 short chain dehydrogenase; Validated

Probab=97.81  E-value=0.00021  Score=64.43  Aligned_cols=80  Identities=23%  Similarity=0.336  Sum_probs=57.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhC-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCF-  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~-  233 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++.+++          +.+. ..+.. ...|..+.+++...+.+.. 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l----------~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~   70 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM----------EDLA-SLGVHPLSLDVTDEASIKAAVDTIIA   70 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-hCCCeEEEeeCCCHHHHHHHHHHHHH
Confidence            367899999999999999999988999999999988776          5555 44543 2345555423433344332 


Q ss_pred             -CCCccEEEeCCCc
Q 018404          234 -PEGIDIYFEHVGG  246 (356)
Q Consensus       234 -~~~~d~vid~~g~  246 (356)
                       .+++|++|.+.|.
T Consensus        71 ~~~~id~li~~ag~   84 (273)
T PRK06182         71 EEGRIDVLVNNAGY   84 (273)
T ss_pred             hcCCCCEEEECCCc
Confidence             2379999999984

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00034  Score=65.19  Aligned_cols=108  Identities=21%  Similarity=0.195  Sum_probs=70.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+|+|+||+|++|.++++.+...|++|+.+++++++.      +++.+.++ +.|...   ..|..+.+++.+.+.+.
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l------~~~~~~l~-~~g~~~~~v~~Dv~d~~~v~~~~~~~   79 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGL------EALAAEIR-AAGGEALAVVADVADAEAVQAAADRA   79 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-HcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999987765      22223344 445432   23444432333333322


Q ss_pred             C--CCCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          233 F--PEGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       233 ~--~~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      .  -+++|++|++.|..                          ..+.+++.+.+  .|++|.++....
T Consensus        80 ~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~  147 (334)
T PRK07109         80 EEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA  147 (334)
T ss_pred             HHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence            1  13799999998841                          11234555544  589999987544

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00026  Score=64.71  Aligned_cols=81  Identities=16%  Similarity=0.212  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--C-EE--EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--D-DA--FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~-~v--v~~~~~~~~~~~~~  230 (356)
                      +|.+++|+||+|++|.++++.+...|++|++++++.+++          +.+.++++.  . ..  .|..+..+..+.+.
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l----------~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~   77 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAEL----------AALAAELGGDDRVLTVVADVTDLAAMQAAAE   77 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhcCCCcEEEEEecCCCHHHHHHHHH
Confidence            478999999999999999999999999999999988776          444434542  1 11  44444323333333


Q ss_pred             HhCC--CCccEEEeCCCc
Q 018404          231 RCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~  246 (356)
                      +...  +++|++|++.|.
T Consensus        78 ~~~~~~g~id~vI~nAG~   95 (296)
T PRK05872         78 EAVERFGGIDVVVANAGI   95 (296)
T ss_pred             HHHHHcCCCCEEEECCCc
Confidence            3221  369999999984

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.74  E-value=0.00032  Score=67.19  Aligned_cols=91  Identities=18%  Similarity=0.209  Sum_probs=70.5

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      .-.|++|+|.| .|.+|..+++.++.+|++|+++.+++.+.          ..+. ..|+.. .      ++.+.++   
T Consensus       251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a----------~~A~-~~G~~~-~------~leell~---  308 (476)
T PTZ00075        251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICA----------LQAA-MEGYQV-V------TLEDVVE---  308 (476)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhH----------HHHH-hcCcee-c------cHHHHHh---
Confidence            45789999999 89999999999999999999998776664          4444 445431 1      3333333   


Q ss_pred             CCCccEEEeCCCc-hHH-HHHHHhhccCCeEEEEccc
Q 018404          234 PEGIDIYFEHVGG-KML-DAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       234 ~~~~d~vid~~g~-~~~-~~~~~~l~~~G~~v~~g~~  268 (356)
                        ..|+|+.+.|. ..+ ...+..|++++.++.+|..
T Consensus       309 --~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        309 --TADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             --cCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence              48999999998 445 4899999999999999874

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.00042  Score=62.07  Aligned_cols=104  Identities=16%  Similarity=0.166  Sum_probs=68.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|.++++.+...|++|+.++++.++.          +.+..+++..   ...|..+..++.+.+.+.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNG----------AAVAASLGERARFIATDITDDAAIERAVATV   74 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhCCeeEEEEecCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999987765          4444244431   123444432333333332


Q ss_pred             CC--CCccEEEeCCCch-------------------------HHHHHHHhh-ccCCeEEEEcccc
Q 018404          233 FP--EGIDIYFEHVGGK-------------------------MLDAVLLNM-RLHGRIAACGMIS  269 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~-------------------------~~~~~~~~l-~~~G~~v~~g~~~  269 (356)
                      ..  +.+|++|.+.|..                         ..+.++..+ +++|+++.++...
T Consensus        75 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~  139 (261)
T PRK08265         75 VARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS  139 (261)
T ss_pred             HHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence            21  3689999988731                         112333444 5679999988754

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.70  E-value=0.00028  Score=65.01  Aligned_cols=107  Identities=20%  Similarity=0.196  Sum_probs=72.3

Q ss_pred             ceeecCCCCCccchhcccCcchHHHHHHHHHHcCC---CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhc
Q 018404          120 LFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAP---KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVW  195 (356)
Q Consensus       120 l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~---~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~  195 (356)
                      .+++ |+.  +..+.+....+..+++.++......   .++.+|+|.| +|.+|..+++.++..|+ +|+++.++.++. 
T Consensus       141 a~~~-~k~--vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra-  215 (311)
T cd05213         141 AIKV-GKR--VRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERA-  215 (311)
T ss_pred             HHHH-HHH--HhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHH-
Confidence            6666 666  4434444445666777776543222   3689999999 79999999999998875 888888888775 


Q ss_pred             cccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCchHH
Q 018404          196 LIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKML  249 (356)
Q Consensus       196 ~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  249 (356)
                               +.+.+++|.. +++..   ++.+.+.     .+|+||.|++.+..
T Consensus       216 ---------~~la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~~  251 (311)
T cd05213         216 ---------EELAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPHY  251 (311)
T ss_pred             ---------HHHHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCch
Confidence                     4444378863 33321   2333333     48999999998543

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.63  E-value=0.00042  Score=62.19  Aligned_cols=83  Identities=19%  Similarity=0.231  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|..+++.+...|++|+.++++.++.      .++.+.+. +.+.. .  .+|..+..++...+++.
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~i~~~~~~~   80 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKV------DAAVAQLQ-QAGPEGLGVSADVRDYAAVEAAFAQI   80 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-HhCCceEEEECCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999887664      11112233 22322 1  23444432344444443


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        81 ~~~~~~iD~vi~~ag   95 (264)
T PRK07576         81 ADEFGPIDVLVSGAA   95 (264)
T ss_pred             HHHcCCCCEEEECCC
Confidence            22  36899998876

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.00072  Score=60.89  Aligned_cols=80  Identities=13%  Similarity=0.193  Sum_probs=55.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC-CC-EEEecCCcccHHHHHHHhCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG-FD-DAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~~~~~~~  234 (356)
                      +.+++|+||+|++|..+++.+...|++|+++++++++.          +.+.+.++ .. ...|..+.+++.+.+.+...
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALA----------KETAAELGLVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhccceEEEccCCCHHHHHHHHHHHHH
Confidence            57999999999999999998888999999999887776          44432444 22 22354443233333333321


Q ss_pred             --CCccEEEeCCCc
Q 018404          235 --EGIDIYFEHVGG  246 (356)
Q Consensus       235 --~~~d~vid~~g~  246 (356)
                        +++|++|.+.|.
T Consensus        75 ~~~~id~li~~ag~   88 (273)
T PRK07825         75 DLGPIDVLVNNAGV   88 (273)
T ss_pred             HcCCCCEEEECCCc
Confidence              379999999883

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.62  E-value=0.00073  Score=57.49  Aligned_cols=102  Identities=19%  Similarity=0.226  Sum_probs=73.7

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccH
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDL  225 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~  225 (356)
                      ++ ....+++|++||=+|  +|.|+.++-+++..+ +|+.+.+.++-.      +.+++.++ .+|...| +...+.   
T Consensus        64 m~-~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~------~~A~~~L~-~lg~~nV~v~~gDG---  129 (209)
T COG2518          64 ML-QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELA------EQARRNLE-TLGYENVTVRHGDG---  129 (209)
T ss_pred             HH-HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHH------HHHHHHHH-HcCCCceEEEECCc---
Confidence            44 567899999999999  577999999999998 999999876643      23335566 7887433 222221   


Q ss_pred             HHHHHHhCCC-CccEEEeCCCchHH-HHHHHhhccCCeEEEE
Q 018404          226 DAALKRCFPE-GIDIYFEHVGGKML-DAVLLNMRLHGRIAAC  265 (356)
Q Consensus       226 ~~~~~~~~~~-~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~  265 (356)
                         .+.+... +||.|+-+.+.+.+ ...++.|+++|+++..
T Consensus       130 ---~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P  168 (209)
T COG2518         130 ---SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP  168 (209)
T ss_pred             ---ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence               2222233 89999988887555 6889999999999864

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.0012  Score=59.06  Aligned_cols=85  Identities=19%  Similarity=0.229  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-C---EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-D---DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~---~vv~~~~~~~~~~~~~~  231 (356)
                      .+.+++|+||++++|.+.++.+...|++|+.++++.++.      +++.+.+.+..+. .   ..+|..+.+++.+.+.+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERL------ASAEARLREKFPGARLLAARCDVLDEADVAAFAAA   80 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH------HHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999987765      1222333312221 1   12344443233333333


Q ss_pred             hC--CCCccEEEeCCCc
Q 018404          232 CF--PEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~--~~~~d~vid~~g~  246 (356)
                      ..  -+++|++|.+.|.
T Consensus        81 ~~~~~g~id~li~~Ag~   97 (265)
T PRK07062         81 VEARFGGVDMLVNNAGQ   97 (265)
T ss_pred             HHHhcCCCCEEEECCCC
Confidence            22  1369999999983

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.0012  Score=59.22  Aligned_cols=83  Identities=16%  Similarity=0.215  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ ..+.. .  .+|..+...+.+.+.+.
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQL------DEVAEQIR-AAGRRAHVVAADLAHPEATAGLAGQA   81 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999987665      12222333 22322 1  23444432233333332


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        82 ~~~~~~id~vi~~Ag   96 (263)
T PRK07814         82 VEAFGRLDIVVNNVG   96 (263)
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  36999999887

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.00091  Score=60.01  Aligned_cols=109  Identities=22%  Similarity=0.299  Sum_probs=68.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      +|.+++|+||++++|.++++.+...|++|+.++++.++.      +++.+.+++..+..   ...|..+..+....+.+.
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   80 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENL------KKAREKIKSESNVDVSYIVADLTKREDLERTVKEL   80 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999887765      12222232111321   223444432333333332


Q ss_pred             C-CCCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          233 F-PEGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       233 ~-~~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      . .+++|+++.+.|..                          ..+.+++.|..  .|++|.++....
T Consensus        81 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~  147 (263)
T PRK08339         81 KNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI  147 (263)
T ss_pred             HhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence            2 14799999998741                          12444555543  489999887543

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.00045  Score=64.18  Aligned_cols=83  Identities=20%  Similarity=0.357  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      ++++|+|+||+|++|.++++.+...|++|+.++++++++      +++.+.++ +.|...   ..|..+.+++.+.+.+.
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l------~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~~~   78 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEAL------QAVAEECR-ALGAEVLVVPTDVTDADQVKALATQA   78 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999988776      22333444 455432   23444432222222222


Q ss_pred             --CCCCccEEEeCCC
Q 018404          233 --FPEGIDIYFEHVG  245 (356)
Q Consensus       233 --~~~~~d~vid~~g  245 (356)
                        ..+++|++|++.|
T Consensus        79 ~~~~g~iD~lVnnAG   93 (330)
T PRK06139         79 ASFGGRIDVWVNNVG   93 (330)
T ss_pred             HHhcCCCCEEEECCC
Confidence              1247999999998

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.0045  Score=55.16  Aligned_cols=85  Identities=14%  Similarity=0.139  Sum_probs=54.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALK  230 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~  230 (356)
                      .++.+++|.||+|++|..+++.+...|++ |++++++.+..      .+..+.++ +.+..   ..+|..+.+.+.+.+.
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~   76 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG------EAQAAELE-ALGAKAVFVQADLSDVEDCRRVVA   76 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHH------HHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHH
Confidence            35689999999999999999999999998 99998876654      11112333 34432   1234444323333333


Q ss_pred             HhCC--CCccEEEeCCCc
Q 018404          231 RCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~  246 (356)
                      ....  +++|.+|.+.|.
T Consensus        77 ~~~~~~g~id~li~~ag~   94 (260)
T PRK06198         77 AADEAFGRLDALVNAAGL   94 (260)
T ss_pred             HHHHHhCCCCEEEECCCc
Confidence            2211  369999999984

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.0014  Score=57.93  Aligned_cols=107  Identities=17%  Similarity=0.181  Sum_probs=65.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|..++..+...|++|+++.++.+..     .+++.+.++ ..+..   ...|..+.+++...+.+.
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~-----~~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPR-----ANKVVAEIE-AAGGRASAVGADLTDEESVAALMDTA   78 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHh-----HHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999998888999999988765321     012223333 33332   123444432333333332


Q ss_pred             CC--CCccEEEeCCCch--------------------HHHHHHHhhccCCeEEEEccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------MLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------~~~~~~~~l~~~G~~v~~g~~  268 (356)
                      ..  +++|+++.+.|..                    .++.+.+.+..+|+++.++..
T Consensus        79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~  136 (248)
T PRK07806         79 REEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH  136 (248)
T ss_pred             HHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence            22  2689999887641                    234455555667899988763

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.54  E-value=0.00066  Score=60.77  Aligned_cols=85  Identities=18%  Similarity=0.283  Sum_probs=63.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC---CEEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF---DDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~~  232 (356)
                      -|+|.+|+||+.|+|.+-+.=+...|.+|+.+.|+.+++      ++.+.++.++.+.   ..++|+.+.+..-+.+++.
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL------~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~  121 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKL------EAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEK  121 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHH
Confidence            468999999999999876644444999999999999998      6666666656664   3567887752224455555


Q ss_pred             CCC-CccEEEeCCCc
Q 018404          233 FPE-GIDIYFEHVGG  246 (356)
Q Consensus       233 ~~~-~~d~vid~~g~  246 (356)
                      +.+ .+-++++++|-
T Consensus       122 l~~~~VgILVNNvG~  136 (312)
T KOG1014|consen  122 LAGLDVGILVNNVGM  136 (312)
T ss_pred             hcCCceEEEEecccc
Confidence            555 88999999994

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.0012  Score=58.36  Aligned_cols=84  Identities=17%  Similarity=0.186  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|..++..+...|++|+++++++++.      .++.+.++ ..+..   ...|..+.+++...+.+.
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   78 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEA------RELAAALE-AAGGRAHAIAADLADPASVQRFFDAA   78 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999998887765      11122233 33322   123444431222222222


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        79 ~~~~~~id~vi~~ag~   94 (250)
T PRK12939         79 AAALGGLDGLVNNAGI   94 (250)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            11  379999999984

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.0015  Score=58.74  Aligned_cols=81  Identities=14%  Similarity=0.181  Sum_probs=52.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC----EEEecCCcccHHHHHHHhCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD----DAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~~~~~~  234 (356)
                      +++|+||+|++|..+++.+...|++|+.+.++.+..      +++.+.++ ..+..    ...|..+.+.+.+.+.+...
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGL------AQTVADAR-ALGGTVPEHRALDISDYDAVAAFAADIHA   74 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCCcceEEEeeCCCHHHHHHHHHHHHH
Confidence            689999999999999999889999999998876654      11122333 33332    12455543233333333221


Q ss_pred             --CCccEEEeCCCc
Q 018404          235 --EGIDIYFEHVGG  246 (356)
Q Consensus       235 --~~~d~vid~~g~  246 (356)
                        +++|++|.+.|.
T Consensus        75 ~~~~id~lv~~ag~   88 (272)
T PRK07832         75 AHGSMDVVMNIAGI   88 (272)
T ss_pred             hcCCCCEEEECCCC
Confidence              368999999984

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.52  E-value=0.00041  Score=55.57  Aligned_cols=93  Identities=20%  Similarity=0.247  Sum_probs=62.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|.| +|++|.+++..+..+|+ +|+++.|+.++.          +.+.+.++..  ..+++.   ++.+.+.  
T Consensus        11 ~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra----------~~l~~~~~~~~~~~~~~~---~~~~~~~--   74 (135)
T PF01488_consen   11 KGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERA----------EALAEEFGGVNIEAIPLE---DLEEALQ--   74 (135)
T ss_dssp             TTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHH----------HHHHHHHTGCSEEEEEGG---GHCHHHH--
T ss_pred             CCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHH----------HHHHHHcCccccceeeHH---HHHHHHh--
Confidence            478999999 79999999999999999 599999999887          6665466432  344443   2333333  


Q ss_pred             CCCCccEEEeCCCchHHHHHHHhhccC----CeEEEEcc
Q 018404          233 FPEGIDIYFEHVGGKMLDAVLLNMRLH----GRIAACGM  267 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~~~~~~~~l~~~----G~~v~~g~  267 (356)
                         .+|+||.|++.....-.-..+.+.    +.++.++.
T Consensus        75 ---~~DivI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~  110 (135)
T PF01488_consen   75 ---EADIVINATPSGMPIITEEMLKKASKKLRLVIDLAV  110 (135)
T ss_dssp             ---TESEEEE-SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred             ---hCCeEEEecCCCCcccCHHHHHHHHhhhhceecccc
Confidence               489999999874322112223333    46677764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.52  E-value=0.0015  Score=58.37  Aligned_cols=82  Identities=16%  Similarity=0.280  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--CEEEecCCcccHH---HHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--DDAFNYKEENDLD---AALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~---~~~~  230 (356)
                      .|+.|||+||++|+|.+.++=...+|++++..+.+.+..      .+-.+.++ +.|-  ..+.|-.+.++..   ++++
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~------~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGN------EETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccch------HHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHH
Confidence            589999999999999988887788899998888877654      22224444 4442  3556655532333   3333


Q ss_pred             HhCCCCccEEEeCCC
Q 018404          231 RCFPEGIDIYFEHVG  245 (356)
Q Consensus       231 ~~~~~~~d~vid~~g  245 (356)
                      +-. |.+|++++.+|
T Consensus       110 ~e~-G~V~ILVNNAG  123 (300)
T KOG1201|consen  110 KEV-GDVDILVNNAG  123 (300)
T ss_pred             Hhc-CCceEEEeccc
Confidence            322 37999999998

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.50  E-value=0.0011  Score=64.26  Aligned_cols=82  Identities=18%  Similarity=0.218  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhC-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCF-  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~-  233 (356)
                      ++.+++|+||+|++|..+++.+...|++|++++++....       .+ +.+.++.+.. ..+|..+.......+.... 
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~-------~l-~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  280 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGE-------AL-AAVANRVGGTALALDITAPDAPARIAEHLAE  280 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHH-------HH-HHHHHHcCCeEEEEeCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999988753321       11 2232255543 2345554312222232221 


Q ss_pred             -CCCccEEEeCCC
Q 018404          234 -PEGIDIYFEHVG  245 (356)
Q Consensus       234 -~~~~d~vid~~g  245 (356)
                       .+++|++|.+.|
T Consensus       281 ~~g~id~vi~~AG  293 (450)
T PRK08261        281 RHGGLDIVVHNAG  293 (450)
T ss_pred             hCCCCCEEEECCC
Confidence             236999999998

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.0012  Score=58.92  Aligned_cols=82  Identities=11%  Similarity=0.185  Sum_probs=55.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC----EEEecCCcccHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD----DAFNYKEENDLDAALK  230 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~~  230 (356)
                      .++.++||+||+|++|..+++.+...|++|+.+.++.+..          +.+.+..+-.    ...|..+...+.+.+.
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   78 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAAL----------AATAARLPGAKVTATVADVADPAQVERVFD   78 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHHhcCceEEEEccCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999887665          4443222211    2234444323333333


Q ss_pred             HhCC--CCccEEEeCCCc
Q 018404          231 RCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~  246 (356)
                      +...  +++|+||.+.|.
T Consensus        79 ~~~~~~~~~d~vi~~ag~   96 (264)
T PRK12829         79 TAVERFGGLDVLVNNAGI   96 (264)
T ss_pred             HHHHHhCCCCEEEECCCC
Confidence            2211  369999998874

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.0014  Score=57.95  Aligned_cols=81  Identities=12%  Similarity=0.126  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|.||+|++|...++.+...|++|++++++.+..          +.+.++++... .  .|..+..+....+.+.
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASL----------EAARAELGESALVIRADAGDVAAQKALAQAL   74 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHH----------HHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999886665          44443555421 1  2333321222222222


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|++|.+.|.
T Consensus        75 ~~~~~~id~vi~~ag~   90 (249)
T PRK06500         75 AEAFGRLDAVFINAGV   90 (249)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            1  1368999998873

>PRK06128 oxidoreductase; Provisional

Probab=97.48  E-value=0.0015  Score=59.91  Aligned_cols=110  Identities=17%  Similarity=0.231  Sum_probs=67.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.+++..+...|++|+.+.++.+..    ..++..+.++ ..+...   ..|..+.....+.+.+.
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~  128 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQ----DAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERA  128 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchH----HHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999998887654321    0112223444 444321   12433321233333332


Q ss_pred             CC--CCccEEEeCCCch---------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK---------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ..  +++|++|.+.|..                           .++.+++.+.++|+++.++....
T Consensus       129 ~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~  195 (300)
T PRK06128        129 VKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS  195 (300)
T ss_pred             HHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence            21  3699999988731                           12334455667889998887544

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.0011  Score=58.17  Aligned_cols=81  Identities=17%  Similarity=0.263  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC---CCEE--EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG---FDDA--FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~v--v~~~~~~~~~~~~~  230 (356)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.          +.+.+++.   --+.  .|..+..++.+.+.
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~----------~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~   74 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKEL----------EEAAAELNNKGNVLGLAADVRDEADVQRAVD   74 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHH----------HHHHHHHhccCcEEEEEccCCCHHHHHHHHH
Confidence            468999999999999999988888899999999887665          33322332   1112  23333323444444


Q ss_pred             HhCC--CCccEEEeCCCc
Q 018404          231 RCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~  246 (356)
                      +...  +++|++|.+.|.
T Consensus        75 ~~~~~~~~~d~vi~~ag~   92 (237)
T PRK07326         75 AIVAAFGGLDVLIANAGV   92 (237)
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            3321  369999998874

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.45  E-value=0.0017  Score=63.76  Aligned_cols=44  Identities=20%  Similarity=0.243  Sum_probs=39.1

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ..+.+.|.+|+|+||+|++|..+++.+...|++|++++++.++.
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl  117 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRA  117 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            34567889999999999999999999988999999999988775

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.44  E-value=0.0012  Score=58.38  Aligned_cols=81  Identities=22%  Similarity=0.272  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC--CC---EEEecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG--FD---DAFNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~---~vv~~~~~~~~~~~~~  230 (356)
                      ++.+++|+||+|++|..+++.+...|++|++++++.++.          +.+...+.  ..   ...|..+.+++...+.
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   73 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAA----------ERVAAEILAGGRAIAVAADVSDEADVEAAVA   73 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            356999999999999999999888999999999998765          33332322  11   1223333323333333


Q ss_pred             HhC--CCCccEEEeCCCc
Q 018404          231 RCF--PEGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~--~~~~d~vid~~g~  246 (356)
                      +..  .+.+|++|.+.|.
T Consensus        74 ~~~~~~~~~d~vi~~ag~   91 (251)
T PRK07231         74 AALERFGSVDILVNNAGT   91 (251)
T ss_pred             HHHHHhCCCCEEEECCCC
Confidence            321  1368999998874

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.43  E-value=0.00078  Score=64.78  Aligned_cols=148  Identities=21%  Similarity=0.181  Sum_probs=86.7

Q ss_pred             CCCCCcceecEEEEEecCCCCCCCCCCEEE-Ec-----------cccceeEeecCCCcceeecCCCCCccchhcccCcch
Q 018404           74 FTPGSPIEGFGVAKVVDSGHPEFKKGDLVW-GT-----------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPG  141 (356)
Q Consensus        74 ~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~-~~-----------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~  141 (356)
                      ..-|||.  ++-+.+|++++.+.-.|..-+ +.           |+......--=.. .+++ |..  +..+.+....+.
T Consensus        90 ~~~g~ea--~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~-a~~~-~k~--v~~~t~i~~~~~  163 (423)
T PRK00045         90 VHEGEEA--VRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQK-AFSV-AKR--VRTETGIGAGAV  163 (423)
T ss_pred             hcCCHHH--HHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHH-HHHH-Hhh--HhhhcCCCCCCc
Confidence            3458885  777778888877644554322 11           1111000000001 2444 443  222222333355


Q ss_pred             HHHHHHHHHHcC---CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE
Q 018404          142 MTAWAGFYEICA---PKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF  217 (356)
Q Consensus       142 ~tA~~~l~~~~~---~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv  217 (356)
                      +++++++.....   -.++.+|+|.| +|.+|.++++.++..|+ +|+++.++.++.          +.+.+++|.. ++
T Consensus       164 Sv~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra----------~~la~~~g~~-~~  231 (423)
T PRK00045        164 SVASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERA----------EELAEEFGGE-AI  231 (423)
T ss_pred             CHHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHH----------HHHHHHcCCc-Ee
Confidence            666777644322   25678999999 79999999999999998 899999988876          4343377753 33


Q ss_pred             ecCCcccHHHHHHHhCCCCccEEEeCCCch
Q 018404          218 NYKEENDLDAALKRCFPEGIDIYFEHVGGK  247 (356)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  247 (356)
                      +..   +..+.+.     ++|+||+|+|.+
T Consensus       232 ~~~---~~~~~l~-----~aDvVI~aT~s~  253 (423)
T PRK00045        232 PLD---ELPEALA-----EADIVISSTGAP  253 (423)
T ss_pred             eHH---HHHHHhc-----cCCEEEECCCCC
Confidence            321   2222222     589999999973

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0018  Score=58.51  Aligned_cols=81  Identities=17%  Similarity=0.180  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.+.++.+...|++|++++++.++.          +.+....+..   ...|..+.+.+...+.+.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~----------~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~   72 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAAR----------ADFEALHPDRALARLLDVTDFDAIDAVVADA   72 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHH----------HHHHhhcCCCeeEEEccCCCHHHHHHHHHHH
Confidence            357899999999999999999888999999999988776          5554222221   123444432333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|+++.+.|.
T Consensus        73 ~~~~~~~d~vv~~ag~   88 (277)
T PRK06180         73 EATFGPIDVLVNNAGY   88 (277)
T ss_pred             HHHhCCCCEEEECCCc
Confidence            21  368999999885

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.00081  Score=59.88  Aligned_cols=81  Identities=16%  Similarity=0.186  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~  234 (356)
                      +|.+|+|+||+|++|.++++.+...|++|++++++..+.          +.+.++++.. ...|..+...+...+.+...
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAG----------KAAADEVGGLFVPTDVTDEDAVNALFDTAAE   75 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHHHHcCCcEEEeeCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999887765          4443244432 23455443233333333211


Q ss_pred             --CCccEEEeCCCc
Q 018404          235 --EGIDIYFEHVGG  246 (356)
Q Consensus       235 --~~~d~vid~~g~  246 (356)
                        +++|.+|.+.|.
T Consensus        76 ~~~~id~vi~~ag~   89 (255)
T PRK06057         76 TYGSVDIAFNNAGI   89 (255)
T ss_pred             HcCCCCEEEECCCc
Confidence              368999998874

>PRK09186 flagellin modification protein A; Provisional

Probab=97.41  E-value=0.0018  Score=57.51  Aligned_cols=84  Identities=20%  Similarity=0.279  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---E-EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---D-AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~-vv~~~~~~~~~~~~~~  231 (356)
                      ++.+|+|+||+|++|...+..+...|++|+.++++.++.      +++.+.+....+..   . ..|..+.+.+.+.+.+
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   76 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEAL------NELLESLGKEFKSKKLSLVELDITDQESLEEFLSK   76 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHH------HHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999887765      11112222122221   1 2344443233333433


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|++|.+.|
T Consensus        77 ~~~~~~~id~vi~~A~   92 (256)
T PRK09186         77 SAEKYGKIDGAVNCAY   92 (256)
T ss_pred             HHHHcCCccEEEECCc
Confidence            221  36899999885

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0021  Score=57.34  Aligned_cols=79  Identities=19%  Similarity=0.254  Sum_probs=55.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC-C--C-EEEecCCcccHHHHHHHhC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG-F--D-DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-~--~-~vv~~~~~~~~~~~~~~~~  233 (356)
                      .++||+||+|++|..+++.+...|++|++++++.+..          +.+.+..+ .  . ..+|..+.+++.+.+.+..
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   71 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGL----------AALAAELGAGNAWTGALDVTDRAAWDAALADFA   71 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH----------HHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            4799999999999999998888999999999888776          55542332 1  1 2345554323444343321


Q ss_pred             ---CCCccEEEeCCCc
Q 018404          234 ---PEGIDIYFEHVGG  246 (356)
Q Consensus       234 ---~~~~d~vid~~g~  246 (356)
                         .+++|+++.|.|.
T Consensus        72 ~~~~~~id~vi~~ag~   87 (260)
T PRK08267         72 AATGGRLDVLFNNAGI   87 (260)
T ss_pred             HHcCCCCCEEEECCCC
Confidence               3479999999984

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.41  E-value=0.0022  Score=57.11  Aligned_cols=84  Identities=15%  Similarity=0.245  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|..+++.+...|++|+.+++++++.      +++.+.++ +.+... .  .|..+.+.+.+.+.+.
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   78 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGA------NAVADEIN-KAGGKAIGVAMDVTNEDAVNAGIDKV   78 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHH------HHHHHHHH-hcCceEEEEECCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999887654      22223344 444421 1  2333331233333322


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|++|.|.|.
T Consensus        79 ~~~~~~~d~vi~~ag~   94 (262)
T PRK13394         79 AERFGSVDILVSNAGI   94 (262)
T ss_pred             HHHcCCCCEEEECCcc
Confidence            1  1368999998874

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.41  E-value=0.0028  Score=57.52  Aligned_cols=92  Identities=21%  Similarity=0.295  Sum_probs=68.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|++|+|+| .|.+|.+++..++.+|++|++..++.++.          +.+. ++|... +.+.   ++.+.+.     
T Consensus       150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~----------~~~~-~~g~~~-~~~~---~l~~~l~-----  208 (287)
T TIGR02853       150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADL----------ARIT-EMGLIP-FPLN---KLEEKVA-----  208 (287)
T ss_pred             CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HCCCee-ecHH---HHHHHhc-----
Confidence            478999999 79999999999999999999999988776          6565 666532 2111   2222232     


Q ss_pred             CccEEEeCCCchHH-HHHHHhhccCCeEEEEccc
Q 018404          236 GIDIYFEHVGGKML-DAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       236 ~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~  268 (356)
                      .+|+||+|+....+ ...+..++++..++.+++.
T Consensus       209 ~aDiVint~P~~ii~~~~l~~~k~~aliIDlas~  242 (287)
T TIGR02853       209 EIDIVINTIPALVLTADVLSKLPKHAVIIDLASK  242 (287)
T ss_pred             cCCEEEECCChHHhCHHHHhcCCCCeEEEEeCcC
Confidence            48999999976543 4567788888888888873

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK06484 short chain dehydrogenase; Validated

Probab=97.41  E-value=0.0012  Score=65.29  Aligned_cols=105  Identities=15%  Similarity=0.175  Sum_probs=71.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||++++|.+.++.+...|++|+.++++.++.          +.+.++.+..   ..+|..+.+++...+.+.
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  337 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGA----------KKLAEALGDEHLSVQADITDEAAVESAFAQI  337 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhCCceeEEEccCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999987776          5555345432   223444432333333333


Q ss_pred             CC--CCccEEEeCCCch------------H---------------HHHHHHhhccCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK------------M---------------LDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ..  +.+|++|.+.|..            .               .+.++..++.+|+++.++....
T Consensus       338 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~  404 (520)
T PRK06484        338 QARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS  404 (520)
T ss_pred             HHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            21  3699999988731            0               2344555666799999987544

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.40  E-value=0.0018  Score=58.59  Aligned_cols=108  Identities=10%  Similarity=0.080  Sum_probs=68.6

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~  231 (356)
                      .+++++|+||+  +|+|+++++.+...|++|+.+.++....      +.+ +.+.++++..  ..+|..+.+.....+.+
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~------~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   76 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALK------KRV-EPIAQELGSDYVYELDVSKPEHFKSLAES   76 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHH------HHH-HHHHHhcCCceEEEecCCCHHHHHHHHHH
Confidence            46899999987  7999999999888999999988774211      111 3332245532  23454443233333333


Q ss_pred             hCC--CCccEEEeCCCch------------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGGK------------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ...  +.+|+++++.|..                              ..+.++..+.++|+++.++...+
T Consensus        77 i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~  147 (274)
T PRK08415         77 LKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG  147 (274)
T ss_pred             HHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence            322  4799999998831                              12445566777899998876543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.39  E-value=0.00079  Score=60.26  Aligned_cols=81  Identities=17%  Similarity=0.208  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|.++++.+...|++|+.++++.++.          +.+.++++..   ...|..+..+....+.+.
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKL----------ASLRQRFGDHVLVVEGDVTSYADNQRAVDQT   74 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhCCcceEEEccCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999987776          5555344421   122433321333333332


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+.+|++|.+.|.
T Consensus        75 ~~~~g~id~li~~ag~   90 (263)
T PRK06200         75 VDAFGKLDCFVGNAGI   90 (263)
T ss_pred             HHhcCCCCEEEECCCC
Confidence            2  1368999998883

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.38  E-value=0.0044  Score=53.07  Aligned_cols=102  Identities=21%  Similarity=0.243  Sum_probs=68.6

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCC-CEEEecCCcccHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DDAFNYKEENDLDA  227 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~  227 (356)
                      ...+.++++|+-.| +|. |..++.+++.++  .+|++++.+++..      +.+++.++ .++. +.+.....  +..+
T Consensus        35 ~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~------~~a~~n~~-~~g~~~~v~~~~~--d~~~  103 (198)
T PRK00377         35 KLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAI------NLTRRNAE-KFGVLNNIVLIKG--EAPE  103 (198)
T ss_pred             HcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHH------HHHHHHHH-HhCCCCCeEEEEe--chhh
Confidence            45788999999999 565 999999998874  5899999998876      22223344 5663 32211111  3333


Q ss_pred             HHHHhCCCCccEEEeCCCc----hHHHHHHHhhccCCeEEE
Q 018404          228 ALKRCFPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAA  264 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  264 (356)
                      .+... .+.+|.||...+.    ..+..+.+.|+++|+++.
T Consensus       104 ~l~~~-~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        104 ILFTI-NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             hHhhc-CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            33322 2379999986553    367788899999999885

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.003  Score=55.25  Aligned_cols=84  Identities=12%  Similarity=0.160  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~  234 (356)
                      ++.++||+||+|++|..+++.+...|++|+.++++.++.      .+..+.+. ..+... ..|..+..++.+.+.+...
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPL------SQTLPGVP-ADALRIGGIDLVDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhH------HHHHHHHh-hcCceEEEeecCCHHHHHHHHHHHHH
Confidence            368999999999999999998888899999999976653      00002222 223321 2343332233333333221


Q ss_pred             --CCccEEEeCCCc
Q 018404          235 --EGIDIYFEHVGG  246 (356)
Q Consensus       235 --~~~d~vid~~g~  246 (356)
                        +++|+||.+.|.
T Consensus        79 ~~~~~d~vi~~ag~   92 (239)
T PRK12828         79 QFGRLDALVNIAGA   92 (239)
T ss_pred             HhCCcCEEEECCcc
Confidence              378999998873

>PRK07985 oxidoreductase; Provisional

Probab=97.37  E-value=0.0026  Score=58.08  Aligned_cols=110  Identities=14%  Similarity=0.115  Sum_probs=67.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|.++++.+...|++|+.+.++.+..    ..+++.+.++ +.+..   ...|..+.+.+...+.+.
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEE----DAQDVKKIIE-ECGRKAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchh----hHHHHHHHHH-HcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999877543321    0122223333 33432   123444432333333333


Q ss_pred             CC--CCccEEEeCCCch---------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK---------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ..  +++|+++.+.|..                           .++.+++.++++|++|.++....
T Consensus       123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~  189 (294)
T PRK07985        123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_pred             HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence            22  3789999987731                           11344455667899999887544

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.36  E-value=0.003  Score=56.10  Aligned_cols=84  Identities=20%  Similarity=0.317  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|+.++++.++.      .++.+.++ ..+.. ..  .|..+.+.+.+.+.+.
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERA------ELAVAKLR-QEGIKAHAAPFNVTHKQEVEAAIEHI   80 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHH------HHHHHHHH-hcCCeEEEEecCCCCHHHHHHHHHHH
Confidence            467999999999999999999988999999999887664      12223333 22321 11  2333332333333332


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|+++.+.|.
T Consensus        81 ~~~~~~id~vi~~ag~   96 (254)
T PRK08085         81 EKDIGPIDVLINNAGI   96 (254)
T ss_pred             HHhcCCCCEEEECCCc
Confidence            1  1368999999983

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.35  E-value=0.00093  Score=59.80  Aligned_cols=80  Identities=21%  Similarity=0.272  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.+..+..   ...|..+..+..+.+.+.
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGL----------QELEAAHGDAVVGVEGDVRSLDDHKEAVARC   73 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHhhcCCceEEEEeccCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999887766          5555233321   123444322333333333


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +.+|++|.+.|
T Consensus        74 ~~~~g~id~li~~Ag   88 (262)
T TIGR03325        74 VAAFGKIDCLIPNAG   88 (262)
T ss_pred             HHHhCCCCEEEECCC
Confidence            22  36899999887

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.0014  Score=58.69  Aligned_cols=87  Identities=21%  Similarity=0.303  Sum_probs=55.9

Q ss_pred             CCCCCEEEEecCCc-hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE----EecCCcccHHHH
Q 018404          154 PKKGEYIYVSAASG-AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA----FNYKEENDLDAA  228 (356)
Q Consensus       154 ~~~g~~VlI~ga~g-~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v----v~~~~~~~~~~~  228 (356)
                      +.++.+++|+||+| ++|.++++.+...|++|++++++.+++      ++..+.+++.++...+    .|..+.+++...
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   87 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRL------GETADELAAELGLGRVEAVVCDVTSEAQVDAL   87 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHHHhcCCceEEEEEccCCCHHHHHHH
Confidence            34578999999986 899999999999999999998877665      1222333312443222    244443233333


Q ss_pred             HHHhC--CCCccEEEeCCCc
Q 018404          229 LKRCF--PEGIDIYFEHVGG  246 (356)
Q Consensus       229 ~~~~~--~~~~d~vid~~g~  246 (356)
                      +.+..  .+++|++|.+.|.
T Consensus        88 ~~~~~~~~g~id~li~~ag~  107 (262)
T PRK07831         88 IDAAVERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            33221  1478999999984

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.34  E-value=0.0015  Score=60.55  Aligned_cols=85  Identities=13%  Similarity=0.254  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-C---EEEecCCc-ccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-D---DAFNYKEE-NDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~---~vv~~~~~-~~~~~~~~  230 (356)
                      .|.+++|+||+|++|.+.++.+...|++|+.++++++++      +++.+.+++..+. .   ..+|..+. .+..+.+.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l------~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~  125 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKL------KDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIK  125 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHH------HHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHH
Confidence            478999999999999999988888899999999998876      2233333322221 1   22344321 13334444


Q ss_pred             HhCCC-CccEEEeCCCc
Q 018404          231 RCFPE-GIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~~-~~d~vid~~g~  246 (356)
                      +..++ .+|+++++.|.
T Consensus       126 ~~~~~~didilVnnAG~  142 (320)
T PLN02780        126 ETIEGLDVGVLINNVGV  142 (320)
T ss_pred             HHhcCCCccEEEEecCc
Confidence            44444 67799998873

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.34  E-value=0.0031  Score=56.87  Aligned_cols=108  Identities=10%  Similarity=0.058  Sum_probs=66.6

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASG--AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g--~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~~  231 (356)
                      ++.++||+||++  ++|.++++.+...|++|+.+.++....      +++ +.+.++.|...  ..|-.+.++....+.+
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~------~~~-~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~   78 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG------KRV-KPLAESLGSDFVLPCDVEDIASVDAVFEA   78 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH------HHH-HHHHHhcCCceEEeCCCCCHHHHHHHHHH
Confidence            478999999986  999999999999999999988764321      111 22221445322  2344443233333333


Q ss_pred             hCC--CCccEEEeCCCch---------------H---------------HHHHHHhhccCCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGGK---------------M---------------LDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ...  +.+|+++++.|..               .               .+.+++.|..+|+++.++....
T Consensus        79 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~  149 (271)
T PRK06505         79 LEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGS  149 (271)
T ss_pred             HHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCc
Confidence            221  4799999998831               0               1233455666799998877543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.34  E-value=0.0044  Score=52.07  Aligned_cols=93  Identities=20%  Similarity=0.202  Sum_probs=64.9

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccE
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDI  239 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~  239 (356)
                      |+|.||+|.+|..+++.+...|.+|++++|++++.          +.   ..+++ ++..+-. +. +.+.+... ++|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~----------~~---~~~~~-~~~~d~~-d~-~~~~~al~-~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKA----------ED---SPGVE-IIQGDLF-DP-DSVKAALK-GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGH----------HH---CTTEE-EEESCTT-CH-HHHHHHHT-TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhc----------cc---ccccc-cceeeeh-hh-hhhhhhhh-hcch
Confidence            79999999999999999999999999999998886          43   22333 3322221 22 23333222 6999


Q ss_pred             EEeCCCc-----hHHHHHHHhhccCC--eEEEEcccc
Q 018404          240 YFEHVGG-----KMLDAVLLNMRLHG--RIAACGMIS  269 (356)
Q Consensus       240 vid~~g~-----~~~~~~~~~l~~~G--~~v~~g~~~  269 (356)
                      ||.+.|.     ......++.++..|  +++.++..+
T Consensus        64 vi~~~~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   64 VIHAAGPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             EEECCHSTTTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             hhhhhhhhcccccccccccccccccccccceeeeccc
Confidence            9999993     34566666665554  778777644

...

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.33  E-value=0.0011  Score=60.40  Aligned_cols=84  Identities=21%  Similarity=0.326  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.+.++.+...|++|++++++.++.      +++.+.+. +.+.. ..  .|..+.+.+.+.+.+.
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l------~~~~~~l~-~~~~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLL------DAVADRIT-RAGGDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            357999999999999999998888999999999987765      22223333 23332 12  3433332333333322


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|++|.|.|.
T Consensus       112 ~~~~g~id~li~~AG~  127 (293)
T PRK05866        112 EKRIGGVDILINNAGR  127 (293)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            1  1378999999874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.33  E-value=0.0027  Score=56.35  Aligned_cols=83  Identities=24%  Similarity=0.316  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+|+|+||+|++|..+++.+...|++|++++++.++.      +++...++ ..+..   ...|..+.+++.+.+.+.
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   75 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAA------AAAAEALQ-KAGGKAIGVAMDVTDEEAINAGIDYA   75 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            357999999999999999998888899999999987765      12222333 23332   223444432333333332


Q ss_pred             C--CCCccEEEeCCC
Q 018404          233 F--PEGIDIYFEHVG  245 (356)
Q Consensus       233 ~--~~~~d~vid~~g  245 (356)
                      .  .+++|++|.+.|
T Consensus        76 ~~~~~~~d~vi~~a~   90 (258)
T PRK12429         76 VETFGGVDILVNNAG   90 (258)
T ss_pred             HHHcCCCCEEEECCC
Confidence            1  136899999887

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.33  E-value=0.0026  Score=56.35  Aligned_cols=78  Identities=17%  Similarity=0.309  Sum_probs=53.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHhCC-
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRCFP-  234 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~~~-  234 (356)
                      +|+|.||+|++|.+.+..+...|++|+++++++++.          +.+.+.++...   ..|..+.+.+.+.+.+... 
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   71 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL----------QELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE   71 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999988776          55543444321   2243333233333333221 


Q ss_pred             -CCccEEEeCCCc
Q 018404          235 -EGIDIYFEHVGG  246 (356)
Q Consensus       235 -~~~d~vid~~g~  246 (356)
                       +++|.++.+.|.
T Consensus        72 ~~~id~vi~~ag~   84 (248)
T PRK10538         72 WRNIDVLVNNAGL   84 (248)
T ss_pred             cCCCCEEEECCCc
Confidence             369999998874

>PRK06484 short chain dehydrogenase; Validated

Probab=97.32  E-value=0.0023  Score=63.36  Aligned_cols=81  Identities=20%  Similarity=0.283  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||++++|.++++.+...|++|+.++++.++.          +.+..+++..   ..+|..+..++.+.+.+.
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERA----------RERADSLGPDHHALAMDVSDEAQIREGFEQL   73 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhCCceeEEEeccCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999887776          4444355542   234444432343334333


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        74 ~~~~g~iD~li~nag~   89 (520)
T PRK06484         74 HREFGRIDVLVNNAGV   89 (520)
T ss_pred             HHHhCCCCEEEECCCc
Confidence            21  379999998874

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.32  E-value=0.005  Score=55.30  Aligned_cols=83  Identities=22%  Similarity=0.232  Sum_probs=58.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE---EecC-----CcccH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA---FNYK-----EENDL  225 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~-----~~~~~  225 (356)
                      .++..+|+|.|+++|+|++.+.-++..|++|..+.++.+++          ..+.+.++....   +.+.     +.+..
T Consensus        30 ~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl----------~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v   99 (331)
T KOG1210|consen   30 PKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKL----------LEAKAELELLTQVEDVSYKSVDVIDYDSV   99 (331)
T ss_pred             cCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHH----------HHHHhhhhhhhccceeeEeccccccHHHH
Confidence            34557999999999999999999999999999999999998          555545554211   1121     11122


Q ss_pred             HHHHHHhC--CCCccEEEeCCCc
Q 018404          226 DAALKRCF--PEGIDIYFEHVGG  246 (356)
Q Consensus       226 ~~~~~~~~--~~~~d~vid~~g~  246 (356)
                      ...+++.-  .+.+|.+|.|.|.
T Consensus       100 ~~~~~~l~~~~~~~d~l~~cAG~  122 (331)
T KOG1210|consen  100 SKVIEELRDLEGPIDNLFCCAGV  122 (331)
T ss_pred             HHHHhhhhhccCCcceEEEecCc
Confidence            33344332  2378999999994

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.30  E-value=0.0016  Score=57.35  Aligned_cols=79  Identities=20%  Similarity=0.295  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~  234 (356)
                      ++.+++|+|++|++|..+++.+...|++|++++++.++.          +.+.+..+... ..|..+...+...+.+  .
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~----------~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~   75 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAAL----------DRLAGETGCEPLRLDVGDDAAIRAALAA--A   75 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhCCeEEEecCCCHHHHHHHHHH--h
Confidence            467999999999999999999999999999999887765          55542444432 2344443122222322  1


Q ss_pred             CCccEEEeCCCc
Q 018404          235 EGIDIYFEHVGG  246 (356)
Q Consensus       235 ~~~d~vid~~g~  246 (356)
                      +++|++|.+.|.
T Consensus        76 ~~~d~vi~~ag~   87 (245)
T PRK07060         76 GAFDGLVNCAGI   87 (245)
T ss_pred             CCCCEEEECCCC
Confidence            368999999884

>PRK09242 tropinone reductase; Provisional

Probab=97.30  E-value=0.0027  Score=56.56  Aligned_cols=85  Identities=21%  Similarity=0.301  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc-CCC-E--EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFD-D--AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~-~--vv~~~~~~~~~~~~~~  231 (356)
                      .+.+++|+||+|++|..+++.+...|++|++++++.+..      .++.+.++... +.. .  ..|..+.++....+.+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   81 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADAL------AQARDELAEEFPEREVHGLAADVSDDEDRRAILDW   81 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999887665      11222222111 221 1  2244333233333332


Q ss_pred             hC--CCCccEEEeCCCc
Q 018404          232 CF--PEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~--~~~~d~vid~~g~  246 (356)
                      ..  -+++|+++.+.|.
T Consensus        82 ~~~~~g~id~li~~ag~   98 (257)
T PRK09242         82 VEDHWDGLHILVNNAGG   98 (257)
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            21  1379999999984

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0022  Score=57.14  Aligned_cols=86  Identities=14%  Similarity=0.148  Sum_probs=55.3

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcch-hccccchhHHHHHHHhhcCC-C-EE--EecCCcccHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREK-VWLIPMQSQLVELLKNKFGF-D-DA--FNYKEENDLDA  227 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~-~v--v~~~~~~~~~~  227 (356)
                      +..+.+|+|+||+|++|.+.++-+... |++|++++++.++ +      +++.+.++ ..+. . +.  +|..+.+++.+
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~------~~~~~~l~-~~~~~~v~~~~~D~~~~~~~~~   77 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRR------DAAVAQMK-AAGASSVEVIDFDALDTDSHPK   77 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhH------HHHHHHHH-hcCCCceEEEEecCCChHHHHH
Confidence            556789999999999999999877666 5899999988775 4      22223444 3332 1 22  34444323333


Q ss_pred             HHHHhCC-CCccEEEeCCCc
Q 018404          228 ALKRCFP-EGIDIYFEHVGG  246 (356)
Q Consensus       228 ~~~~~~~-~~~d~vid~~g~  246 (356)
                      .+.+... +++|+++.+.|.
T Consensus        78 ~~~~~~~~g~id~li~~ag~   97 (253)
T PRK07904         78 VIDAAFAGGDVDVAIVAFGL   97 (253)
T ss_pred             HHHHHHhcCCCCEEEEeeec
Confidence            3443322 479999987764

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0014  Score=58.27  Aligned_cols=84  Identities=24%  Similarity=0.339  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|.+.+..+...|++|+.+++++++.      +++.+.++ +.+...   ..|..+.+.....+.+.
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAEL------DQLVAEIR-AEGGEAVALAGDVRDEAYAKALVALA   77 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            367999999999999999999888999999999887765      22233333 334321   12433332233333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        78 ~~~~~~id~li~~ag~   93 (254)
T PRK07478         78 VERFGGLDIAFNNAGT   93 (254)
T ss_pred             HHhcCCCCEEEECCCC
Confidence            21  379999998873

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0014  Score=58.22  Aligned_cols=84  Identities=19%  Similarity=0.216  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|.++++.+...|++|+.+.++.++.      +++.+.++ ..+..   ...|..+...+.+.+.+.
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDAL------EKLADEIG-TSGGKVVPVCCDVSQHQQVTSMLDQV   80 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH------HHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999887765      12222233 22321   123444432333333332


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  -+++|+++.+.|.
T Consensus        81 ~~~~g~id~lv~~ag~   96 (253)
T PRK05867         81 TAELGGIDIAVCNAGI   96 (253)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            1  1379999998873

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0025  Score=57.22  Aligned_cols=78  Identities=17%  Similarity=0.325  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~  234 (356)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++.          +...   +.. ...|..+.+++.+.+.+...
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~----------~~~~---~~~~~~~D~~d~~~~~~~~~~~~~   69 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA----------APIP---GVELLELDVTDDASVQAAVDEVIA   69 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc----------cccC---CCeeEEeecCCHHHHHHHHHHHHH
Confidence            356899999999999999998888999999999886654          2221   222 23455443244444443321


Q ss_pred             --CCccEEEeCCCc
Q 018404          235 --EGIDIYFEHVGG  246 (356)
Q Consensus       235 --~~~d~vid~~g~  246 (356)
                        +.+|++|.+.|.
T Consensus        70 ~~g~~d~li~~ag~   83 (270)
T PRK06179         70 RAGRIDVLVNNAGV   83 (270)
T ss_pred             hCCCCCEEEECCCC
Confidence              368999999984

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0018  Score=57.61  Aligned_cols=85  Identities=21%  Similarity=0.260  Sum_probs=54.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-CE--EEecCCcccHHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DD--AFNYKEENDLDAALKR  231 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~--vv~~~~~~~~~~~~~~  231 (356)
                      ..+.+|+|+||+|++|..++..+...|++|+++.++.++.      +++...++ ..+. ..  ..|..+.+++.+.+.+
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~   79 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERL------KELRAEIE-AEGGAAHVVSLDVTDYQSIKAAVAH   79 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHH
Confidence            3478999999999999999999999999999999987775      11112222 1221 11  2333332233333333


Q ss_pred             hC--CCCccEEEeCCCc
Q 018404          232 CF--PEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~--~~~~d~vid~~g~  246 (356)
                      ..  .+++|++|.+.|.
T Consensus        80 ~~~~~~~~d~li~~ag~   96 (258)
T PRK06949         80 AETEAGTIDILVNNSGV   96 (258)
T ss_pred             HHHhcCCCCEEEECCCC
Confidence            21  1378999999983

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0018  Score=56.49  Aligned_cols=78  Identities=17%  Similarity=0.163  Sum_probs=54.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHHhCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .+|+|+||+|++|.+.+..+...|++|+++++++++.          +.++ +++-.  ..+|..+.+++.+.+.++..+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~----------~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~   70 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQD----------TALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQ   70 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcch----------HHHH-hccccceEEcCCCCHHHHHHHHHHhhcC
Confidence            4799999999999999988888999999999988776          5554 43221  223444432333334444334


Q ss_pred             CccEEEeCCCc
Q 018404          236 GIDIYFEHVGG  246 (356)
Q Consensus       236 ~~d~vid~~g~  246 (356)
                      ++|++|.+.|.
T Consensus        71 ~id~vi~~ag~   81 (225)
T PRK08177         71 RFDLLFVNAGI   81 (225)
T ss_pred             CCCEEEEcCcc
Confidence            79999988763

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.26  E-value=0.0018  Score=57.31  Aligned_cols=83  Identities=17%  Similarity=0.271  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+|++|++|..+++.+...|++|+.++++.++.      +++.+.++ ..+..   ...|..+.+...+.+.+.
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKL------EEAVAECG-ALGTEVRGYAANVTDEEDVEATFAQI   76 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999887665      11223333 33432   123333321333333332


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|.+|.+.|
T Consensus        77 ~~~~~~id~vi~~ag   91 (253)
T PRK08217         77 AEDFGQLNGLINNAG   91 (253)
T ss_pred             HHHcCCCCEEEECCC
Confidence            22  36899999887

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.26  E-value=0.0051  Score=54.79  Aligned_cols=82  Identities=22%  Similarity=0.229  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|.++++.+...|++|+.+++++...       ++.+.+. ..+..   ...|..+..+....+.+.
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~-------~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVH-------EVAAELR-AAGGEALALTADLETYAGAQAAMAAA   78 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHH-------HHHHHHH-hcCCeEEEEEEeCCCHHHHHHHHHHH
Confidence            367999999999999999999999999999998864321       1223333 33432   223444432333333332


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        79 ~~~~~~id~lv~nAg   93 (260)
T PRK12823         79 VEAFGRIDVLINNVG   93 (260)
T ss_pred             HHHcCCCeEEEECCc
Confidence            21  36999999987

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.25  E-value=0.00099  Score=51.14  Aligned_cols=94  Identities=22%  Similarity=0.303  Sum_probs=62.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCcchhccccchhHHHHHHHhhc---CCCEEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKL-MGCYVVGSAGSREKVWLIPMQSQLVELLKNKF---GFDDAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~-~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~~  231 (356)
                      |+.+||-.|  .|.|..++.+++. .+++|++++.+++-.          +.+++..   +...-+..... ++  ....
T Consensus         1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~----------~~a~~~~~~~~~~~~i~~~~~-d~--~~~~   65 (112)
T PF12847_consen    1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEML----------EIARERAAEEGLSDRITFVQG-DA--EFDP   65 (112)
T ss_dssp             TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHH----------HHHHHHHHHTTTTTTEEEEES-CC--HGGT
T ss_pred             CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHH----------HHHHHHHHhcCCCCCeEEEEC-cc--ccCc
Confidence            678999998  4568899999994 689999999998877          5555333   33111111111 33  1111


Q ss_pred             hCCCCccEEEeCC-Cc----h------HHHHHHHhhccCCeEEE
Q 018404          232 CFPEGIDIYFEHV-GG----K------MLDAVLLNMRLHGRIAA  264 (356)
Q Consensus       232 ~~~~~~d~vid~~-g~----~------~~~~~~~~l~~~G~~v~  264 (356)
                      ...+++|+|+... ..    .      .++.+.+.|+|+|+++.
T Consensus        66 ~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   66 DFLEPFDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             TTSSCEEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccCCCCCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence            1123799999877 21    2      27888999999999875

...

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.24  E-value=0.005  Score=54.71  Aligned_cols=84  Identities=21%  Similarity=0.283  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|.||+|++|..+++.+...|++|+.+.++.+..      +++.+.++ +.+..   ...|..+..++...+.+.
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATL------EAAVAALR-AAGGAAEALAFDIADEEAVAAAFARI   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHH------HHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999998888999999999987654      12223333 34431   123444432333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|.+|.+.|.
T Consensus        83 ~~~~~~id~vi~~ag~   98 (256)
T PRK06124         83 DAEHGRLDILVNNVGA   98 (256)
T ss_pred             HHhcCCCCEEEECCCC
Confidence            21  368999998884

>PRK08017 oxidoreductase; Provisional

Probab=97.23  E-value=0.0023  Score=56.86  Aligned_cols=78  Identities=13%  Similarity=0.236  Sum_probs=56.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHH---HHHHhC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDA---ALKRCF  233 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~---~~~~~~  233 (356)
                      ++++|+||+|++|.++++.+...|++|++++++.++.          +.++ +.+... ..|..+.+.+.+   .+.+..
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~----------~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~   71 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV----------ARMN-SLGFTGILLDLDDPESVERAADEVIALT   71 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh----------HHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhc
Confidence            4799999999999999999999999999999988877          6666 666543 344444312222   333333


Q ss_pred             CCCccEEEeCCCc
Q 018404          234 PEGIDIYFEHVGG  246 (356)
Q Consensus       234 ~~~~d~vid~~g~  246 (356)
                      .+.+|.++.+.|.
T Consensus        72 ~~~~~~ii~~ag~   84 (256)
T PRK08017         72 DNRLYGLFNNAGF   84 (256)
T ss_pred             CCCCeEEEECCCC
Confidence            3478899988773

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.21  E-value=0.00069  Score=65.80  Aligned_cols=96  Identities=16%  Similarity=0.179  Sum_probs=69.4

Q ss_pred             HHcCCCCCCEEE----EecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCccc
Q 018404          150 EICAPKKGEYIY----VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEEND  224 (356)
Q Consensus       150 ~~~~~~~g~~Vl----I~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~  224 (356)
                      .+.++++|+++|    |+||+|++|.+++|+++.+|++|+++.+...+.          ...+ ..+.. .++|.+.. .
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~----------~~~~-~~~~~~~~~d~~~~-~   94 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW----------AAGW-GDRFGALVFDATGI-T   94 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc----------ccCc-CCcccEEEEECCCC-C
Confidence            346788999998    999999999999999999999999988776643          3333 34444 46666554 3


Q ss_pred             HHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccc
Q 018404          225 LDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      +.+.+...+             ..+..+++.|.++|+++.++....
T Consensus        95 ~~~~l~~~~-------------~~~~~~l~~l~~~griv~i~s~~~  127 (450)
T PRK08261         95 DPADLKALY-------------EFFHPVLRSLAPCGRVVVLGRPPE  127 (450)
T ss_pred             CHHHHHHHH-------------HHHHHHHHhccCCCEEEEEccccc
Confidence            344443321             356677888899999999987543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.20  E-value=0.0029  Score=56.36  Aligned_cols=104  Identities=13%  Similarity=0.032  Sum_probs=65.0

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC---C-EEEecCCcccHHHHH
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF---D-DAFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~-~vv~~~~~~~~~~~~  229 (356)
                      .|++++|+||+  +++|.++++.+...|++|+.+.++....          +.++ +...   . ..+|..+.++..+.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~----------~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~   74 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMK----------KSLQ-KLVDEEDLLVECDVASDESIERAF   74 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHH----------HHHH-hhccCceeEEeCCCCCHHHHHHHH
Confidence            47899999998  7999999998888999999998763222          2233 3211   1 123443322333333


Q ss_pred             HHhCC--CCccEEEeCCCch------------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          230 KRCFP--EGIDIYFEHVGGK------------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      .+...  +.+|+++.+.|..                              ..+.++..++++|+++.++....
T Consensus        75 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~  147 (252)
T PRK06079         75 ATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS  147 (252)
T ss_pred             HHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence            33221  3699999988731                              01334556677899998876543

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0019  Score=58.42  Aligned_cols=83  Identities=19%  Similarity=0.301  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.+++..+...|++|++++++.++.      +++.+.++ ..+...   .+|..+..++.+.+.+.
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l------~~~~~~l~-~~~~~~~~~~~Dv~d~~~v~~~~~~~   77 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGL------RQAVNHLR-AEGFDVHGVMCDVRHREEVTHLADEA   77 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999998887665      22223333 334321   23433332333333322


Q ss_pred             C--CCCccEEEeCCC
Q 018404          233 F--PEGIDIYFEHVG  245 (356)
Q Consensus       233 ~--~~~~d~vid~~g  245 (356)
                      .  .+.+|++|.+.|
T Consensus        78 ~~~~g~id~li~nAg   92 (275)
T PRK05876         78 FRLLGHVDVVFSNAG   92 (275)
T ss_pred             HHHcCCCCEEEECCC
Confidence            1  136899999888

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.20  E-value=0.00041  Score=69.36  Aligned_cols=88  Identities=19%  Similarity=0.267  Sum_probs=57.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch----------hcccc-chhHHHHHHHhhcCCCEEEecCC
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK----------VWLIP-MQSQLVELLKNKFGFDDAFNYKE  221 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~----------~~~~~-~~~~~~~~~~~~~g~~~vv~~~~  221 (356)
                      ...+|++|+|.| +|+.|+++++.++.+|++|++++..+.-          .+++. ..+...+.++ ++|++..++...
T Consensus       133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence            367899999999 8999999999999999999998854210          00000 0111125666 788876665432


Q ss_pred             -cccH-HHHHHHhCCCCccEEEeCCCch
Q 018404          222 -ENDL-DAALKRCFPEGIDIYFEHVGGK  247 (356)
Q Consensus       222 -~~~~-~~~~~~~~~~~~d~vid~~g~~  247 (356)
                       . +. .+.+.    .++|+||+++|..
T Consensus       211 ~~-~~~~~~~~----~~~D~Vi~AtG~~  233 (564)
T PRK12771        211 GE-DITLEQLE----GEFDAVFVAIGAQ  233 (564)
T ss_pred             CC-cCCHHHHH----hhCCEEEEeeCCC
Confidence             1 21 11221    2699999999973

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0025  Score=58.77  Aligned_cols=85  Identities=16%  Similarity=0.160  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC-CC---EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG-FD---DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~---~vv~~~~~~~~~~~~~~  231 (356)
                      .|.+++|+||++++|.+++..+...|++|+.++++.++.      +++.+.+.+..+ ..   ..+|..+.++..+.+.+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~------~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~   86 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKG------EAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQ   86 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHH
Confidence            468999999999999999998888999999999987765      122233331222 11   12344443233333333


Q ss_pred             hC--CCCccEEEeCCCc
Q 018404          232 CF--PEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~--~~~~d~vid~~g~  246 (356)
                      +.  .+.+|++|.+.|.
T Consensus        87 ~~~~~~~iD~li~nAG~  103 (313)
T PRK05854         87 LRAEGRPIHLLINNAGV  103 (313)
T ss_pred             HHHhCCCccEEEECCcc
Confidence            22  1378999998873

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0042  Score=56.00  Aligned_cols=80  Identities=21%  Similarity=0.228  Sum_probs=53.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~~  233 (356)
                      +.+|+|+||+|++|..+++.+...|++|+.++++.++.          +.+.+..+.. .  ..|..+...+.+.+.+..
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATL----------ADLAEKYGDRLLPLALDVTDRAAVFAAVETAV   72 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHhccCCeeEEEccCCCHHHHHHHHHHHH
Confidence            46899999999999999988888899999999987776          5554233321 1  223333223333333321


Q ss_pred             --CCCccEEEeCCCc
Q 018404          234 --PEGIDIYFEHVGG  246 (356)
Q Consensus       234 --~~~~d~vid~~g~  246 (356)
                        -+++|.+|.|.|.
T Consensus        73 ~~~~~~d~vi~~ag~   87 (275)
T PRK08263         73 EHFGRLDIVVNNAGY   87 (275)
T ss_pred             HHcCCCCEEEECCCC
Confidence              1368999999884

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.19  E-value=0.0086  Score=54.50  Aligned_cols=147  Identities=16%  Similarity=0.180  Sum_probs=82.9

Q ss_pred             CCCCCEEEEccccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHH
Q 018404           96 FKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQ  175 (356)
Q Consensus        96 ~~~Gd~V~~~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~  175 (356)
                      +.+|++.+...+|.++-..+... .+.++| .  +.+..+.-+.+ ..+...+..  ...++++||-.| +|. |..++.
T Consensus       106 ~~~g~~~~i~p~w~~~~~~~~~~-~i~ldp-g--~aFgtG~h~tt-~l~l~~l~~--~~~~g~~VLDvG-cGs-G~lai~  176 (288)
T TIGR00406       106 VQFGKRFWICPSWRDVPSDEDAL-IIMLDP-G--LAFGTGTHPTT-SLCLEWLED--LDLKDKNVIDVG-CGS-GILSIA  176 (288)
T ss_pred             EEEcCeEEEECCCcCCCCCCCcE-EEEECC-C--CcccCCCCHHH-HHHHHHHHh--hcCCCCEEEEeC-CCh-hHHHHH
Confidence            56777766666676653322333 566633 3  32212111111 112223322  245789999999 565 888877


Q ss_pred             HHHHcCC-EEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCch----
Q 018404          176 FAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK----  247 (356)
Q Consensus       176 la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~----  247 (356)
                      +++ .|+ +|++++.++...          +.+++   ..+....+..... +    ......+++|+|+......    
T Consensus       177 aa~-~g~~~V~avDid~~al----------~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDlVvan~~~~~l~~  240 (288)
T TIGR00406       177 ALK-LGAAKVVGIDIDPLAV----------ESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADVIVANILAEVIKE  240 (288)
T ss_pred             HHH-cCCCeEEEEECCHHHH----------HHHHHHHHHcCCCcceEEEec-c----cccccCCCceEEEEecCHHHHHH
Confidence            776 455 899999998776          44432   2233211111111 1    1112224799999765443    


Q ss_pred             HHHHHHHhhccCCeEEEEcc
Q 018404          248 MLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       248 ~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+..+.+.|+|+|.++..|.
T Consensus       241 ll~~~~~~LkpgG~li~sgi  260 (288)
T TIGR00406       241 LYPQFSRLVKPGGWLILSGI  260 (288)
T ss_pred             HHHHHHHHcCCCcEEEEEeC
Confidence            45677899999999998875

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0056  Score=53.92  Aligned_cols=108  Identities=16%  Similarity=0.140  Sum_probs=65.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|...++.+...|++|+.+.++....     ..++.+.+. ..+.. ..  +|..+.+++.+.+.+.
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAA-----ADELVAEIE-AAGGRAIAVQADVADAAAVTRLFDAA   77 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHH-----HHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999998877654321     011223333 33431 12  2333322333333332


Q ss_pred             C--CCCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEcccc
Q 018404          233 F--PEGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       233 ~--~~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      .  .+++|++|.+.|..                          .++.+++.++++|+++.++...
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  142 (245)
T PRK12937         78 ETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV  142 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence            1  13689999988831                          1234455566778999887643

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0038  Score=55.78  Aligned_cols=81  Identities=22%  Similarity=0.306  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc--CC-CEE--EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF--GF-DDA--FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~--g~-~~v--v~~~~~~~~~~~~~  230 (356)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.          +.+..++  +. ...  .|..+.+.+.+.+.
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   73 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKL----------EALAARLPYPGRHRWVVADLTSEAGREAVLA   73 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            467899999999999999999889999999999987765          4443232  21 112  23333212222222


Q ss_pred             HhC-CCCccEEEeCCCc
Q 018404          231 RCF-PEGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~-~~~~d~vid~~g~  246 (356)
                      ... .+.+|.++.+.|.
T Consensus        74 ~~~~~~~id~lv~~ag~   90 (263)
T PRK09072         74 RAREMGGINVLINNAGV   90 (263)
T ss_pred             HHHhcCCCCEEEECCCC
Confidence            211 2478999999884

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0014  Score=58.57  Aligned_cols=83  Identities=13%  Similarity=0.171  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhh--cCCC---EEEecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNK--FGFD---DAFNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~---~vv~~~~~~~~~~~~~  230 (356)
                      .+.+++|.||+|++|.++++.+...|++|+.++++.++.      +++.+.++ .  .+..   ...|..+..++...+.
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALA------ERAAAAIA-RDVAGARVLAVPADVTDAASVAAAVA   78 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hccCCceEEEEEccCCCHHHHHHHHH
Confidence            467999999999999999999999999999999887665      22223333 2  1221   1224433323333333


Q ss_pred             HhCC--CCccEEEeCCC
Q 018404          231 RCFP--EGIDIYFEHVG  245 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g  245 (356)
                      +...  +++|++|.+.|
T Consensus        79 ~~~~~~g~id~li~~ag   95 (260)
T PRK07063         79 AAEEAFGPLDVLVNNAG   95 (260)
T ss_pred             HHHHHhCCCcEEEECCC
Confidence            3221  36999999988

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.18  E-value=0.0022  Score=57.01  Aligned_cols=84  Identities=23%  Similarity=0.275  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|.++++.+...|++|+.+.+++++.      +++.+.++ +.|..   ...|..+.+++.+.+.+.
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~i~-~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKL------AAAAESLK-GQGLSAHALAFDVTDHDAVRAAIDAF   81 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHH-hcCceEEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999998888899999999887654      12223333 33331   122444432333333332


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|++|.+.|.
T Consensus        82 ~~~~~~~d~li~~ag~   97 (255)
T PRK07523         82 EAEIGPIDILVNNAGM   97 (255)
T ss_pred             HHhcCCCCEEEECCCC
Confidence            2  2368999999884

>PRK06196 oxidoreductase; Provisional

Probab=97.17  E-value=0.0018  Score=59.72  Aligned_cols=80  Identities=15%  Similarity=0.187  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC-CC-EEEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG-FD-DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~~~~~~  233 (356)
                      .+.+|+|+||+|++|.+++..+...|++|++++++.++.          +.+.+++. .. ...|..+..++.+.+.+..
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~----------~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~   94 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVA----------REALAGIDGVEVVMLDLADLESVRAFAERFL   94 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhhhCeEEEccCCCHHHHHHHHHHHH
Confidence            467999999999999999998888999999999987765          33321222 21 1234444323333343332


Q ss_pred             C--CCccEEEeCCC
Q 018404          234 P--EGIDIYFEHVG  245 (356)
Q Consensus       234 ~--~~~d~vid~~g  245 (356)
                      .  +++|++|.+.|
T Consensus        95 ~~~~~iD~li~nAg  108 (315)
T PRK06196         95 DSGRRIDILINNAG  108 (315)
T ss_pred             hcCCCCCEEEECCC
Confidence            2  37999999887

>PRK08589 short chain dehydrogenase; Validated

Probab=97.16  E-value=0.0027  Score=57.21  Aligned_cols=83  Identities=20%  Similarity=0.253  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||++++|.+.++.+...|++|++++++ ++.      +++.+.++ +.+..   ..+|..+..+....+.+.
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   76 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAV------SETVDKIK-SNGGKAKAYHVDISDEQQVKDFASEI   76 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHH------HHHHHHHH-hcCCeEEEEEeecCCHHHHHHHHHHH
Confidence            47799999999999999999888899999999988 543      12223333 33321   234444432333333332


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|++|.+.|.
T Consensus        77 ~~~~g~id~li~~Ag~   92 (272)
T PRK08589         77 KEQFGRVDVLFNNAGV   92 (272)
T ss_pred             HHHcCCcCEEEECCCC
Confidence            2  1368999998873

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.003  Score=56.15  Aligned_cols=78  Identities=14%  Similarity=0.229  Sum_probs=51.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~  233 (356)
                      +.++||+||+|++|..+++.+...|++|++++++.+..      .++.+..+ ..+..   ...|..+.    +.+.+..
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~----~~~~~~~   70 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQV------TALRAEAA-RRGLALRVEKLDLTDA----IDRAQAA   70 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcceEEEeeCCCH----HHHHHHh
Confidence            45899999999999999999999999999999886654      11112222 33322   12344332    2233333


Q ss_pred             CCCccEEEeCCC
Q 018404          234 PEGIDIYFEHVG  245 (356)
Q Consensus       234 ~~~~d~vid~~g  245 (356)
                      .+++|++|.+.|
T Consensus        71 ~~~id~vi~~ag   82 (257)
T PRK09291         71 EWDVDVLLNNAG   82 (257)
T ss_pred             cCCCCEEEECCC
Confidence            347999999988

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.15  E-value=0.0056  Score=54.66  Aligned_cols=108  Identities=11%  Similarity=0.070  Sum_probs=65.9

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~~  231 (356)
                      +|.+++|+||+  +++|.++++.+...|++|+.+.++.+..      +.+ +.+.++++....  +|..+.++....+.+
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~------~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   81 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR------PYV-EPLAEELDAPIFLPLDVREPGQLEAVFAR   81 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH------HHH-HHHHHhhccceEEecCcCCHHHHHHHHHH
Confidence            47899999988  4999999999989999999988775432      011 222213333222  343332233333332


Q ss_pred             hCC--CCccEEEeCCCch---------------H---------------HHHHHHhhccCCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGGK---------------M---------------LDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ...  +.+|+++.+.|..               .               .+.++..++.+|+++.++....
T Consensus        82 ~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~  152 (258)
T PRK07533         82 IAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGA  152 (258)
T ss_pred             HHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence            211  4799999988731               1               1344556677899988876443

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0024  Score=56.03  Aligned_cols=83  Identities=10%  Similarity=0.151  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHH--
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALK--  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~--  230 (356)
                      +|.+++|.||++++|.+.+.-+...|++|+.+.++.+++      +++.+.++ +.+..   ..+|..+.+++.+.+.  
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l------~~~~~~i~-~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSAL------KDTYEQCS-ALTDNVYSFQLKDFSQESIRHLFDAI   76 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH------HHHHHHHH-hcCCCeEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999989999999999887765      22223333 33432   1233333213322232  


Q ss_pred             -HhCCCCccEEEeCCC
Q 018404          231 -RCFPEGIDIYFEHVG  245 (356)
Q Consensus       231 -~~~~~~~d~vid~~g  245 (356)
                       +..++.+|++|.+.|
T Consensus        77 ~~~~g~~iD~li~nag   92 (227)
T PRK08862         77 EQQFNRAPDVLVNNWT   92 (227)
T ss_pred             HHHhCCCCCEEEECCc
Confidence             222226999999986

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.13  E-value=0.0082  Score=52.70  Aligned_cols=84  Identities=21%  Similarity=0.296  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~~  232 (356)
                      ++.+|+|+||+|++|...++.+...|.+|+++.+++++.      +.+...++ ..+... .  .|..+...+.+.+.+.
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAA------EALAAELR-AAGGEARVLVFDVSDEAAVRALIEAA   76 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHH------HHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHH
Confidence            356899999999999999999888999999999987764      11112233 333321 2  3444432333334332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|.+|.+.|.
T Consensus        77 ~~~~~~id~vi~~ag~   92 (246)
T PRK05653         77 VEAFGALDILVNNAGI   92 (246)
T ss_pred             HHHhCCCCEEEECCCc
Confidence            21  368999999875

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0042  Score=56.04  Aligned_cols=83  Identities=17%  Similarity=0.282  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--C-E--EEecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--D-D--AFNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~-~--vv~~~~~~~~~~~~~  230 (356)
                      .+.++||+||+|++|...+..+...|++|++++++.+..      +++.+.++ ..+.  . .  ..|..+..++.. +.
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~-~~   73 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQ------ENLLSQAT-QLNLQQNIKVQQLDVTDQNSIHN-FQ   73 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHH------HHHHHHHH-hcCCCCceeEEecCCCCHHHHHH-HH
Confidence            356899999999999999998888899999999887665      11112222 2221  1 1  234444323333 44


Q ss_pred             HhCC--CCccEEEeCCCc
Q 018404          231 RCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~  246 (356)
                      +...  +++|+++.|.|.
T Consensus        74 ~~~~~~~~id~vv~~ag~   91 (280)
T PRK06914         74 LVLKEIGRIDLLVNNAGY   91 (280)
T ss_pred             HHHHhcCCeeEEEECCcc
Confidence            3322  368999999874

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.0026  Score=56.55  Aligned_cols=85  Identities=16%  Similarity=0.215  Sum_probs=54.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKR  231 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~  231 (356)
                      ..+.+++|.||+|++|.+++..+...|++|++++++++..      +++.+.+. ..+..   ..+|..+...+...+.+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~   75 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERL------DEVAAEID-DLGRRALAVPTDITDEDQCANLVAL   75 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHH-HhCCceEEEecCCCCHHHHHHHHHH
Confidence            3567999999999999999999999999999999887654      12222222 22321   23344433233333333


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +.+|++|.+.|.
T Consensus        76 ~~~~~g~~d~vi~~ag~   92 (258)
T PRK07890         76 ALERFGRVDALVNNAFR   92 (258)
T ss_pred             HHHHcCCccEEEECCcc
Confidence            211  368999998873

>PRK06194 hypothetical protein; Provisional

Probab=97.11  E-value=0.0027  Score=57.56  Aligned_cols=83  Identities=13%  Similarity=0.265  Sum_probs=52.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEE--ecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAF--NYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv--~~~~~~~~~~~~~~~~  233 (356)
                      +.++||+||+|++|..+++.+...|++|++++++.+..      ++..+.+. ..+.. ..+  |..+.+++.+.+.+..
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~   78 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDAL------DRAVAELR-AQGAEVLGVRTDVSDAAQVEALADAAL   78 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHH------HHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            57899999999999999998888999999999876654      11112222 22332 112  3333213333333221


Q ss_pred             --CCCccEEEeCCCc
Q 018404          234 --PEGIDIYFEHVGG  246 (356)
Q Consensus       234 --~~~~d~vid~~g~  246 (356)
                        .+++|++|.+.|.
T Consensus        79 ~~~g~id~vi~~Ag~   93 (287)
T PRK06194         79 ERFGAVHLLFNNAGV   93 (287)
T ss_pred             HHcCCCCEEEECCCC
Confidence              1368999999885

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.09  E-value=0.0019  Score=58.16  Aligned_cols=102  Identities=21%  Similarity=0.239  Sum_probs=62.3

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCccc
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEEND  224 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~  224 (356)
                      .+.+.+++++|++||-+| + |.|-.++.+++..|++|++++.|+++.      +.+.+.++ +.|..  ..+...   +
T Consensus        53 ~~~~~~~l~~G~~vLDiG-c-GwG~~~~~~a~~~g~~v~gitlS~~Q~------~~a~~~~~-~~gl~~~v~v~~~---D  120 (273)
T PF02353_consen   53 LLCEKLGLKPGDRVLDIG-C-GWGGLAIYAAERYGCHVTGITLSEEQA------EYARERIR-EAGLEDRVEVRLQ---D  120 (273)
T ss_dssp             HHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHH------HHHHHHHH-CSTSSSTEEEEES----
T ss_pred             HHHHHhCCCCCCEEEEeC-C-CccHHHHHHHHHcCcEEEEEECCHHHH------HHHHHHHH-hcCCCCceEEEEe---e
Confidence            344567899999999999 4 488999999999999999999999887      22333444 55653  112222   2


Q ss_pred             HHHHHHHhCCCCccEEEe-----CCCc----hHHHHHHHhhccCCeEEEE
Q 018404          225 LDAALKRCFPEGIDIYFE-----HVGG----KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~  265 (356)
                      +    +++. +.+|.|+.     .+|.    ..+..+.+.|+|+|+++.-
T Consensus       121 ~----~~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  121 Y----RDLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             G----GG----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             c----cccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            2    1111 16888754     4543    3578889999999998743

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0029  Score=56.19  Aligned_cols=84  Identities=17%  Similarity=0.231  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|.||+|++|..+++.+...|++|+.++++.++.      .++.+.++ +.+.. .  ..|..+..++.+.+.+.
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~~   78 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG------EETVALIR-EAGGEALFVACDVTRDAEVKALVEQT   78 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            468999999999999999988888999999999987764      12223333 34432 1  23333321233333322


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|++|.+.|.
T Consensus        79 ~~~~g~id~li~~ag~   94 (253)
T PRK06172         79 IAAYGRLDYAFNNAGI   94 (253)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            1  1368999998874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.08  E-value=0.0063  Score=54.37  Aligned_cols=108  Identities=10%  Similarity=0.068  Sum_probs=66.0

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc-CCC---EEEecCCcccHHHHH
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFD---DAFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~---~vv~~~~~~~~~~~~  229 (356)
                      .+.+++|+||+  +++|.++++.+...|++|+.+.++....      +++ +.+.+++ +..   ..+|..+.++....+
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~------~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   78 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE------KEV-RELADTLEGQESLLLPCDVTSDEEITACF   78 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch------HHH-HHHHHHcCCCceEEEecCCCCHHHHHHHH
Confidence            46899999987  8999999998888999999887643211      111 3333243 211   123444432333333


Q ss_pred             HHhCC--CCccEEEeCCCch------------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          230 KRCFP--EGIDIYFEHVGGK------------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ++...  +++|+++.+.|..                              ..+.+++.+.++|+++.++...+
T Consensus        79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  151 (257)
T PRK08594         79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG  151 (257)
T ss_pred             HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence            33322  4799999987631                              01234556677899999887544

>PRK05717 oxidoreductase; Validated

Probab=97.08  E-value=0.0027  Score=56.45  Aligned_cols=81  Identities=17%  Similarity=0.207  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .|.+++|+||+|++|..++..+...|++|+.++++.++.          +.+.++++..   ...|..+..++...+.+.
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~----------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG----------SKVAKALGENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHH----------HHHHHHcCCceEEEEccCCCHHHHHHHHHHH
Confidence            367999999999999999999988999999998876654          3333244422   123444432333333333


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +.+|++|.+.|.
T Consensus        79 ~~~~g~id~li~~ag~   94 (255)
T PRK05717         79 LGQFGRLDALVCNAAI   94 (255)
T ss_pred             HHHhCCCCEEEECCCc
Confidence            22  368999998884

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0025  Score=56.58  Aligned_cols=80  Identities=16%  Similarity=0.228  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC----EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD----DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+||+|++|..+++.+...|++|+.++++.+..          +... +....    ...|..+...+...+.+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~----------~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA----------EVAA-QLLGGNAKGLVCDVSDSQSVEAAVAA   82 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HhhCCceEEEEecCCCHHHHHHHHHH
Confidence            467999999999999999999988999999999876643          3333 32211    12343332123333332


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|++|.+.|.
T Consensus        83 ~~~~~~~~d~vi~~ag~   99 (255)
T PRK06841         83 VISAFGRIDILVNSAGV   99 (255)
T ss_pred             HHHHhCCCCEEEECCCC
Confidence            211  368999999984

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.06  E-value=0.0029  Score=56.50  Aligned_cols=81  Identities=25%  Similarity=0.321  Sum_probs=52.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHHHHHHhC--C
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDAALKRCF--P  234 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~~~~--~  234 (356)
                      +++|+||++++|.++++.+...|++|+.+++++++.      +++.+.++ +.+...  ..|..+.+++.+.+.+..  .
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~   74 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENL------EKALKELK-EYGEVYAVKADLSDKDDLKNLVKEAWELL   74 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHH-hcCCceEEEcCCCCHHHHHHHHHHHHHhc
Confidence            689999999999999999988999999999887765      12223333 223212  234333323333333322  1


Q ss_pred             CCccEEEeCCCc
Q 018404          235 EGIDIYFEHVGG  246 (356)
Q Consensus       235 ~~~d~vid~~g~  246 (356)
                      +++|++|.+.|.
T Consensus        75 g~id~li~naG~   86 (259)
T PRK08340         75 GGIDALVWNAGN   86 (259)
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=97.05  E-value=0.011  Score=51.04  Aligned_cols=109  Identities=19%  Similarity=0.141  Sum_probs=77.0

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCC-ccc
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE-END  224 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~  224 (356)
                      |....+.....+||=+|  +++|+.++.+|..+.  .+++.+..++++.      +.+++.++ +.|.+..+..-. . +
T Consensus        51 L~~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~------~~A~~n~~-~ag~~~~i~~~~~g-d  120 (219)
T COG4122          51 LRLLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERA------EIARENLA-EAGVDDRIELLLGG-D  120 (219)
T ss_pred             HHHHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHH------HHHHHHHH-HcCCcceEEEEecC-c
Confidence            33456677888999998  788999999999885  5899999998876      33444455 667754222111 2 4


Q ss_pred             HHHHHHHhCCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          225 LDAALKRCFPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ..+.+.+...+.||.||--..-    ..+..+++.|++||.++.-.
T Consensus       121 al~~l~~~~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         121 ALDVLSRLLDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             HHHHHHhccCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            5556665334589999765543    37889999999999988543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.04  E-value=0.014  Score=49.75  Aligned_cols=82  Identities=26%  Similarity=0.340  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~  234 (356)
                      ++.+++|.||+|++|..++..+...|++|+.+.++.++.      +++.+.+.+.++... ..+..+.++..+.+.    
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~------~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----   96 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERA------QKAADSLRARFGEGVGAVETSDDAARAAAIK----   96 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH------HHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh----
Confidence            567999999999999999888888899999999887776      112222221223321 222222112223332    


Q ss_pred             CCccEEEeCCCchH
Q 018404          235 EGIDIYFEHVGGKM  248 (356)
Q Consensus       235 ~~~d~vid~~g~~~  248 (356)
                       ++|+||.++....
T Consensus        97 -~~diVi~at~~g~  109 (194)
T cd01078          97 -GADVVFAAGAAGV  109 (194)
T ss_pred             -cCCEEEECCCCCc
Confidence             4899999887644

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0036  Score=55.50  Aligned_cols=82  Identities=18%  Similarity=0.279  Sum_probs=53.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~~  233 (356)
                      +.+++|.||+|++|.+.++.+...|++|+.++++.++.      +++.+.+. +.+.. ..  +|..+..+..+.+.+..
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGC------QAVADAIV-AAGGKAEALACHIGEMEQIDALFAHIR   80 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999876654      12223333 23321 11  23333213333333322


Q ss_pred             C--CCccEEEeCCC
Q 018404          234 P--EGIDIYFEHVG  245 (356)
Q Consensus       234 ~--~~~d~vid~~g  245 (356)
                      .  +.+|+++.+.|
T Consensus        81 ~~~~~id~li~~ag   94 (252)
T PRK07035         81 ERHGRLDILVNNAA   94 (252)
T ss_pred             HHcCCCCEEEECCC
Confidence            1  36899999887

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.03  E-value=0.0097  Score=54.86  Aligned_cols=103  Identities=17%  Similarity=0.229  Sum_probs=68.8

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  227 (356)
                      ....++++++||..| +| .|..++.+++..+.  .|++++.+++..      +.+.+.++ +.|.+.+.....  +..+
T Consensus        74 ~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l------~~Ar~~l~-~~g~~nV~~i~g--D~~~  142 (322)
T PRK13943         74 EWVGLDKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKIC------EIAKRNVR-RLGIENVIFVCG--DGYY  142 (322)
T ss_pred             HhcCCCCCCEEEEEe-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCcEEEEeC--Chhh
Confidence            345688999999999 44 69999999998864  799999887765      11223333 566643322222  3222


Q ss_pred             HHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          228 ALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      .+.+.  +.+|+|+.+.|. .......+.|+++|+++..
T Consensus       143 ~~~~~--~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        143 GVPEF--APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             ccccc--CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            22211  369999998886 4455778899999998763

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.02  E-value=0.0053  Score=51.65  Aligned_cols=89  Identities=24%  Similarity=0.315  Sum_probs=65.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      -.|.+|.|+| .|.+|...+++++.+|++|++.+++....          .... ..+..    +.   ++.+.+.+   
T Consensus        34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~----------~~~~-~~~~~----~~---~l~ell~~---   91 (178)
T PF02826_consen   34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPE----------EGAD-EFGVE----YV---SLDELLAQ---   91 (178)
T ss_dssp             STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHH----------HHHH-HTTEE----ES---SHHHHHHH---
T ss_pred             cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChh----------hhcc-cccce----ee---ehhhhcch---
Confidence            3589999999 99999999999999999999999998774          3244 44431    11   45555654   


Q ss_pred             CCccEEEeCCCc-h-----HHHHHHHhhccCCeEEEEcc
Q 018404          235 EGIDIYFEHVGG-K-----MLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g~-~-----~~~~~~~~l~~~G~~v~~g~  267 (356)
                        .|+|+.+... +     .-...+..|+++..+|.++.
T Consensus        92 --aDiv~~~~plt~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen   92 --ADIVSLHLPLTPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             ---SEEEE-SSSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             --hhhhhhhhccccccceeeeeeeeeccccceEEEeccc
Confidence              7899887774 2     12577889999999988875

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.0037  Score=55.52  Aligned_cols=82  Identities=13%  Similarity=0.205  Sum_probs=52.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEE--ecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAF--NYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv--~~~~~~~~~~~~~~~~  233 (356)
                      |.+++|.||+|++|.+.++.+...|++|++++++.++.      +++.+.++ +.+.. ..+  |..+...+...+.+..
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKL------EEAKLEIE-QFPGQVLTVQMDVRNPEDVQKMVEQID   73 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999887665      11222233 22321 222  3333323333333322


Q ss_pred             C--CCccEEEeCCC
Q 018404          234 P--EGIDIYFEHVG  245 (356)
Q Consensus       234 ~--~~~d~vid~~g  245 (356)
                      .  +++|++|.+.|
T Consensus        74 ~~~~~id~lI~~ag   87 (252)
T PRK07677         74 EKFGRIDALINNAA   87 (252)
T ss_pred             HHhCCccEEEECCC
Confidence            1  36899999887

>PRK08643 acetoin reductase; Validated

Probab=97.02  E-value=0.0034  Score=55.82  Aligned_cols=83  Identities=14%  Similarity=0.140  Sum_probs=53.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~  233 (356)
                      +.+++|+||+|++|..+++.+...|++|+.++++.++.      +++...+. +.+..   ...|..+.+.+.+.+.+..
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~   74 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETA------QAAADKLS-KDGGKAIAVKADVSDRDQVFAAVRQVV   74 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            56899999999999999999999999999999887664      12222333 23322   1224433323333333322


Q ss_pred             C--CCccEEEeCCCc
Q 018404          234 P--EGIDIYFEHVGG  246 (356)
Q Consensus       234 ~--~~~d~vid~~g~  246 (356)
                      .  +++|++|.+.|.
T Consensus        75 ~~~~~id~vi~~ag~   89 (256)
T PRK08643         75 DTFGDLNVVVNNAGV   89 (256)
T ss_pred             HHcCCCCEEEECCCC
Confidence            1  369999999874

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.011  Score=53.85  Aligned_cols=110  Identities=15%  Similarity=0.168  Sum_probs=66.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      .++.++||+||+|++|..++..+...|++|+.+.++.+..     .+++.+.++ ..+...   ..|..+...+.+.+.+
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~-----~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~  117 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHED-----ANETKQRVE-KEGVKCLLIPGDVSDEAFCKDAVEE  117 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchH-----HHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHH
Confidence            3467999999999999999988888999999998775431     011112233 334321   2233332133333333


Q ss_pred             hCC--CCccEEEeCCCch---------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGGK---------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ...  +++|++|.+.|..                           .++.+++.++++|++|.++....
T Consensus       118 i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~  185 (290)
T PRK06701        118 TVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG  185 (290)
T ss_pred             HHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence            211  3689999988731                           11233445667789998887543

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.0038  Score=55.73  Aligned_cols=82  Identities=17%  Similarity=0.289  Sum_probs=53.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHhCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~~~  234 (356)
                      .+|||.||+|++|..+++.+...|++|++++++.+..      +++.+.++ ..+...   ..|..+...+...+.+...
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   74 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRL------ASLAQELA-DHGGEALVVPTDVSDAEACERLIEAAVA   74 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            5799999999999999999889999999999886654      11223333 333321   2233333233333333321


Q ss_pred             --CCccEEEeCCCc
Q 018404          235 --EGIDIYFEHVGG  246 (356)
Q Consensus       235 --~~~d~vid~~g~  246 (356)
                        +++|.+|.|.|.
T Consensus        75 ~~~~id~vi~~ag~   88 (263)
T PRK06181         75 RFGGIDILVNNAGI   88 (263)
T ss_pred             HcCCCCEEEECCCc
Confidence              368999999874

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0041  Score=55.42  Aligned_cols=80  Identities=15%  Similarity=0.179  Sum_probs=53.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC----CC-EEEecCCcccHHHHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG----FD-DAFNYKEENDLDAALKR  231 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~-~vv~~~~~~~~~~~~~~  231 (356)
                      +.+|+|+||+|++|..++..+...|++|+.++++.++.          +.+.+++.    .. ..+|..+.+++.+.+.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~   71 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDAL----------QAFAARLPKAARVSVYAADVRDADALAAAAAD   71 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHhcccCCeeEEEEcCCCCHHHHHHHHHH
Confidence            35899999999999999998888899999999887765          44332322    11 12344443234333333


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +.+|+++.+.|.
T Consensus        72 ~~~~~g~id~lv~~ag~   88 (257)
T PRK07024         72 FIAAHGLPDVVIANAGI   88 (257)
T ss_pred             HHHhCCCCCEEEECCCc
Confidence            322  358999998873

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0046  Score=53.77  Aligned_cols=78  Identities=15%  Similarity=0.171  Sum_probs=54.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      .+++|+||+|++|...++.+...|++|+.++++.+..          +.++ ..+.. ...|..+.+.+...+.+..+++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~----------~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~   70 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAAL----------AALQ-ALGAEALALDVADPASVAGLAWKLDGEA   70 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHH----------HHHH-hccceEEEecCCCHHHHHHHHHHhcCCC
Confidence            4799999999999999988878899999999887766          6665 45543 2344444323333333333337


Q ss_pred             ccEEEeCCCc
Q 018404          237 IDIYFEHVGG  246 (356)
Q Consensus       237 ~d~vid~~g~  246 (356)
                      +|++|.+.|.
T Consensus        71 ~d~vi~~ag~   80 (222)
T PRK06953         71 LDAAVYVAGV   80 (222)
T ss_pred             CCEEEECCCc
Confidence            9999998774

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.98  E-value=0.0033  Score=55.61  Aligned_cols=82  Identities=18%  Similarity=0.243  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.+++..+...|++|+.++++...        ++.+.++ +.+..   ...|..+..++...+.+.
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~--------~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPS--------ETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSA   74 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHH--------HHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHH
Confidence            47899999999999999999998999999999876422        1123444 44432   123444332344333333


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|+++.+.|.
T Consensus        75 ~~~~~~~d~li~~ag~   90 (248)
T TIGR01832        75 VEEFGHIDILVNNAGI   90 (248)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            21  369999998874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.98  E-value=0.0036  Score=57.91  Aligned_cols=80  Identities=13%  Similarity=0.140  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC---CC-E--EEecCCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG---FD-D--AFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~-~--vv~~~~~~~~~~~~  229 (356)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++.          +.+.+++.   .. .  .+|..+...+.+.+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~----------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   74 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKA----------EAAAQELGIPPDSYTIIHIDLGDLDSVRRFV   74 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhhccCCceEEEEecCCCHHHHHHHH
Confidence            467899999999999999998888899999999887765          33332332   11 1  23444332333333


Q ss_pred             HHhC--CCCccEEEeCCC
Q 018404          230 KRCF--PEGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~--~~~~d~vid~~g  245 (356)
                      .+..  .+++|++|++.|
T Consensus        75 ~~~~~~~~~iD~li~nAg   92 (322)
T PRK07453         75 DDFRALGKPLDALVCNAA   92 (322)
T ss_pred             HHHHHhCCCccEEEECCc
Confidence            3321  236999999987

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.96  E-value=0.013  Score=49.79  Aligned_cols=104  Identities=15%  Similarity=0.310  Sum_probs=72.9

Q ss_pred             CCEEEEec-CCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-CEEEecCCccc---HHHHHHH
Q 018404          157 GEYIYVSA-ASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DDAFNYKEEND---LDAALKR  231 (356)
Q Consensus       157 g~~VlI~g-a~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~---~~~~~~~  231 (356)
                      ...|||.| ++||+|.+...=....|+.|++++|+.+..          ..+..++|. ..-+|-.++++   +...++.
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M----------~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~   76 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPM----------AQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA   76 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchH----------hhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence            45788886 457999999888888899999999999987          555557886 34455544323   3445666


Q ss_pred             hCCCCccEEEeCCCch-----------HH---------------HHH-HHhhccCCeEEEEccccc
Q 018404          232 CFPEGIDIYFEHVGGK-----------ML---------------DAV-LLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~~~~d~vid~~g~~-----------~~---------------~~~-~~~l~~~G~~v~~g~~~~  270 (356)
                      .+.|..|+.++..|-.           ..               +.. ....+..|++|.+|...+
T Consensus        77 ~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~  142 (289)
T KOG1209|consen   77 NPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG  142 (289)
T ss_pred             CCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence            6667999999977731           11               111 224577899999998654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.96  E-value=0.0049  Score=54.91  Aligned_cols=84  Identities=23%  Similarity=0.328  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|..+++.+...|++|+.++++.++.      +++...++ ..+..   ...|..+...+.+.+.+.
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~i~-~~~~~~~~~~~Dl~d~~~i~~~~~~~   83 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEEL------EEAAAHLE-ALGIDALWIAADVADEADIERLAEET   83 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999988999999999887665      11112222 22321   123444432333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|.+|.+.|.
T Consensus        84 ~~~~~~id~vi~~ag~   99 (259)
T PRK08213         84 LERFGHVDILVNNAGA   99 (259)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            11  368999999873

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.96  E-value=0.0041  Score=55.28  Aligned_cols=82  Identities=16%  Similarity=0.238  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||++++|.++++.+...|++|+++.++...        ++.+.++ +.+..   ..+|..+.+++.+.+.+.
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~--------~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAP--------ETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQA   77 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHH--------HHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999988765322        1113344 44432   123444432333333332


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|+++.+.|.
T Consensus        78 ~~~~g~iD~lv~~ag~   93 (251)
T PRK12481         78 VEVMGHIDILINNAGI   93 (251)
T ss_pred             HHHcCCCCEEEECCCc
Confidence            2  1369999999883

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.95  E-value=0.0057  Score=54.66  Aligned_cols=111  Identities=12%  Similarity=0.084  Sum_probs=65.8

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~  231 (356)
                      .+.+++|+||+  +++|.+++..+...|++|+.+.++.++.+   ..+.+ +.+.++.+..  ..+|..+.++..+.+.+
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGR---FEKKV-RELTEPLNPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccch---HHHHH-HHHHhccCcceEeecCcCCHHHHHHHHHH
Confidence            46899999975  79999999999899999988765433210   00111 3333122211  12344443233333333


Q ss_pred             hCC--CCccEEEeCCCch-------H-----------------------HHHHHHhhccCCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGGK-------M-----------------------LDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~-------~-----------------------~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ...  +.+|+++.+.|..       .                       .+.+++.|+.+|+++.++....
T Consensus        81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~  151 (258)
T PRK07370         81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG  151 (258)
T ss_pred             HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence            221  3799999988731       0                       1345666777899998877543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=96.95  E-value=0.0072  Score=54.40  Aligned_cols=82  Identities=23%  Similarity=0.304  Sum_probs=56.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCC------EEEecCCccc-
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFD------DAFNYKEEND-  224 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~------~vv~~~~~~~-  224 (356)
                      -.|..++|+|+++|+|.+.+..+...|++|+.+.+++++.          +....   ..+..      .+.|..+..+ 
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~----------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   75 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERL----------EETAQELGGLGYTGGKVLAIVCDVSKEVDV   75 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHHHhcCCCCCeeEEEECcCCCHHHH
Confidence            3578999999999999999999999999999999998876          33331   22221      2233333212 


Q ss_pred             --HHHHHHHhCCCCccEEEeCCCc
Q 018404          225 --LDAALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       225 --~~~~~~~~~~~~~d~vid~~g~  246 (356)
                        +.+...+...|++|+++++.|.
T Consensus        76 ~~l~~~~~~~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   76 EKLVEFAVEKFFGKIDILVNNAGA   99 (270)
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCc
Confidence              2222333334579999998884

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0055  Score=53.93  Aligned_cols=85  Identities=13%  Similarity=0.188  Sum_probs=54.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKR  231 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~  231 (356)
                      ..+.+++|.||+|++|..++..+...|++|++++++.++.      +++.+.++ +.+.. .  ..|..+.+.+.+.+.+
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~   76 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDAL------EALAAELR-STGVKAAAYSIDLSNPEAIAPGIAE   76 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hCCCcEEEEEccCCCHHHHHHHHHH
Confidence            3467899999999999999999999999999999887665      11222222 22321 1  2233332233333333


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|+++.+.|.
T Consensus        77 ~~~~~~~id~lv~~ag~   93 (241)
T PRK07454         77 LLEQFGCPDVLINNAGM   93 (241)
T ss_pred             HHHHcCCCCEEEECCCc
Confidence            221  369999999984

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.95  E-value=0.005  Score=54.05  Aligned_cols=80  Identities=13%  Similarity=0.148  Sum_probs=53.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCC-
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFP-  234 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~-  234 (356)
                      +.+++|+||+|++|.++++.+...|++|+.++++.+..         .+.++ ..+.. ...|..+.++....+.+... 
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---------~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   71 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA---------IDGLR-QAGAQCIQADFSTNAGIMAFIDELKQH   71 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH---------HHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence            45899999999999999999888999999999876542         14444 45542 12343332233333333322 


Q ss_pred             -CCccEEEeCCCc
Q 018404          235 -EGIDIYFEHVGG  246 (356)
Q Consensus       235 -~~~d~vid~~g~  246 (356)
                       +++|+++.+.|.
T Consensus        72 ~~~id~lv~~ag~   84 (236)
T PRK06483         72 TDGLRAIIHNASD   84 (236)
T ss_pred             CCCccEEEECCcc
Confidence             368999998873

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.94  E-value=0.011  Score=52.18  Aligned_cols=84  Identities=24%  Similarity=0.299  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-chhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-EKVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+|++|++|..+++.+...|++|++..+.. .+.      .+..+.++ ..+....   .|..+.+++.+.+.+
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~   74 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRR------VKWLEDQK-ALGFDFIASEGNVGDWDSTKAAFDK   74 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHH------HHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            367899999999999999999999999988865432 221      01112233 3344322   344333233333333


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|+++.+.|.
T Consensus        75 ~~~~~~~id~li~~ag~   91 (246)
T PRK12938         75 VKAEVGEIDVLVNNAGI   91 (246)
T ss_pred             HHHHhCCCCEEEECCCC
Confidence            221  379999999984

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.0044  Score=54.08  Aligned_cols=76  Identities=13%  Similarity=0.165  Sum_probs=52.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +++|+||+|++|.+.++.+...|++|+.+.++.++.          +.+.++.+... ..|..+.+++.+.+.+.. +.+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~----------~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~i   70 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDL----------EVAAKELDVDAIVCDNTDPASLEEARGLFP-HHL   70 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcC
Confidence            589999999999999999988999999999887776          54442444432 234444323333333332 258


Q ss_pred             cEEEeCCC
Q 018404          238 DIYFEHVG  245 (356)
Q Consensus       238 d~vid~~g  245 (356)
                      |+++.+.|
T Consensus        71 d~lv~~ag   78 (223)
T PRK05884         71 DTIVNVPA   78 (223)
T ss_pred             cEEEECCC
Confidence            99998865

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.0055  Score=55.68  Aligned_cols=85  Identities=15%  Similarity=0.180  Sum_probs=53.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc---------chhccccchhHHHHHHHhhcCCCE---EEecCCc
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR---------EKVWLIPMQSQLVELLKNKFGFDD---AFNYKEE  222 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~  222 (356)
                      .++.+++|+||++++|.+.++.+...|++|++++++.         ++.      +++.+.++ ..+...   .+|..+.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~------~~~~~~l~-~~~~~~~~~~~Dv~~~   76 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAA------QAVVDEIV-AAGGEAVANGDDIADW   76 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHH------HHHHHHHH-hcCCceEEEeCCCCCH
Confidence            4578999999999999999998888999999887654         222      22223333 334321   1244433


Q ss_pred             ccHHHHHHHhC--CCCccEEEeCCCc
Q 018404          223 NDLDAALKRCF--PEGIDIYFEHVGG  246 (356)
Q Consensus       223 ~~~~~~~~~~~--~~~~d~vid~~g~  246 (356)
                      ++..+.+.+..  .+.+|++|.+.|.
T Consensus        77 ~~v~~~~~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         77 DGAANLVDAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCC
Confidence            23333333322  1479999999884

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.93  E-value=0.0074  Score=57.19  Aligned_cols=108  Identities=18%  Similarity=0.130  Sum_probs=73.1

Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      +-...+..+.....+++|++||-+| + |.|..+..+++..|++|++++.+++..          +.+++.. ....++.
T Consensus       151 Aq~~k~~~l~~~l~l~~g~rVLDIG-c-G~G~~a~~la~~~g~~V~giDlS~~~l----------~~A~~~~-~~l~v~~  217 (383)
T PRK11705        151 AQEAKLDLICRKLQLKPGMRVLDIG-C-GWGGLARYAAEHYGVSVVGVTISAEQQ----------KLAQERC-AGLPVEI  217 (383)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEeC-C-CccHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHh-ccCeEEE
Confidence            3344455555667789999999999 4 678888999998999999999999987          7666322 1111221


Q ss_pred             CCcccHHHHHHHhCCCCccEEEe-----CCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          220 KEENDLDAALKRCFPEGIDIYFE-----HVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ... ++.    +. .+.+|.|+.     .+|.    ..++.+.+.|+|+|.++...
T Consensus       218 ~~~-D~~----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        218 RLQ-DYR----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             EEC-chh----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            111 222    11 246898864     3343    35788899999999988643

>PLN02253 xanthoxin dehydrogenase

Probab=96.92  E-value=0.0046  Score=55.86  Aligned_cols=81  Identities=15%  Similarity=0.138  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC----C-EEEecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF----D-DAFNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~-~vv~~~~~~~~~~~~~  230 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.+..          +.+.++++.    . ...|..+.+.+.+.+.
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   86 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLG----------QNVCDSLGGEPNVCFFHCDVTVEDDVSRAVD   86 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHHHHhcCCCceEEEEeecCCHHHHHHHHH
Confidence            367999999999999999988888999999998876554          333223321    1 1234444323333333


Q ss_pred             HhCC--CCccEEEeCCCc
Q 018404          231 RCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~  246 (356)
                      +...  +++|++|.+.|.
T Consensus        87 ~~~~~~g~id~li~~Ag~  104 (280)
T PLN02253         87 FTVDKFGTLDIMVNNAGL  104 (280)
T ss_pred             HHHHHhCCCCEEEECCCc
Confidence            2211  369999998874

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.92  E-value=0.0036  Score=53.97  Aligned_cols=102  Identities=19%  Similarity=0.214  Sum_probs=66.0

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLD  226 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~  226 (356)
                      +..++++|++||-.|  +|.|+.++-+++..|.  +|+.+...++-.      +++.+.+. .++.+.+ +...+.   .
T Consensus        66 ~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~------~~A~~~l~-~~~~~nv~~~~gdg---~  133 (209)
T PF01135_consen   66 EALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELA------ERARRNLA-RLGIDNVEVVVGDG---S  133 (209)
T ss_dssp             HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHH------HHHHHHHH-HHTTHSEEEEES-G---G
T ss_pred             HHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHH------HHHHHHHH-HhccCceeEEEcch---h
Confidence            456799999999998  5678888888888875  788888776644      33445555 6666422 222221   1


Q ss_pred             HHHHHhCCCCccEEEeCCCch-HHHHHHHhhccCCeEEEE
Q 018404          227 AALKRCFPEGIDIYFEHVGGK-MLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  265 (356)
                      .-+.+  .++||.|+-+.+-. .-...++.|+++|++|..
T Consensus       134 ~g~~~--~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  134 EGWPE--EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             GTTGG--G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             hcccc--CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            11111  13799999888874 446888999999999973

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.92  E-value=0.0047  Score=54.30  Aligned_cols=84  Identities=19%  Similarity=0.268  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|.|++|++|..++..+...|++|+.++++.++.      +++.+.+. ..+.. ..  .|..+.+.+.+.+++.
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL------KAVAEEVE-AYGVKVVIATADVSDYEEVTAAIEQL   78 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-HhCCeEEEEECCCCCHHHHHHHHHHH
Confidence            357899999999999999998888999999999887654      12222333 33322 11  2333322344444433


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        79 ~~~~~~id~vi~~ag~   94 (239)
T PRK07666         79 KNELGSIDILINNAGI   94 (239)
T ss_pred             HHHcCCccEEEEcCcc
Confidence            22  378999998874

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.015  Score=51.59  Aligned_cols=108  Identities=19%  Similarity=0.208  Sum_probs=64.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCcchhccccchhHHHHHHHhhcCCC-E--EEecCCccc---HHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEEND---LDAA  228 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~---~~~~  228 (356)
                      .+.+++|+||+|++|.++++.+...|++|+... ++.++.      +++...++ ..+.. .  ..|..+.++   +.+.
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~   75 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA------EETVYEIQ-SNGGSAFSIGANLESLHGVEALYSS   75 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHH------HHHHHHHH-hcCCceEEEecccCCHHHHHHHHHH
Confidence            467999999999999999999999999998875 333333      11112233 22321 1  123322212   2222


Q ss_pred             HHH----hCC-CCccEEEeCCCch-----------H---------------HHHHHHhhccCCeEEEEccccc
Q 018404          229 LKR----CFP-EGIDIYFEHVGGK-----------M---------------LDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       229 ~~~----~~~-~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      +.+    ..+ +++|+++.+.|..           .               .+.+++.+++.|+++.++....
T Consensus        76 ~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         76 LDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             HHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence            222    112 2799999988831           0               1235556677899999987654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.92  E-value=0.0055  Score=54.58  Aligned_cols=83  Identities=16%  Similarity=0.206  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.+.++.+...|++|++++++ ++.      +++.+.+. +.+..   ..+|..+.......+.+.
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~~   85 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNW------DETRRLIE-KEGRKVTFVQVDLTKPESAEKVVKEA   85 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHH------HHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999887 332      12223333 33432   123444332333333332


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|++|.+.|.
T Consensus        86 ~~~~g~id~li~~ag~  101 (258)
T PRK06935         86 LEEFGKIDILVNNAGT  101 (258)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            2  1368999998873

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0053  Score=56.29  Aligned_cols=108  Identities=15%  Similarity=0.104  Sum_probs=66.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC-CC-E--EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG-FD-D--AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~-~--vv~~~~~~~~~~~~~~  231 (356)
                      .+.+|+|+||+|++|.++++.+...|++|+.++++.++.      +++.+.+....+ .. .  .+|..+..++...+.+
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~   88 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKG------KAAAARITAATPGADVTLQELDLTSLASVRAAADA   88 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHH
Confidence            568999999999999999998888899999999887664      111122221221 11 1  2344333233333333


Q ss_pred             hCC--CCccEEEeCCCch-------------H-----------HHHHHHhhcc--CCeEEEEcccc
Q 018404          232 CFP--EGIDIYFEHVGGK-------------M-----------LDAVLLNMRL--HGRIAACGMIS  269 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~-------------~-----------~~~~~~~l~~--~G~~v~~g~~~  269 (356)
                      ...  +++|++|.+.|..             .           ...+++.+..  +|++|.++...
T Consensus        89 ~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~  154 (306)
T PRK06197         89 LRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGG  154 (306)
T ss_pred             HHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHH
Confidence            322  3699999998730             0           2344555543  47999887643

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.91  E-value=0.0049  Score=55.61  Aligned_cols=83  Identities=19%  Similarity=0.250  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|.+.++.+...|++|++++++.+..      +++.+.++ ..+.. .  ..|..+...+...+.+.
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKA------EAVVAEIK-AAGGEALAVKADVLDKESLEQARQQI   81 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999886654      22223333 33322 1  22333321233333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        82 ~~~~g~id~li~~ag   96 (278)
T PRK08277         82 LEDFGPCDILINGAG   96 (278)
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  37999999987

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.90  E-value=0.018  Score=50.60  Aligned_cols=85  Identities=22%  Similarity=0.299  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEE--ecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAF--NYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv--~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+|++|++|...+..+...|++|+++.++....     .....+.++ ..+.. ..+  |..+.+.+.+.+.+.
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAG-----AEALVAEIG-ALGGKALAVQGDVSDAESVERAVDEA   77 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhH-----HHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            356899999999999999999999999998887765421     011112233 23332 122  443332333333333


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|.+|.+.|.
T Consensus        78 ~~~~~~id~vi~~ag~   93 (248)
T PRK05557         78 KAEFGGVDILVNNAGI   93 (248)
T ss_pred             HHHcCCCCEEEECCCc
Confidence            22  268999998874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.89  E-value=0.0045  Score=55.11  Aligned_cols=79  Identities=19%  Similarity=0.283  Sum_probs=53.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~~  233 (356)
                      +.+++|+||+|++|..+++.+...|++|+.++++.++.          +.+.++.+.. .  ..|..+.......+.+..
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARA----------RLAALEIGPAAIAVSLDVTRQDSIDRIVAAAV   75 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHH----------HHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999887765          4444233321 1  223333213333333321


Q ss_pred             --CCCccEEEeCCC
Q 018404          234 --PEGIDIYFEHVG  245 (356)
Q Consensus       234 --~~~~d~vid~~g  245 (356)
                        .+++|+++.+.|
T Consensus        76 ~~~~~id~li~~ag   89 (257)
T PRK07067         76 ERFGGIDILFNNAA   89 (257)
T ss_pred             HHcCCCCEEEECCC
Confidence              136899999887

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.0055  Score=56.31  Aligned_cols=89  Identities=17%  Similarity=0.132  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh----ccccchhHHHHHHHhhcCCC---EEEecCCcccHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV----WLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAA  228 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~  228 (356)
                      .+.+++|+||++|+|.++++.+...|++|+.++++....    ...+..+++.+.++ ..|..   ...|..+..+....
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVT-AAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHH
Confidence            478999999999999999999999999999998874210    00011123334444 44432   12343333233333


Q ss_pred             HHHhCC--CCccEEEeCC-C
Q 018404          229 LKRCFP--EGIDIYFEHV-G  245 (356)
Q Consensus       229 ~~~~~~--~~~d~vid~~-g  245 (356)
                      +.+...  +.+|++|.+. |
T Consensus        86 ~~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHHcCCccEEEECCcc
Confidence            333221  3699999988 5

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.0041  Score=55.04  Aligned_cols=84  Identities=17%  Similarity=0.173  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|..+++.+...|++|+.+.++++..      .++.+.++ +.+..   ...|..+...+.+.+.+.
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGA------ERVAKQIV-ADGGTAIAVQVDVSDPDSAKAMADAT   77 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            467899999999999999998888999999999886654      11122232 22221   123444331222222222


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        78 ~~~~~~id~vi~~ag~   93 (250)
T PRK07774         78 VSAFGGIDYLVNNAAI   93 (250)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            11  268999998883

>PRK06720 hypothetical protein; Provisional

Probab=96.89  E-value=0.0077  Score=50.21  Aligned_cols=83  Identities=17%  Similarity=0.282  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|.||++++|...+..+...|++|+.+.++.+..      ++..+.++ +.+.. .  ..|..+.+++.+.+.+.
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dl~~~~~v~~~v~~~   87 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESG------QATVEEIT-NLGGEALFVSYDMEKQGDWQRVISIT   87 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            477999999999999999998888999999999876554      11222333 33432 1  22333221233322221


Q ss_pred             C--CCCccEEEeCCC
Q 018404          233 F--PEGIDIYFEHVG  245 (356)
Q Consensus       233 ~--~~~~d~vid~~g  245 (356)
                      .  .+++|+++.+.|
T Consensus        88 ~~~~G~iDilVnnAG  102 (169)
T PRK06720         88 LNAFSRIDMLFQNAG  102 (169)
T ss_pred             HHHcCCCCEEEECCC
Confidence            1  146899998888

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.0067  Score=53.92  Aligned_cols=85  Identities=19%  Similarity=0.167  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||++++|.++++.+...|++|++++++.+..     .+++.+.++ ..+.. .  ..|..+.+++.+.+.+.
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~l~-~~~~~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDG-----LAETAEHIE-AAGRRAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchH-----HHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999998765421     011223333 33432 1  22333332333333332


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+.+|++|.+.|.
T Consensus        81 ~~~~g~id~li~~ag~   96 (254)
T PRK06114         81 EAELGALTLAVNAAGI   96 (254)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            2  1368999999984

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.007  Score=53.20  Aligned_cols=84  Identities=18%  Similarity=0.239  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC----CEEEecCC---c--ccHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF----DDAFNYKE---E--NDLD  226 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~~vv~~~~---~--~~~~  226 (356)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.      +++.+.+. +.+.    ...+|..+   .  ..+.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL------EKVYDAIV-EAGHPEPFAIRFDLMSAEEKEFEQFA   77 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHH------HHHHHHHH-HcCCCCcceEEeeecccchHHHHHHH
Confidence            467999999999999999999988999999999988765      22223332 2221    11233321   1  1223


Q ss_pred             HHHHHhCCCCccEEEeCCCc
Q 018404          227 AALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~  246 (356)
                      +.+.+...+.+|.+|.+.|.
T Consensus        78 ~~i~~~~~~~id~vi~~ag~   97 (239)
T PRK08703         78 ATIAEATQGKLDGIVHCAGY   97 (239)
T ss_pred             HHHHHHhCCCCCEEEEeccc
Confidence            33444333468999999883

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.0045  Score=54.73  Aligned_cols=83  Identities=16%  Similarity=0.248  Sum_probs=52.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc-CCC-E--EEecCCcccHHHHHHHh
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      +.+++|+||+|++|...++.+...|++|+.++++.++.      +++...+.+.. +.. .  .+|..+...+.+.+.+.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   75 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRL------EELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEF   75 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHH
Confidence            46899999999999999988888899999999887765      11222222111 221 1  23444432333334333


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        76 ~~~~~~id~vi~~ag   90 (248)
T PRK08251         76 RDELGGLDRVIVNAG   90 (248)
T ss_pred             HHHcCCCCEEEECCC
Confidence            22  37999999887

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.0038  Score=55.23  Aligned_cols=81  Identities=17%  Similarity=0.187  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc--CCC-EE--EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF--GFD-DA--FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~-~v--v~~~~~~~~~~~~~  230 (356)
                      ++.+++|+||+|++|..+++.+...|++|+.+.++.+..          +...+..  +.. ..  .|..+.....+.+.
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   73 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA----------ERVAAAIAAGGRAFARQGDVGSAEAVEALVD   73 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHH----------HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            367999999999999999988888899999999887654          3222122  221 12  23333213333333


Q ss_pred             HhCC--CCccEEEeCCCc
Q 018404          231 RCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~  246 (356)
                      +...  +++|++|.+.|.
T Consensus        74 ~i~~~~~~id~vi~~ag~   91 (252)
T PRK06138         74 FVAARWGRLDVLVNNAGF   91 (252)
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            3221  379999999884

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.83  E-value=0.0067  Score=54.15  Aligned_cols=84  Identities=18%  Similarity=0.279  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-chhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-EKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~  231 (356)
                      ++++++|+||++++|.+++..+...|++|+.+.++. ++.      +++.+.++...+..   ..+|..+.+++.+.+.+
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEA------NKIAEDLEQKYGIKAKAYPLNILEPETYKELFKK   80 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            478999999999999999999999999998876543 332      11112233123432   12344443233333333


Q ss_pred             hC--CCCccEEEeCCC
Q 018404          232 CF--PEGIDIYFEHVG  245 (356)
Q Consensus       232 ~~--~~~~d~vid~~g  245 (356)
                      ..  .+.+|+++.+.|
T Consensus        81 ~~~~~g~id~lv~nAg   96 (260)
T PRK08416         81 IDEDFDRVDFFISNAI   96 (260)
T ss_pred             HHHhcCCccEEEECcc
Confidence            22  136899999875

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.0053  Score=55.30  Aligned_cols=79  Identities=18%  Similarity=0.275  Sum_probs=53.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhC-
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCF-  233 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~-  233 (356)
                      .++||+||+|++|..+++.+...|++|+++.++.++.          +.+++..+..   ...|..+.+.+.+.+.+.. 
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDAL----------DDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA   72 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHhccCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4799999999999999988888999999999987776          5555233321   1234443323333333321 


Q ss_pred             -CCCccEEEeCCCc
Q 018404          234 -PEGIDIYFEHVGG  246 (356)
Q Consensus       234 -~~~~d~vid~~g~  246 (356)
                       .+++|++|.+.|.
T Consensus        73 ~~~~id~vi~~ag~   86 (276)
T PRK06482         73 ALGRIDVVVSNAGY   86 (276)
T ss_pred             HcCCCCEEEECCCC
Confidence             1368999999873

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.0061  Score=54.23  Aligned_cols=83  Identities=14%  Similarity=0.159  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|..+++.+...|++|+.++++++..       ++.+.++ +.+..   ...|..+.+.+...+.+.
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-------~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-------EFAEELR-ALQPRAEFVQVDLTDDAQCRDAVEQT   77 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-------HHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHH
Confidence            467999999999999999988888999999998876653       1123333 33432   123333322333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        78 ~~~~~~id~vi~~ag~   93 (258)
T PRK08628         78 VAKFGRIDGLVNNAGV   93 (258)
T ss_pred             HHhcCCCCEEEECCcc
Confidence            21  378999999983

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.83  E-value=0.0072  Score=53.75  Aligned_cols=84  Identities=19%  Similarity=0.309  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+|+|.||++++|..++..+...|++|+.++++.+..      +++.+.++ +.+.. .  ..|..+.++..+.+.+.
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~D~~~~~~i~~~~~~~   82 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA------NHVVDEIQ-QLGGQAFACRCDITSEQELSALADFA   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            368999999999999999998889999999998876654      22223333 33332 1  23444432333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|+++.+.|.
T Consensus        83 ~~~~~~~d~li~~ag~   98 (255)
T PRK06113         83 LSKLGKVDILVNNAGG   98 (255)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            11  368999998873

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.82  E-value=0.0074  Score=54.02  Aligned_cols=84  Identities=19%  Similarity=0.259  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||++++|.+++..+...|++|+.+.++.++.      +++.+.++ +.+..   ...|..+.......+.+.
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELV------DKGLAAYR-ELGIEAHGYVCDVTDEDGVQAMVSQI   81 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH------HHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999988888999999998887664      12223333 33432   123443332333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        82 ~~~~~~id~li~~ag~   97 (265)
T PRK07097         82 EKEVGVIDILVNNAGI   97 (265)
T ss_pred             HHhCCCCCEEEECCCC
Confidence            21  368999999884

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.0077  Score=53.69  Aligned_cols=83  Identities=18%  Similarity=0.313  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|.|+++++|...++.+...|++|++++++.++.      +++.+.++...+.. ..  .|..+.+++.+.+.+.
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADAL------EALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA   79 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh
Confidence            468999999999999999998888999999999887765      12222233112321 12  2333332333333332


Q ss_pred             CCCCccEEEeCCCc
Q 018404          233 FPEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~~~~d~vid~~g~  246 (356)
                        +.+|++|.+.|.
T Consensus        80 --g~id~lv~~ag~   91 (259)
T PRK06125         80 --GDIDILVNNAGA   91 (259)
T ss_pred             --CCCCEEEECCCC
Confidence              469999999873

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.80  E-value=0.019  Score=49.75  Aligned_cols=101  Identities=17%  Similarity=0.195  Sum_probs=66.1

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDL  225 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~  225 (356)
                      ....++++++||-.|  .|.|..+..+++..+  .+|++++.+++-.      +.+.+.++ +.|...  ++..+.    
T Consensus        70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~------~~a~~~l~-~~g~~~v~~~~gd~----  136 (212)
T PRK13942         70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELA------EKAKKTLK-KLGYDNVEVIVGDG----  136 (212)
T ss_pred             HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHH------HHHHHHHH-HcCCCCeEEEECCc----
Confidence            456789999999998  566888888888875  5999999988766      22223333 445432  222211    


Q ss_pred             HHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          226 DAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       226 ~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      .....  ..+.+|+|+-.... ......++.|+++|+++..
T Consensus       137 ~~~~~--~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        137 TLGYE--ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             ccCCC--cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            11110  12379999765444 5567888999999998764

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=96.80  E-value=0.02  Score=47.87  Aligned_cols=102  Identities=22%  Similarity=0.288  Sum_probs=67.1

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALK  230 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~  230 (356)
                      .++++|++++=.|+  |.|-.++++++.. ..+||+++++++..      +...+.++ +||.+.+..-..  +.-+.+.
T Consensus        30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~------~~~~~N~~-~fg~~n~~vv~g--~Ap~~L~   98 (187)
T COG2242          30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEAL------ELIERNAA-RFGVDNLEVVEG--DAPEALP   98 (187)
T ss_pred             hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHH------HHHHHHHH-HhCCCcEEEEec--cchHhhc
Confidence            46889998777773  4577778888555 56999999998876      22223334 788753322111  2222333


Q ss_pred             HhCCCCccEEEeCCCc---hHHHHHHHhhccCCeEEEEc
Q 018404          231 RCFPEGIDIYFEHVGG---KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       231 ~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +..  .+|.+|---|.   ..++.+|..|+++|++|.-.
T Consensus        99 ~~~--~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na  135 (187)
T COG2242          99 DLP--SPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA  135 (187)
T ss_pred             CCC--CCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence            221  58999965554   37789999999999998653

>PRK06398 aldose dehydrogenase; Validated

Probab=96.79  E-value=0.0042  Score=55.46  Aligned_cols=75  Identities=16%  Similarity=0.159  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP-  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~-  234 (356)
                      .|.++||+||++++|.+++..+...|++|+.++++....          ..+.     ...+|..+..++.+.+.+... 
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------~~~~-----~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------NDVD-----YFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------CceE-----EEEccCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999998876543          2111     112344443233333333321 


Q ss_pred             -CCccEEEeCCC
Q 018404          235 -EGIDIYFEHVG  245 (356)
Q Consensus       235 -~~~d~vid~~g  245 (356)
                       +.+|++|.+.|
T Consensus        70 ~~~id~li~~Ag   81 (258)
T PRK06398         70 YGRIDILVNNAG   81 (258)
T ss_pred             cCCCCEEEECCC
Confidence             36899999887

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=96.79  E-value=0.013  Score=53.80  Aligned_cols=38  Identities=8%  Similarity=0.187  Sum_probs=32.4

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAA--SGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga--~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      .|.++||+||  ++|+|.++++.+...|++|+. .+...++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            4889999999  799999999999999999988 5554443

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.011  Score=52.49  Aligned_cols=35  Identities=31%  Similarity=0.488  Sum_probs=32.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      +.+++|+||+|++|.++++.+...|++|++++++.
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~   48 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK   48 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence            67999999999999999999999999999998876

>PLN02476 O-methyltransferase

Probab=96.79  E-value=0.019  Score=51.66  Aligned_cols=109  Identities=14%  Similarity=0.085  Sum_probs=74.6

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL  225 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  225 (356)
                      +..+.+..+..+||=+|  +++|..++.+|+.+  +.+|+.++.+++..      +.+.+.++ +.|...-++.... +.
T Consensus       110 L~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~------~~Ar~n~~-~aGl~~~I~li~G-dA  179 (278)
T PLN02476        110 LAMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSL------EVAKRYYE-LAGVSHKVNVKHG-LA  179 (278)
T ss_pred             HHHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCcEEEEEc-CH
Confidence            44456677788999998  68899999999987  45899999888775      33444555 6677533333333 44


Q ss_pred             HHHHHHhC----CCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          226 DAALKRCF----PEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       226 ~~~~~~~~----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .+.+.++.    .+.||.||--...    ..+..+++.|++||.++.=.
T Consensus       180 ~e~L~~l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DN  228 (278)
T PLN02476        180 AESLKSMIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDN  228 (278)
T ss_pred             HHHHHHHHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEec
Confidence            45554431    2379998765553    36688899999999987543

>PRK07069 short chain dehydrogenase; Validated

Probab=96.78  E-value=0.013  Score=51.87  Aligned_cols=82  Identities=13%  Similarity=0.238  Sum_probs=50.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-cchhccccchhHHHHHHHhhcCCC----EEEecCCcccHHHHHHHhC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-REKVWLIPMQSQLVELLKNKFGFD----DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~~~~~  233 (356)
                      +++|+||+|++|...++.+...|++|+++.++ .++.      .++.+.+.+..+..    ...|..+.+.+...+.+..
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   74 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGL------DAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAA   74 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHH------HHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHH
Confidence            38999999999999999888889999999987 4443      11222232111221    1224444323333333322


Q ss_pred             C--CCccEEEeCCCc
Q 018404          234 P--EGIDIYFEHVGG  246 (356)
Q Consensus       234 ~--~~~d~vid~~g~  246 (356)
                      .  +++|++|.+.|.
T Consensus        75 ~~~~~id~vi~~ag~   89 (251)
T PRK07069         75 DAMGGLSVLVNNAGV   89 (251)
T ss_pred             HHcCCccEEEECCCc
Confidence            1  368999999883

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.76  E-value=0.011  Score=55.39  Aligned_cols=93  Identities=17%  Similarity=0.124  Sum_probs=66.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcC---C-CEEEecCCcccHHHHHHHh
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFG---F-DDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g---~-~~vv~~~~~~~~~~~~~~~  232 (356)
                      .+|||+| +|++|..+++.+.+.+ .+|++.+++.++.          +.+. ...   . ...+|-.+.+.+.+.|++ 
T Consensus         2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~----------~~i~-~~~~~~v~~~~vD~~d~~al~~li~~-   68 (389)
T COG1748           2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKC----------ARIA-ELIGGKVEALQVDAADVDALVALIKD-   68 (389)
T ss_pred             CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHH----------HHHH-hhccccceeEEecccChHHHHHHHhc-
Confidence            4789999 6999999999988888 7999999999988          6665 332   2 345666553234444443 


Q ss_pred             CCCCccEEEeCCCchHHHHHH-HhhccCCeEEEEcc
Q 018404          233 FPEGIDIYFEHVGGKMLDAVL-LNMRLHGRIAACGM  267 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~~~~~~-~~l~~~G~~v~~g~  267 (356)
                          +|+||+|.....-..++ .|++.+=.++.+..
T Consensus        69 ----~d~VIn~~p~~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          69 ----FDLVINAAPPFVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             ----CCEEEEeCCchhhHHHHHHHHHhCCCEEEccc
Confidence                69999999985444444 56666667777655

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.75  E-value=0.0089  Score=48.92  Aligned_cols=100  Identities=20%  Similarity=0.244  Sum_probs=62.8

Q ss_pred             HHHHHHHHcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc
Q 018404          144 AWAGFYEICA-PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE  222 (356)
Q Consensus       144 A~~~l~~~~~-~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~  222 (356)
                      .+.++.+..+ +-.|.+++|.| -|-+|.-.++.++.+|++|++++..+-+.          -.+. .-|.. +.     
T Consensus         9 ~~d~i~r~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~a----------lqA~-~dGf~-v~-----   70 (162)
T PF00670_consen    9 LVDGIMRATNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRA----------LQAA-MDGFE-VM-----   70 (162)
T ss_dssp             HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH----------HHHH-HTT-E-EE-----
T ss_pred             HHHHHHhcCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHH----------HHhh-hcCcE-ec-----
Confidence            3444443333 45789999999 99999999999999999999999887765          3333 33543 22     


Q ss_pred             ccHHHHHHHhCCCCccEEEeCCCchH--HHHHHHhhccCCeEEEEcc
Q 018404          223 NDLDAALKRCFPEGIDIYFEHVGGKM--LDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       223 ~~~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~  267 (356)
                       .+.+.+.     ..|++|.++|...  -.+-++.|+++-.+..+|.
T Consensus        71 -~~~~a~~-----~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh  111 (162)
T PF00670_consen   71 -TLEEALR-----DADIFVTATGNKDVITGEHFRQMKDGAILANAGH  111 (162)
T ss_dssp             --HHHHTT-----T-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred             -CHHHHHh-----hCCEEEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence             3333333     4799999999843  3577888888887777775

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK12743 oxidoreductase; Provisional

Probab=96.73  E-value=0.0093  Score=53.09  Aligned_cols=83  Identities=16%  Similarity=0.239  Sum_probs=51.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc-hhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE-KVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      +++++|+||+|++|..+++.+...|++|+.+.++.. ..      +++.+.++ ..+.. ..  +|..+...+...+.+.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGA------KETAEEVR-SHGVRAEIRQLDLSDLPEGAQALDKL   74 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHH------HHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999988865433 22      12223344 44532 22  3444321233333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        75 ~~~~~~id~li~~ag~   90 (256)
T PRK12743         75 IQRLGRIDVLVNNAGA   90 (256)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            21  368999998873

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.024  Score=51.14  Aligned_cols=104  Identities=17%  Similarity=0.169  Sum_probs=63.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~  233 (356)
                      +++++|.|+ |++|.+++..+. .|++|+.++++.++.      +++.+.++ ..+..   ..+|..+.+.+...+.+..
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dv~d~~~i~~~~~~~~   72 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENL------EAAAKTLR-EAGFDVSTQEVDVSSRESVKALAATAQ   72 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEEeecCCHHHHHHHHHHHH
Confidence            357889986 799999998875 799999999886654      22223333 33432   1234444323333333321


Q ss_pred             -CCCccEEEeCCCch----H---------------HHHHHHhhccCCeEEEEcccc
Q 018404          234 -PEGIDIYFEHVGGK----M---------------LDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       234 -~~~~d~vid~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~  269 (356)
                       .+++|++|.+.|..    .               ++.+++.+.++|+++.++...
T Consensus        73 ~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~  128 (275)
T PRK06940         73 TLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS  128 (275)
T ss_pred             hcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence             14799999999841    1               234455566678877776543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.73  E-value=0.021  Score=50.79  Aligned_cols=101  Identities=15%  Similarity=0.104  Sum_probs=62.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhh-cCCCE-EEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNK-FGFDD-AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-vv~~~~~~~~~~~~~~~~  233 (356)
                      .+.+|+|+||+|.+|..+++.+...|++|+++.++.++.          ...... .++.. ..|..+.   .+.+.+..
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~----------~~~~~~~~~~~~~~~Dl~d~---~~~l~~~~   82 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKA----------KTSLPQDPSLQIVRADVTEG---SDKLVEAI   82 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHH----------HHhcccCCceEEEEeeCCCC---HHHHHHHh
Confidence            357999999999999999988888899999999887764          332201 12221 1233321   12232222


Q ss_pred             CCCccEEEeCCCch--------------HHHHHHHhhccC--CeEEEEcccc
Q 018404          234 PEGIDIYFEHVGGK--------------MLDAVLLNMRLH--GRIAACGMIS  269 (356)
Q Consensus       234 ~~~~d~vid~~g~~--------------~~~~~~~~l~~~--G~~v~~g~~~  269 (356)
                      ..++|+||.+.|..              .....++.+...  ++++.++..+
T Consensus        83 ~~~~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~  134 (251)
T PLN00141         83 GDDSDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL  134 (251)
T ss_pred             hcCCCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence            12689999887741              123444444433  6888887653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.72  E-value=0.0076  Score=53.00  Aligned_cols=81  Identities=25%  Similarity=0.372  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|.||+|++|..++..+...|+.|+...++.++.          +.+....+.. .  ..|..+.+.+.+.+.+.
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKL----------EALAAELGERVKIFPANLSDRDEVKALGQKA   74 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH----------HHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            467999999999999999998888999998888776665          4443244331 1  22333321333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|.+|.+.|.
T Consensus        75 ~~~~~~id~vi~~ag~   90 (245)
T PRK12936         75 EADLEGVDILVNNAGI   90 (245)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            21  369999999884

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.71  E-value=0.012  Score=52.47  Aligned_cols=83  Identities=13%  Similarity=0.133  Sum_probs=52.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--CEE--EecCCcccHHHHHHHh
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--DDA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~v--v~~~~~~~~~~~~~~~  232 (356)
                      +.++||+||+|++|.+++..+...|++|+.++++.+..      ++..+.++...+.  ...  .|..+.++....+.+.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   75 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKA------ANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGV   75 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHH
Confidence            46899999999999999999988999999999886654      1122223312231  112  2333321233333332


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|+++.+.|
T Consensus        76 ~~~~~~id~vv~~ag   90 (259)
T PRK12384         76 DEIFGRVDLLVYNAG   90 (259)
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  36899999887

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.71  E-value=0.0076  Score=53.60  Aligned_cols=104  Identities=13%  Similarity=0.142  Sum_probs=66.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch-hccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK-VWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~  233 (356)
                      .+.+++|+||+|++|.++++.+...|++|+.+.++.+. .          +.++ +.+.. ..+|..+.+++.+.+.+..
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~----------~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~   74 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA----------KELR-EKGVFTIKCDVGNRDQVKKSKEVVE   74 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH----------HHHH-hCCCeEEEecCCCHHHHHHHHHHHH
Confidence            36799999999999999999998899999887655432 2          3444 33432 2234444323333343332


Q ss_pred             C--CCccEEEeCCCch--------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          234 P--EGIDIYFEHVGGK--------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       234 ~--~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      .  +++|++|.|.|..                          ..+.+++.+.  .+|+++.++....
T Consensus        75 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~  141 (255)
T PRK06463         75 KEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAG  141 (255)
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHh
Confidence            1  3689999988741                          0234444554  4689999887543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.70  E-value=0.0082  Score=52.96  Aligned_cols=84  Identities=19%  Similarity=0.243  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.+|+|+||+|++|...+..+...|++|++++++.++.      ..+.+.++ ..+.. .+  .|..+...+.+.+.+.
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDA------AATAELVE-AAGGKARARQVDVRDRAALKAAVAAG   77 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            467999999999999999988888899999999986654      11113333 33321 12  2333321333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +.+|.+|.+.|.
T Consensus        78 ~~~~~~~d~vi~~ag~   93 (251)
T PRK12826         78 VEDFGRLDILVANAGI   93 (251)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            21  268999998864

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.70  E-value=0.03  Score=49.48  Aligned_cols=108  Identities=17%  Similarity=0.197  Sum_probs=64.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~~  233 (356)
                      +.++||.||+|++|...++-+...|++|+.+.++..+.     ..+....++ +.+.. .  ..|..+..++...+.+..
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEE-----MNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATI   79 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHH-----HHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHH
Confidence            57999999999999999988888999988777543221     011112233 33322 1  234433312322233321


Q ss_pred             C--CCccEEEeCCCc-----------h---------------HHHHHHHhhccCCeEEEEccccc
Q 018404          234 P--EGIDIYFEHVGG-----------K---------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       234 ~--~~~d~vid~~g~-----------~---------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      .  +++|.+|.+.|.           +               ..+.+.+.+++.|+++.++....
T Consensus        80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         80 DRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            1  368999999983           0               12344556677899999987554

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.70  E-value=0.0092  Score=53.50  Aligned_cols=97  Identities=19%  Similarity=0.202  Sum_probs=71.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      .+|.|+| .|.+|.-++.+|-.+|++|+..+.+.+|+          +.+...|+.....-++....+.+.+.     +.
T Consensus       169 ~kv~iiG-GGvvgtnaAkiA~glgA~Vtild~n~~rl----------~~ldd~f~~rv~~~~st~~~iee~v~-----~a  232 (371)
T COG0686         169 AKVVVLG-GGVVGTNAAKIAIGLGADVTILDLNIDRL----------RQLDDLFGGRVHTLYSTPSNIEEAVK-----KA  232 (371)
T ss_pred             ccEEEEC-CccccchHHHHHhccCCeeEEEecCHHHH----------hhhhHhhCceeEEEEcCHHHHHHHhh-----hc
Confidence            3577778 69999999999999999999999999998          88875666642222333224555554     37


Q ss_pred             cEEEeCCC---ch----HHHHHHHhhccCCeEEEEccccc
Q 018404          238 DIYFEHVG---GK----MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       238 d~vid~~g---~~----~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      |++|.++=   .+    ..++.++.|+|++.+|.+....+
T Consensus       233 DlvIgaVLIpgakaPkLvt~e~vk~MkpGsVivDVAiDqG  272 (371)
T COG0686         233 DLVIGAVLIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQG  272 (371)
T ss_pred             cEEEEEEEecCCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence            88887542   21    56788999999999998875433

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.0085  Score=53.94  Aligned_cols=39  Identities=15%  Similarity=0.162  Sum_probs=34.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ++.++||+|++|++|..+++.+...|++|+.++++.++.
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~   44 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKL   44 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            367999999999999999999999999999999886654

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.009  Score=53.12  Aligned_cols=80  Identities=20%  Similarity=0.279  Sum_probs=53.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC---CC-EEEecCCcccHHHHHHHh
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG---FD-DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~-~vv~~~~~~~~~~~~~~~  232 (356)
                      +.+++|+||+|++|...+..+...|++|++++++.++.          +.+.+.+.   +. ...|..+.+.+...+.+.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAAL----------AAFADALGDARFVPVACDLTDAASLAAALANA   71 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999988888899999999887765          43332322   11 123444432333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        72 ~~~~~~~d~vi~~ag~   87 (257)
T PRK07074         72 AAERGPVDVLVANAGA   87 (257)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            11  368999999984

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.68  E-value=0.0072  Score=49.80  Aligned_cols=82  Identities=18%  Similarity=0.299  Sum_probs=50.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC--cchhccccchhHHHHHHHhhcCCC-EEE--ecCCcccHHHHHHH
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGS--REKVWLIPMQSQLVELLKNKFGFD-DAF--NYKEENDLDAALKR  231 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~-~vv--~~~~~~~~~~~~~~  231 (356)
                      ++++|+||++++|.+.++.+-..|+ +|+.+.++  .++.      +++.+.++ ..+.. .++  |..+..+....+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~------~~l~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~   73 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGA------QELIQELK-APGAKITFIECDLSDPESIRALIEE   73 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHH------HHHHHHHH-HTTSEEEEEESETTSHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccc------cccccccc-ccccccccccccccccccccccccc
Confidence            3799999999999999988888877 77777777  3333      22323344 44532 222  33332233333333


Q ss_pred             hC--CCCccEEEeCCCc
Q 018404          232 CF--PEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~--~~~~d~vid~~g~  246 (356)
                      ..  .+.+|++|.|.|.
T Consensus        74 ~~~~~~~ld~li~~ag~   90 (167)
T PF00106_consen   74 VIKRFGPLDILINNAGI   90 (167)
T ss_dssp             HHHHHSSESEEEEECSC
T ss_pred             ccccccccccccccccc
Confidence            33  2379999999884

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.68  E-value=0.014  Score=51.41  Aligned_cols=83  Identities=27%  Similarity=0.355  Sum_probs=50.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGS-AGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      +.+++|.||+|++|...+..+...|++|+.+ .++.++.      .++.+.+. ..+.. .+  .|..+...+.+.+.+.
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAA------QELLEEIK-EEGGDAIAVKADVSSEEDVENLVEQI   77 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            4689999999999999998888889999988 7776554      11112222 22221 12  2333321232323322


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        78 ~~~~~~id~vi~~ag~   93 (247)
T PRK05565         78 VEKFGKIDILVNNAGI   93 (247)
T ss_pred             HHHhCCCCEEEECCCc
Confidence            11  269999998874

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.67  E-value=0.0076  Score=54.36  Aligned_cols=109  Identities=12%  Similarity=0.088  Sum_probs=66.3

Q ss_pred             CCCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHH
Q 018404          154 PKKGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAAL  229 (356)
Q Consensus       154 ~~~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~  229 (356)
                      +-.+.++||+||+  +++|.+.++.+...|++|+.+.+++...      +++ +.+.++++..  ...|-.+.++....+
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~------~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~   79 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALK------KRV-EPLAAELGAFVAGHCDVTDEASIDAVF   79 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHH------HHH-HHHHHhcCCceEEecCCCCHHHHHHHH
Confidence            3457899999986  7999999999999999999887653211      111 3333244532  223444432333333


Q ss_pred             HHhCC--CCccEEEeCCCch---------------HH---------------HHHHHhhccCCeEEEEcccc
Q 018404          230 KRCFP--EGIDIYFEHVGGK---------------ML---------------DAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~  269 (356)
                      .+...  +.+|+++.+.|..               .+               +.+++.++.+|+++.++...
T Consensus        80 ~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~  151 (272)
T PRK08159         80 ETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG  151 (272)
T ss_pred             HHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence            33221  3789999988731               11               23345566779999887654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.66  E-value=0.01  Score=52.33  Aligned_cols=83  Identities=17%  Similarity=0.228  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|..+++.+...|++|+.++++.+..      .++.+.++ +.+.. .+  .|..+...+.+.+.+.
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~   74 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAA------EKVAADIR-AKGGNAQAFACDITDRDSVDTAVAAA   74 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHH------HHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            467899999999999999999989999999999887664      22222333 33321 12  2333321233333332


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        75 ~~~~~~~d~vi~~ag   89 (250)
T TIGR03206        75 EQALGPVDVLVNNAG   89 (250)
T ss_pred             HHHcCCCCEEEECCC
Confidence            21  36899999997

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.66  E-value=0.017  Score=49.78  Aligned_cols=101  Identities=14%  Similarity=0.172  Sum_probs=65.8

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCccc
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEEND  224 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~  224 (356)
                      ....++++++||=.|  .|.|..++.+++..+  .+|++++.+++..      +.+.+.+. +.+..   .++..    +
T Consensus        66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~------~~a~~~l~-~~~~~~~v~~~~~----d  132 (205)
T PRK13944         66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELA------IYAAQNIE-RLGYWGVVEVYHG----D  132 (205)
T ss_pred             HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHH------HHHHHHHH-HcCCCCcEEEEEC----C
Confidence            446678999999998  466888888888774  5999999987765      22223333 44542   22222    2


Q ss_pred             HHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          225 LDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      ..+.+..  .+.+|.|+-+... ......++.|+++|+++..
T Consensus       133 ~~~~~~~--~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        133 GKRGLEK--HAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             cccCCcc--CCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence            1111111  2379999876665 4556788999999999753

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.66  E-value=0.012  Score=52.61  Aligned_cols=107  Identities=21%  Similarity=0.261  Sum_probs=74.7

Q ss_pred             HHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EE--
Q 018404          142 MTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DA--  216 (356)
Q Consensus       142 ~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~v--  216 (356)
                      ..++..+....++++|++||=+|  -|-|.+++-+|+..|++|++++-|+++.      +..++.++ +.|..   .+  
T Consensus        58 ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~------~~~~~r~~-~~gl~~~v~v~l  128 (283)
T COG2230          58 RAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQL------AYAEKRIA-ARGLEDNVEVRL  128 (283)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHH------HHHHHHHH-HcCCCcccEEEe
Confidence            34555566778999999999998  4678999999999999999999999987      22333344 55654   11  


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEE-----eCCCc----hHHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYF-----EHVGG----KMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vi-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                      .|+++   +.        +.||.|+     +.+|.    ..+..+.+.|+++|+++.-...
T Consensus       129 ~d~rd---~~--------e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~  178 (283)
T COG2230         129 QDYRD---FE--------EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT  178 (283)
T ss_pred             ccccc---cc--------cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence            12221   11        1366664     45554    3678899999999999866543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.64  E-value=0.0091  Score=53.39  Aligned_cols=83  Identities=11%  Similarity=0.159  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASG--AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g--~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~~  231 (356)
                      .|.+++|+||++  |+|.++++.+...|++|+.+.++....      +.+ +.+.++.|...  .+|-.+.++..+.+.+
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~------~~~-~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~   79 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLE------KRV-KPLAEEIGCNFVSELDVTNPKSISNLFDD   79 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHH------HHH-HHHHHhcCCceEEEccCCCHHHHHHHHHH
Confidence            478999999987  899999988888999999887663211      111 33332444322  2354443233333333


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +.+|+++++.|
T Consensus        80 ~~~~~g~iDilVnnag   95 (260)
T PRK06603         80 IKEKWGSFDFLLHGMA   95 (260)
T ss_pred             HHHHcCCccEEEEccc
Confidence            322  36999999877

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.63  E-value=0.016  Score=53.45  Aligned_cols=94  Identities=17%  Similarity=0.187  Sum_probs=61.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|+|+||+|-+|..++..+...|.+|++++++.++.          ..+. ..+.+.+ .|..+.    +.+.+... ++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~----------~~l~-~~~v~~v~~Dl~d~----~~l~~al~-g~   65 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA----------SFLK-EWGAELVYGDLSLP----ETLPPSFK-GV   65 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh----------hhHh-hcCCEEEECCCCCH----HHHHHHHC-CC
Confidence            699999999999999998888999999999987665          4444 4455322 133332    12333222 58


Q ss_pred             cEEEeCCCch-------------HHHHHHHhhccCC--eEEEEccc
Q 018404          238 DIYFEHVGGK-------------MLDAVLLNMRLHG--RIAACGMI  268 (356)
Q Consensus       238 d~vid~~g~~-------------~~~~~~~~l~~~G--~~v~~g~~  268 (356)
                      |+||.+++..             .....++.++..|  +++.++..
T Consensus        66 d~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         66 TAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CEEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence            9999987631             1123444454444  88887764

>PRK07577 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.0095  Score=52.06  Aligned_cols=76  Identities=20%  Similarity=0.137  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .+.+++|.||+|++|...++.+...|++|+.+.++.+..          . .    ......|..+...+.+.+.+....
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~-~----~~~~~~D~~~~~~~~~~~~~~~~~   66 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------F-P----GELFACDLADIEQTAATLAQINEI   66 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------c-C----ceEEEeeCCCHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999875542          1 0    111223444432333344443333


Q ss_pred             -CccEEEeCCCc
Q 018404          236 -GIDIYFEHVGG  246 (356)
Q Consensus       236 -~~d~vid~~g~  246 (356)
                       ++|++|.+.|.
T Consensus        67 ~~~d~vi~~ag~   78 (234)
T PRK07577         67 HPVDAIVNNVGI   78 (234)
T ss_pred             CCCcEEEECCCC
Confidence             68999998874

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.62  E-value=0.01  Score=52.43  Aligned_cols=84  Identities=15%  Similarity=0.230  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS-AGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+||+|++|..++..+...|++|+.+ .++.++.      +++.+.++ ..+.. ..  .|..+.+++...+.+
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~   75 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAA------EETAEEIE-ALGRKALAVKANVGDVEKIKEMFAQ   75 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            46799999999999999999999999998764 4554443      12223333 33432 11  233333233333333


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|++|.+.|.
T Consensus        76 ~~~~~~~id~vi~~ag~   92 (250)
T PRK08063         76 IDEEFGRLDVFVNNAAS   92 (250)
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            321  368999998873

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.61  E-value=0.0088  Score=53.35  Aligned_cols=81  Identities=20%  Similarity=0.237  Sum_probs=51.6

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCc--chhccccchhHHHHHHHhhcCC--C-EEEecCCcccHHHH
Q 018404          156 KGEYIYVSAA--SGAVGQLVGQFAKLMGCYVVGSAGSR--EKVWLIPMQSQLVELLKNKFGF--D-DAFNYKEENDLDAA  228 (356)
Q Consensus       156 ~g~~VlI~ga--~g~vG~~ai~la~~~g~~Vi~~~~~~--~~~~~~~~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~~~  228 (356)
                      .+.+++|+||  ++++|.++++.+...|++|+.++++.  +..          +.+.++++.  . ..+|..+..++.+.
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~i~~~   75 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLT----------ERIAKRLPEPAPVLELDVTNEEHLASL   75 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHH----------HHHHHhcCCCCcEEeCCCCCHHHHHHH
Confidence            4679999998  89999999998888999999988664  222          333323432  1 22344443233333


Q ss_pred             HHHhC--CCCccEEEeCCCc
Q 018404          229 LKRCF--PEGIDIYFEHVGG  246 (356)
Q Consensus       229 ~~~~~--~~~~d~vid~~g~  246 (356)
                      +.+..  .+++|+++.+.|.
T Consensus        76 ~~~~~~~~g~iD~li~nAG~   95 (256)
T PRK07889         76 ADRVREHVDGLDGVVHSIGF   95 (256)
T ss_pred             HHHHHHHcCCCcEEEEcccc
Confidence            33222  1479999998874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.61  E-value=0.015  Score=51.34  Aligned_cols=36  Identities=22%  Similarity=0.305  Sum_probs=32.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      ++.++||+||+|++|...+..+...|++|++++++.
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~   42 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF   42 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence            467999999999999999999888999999998774

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.60  E-value=0.011  Score=52.58  Aligned_cols=82  Identities=21%  Similarity=0.274  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .|.+++|+|++|++|.++++.+...|++|+.+.++....        ..+.++ +.+.. .  .+|-.+.+++.+.+.+.
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~--------~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   79 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTE--------TIEQVT-ALGRRFLSLTADLRKIDGIPALLERA   79 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHH--------HHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            367999999999999999999999999999876543221        113343 33432 1  12333321333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        80 ~~~~~~~D~li~~Ag~   95 (253)
T PRK08993         80 VAEFGHIDILVNNAGL   95 (253)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            21  378999999883

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.015  Score=52.36  Aligned_cols=83  Identities=18%  Similarity=0.205  Sum_probs=52.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~~~  233 (356)
                      +.+++|+||+|++|..+++.+...|++|++++++.+..      .++.+.++ ..+... .  .|..+.+.+...+.+..
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKC------EELVDKIR-ADGGEAVAFPLDVTDPDSVKSFVAQAE   82 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            45899999999999999998888999999998876654      11122233 334321 1  23333323333333321


Q ss_pred             --CCCccEEEeCCCc
Q 018404          234 --PEGIDIYFEHVGG  246 (356)
Q Consensus       234 --~~~~d~vid~~g~  246 (356)
                        -+++|++|.+.|.
T Consensus        83 ~~~~~id~vi~~Ag~   97 (274)
T PRK07775         83 EALGEIEVLVSGAGD   97 (274)
T ss_pred             HhcCCCCEEEECCCc
Confidence              1368999998874

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.58  E-value=0.016  Score=51.73  Aligned_cols=85  Identities=18%  Similarity=0.192  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|..+++.+...|++|+.+.++....     ..++.+.++ ..+..   ..+|..+.....+.+.+.
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~-----~~~~~~~l~-~~~~~~~~~~~Dl~~~~~i~~~~~~~   79 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEE-----ANDVAEEIK-KAGGEAIAVKGDVTVESDVVNLIQTA   79 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHH-----HHHHHHHHH-HcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999998887754321     111223333 33432   123444432333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|+++.+.|.
T Consensus        80 ~~~~g~id~lv~~ag~   95 (261)
T PRK08936         80 VKEFGTLDVMINNAGI   95 (261)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            11  368999998884

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.57  E-value=0.039  Score=42.77  Aligned_cols=102  Identities=21%  Similarity=0.260  Sum_probs=65.2

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDA  227 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~  227 (356)
                      ...+.++++|+-.| +|. |..+..+++.. +.+|++++.++...      +.+.+.++ .++..  .++..    +...
T Consensus        14 ~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~------~~a~~~~~-~~~~~~~~~~~~----~~~~   80 (124)
T TIGR02469        14 KLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEAL------RLIERNAR-RFGVSNIVIVEG----DAPE   80 (124)
T ss_pred             HcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHH------HHHHHHHH-HhCCCceEEEec----cccc
Confidence            34567788999998 544 99999999987 46999999988776      11222233 34443  22221    1111


Q ss_pred             HHHHhCCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          228 ALKRCFPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .+.. ..+.+|+|+...+.    ..++.+.+.|+++|+++...
T Consensus        81 ~~~~-~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        81 ALED-SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             cChh-hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            1111 12369999976543    36788999999999988653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.56  E-value=0.012  Score=52.15  Aligned_cols=82  Identities=15%  Similarity=0.171  Sum_probs=52.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhC-
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCF-  233 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~-  233 (356)
                      .++||+||+|++|..++..+...|++|++++++.++.      +++.+.+. ..+..   ...|..+.+++.+.+.+.. 
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGA------EAAAKVAT-DAGGSVIYLVADVTKEDEIADMIAAAAA   74 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            5799999999999999998888999999999987665      11222222 22321   1224444323333333332 


Q ss_pred             -CCCccEEEeCCCc
Q 018404          234 -PEGIDIYFEHVGG  246 (356)
Q Consensus       234 -~~~~d~vid~~g~  246 (356)
                       .+++|.+|.+.|.
T Consensus        75 ~~~~~d~vi~~a~~   88 (255)
T TIGR01963        75 EFGGLDILVNNAGI   88 (255)
T ss_pred             hcCCCCEEEECCCC
Confidence             1368999988863

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.55  E-value=0.045  Score=43.11  Aligned_cols=96  Identities=21%  Similarity=0.242  Sum_probs=61.9

Q ss_pred             EEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc--ccHHHH-------
Q 018404          160 IYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE--NDLDAA-------  228 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~-------  228 (356)
                      |.|+|++|++|..+.++.+...  .+|++.+-..+-       +.|.+.++ +|.+..++-.++.  ..+.+.       
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~-------~~L~~q~~-~f~p~~v~i~~~~~~~~l~~~~~~~~~~   72 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNI-------EKLAEQAR-EFKPKYVVIADEEAYEELKKALPSKGPG   72 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTH-------HHHHHHHH-HHT-SEEEESSHHHHHHHHHHHHHTTSS
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCH-------HHHHHHHH-HhCCCEEEEcCHHHHHHHHHHhhhcCCC
Confidence            6799999999999999999996  688887754332       23446677 8888776655442  011111       


Q ss_pred             ---------HHHhCC-CCccEEEeCCCc-hHHHHHHHhhccCCeEE
Q 018404          229 ---------LKRCFP-EGIDIYFEHVGG-KMLDAVLLNMRLHGRIA  263 (356)
Q Consensus       229 ---------~~~~~~-~~~d~vid~~g~-~~~~~~~~~l~~~G~~v  263 (356)
                               +.+... ..+|+|+.++-+ ..+...+..++.+-++.
T Consensus        73 ~~v~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia  118 (129)
T PF02670_consen   73 IEVLSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA  118 (129)
T ss_dssp             SEEEESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred             CEEEeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence                     222222 268888887766 78888888888665544

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.016  Score=52.18  Aligned_cols=90  Identities=21%  Similarity=0.257  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhc-cccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW-LIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+||+|++|..+++.+...|++|++++++.+... +...-.++.+.++ ..+..   ...|..+...+...+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE-AAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHH
Confidence            4679999999999999999988889999999998754310 0000112223333 33432   12344443233333332


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +.+|++|.+.|.
T Consensus        84 ~~~~~g~id~li~~ag~  100 (273)
T PRK08278         84 AVERFGGIDICVNNASA  100 (273)
T ss_pred             HHHHhCCCCEEEECCCC
Confidence            211  369999998884

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=96.55  E-value=0.0098  Score=54.85  Aligned_cols=80  Identities=11%  Similarity=0.107  Sum_probs=52.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcC---CC-E--EEecCCcccHHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFG---FD-D--AFNYKEENDLDAAL  229 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~-~--vv~~~~~~~~~~~~  229 (356)
                      +.+++|+||++++|.+++..+...| ++|+.++++.++.          +.+.++++   .. .  .+|..+..++...+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~----------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   72 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKA----------EQAAKSLGMPKDSYTIMHLDLGSLDSVRQFV   72 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHH----------HHHHHHhcCCCCeEEEEEcCCCCHHHHHHHH
Confidence            5689999999999999998888889 8999999887765          33332332   11 1  13444432333333


Q ss_pred             HHhC--CCCccEEEeCCCc
Q 018404          230 KRCF--PEGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~--~~~~d~vid~~g~  246 (356)
                      .+..  .+++|++|.+.|.
T Consensus        73 ~~~~~~~~~iD~lI~nAG~   91 (314)
T TIGR01289        73 QQFRESGRPLDALVCNAAV   91 (314)
T ss_pred             HHHHHhCCCCCEEEECCCc
Confidence            3321  2379999998873

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05599 hypothetical protein; Provisional

Probab=96.54  E-value=0.014  Score=51.76  Aligned_cols=80  Identities=16%  Similarity=0.160  Sum_probs=50.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--E--EEecCCcccHHHHHHHhC-
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--D--AFNYKEENDLDAALKRCF-  233 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~--vv~~~~~~~~~~~~~~~~-  233 (356)
                      +++|+||++|+|.+.+..+. .|++|+.++++.++.      +++.+.++ +.|..  .  .+|..+.+.+.+.+.+.. 
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~------~~~~~~l~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   73 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAA------QGLASDLR-QRGATSVHVLSFDAQDLDTHRELVKQTQE   73 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHH------HHHHHHHH-hccCCceEEEEcccCCHHHHHHHHHHHHH
Confidence            68999999999998887666 499999999887775      23334444 33432  1  234444323333332221 


Q ss_pred             -CCCccEEEeCCCc
Q 018404          234 -PEGIDIYFEHVGG  246 (356)
Q Consensus       234 -~~~~d~vid~~g~  246 (356)
                       .+++|+++.+.|.
T Consensus        74 ~~g~id~lv~nag~   87 (246)
T PRK05599         74 LAGEISLAVVAFGI   87 (246)
T ss_pred             hcCCCCEEEEecCc
Confidence             1478999998874

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.011  Score=52.77  Aligned_cols=82  Identities=21%  Similarity=0.244  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|..+++.+...|++|+.++++.+..       +..+.+. ..+..   ...|..+.+++.+.+.+.
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~-------~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~   76 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIE-------KLADELC-GRGHRCTAVVADVRDPASVAAAIKRA   76 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHH-------HHHHHHH-HhCCceEEEECCCCCHHHHHHHHHHH
Confidence            467999999999999999999988999999998875432       1112233 22322   123443332333333332


Q ss_pred             C--CCCccEEEeCCC
Q 018404          233 F--PEGIDIYFEHVG  245 (356)
Q Consensus       233 ~--~~~~d~vid~~g  245 (356)
                      .  .+.+|++|.+.|
T Consensus        77 ~~~~~~id~vi~~ag   91 (263)
T PRK08226         77 KEKEGRIDILVNNAG   91 (263)
T ss_pred             HHHcCCCCEEEECCC
Confidence            1  136899999888

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=96.54  E-value=0.035  Score=48.88  Aligned_cols=108  Identities=17%  Similarity=0.145  Sum_probs=71.3

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL  225 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  225 (356)
                      |..+.+..+.++||-.|  .+.|..++.+++.+  +.+|+.++.+++..      +.+.+.++ +.|....+..... +.
T Consensus        60 L~~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~------~~A~~n~~-~~gl~~~i~~~~g-da  129 (234)
T PLN02781         60 LSMLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAY------EVGLEFIK-KAGVDHKINFIQS-DA  129 (234)
T ss_pred             HHHHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCcEEEEEc-cH
Confidence            44456677788999998  57788778888876  35999999998776      23334444 5566432333232 44


Q ss_pred             HHHHHHhC----CCCccEEEeCCCc----hHHHHHHHhhccCCeEEEE
Q 018404          226 DAALKRCF----PEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       226 ~~~~~~~~----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  265 (356)
                      .+.+.++.    .+.||+||--...    ..+..+++.|++||.++.-
T Consensus       130 ~~~L~~l~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d  177 (234)
T PLN02781        130 LSALDQLLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD  177 (234)
T ss_pred             HHHHHHHHhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence            44454432    2379999865432    4677889999999988754

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.0092  Score=52.95  Aligned_cols=78  Identities=14%  Similarity=0.237  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhC-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCF-  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~-  233 (356)
                      .+.+++|+||+|++|.+.++.+...|++|+.++++.++.          .  . ..... ...|..+.+++.+.+.+.. 
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~----------~--~-~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET----------V--D-GRPAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh----------h--c-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            478999999999999999999989999999998875431          1  1 11111 1234443323333333321 


Q ss_pred             -CCCccEEEeCCCc
Q 018404          234 -PEGIDIYFEHVGG  246 (356)
Q Consensus       234 -~~~~d~vid~~g~  246 (356)
                       .+.+|++|.+.|.
T Consensus        72 ~~~~id~vi~~ag~   85 (252)
T PRK07856         72 RHGRLDVLVNNAGG   85 (252)
T ss_pred             HcCCCCEEEECCCC
Confidence             1368999998873

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.53  E-value=0.013  Score=51.86  Aligned_cols=41  Identities=22%  Similarity=0.211  Sum_probs=36.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ..++.+++|.||+|++|...++.+...|++|++++++.+..
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~   49 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKL   49 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHH
Confidence            45788999999999999999988888899999999887654

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=96.52  E-value=0.039  Score=48.88  Aligned_cols=108  Identities=11%  Similarity=0.082  Sum_probs=74.0

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL  225 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  225 (356)
                      |..+.+..+-.+||-+|  ..+|+.++.+|+.+  +.+|+.+..+++..      +.+.+.++ +.|...-++.... +.
T Consensus        71 L~~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~------~~Ar~~~~-~ag~~~~I~~~~G-~a  140 (247)
T PLN02589         71 LNMLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENY------ELGLPVIQ-KAGVAHKIDFREG-PA  140 (247)
T ss_pred             HHHHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHH------HHHHHHHH-HCCCCCceEEEec-cH
Confidence            44445566677999998  68899999999987  56999999987765      22334445 6676444444443 45


Q ss_pred             HHHHHHhC-----CCCccEEEeCCCc----hHHHHHHHhhccCCeEEEE
Q 018404          226 DAALKRCF-----PEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       226 ~~~~~~~~-----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  265 (356)
                      .+.+.++.     .+.||.||--...    ..+..++++|++||.++.=
T Consensus       141 ~e~L~~l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~D  189 (247)
T PLN02589        141 LPVLDQMIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYD  189 (247)
T ss_pred             HHHHHHHHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEEc
Confidence            55555542     1479999865443    3667889999999997743

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=96.51  E-value=0.0072  Score=51.97  Aligned_cols=110  Identities=16%  Similarity=0.123  Sum_probs=72.2

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL  225 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  225 (356)
                      |..+.+..+..+||-+|  +++|+.++.+|+.+  +.+|+.+..+++..      +.+.+.++ +.|....++.... +.
T Consensus        37 L~~l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~------~~A~~~~~-~ag~~~~I~~~~g-da  106 (205)
T PF01596_consen   37 LQMLVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERA------EIARENFR-KAGLDDRIEVIEG-DA  106 (205)
T ss_dssp             HHHHHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHH------HHHHHHHH-HTTGGGGEEEEES--H
T ss_pred             HHHHHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHH------HHHHHHHH-hcCCCCcEEEEEe-cc
Confidence            33344455667999998  78899999999987  57999999998876      33334445 6676432333222 44


Q ss_pred             HHHHHHhC----CCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          226 DAALKRCF----PEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       226 ~~~~~~~~----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+.+.++.    .+.||.||--..-    ..+..++++|+++|.++.=..
T Consensus       107 ~~~l~~l~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN~  156 (205)
T PF01596_consen  107 LEVLPELANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADNV  156 (205)
T ss_dssp             HHHHHHHHHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEETT
T ss_pred             HhhHHHHHhccCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEccc
Confidence            44444432    1379999754443    356788999999999886543

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.50  E-value=0.012  Score=52.66  Aligned_cols=83  Identities=17%  Similarity=0.247  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASG--AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g--~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~  231 (356)
                      +|.+++|+||++  |+|.++++.+...|++|+.+.+++ +.     .+.+ +.+..+.+..  ..+|-.+.+++...+.+
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~-----~~~~-~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL-----KGRV-EEFAAQLGSDIVLPCDVAEDASIDAMFAE   77 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hH-----HHHH-HHHHhccCCceEeecCCCCHHHHHHHHHH
Confidence            478999999885  899999998888999999887763 21     0011 3333133321  22344443234433433


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +.+|++|++.|
T Consensus        78 ~~~~~g~iD~linnAg   93 (262)
T PRK07984         78 LGKVWPKFDGFVHSIG   93 (262)
T ss_pred             HHhhcCCCCEEEECCc
Confidence            322  36999999987

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.015  Score=52.27  Aligned_cols=81  Identities=19%  Similarity=0.253  Sum_probs=51.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHhCC-
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRCFP-  234 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~~~-  234 (356)
                      +|+|+||+|++|...++.+...|++|+.++++.++.      +++...++ ..+.. ..  .|..+..++.+.+.+... 
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   74 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGG------EETLKLLR-EAGGDGFYQRCDVRDYSQLTALAQACEEK   74 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            699999999999999988888999999999887765      11112233 23332 11  233332123333332211 


Q ss_pred             -CCccEEEeCCCc
Q 018404          235 -EGIDIYFEHVGG  246 (356)
Q Consensus       235 -~~~d~vid~~g~  246 (356)
                       +++|++|.+.|.
T Consensus        75 ~~~id~lI~~ag~   87 (270)
T PRK05650         75 WGGIDVIVNNAGV   87 (270)
T ss_pred             cCCCCEEEECCCC
Confidence             369999999884

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.039  Score=48.84  Aligned_cols=38  Identities=18%  Similarity=0.244  Sum_probs=31.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCcchh
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGS-AGSREKV  194 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~-~~~~~~~  194 (356)
                      +.+++|+||+|++|..+++.+...|++|++. .++.++.
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~   44 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAA   44 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence            5799999999999999999888889998775 4555443

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.47  E-value=0.012  Score=52.63  Aligned_cols=84  Identities=7%  Similarity=0.138  Sum_probs=50.8

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAA--SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga--~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+||  ++++|.+.++.+...|++|+.+.+.+...      +.+ +.+..+.+..  ...|-.+.++..+.+.+
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   77 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLE------ERV-RKMAAELDSELVFRCDVASDDEINQVFAD   77 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHH------HHH-HHHHhccCCceEEECCCCCHHHHHHHHHH
Confidence            5779999996  67999999999989999999876542211      111 2232133432  22344443233333333


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|+++++.|.
T Consensus        78 ~~~~~g~iD~lVnnAG~   94 (261)
T PRK08690         78 LGKHWDGLDGLVHSIGF   94 (261)
T ss_pred             HHHHhCCCcEEEECCcc
Confidence            221  379999998874

>PRK05855 short chain dehydrogenase; Validated

Probab=96.45  E-value=0.013  Score=58.59  Aligned_cols=84  Identities=18%  Similarity=0.187  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++-+...|++|+.++++.++.      +++.+.++ ..|..   ..+|..+.....+.+.+.
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~  386 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAA------ERTAELIR-AAGAVAHAYRVDVSDADAMEAFAEWV  386 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            457899999999999999998888999999999987665      22223333 33432   123444432333333332


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+.+|++|++.|.
T Consensus       387 ~~~~g~id~lv~~Ag~  402 (582)
T PRK05855        387 RAEHGVPDIVVNNAGI  402 (582)
T ss_pred             HHhcCCCcEEEECCcc
Confidence            2  1368999999884

>PRK07023 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.04  Score=48.47  Aligned_cols=35  Identities=26%  Similarity=0.252  Sum_probs=31.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      +++|+||+|++|..+++.+...|++|++++++.++
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~   37 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP   37 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch
Confidence            69999999999999999988899999999887654

>TIGR02415 23BDH acetoin reductases

Probab=96.42  E-value=0.017  Score=51.07  Aligned_cols=81  Identities=12%  Similarity=0.191  Sum_probs=51.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHhCC-
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRCFP-  234 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~~~-  234 (356)
                      +++|.|++|++|...++.+...|++|+.+.++.++.      .++.+.++ ..+.. .  ..|..+...+.+.+.+... 
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   74 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETA------KETAKEIN-QAGGKAVAYKLDVSDKDQVFSAIDQAAEK   74 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            799999999999999999989999999999876554      11112233 33432 1  2243333233333333221 


Q ss_pred             -CCccEEEeCCCc
Q 018404          235 -EGIDIYFEHVGG  246 (356)
Q Consensus       235 -~~~d~vid~~g~  246 (356)
                       +.+|++|.+.|.
T Consensus        75 ~~~id~vi~~ag~   87 (254)
T TIGR02415        75 FGGFDVMVNNAGV   87 (254)
T ss_pred             cCCCCEEEECCCc
Confidence             268999998874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.011  Score=52.74  Aligned_cols=38  Identities=24%  Similarity=0.240  Sum_probs=33.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      +|.++||+||+|++|...++.+...|++|++++++.+.
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~   45 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD   45 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh
Confidence            47899999999999999999988899999999987543

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.39  E-value=0.044  Score=46.46  Aligned_cols=100  Identities=15%  Similarity=0.127  Sum_probs=62.8

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR  231 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  231 (356)
                      .+.++.+||-.|  .|.|..++.+++.. +++|++++.+++..      +.+.+.++ +.+.+. +..... +..+ +..
T Consensus        42 ~l~~g~~VLDiG--cGtG~~al~la~~~~~~~V~giD~s~~~l------~~A~~~~~-~~~l~~-i~~~~~-d~~~-~~~  109 (187)
T PRK00107         42 YLPGGERVLDVG--SGAGFPGIPLAIARPELKVTLVDSLGKKI------AFLREVAA-ELGLKN-VTVVHG-RAEE-FGQ  109 (187)
T ss_pred             hcCCCCeEEEEc--CCCCHHHHHHHHHCCCCeEEEEeCcHHHH------HHHHHHHH-HcCCCC-EEEEec-cHhh-CCC
Confidence            355688999988  34566667777655 67999999988765      22223333 455543 222221 2222 211


Q ss_pred             hCCCCccEEEeCCCc---hHHHHHHHhhccCCeEEEEc
Q 018404          232 CFPEGIDIYFEHVGG---KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       232 ~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g  266 (356)
                        .+.+|+|+-....   ..+..+.+.|+++|+++.+-
T Consensus       110 --~~~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        110 --EEKFDVVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             --CCCccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence              2379999964332   46678899999999998773

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.025  Score=49.80  Aligned_cols=76  Identities=14%  Similarity=0.176  Sum_probs=50.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC--CC-EEEecCCcccHHHHHHHhCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG--FD-DAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~-~vv~~~~~~~~~~~~~~~~~  234 (356)
                      .+++|+||+|++|...+..+...|++|+++++++++.          +.+. +.+  .. ...|..+.+++.+.+.+.. 
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~----------~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~-   69 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVL----------DELH-TQSANIFTLAFDVTDHPGTKAALSQLP-   69 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHH----------HHHH-HhcCCCeEEEeeCCCHHHHHHHHHhcc-
Confidence            4799999999999998888888899999999987776          5554 322  21 2345544424444444432 


Q ss_pred             CCccEEEeCCC
Q 018404          235 EGIDIYFEHVG  245 (356)
Q Consensus       235 ~~~d~vid~~g  245 (356)
                      ...|.++.+.|
T Consensus        70 ~~~d~~i~~ag   80 (240)
T PRK06101         70 FIPELWIFNAG   80 (240)
T ss_pred             cCCCEEEEcCc
Confidence            24577666665

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=96.38  E-value=0.051  Score=47.82  Aligned_cols=171  Identities=18%  Similarity=0.168  Sum_probs=94.3

Q ss_pred             cCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE--ecCCccc---HHHHHHHhCCCC
Q 018404          164 AAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF--NYKEEND---LDAALKRCFPEG  236 (356)
Q Consensus       164 ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv--~~~~~~~---~~~~~~~~~~~~  236 (356)
                      |++  +++|.+.++-+...|++|+++.++.++.     .+.+ +.+.++.+.. ++  |..++.+   +.+.+.+..++.
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~-----~~~~-~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~   73 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKL-----ADAL-EELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGR   73 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHH-----HHHH-HHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSS
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHH-----HHHH-HHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCC
Confidence            455  9999999999999999999999998873     1222 3444366654 33  3333212   333344444367


Q ss_pred             ccEEEeCCCc-h-----------------------------HHHHHHHhhccCCeEEEEccccccCCCCCccccc-----
Q 018404          237 IDIYFEHVGG-K-----------------------------MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHN-----  281 (356)
Q Consensus       237 ~d~vid~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-----  281 (356)
                      +|+++.+.|. .                             ..+.+.+.++++|.++.++...............     
T Consensus        74 iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaa  153 (241)
T PF13561_consen   74 IDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAA  153 (241)
T ss_dssp             ESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHH
T ss_pred             eEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHH
Confidence            9999987653 1                             1255566788899999887754322111111000     


Q ss_pred             --------hHHHHh-hcceeeceeeecchhhHHHH---HHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCC
Q 018404          282 --------LMNVVY-KRIRMEGFVVFDYFPQYSRF---LDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGR  344 (356)
Q Consensus       282 --------~~~~~~-~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~  344 (356)
                              ...+-. +++++......-......+.   .+++.+.+.+.   .+..+....+|+.++...+.+..
T Consensus       154 l~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~---~pl~r~~~~~evA~~v~fL~s~~  225 (241)
T PF13561_consen  154 LEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKR---IPLGRLGTPEEVANAVLFLASDA  225 (241)
T ss_dssp             HHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHH---STTSSHBEHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhh---hccCCCcCHHHHHHHHHHHhCcc
Confidence                    112223 46666555433221111111   23333333321   12222236778999999887654

...

>PRK09135 pteridine reductase; Provisional

Probab=96.37  E-value=0.024  Score=49.93  Aligned_cols=37  Identities=8%  Similarity=0.117  Sum_probs=32.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      .+.++||+||+|++|..+++.+...|++|++++++..
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~   41 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSA   41 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH
Confidence            4578999999999999999888889999999997643

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.37  E-value=0.022  Score=54.45  Aligned_cols=74  Identities=16%  Similarity=0.213  Sum_probs=53.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      -.+.+|+|.| +|++|.+++..+...|+ +++++.|+.++.          +.+.++++...++.+.   ++.+.+.   
T Consensus       179 l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra----------~~La~~~~~~~~~~~~---~l~~~l~---  241 (414)
T PRK13940        179 ISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKA----------QKITSAFRNASAHYLS---ELPQLIK---  241 (414)
T ss_pred             ccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHH----------HHHHHHhcCCeEecHH---HHHHHhc---
Confidence            4578999999 79999999999999997 789888988876          5555466522233221   2222222   


Q ss_pred             CCCccEEEeCCCch
Q 018404          234 PEGIDIYFEHVGGK  247 (356)
Q Consensus       234 ~~~~d~vid~~g~~  247 (356)
                        .+|+||.|++.+
T Consensus       242 --~aDiVI~aT~a~  253 (414)
T PRK13940        242 --KADIIIAAVNVL  253 (414)
T ss_pred             --cCCEEEECcCCC
Confidence              489999999984

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.36  E-value=0.047  Score=47.39  Aligned_cols=103  Identities=18%  Similarity=0.210  Sum_probs=64.9

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  227 (356)
                      ....++++++||=.|  .|.|..++.+++..+.  +|++++.+++..      +.+.+.++ +.|.+.+- .... +..+
T Consensus        71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~------~~A~~~~~-~~g~~~v~-~~~~-d~~~  139 (215)
T TIGR00080        71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELA------EKAERRLR-KLGLDNVI-VIVG-DGTQ  139 (215)
T ss_pred             HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHH------HHHHHHHH-HCCCCCeE-EEEC-Cccc
Confidence            446788999999998  5667888888888754  799999887765      22223344 45553211 1111 2111


Q ss_pred             HHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          228 ALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      .+.  ..+.||+|+-.... .......+.|+++|+++..
T Consensus       140 ~~~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       140 GWE--PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             CCc--ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            111  11379988865444 4556788999999998754

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.027  Score=50.14  Aligned_cols=84  Identities=13%  Similarity=0.134  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-chhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-EKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~  231 (356)
                      .+.+++|+||+|++|..+++.+...|++|+.+.+.. ++.      +++.+.++ ..+..   ...|..+...+.+.+.+
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~   80 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEA------EALAAEIR-ALGRRAVALQADLADEAEVRALVAR   80 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            356899999999999999998888999998877643 332      11222232 22332   12344433233333333


Q ss_pred             hC--CCCccEEEeCCCc
Q 018404          232 CF--PEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~--~~~~d~vid~~g~  246 (356)
                      ..  .+++|++|.+.|.
T Consensus        81 ~~~~~~~iD~vi~~ag~   97 (258)
T PRK09134         81 ASAALGPITLLVNNASL   97 (258)
T ss_pred             HHHHcCCCCEEEECCcC
Confidence            21  1369999999873

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.021  Score=50.79  Aligned_cols=88  Identities=15%  Similarity=0.163  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.++++.+...|++|+.+.++..+.  .+..+++.+.++ ..+..   ..+|..+..+....+.+.
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~--~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAAS--KADAEETVAAVK-AAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccc--hHHHHHHHHHHH-HhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            367899999999999999999988999977776543211  011122223333 33432   123444332333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        84 ~~~~~~id~li~~ag~   99 (257)
T PRK12744         84 KAAFGRPDIAINTVGK   99 (257)
T ss_pred             HHhhCCCCEEEECCcc
Confidence            21  378999998883

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.35  E-value=0.023  Score=54.13  Aligned_cols=39  Identities=31%  Similarity=0.427  Sum_probs=34.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ++.+++|+||+|++|.+.++.+...|++|+++++++++.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l  215 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKI  215 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            467999999999999999998888999999999876654

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.32  E-value=0.15  Score=43.39  Aligned_cols=103  Identities=17%  Similarity=0.183  Sum_probs=62.2

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLD  226 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~  226 (356)
                      ....+.++++||=.|  .|.|..++.+++.. +.+|++++.+++..      +.+++.++ +++...  ++..    +..
T Consensus        34 ~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~------~~a~~n~~-~~~~~~v~~~~~----d~~  100 (196)
T PRK07402         34 SQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVV------NLIRRNCD-RFGVKNVEVIEG----SAP  100 (196)
T ss_pred             HhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHH------HHHHHHHH-HhCCCCeEEEEC----chH
Confidence            445678889887776  45566667777665 57999999998776      22223333 455532  2221    332


Q ss_pred             HHHHHhCCCCccE-EEeCCCc--hHHHHHHHhhccCCeEEEEc
Q 018404          227 AALKRCFPEGIDI-YFEHVGG--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       227 ~~~~~~~~~~~d~-vid~~g~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +.+..... .+|. +++....  ..+..+.+.|+++|+++...
T Consensus       101 ~~~~~~~~-~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        101 ECLAQLAP-APDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             HHHhhCCC-CCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            22332222 2344 4443322  56788999999999988774

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.29  E-value=0.08  Score=44.83  Aligned_cols=98  Identities=12%  Similarity=0.087  Sum_probs=61.0

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDA  227 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~  227 (356)
                      ...+++|++||..| +|.-+ .+..+++..  ..+|++++.++...               ..++..+ .|..+. ...+
T Consensus        27 ~~~i~~g~~VLDiG-~GtG~-~~~~l~~~~~~~~~v~~vDis~~~~---------------~~~i~~~~~d~~~~-~~~~   88 (188)
T TIGR00438        27 FKLIKPGDTVLDLG-AAPGG-WSQVAVEQVGGKGRVIAVDLQPMKP---------------IENVDFIRGDFTDE-EVLN   88 (188)
T ss_pred             hcccCCCCEEEEec-CCCCH-HHHHHHHHhCCCceEEEEecccccc---------------CCCceEEEeeCCCh-hHHH
Confidence            35678999999999 44444 444555544  34899999886431               1233211 233332 3344


Q ss_pred             HHHHhCCC-CccEEEeC-----CC-------------chHHHHHHHhhccCCeEEEEc
Q 018404          228 ALKRCFPE-GIDIYFEH-----VG-------------GKMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       228 ~~~~~~~~-~~d~vid~-----~g-------------~~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .+.+..++ ++|+|+..     .|             ...+..+.++|+++|+++...
T Consensus        89 ~l~~~~~~~~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438        89 KIRERVGDDKVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             HHHHHhCCCCccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            55555555 89999952     22             135677899999999998754

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.28  E-value=0.048  Score=45.29  Aligned_cols=95  Identities=14%  Similarity=0.054  Sum_probs=59.6

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      .|+....+...+.....--.|.+|+|.|++..+|..++..++.+|++|+++.++.+.+          .           
T Consensus        24 ~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l----------~-----------   82 (168)
T cd01080          24 IPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNL----------K-----------   82 (168)
T ss_pred             cCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhH----------H-----------
Confidence            4554444555454443335789999999533469999999999999988888664332          1           


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                                +.+.     .+|+||.+++...+ --...++++-.++.++.+
T Consensus        83 ----------~~l~-----~aDiVIsat~~~~i-i~~~~~~~~~viIDla~p  118 (168)
T cd01080          83 ----------EHTK-----QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGIN  118 (168)
T ss_pred             ----------HHHh-----hCCEEEEcCCCCce-ecHHHccCCeEEEEccCC
Confidence                      1122     26788888887332 222345666666677753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=96.28  E-value=0.061  Score=50.43  Aligned_cols=98  Identities=18%  Similarity=0.165  Sum_probs=66.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH------
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL------  229 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~------  229 (356)
                      .+|.|+|++|++|..++...+..  .++|++.+-..+.       +.+.+.++ +|+...++-.++  .....+      
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~-------~~l~~q~~-~f~p~~v~i~~~--~~~~~l~~~l~~   71 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNV-------ELLAEQAR-EFRPKYVVVADE--EAAKELKEALAA   71 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCH-------HHHHHHHH-HhCCCEEEEcCH--HHHHHHHHhhcc
Confidence            47999999999999999998876  5688888733222       12335555 888876654433  112222      


Q ss_pred             ------------HHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          230 ------------KRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       230 ------------~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                                  .+.... .+|+|+.+++| ..+...+..++.|-++.+.
T Consensus        72 ~~~~v~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA  121 (385)
T PRK05447         72 AGIEVLAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA  121 (385)
T ss_pred             CCceEEEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence                        222222 68999999988 6788888889888776653

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.28  E-value=0.028  Score=49.86  Aligned_cols=83  Identities=12%  Similarity=0.132  Sum_probs=51.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHhCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~~~  234 (356)
                      .+++|+||+|++|..++..+...|++|+.++++....     .++..+.++ ..+.. .  ..|..+..++.+.+.+...
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~-----~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEE-----LAATQQELR-ALGVEVIFFPADVADLSAHEAMLDAAQA   76 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhH-----HHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            5799999999999999999988999999998764321     011123333 33321 1  2344443233333333322


Q ss_pred             --CCccEEEeCCCc
Q 018404          235 --EGIDIYFEHVGG  246 (356)
Q Consensus       235 --~~~d~vid~~g~  246 (356)
                        +++|++|.+.|.
T Consensus        77 ~~~~id~vi~~ag~   90 (256)
T PRK12745         77 AWGRIDCLVNNAGV   90 (256)
T ss_pred             hcCCCCEEEECCcc
Confidence              368999998874

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.27  E-value=0.016  Score=50.90  Aligned_cols=82  Identities=20%  Similarity=0.247  Sum_probs=49.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~  233 (356)
                      .++||+||+|++|..+++.+...|++|+++.+ +.++.      ++..+... ..+..   ...|..+...+.+.+.+..
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERA------EAWLQEQG-ALGFDFRVVEGDVSSFESCKAAVAKVE   73 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHH-hhCCceEEEEecCCCHHHHHHHHHHHH
Confidence            37899999999999999999999999999887 33332      00111111 12211   1234443323333333322


Q ss_pred             --CCCccEEEeCCCc
Q 018404          234 --PEGIDIYFEHVGG  246 (356)
Q Consensus       234 --~~~~d~vid~~g~  246 (356)
                        .+.+|.||.+.|.
T Consensus        74 ~~~~~id~vi~~ag~   88 (242)
T TIGR01829        74 AELGPIDVLVNNAGI   88 (242)
T ss_pred             HHcCCCcEEEECCCC
Confidence              1368999999873

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.27  E-value=0.014  Score=52.14  Aligned_cols=84  Identities=14%  Similarity=0.190  Sum_probs=50.7

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAA--SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga--~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+||  ++++|.++++.+...|++|+.+.+.....      +.+ +.+.++++..  ..+|..+.++....+.+
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   77 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK------DRI-TEFAAEFGSDLVFPCDVASDEQIDALFAS   77 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH------HHH-HHHHHhcCCcceeeccCCCHHHHHHHHHH
Confidence            4789999996  57999999988888999998875431111      111 3332244432  22344443233333333


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +.+|+++++.|.
T Consensus        78 ~~~~~g~iD~lvnnAG~   94 (260)
T PRK06997         78 LGQHWDGLDGLVHSIGF   94 (260)
T ss_pred             HHHHhCCCcEEEEcccc
Confidence            322  479999998873

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.25  E-value=0.016  Score=51.74  Aligned_cols=77  Identities=14%  Similarity=0.160  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhC-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCF-  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~-  233 (356)
                      .+.+++|+||+|++|.++++.+...|++|+.++++.++.          +    ..... ...|..+..++.+.+.+.. 
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~----------~----~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG----------Q----HENYQFVPTDVSSAEEVNHTVAEIIE   73 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc----------c----cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            367999999999999999999999999999998876654          2    11111 1234444323333333321 


Q ss_pred             -CCCccEEEeCCCc
Q 018404          234 -PEGIDIYFEHVGG  246 (356)
Q Consensus       234 -~~~~d~vid~~g~  246 (356)
                       .+++|++|.+.|.
T Consensus        74 ~~g~id~li~~Ag~   87 (266)
T PRK06171         74 KFGRIDGLVNNAGI   87 (266)
T ss_pred             HcCCCCEEEECCcc
Confidence             1368999998873

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.24  E-value=0.019  Score=58.61  Aligned_cols=85  Identities=19%  Similarity=0.274  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC----EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD----DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~~~  231 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.+..      +++.+.+.+..+..    ...|..+..++.+.+.+
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~------~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~  486 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAA------EAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD  486 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHH------HHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999888999999999887665      11112222122321    12333333233333333


Q ss_pred             hC--CCCccEEEeCCCc
Q 018404          232 CF--PEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~--~~~~d~vid~~g~  246 (356)
                      ..  -+++|++|.+.|.
T Consensus       487 i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       487 VALAYGGVDIVVNNAGI  503 (676)
T ss_pred             HHHhcCCCcEEEECCCC
Confidence            22  1379999999984

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.022  Score=58.13  Aligned_cols=83  Identities=18%  Similarity=0.275  Sum_probs=54.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~  233 (356)
                      +.+++|+||+|++|..++..+...|++|++++++++..      +++.+.++ ..+..   ...|..+..++.+.+.+..
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~  443 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEAL------DELVAEIR-AKGGTAHAYTCDLTDSAAVDHTVKDIL  443 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999998888899999999987765      12222233 22322   1234444323333333322


Q ss_pred             C--CCccEEEeCCCc
Q 018404          234 P--EGIDIYFEHVGG  246 (356)
Q Consensus       234 ~--~~~d~vid~~g~  246 (356)
                      .  +++|++|.+.|.
T Consensus       444 ~~~g~id~li~~Ag~  458 (657)
T PRK07201        444 AEHGHVDYLVNNAGR  458 (657)
T ss_pred             HhcCCCCEEEECCCC
Confidence            1  369999999883

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.23  E-value=0.049  Score=52.31  Aligned_cols=75  Identities=24%  Similarity=0.372  Sum_probs=54.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR  231 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  231 (356)
                      ...++++|+|.| +|.+|..+++.++..| .+|+++.++.++.          +.+.+++|.. .++..   ++.+.+. 
T Consensus       176 ~~l~~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra----------~~la~~~g~~-~i~~~---~l~~~l~-  239 (417)
T TIGR01035       176 GSLKGKKALLIG-AGEMGELVAKHLLRKGVGKILIANRTYERA----------EDLAKELGGE-AVKFE---DLEEYLA-  239 (417)
T ss_pred             CCccCCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHH----------HHHHHHcCCe-EeeHH---HHHHHHh-
Confidence            345689999999 7999999999999999 5899999988775          4343267653 33221   2333332 


Q ss_pred             hCCCCccEEEeCCCch
Q 018404          232 CFPEGIDIYFEHVGGK  247 (356)
Q Consensus       232 ~~~~~~d~vid~~g~~  247 (356)
                          ++|+||+|+|..
T Consensus       240 ----~aDvVi~aT~s~  251 (417)
T TIGR01035       240 ----EADIVISSTGAP  251 (417)
T ss_pred             ----hCCEEEECCCCC
Confidence                589999999873

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.027  Score=49.52  Aligned_cols=88  Identities=15%  Similarity=0.131  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|...+..+...|++|+.+.+...+.  .+...++.+.+. ..+.. ..  .|..+.+.+.+.+.+.
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRG--RAEADAVAAGIE-AAGGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCccccc--HHHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            356899999999999999998889999998876542221  111122223333 33332 12  2333321233333322


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|.+|.+.|.
T Consensus        82 ~~~~~~~d~vi~~ag~   97 (249)
T PRK12827         82 VEEFGRLDILVNNAGI   97 (249)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            1  1368999999884

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.20  E-value=0.051  Score=47.68  Aligned_cols=110  Identities=21%  Similarity=0.277  Sum_probs=73.8

Q ss_pred             HHHHHH-HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhc---CCCEE
Q 018404          142 MTAWAG-FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKF---GFDDA  216 (356)
Q Consensus       142 ~tA~~~-l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~v  216 (356)
                      ...|.- +.......+|++||=.+  +|.|..+..+++..| ++|++++.|++-+          +..+++.   |... 
T Consensus        36 ~~~Wr~~~i~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML----------~~a~~k~~~~~~~~-  102 (238)
T COG2226          36 HRLWRRALISLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESML----------EVAREKLKKKGVQN-  102 (238)
T ss_pred             hHHHHHHHHHhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHH----------HHHHHHhhccCccc-
Confidence            344442 33334556899988775  788999999999996 4999999999887          5555332   3221 


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCc-------hHHHHHHHhhccCCeEEEEcc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGG-------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      +.+-.. + ++.+- +-+..||+|.-+.|-       ..++++.|.|+|+|+++.+..
T Consensus       103 i~fv~~-d-Ae~LP-f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~  157 (238)
T COG2226         103 VEFVVG-D-AENLP-FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEF  157 (238)
T ss_pred             eEEEEe-c-hhhCC-CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEc
Confidence            222111 1 12222 223378999887773       478999999999999998876

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.20  E-value=0.086  Score=47.50  Aligned_cols=93  Identities=15%  Similarity=0.167  Sum_probs=60.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc---CCCEEEecCCcccHHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF---GFDDAFNYKEENDLDAALK  230 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~  230 (356)
                      ..++.+++|.| +|++|.+++..+...|++|+++.++.++.          +.+.+.+   +....+.      +.+   
T Consensus       114 ~~~~k~vliiG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~----------~~la~~~~~~~~~~~~~------~~~---  173 (270)
T TIGR00507       114 LRPNQRVLIIG-AGGAARAVALPLLKADCNVIIANRTVSKA----------EELAERFQRYGEIQAFS------MDE---  173 (270)
T ss_pred             CccCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHHhhcCceEEec------hhh---
Confidence            34578999999 58999999988888899999999887775          3333233   2212211      111   


Q ss_pred             HhCCCCccEEEeCCCchHHH------HHHHhhccCCeEEEEcc
Q 018404          231 RCFPEGIDIYFEHVGGKMLD------AVLLNMRLHGRIAACGM  267 (356)
Q Consensus       231 ~~~~~~~d~vid~~g~~~~~------~~~~~l~~~G~~v~~g~  267 (356)
                       .....+|+||+|++.....      .....++++..++.+.+
T Consensus       174 -~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y  215 (270)
T TIGR00507       174 -LPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY  215 (270)
T ss_pred             -hcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence             1112589999999863211      12345777777777755

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.19  E-value=0.05  Score=49.23  Aligned_cols=95  Identities=18%  Similarity=0.139  Sum_probs=61.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      ..+.+|+|+| +|++|.+++..+...| .+|+++.|+.++.          +.+.++++....+.. .. +..+.+    
T Consensus       121 ~~~k~vlVlG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a----------~~l~~~~~~~~~~~~-~~-~~~~~~----  183 (278)
T PRK00258        121 LKGKRILILG-AGGAARAVILPLLDLGVAEITIVNRTVERA----------EELAKLFGALGKAEL-DL-ELQEEL----  183 (278)
T ss_pred             CCCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHH----------HHHHHHhhhccceee-cc-cchhcc----
Confidence            3567899999 6999999999999999 5999999998876          555434432110111 10 111111    


Q ss_pred             CCCccEEEeCCCchHH------HHHHHhhccCCeEEEEcc
Q 018404          234 PEGIDIYFEHVGGKML------DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       234 ~~~~d~vid~~g~~~~------~~~~~~l~~~G~~v~~g~  267 (356)
                       ..+|+||+|+.....      ......+.++..++.+-.
T Consensus       184 -~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY  222 (278)
T PRK00258        184 -ADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIY  222 (278)
T ss_pred             -ccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence             258999999875321      122456777777776644

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.19  E-value=0.03  Score=49.12  Aligned_cols=84  Identities=25%  Similarity=0.332  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      +..+|||+||+|++|..+++.+...|++|+++.++..+.     .+.+.+.+. ..+.. ..  .|..+.+++.+.+.+.
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~   78 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEA-----AEELVEAVE-ALGRRAQAVQADVTDKAALEAAVAAA   78 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHH-----HHHHHHHHH-hcCCceEEEECCcCCHHHHHHHHHHH
Confidence            346899999999999999999999999988877665532     011112222 23321 11  2333332333333332


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|.+|.+.|
T Consensus        79 ~~~~~~id~vi~~ag   93 (249)
T PRK12825         79 VERFGRIDILVNNAG   93 (249)
T ss_pred             HHHcCCCCEEEECCc
Confidence            21  36899999887

>PRK08264 short chain dehydrogenase; Validated

Probab=96.18  E-value=0.023  Score=49.82  Aligned_cols=77  Identities=18%  Similarity=0.200  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~  233 (356)
                      .+.+++|+||+|++|..+++.+...|+ +|+++.++.++.          +. . .-.+.. ..|..+...+.+.+.+. 
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~----------~~-~-~~~~~~~~~D~~~~~~~~~~~~~~-   71 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV----------TD-L-GPRVVPLQLDVTDPASVAAAAEAA-   71 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhh----------hh-c-CCceEEEEecCCCHHHHHHHHHhc-
Confidence            457899999999999999999999999 999999886664          32 1 111211 23443331333333322 


Q ss_pred             CCCccEEEeCCCc
Q 018404          234 PEGIDIYFEHVGG  246 (356)
Q Consensus       234 ~~~~d~vid~~g~  246 (356)
                       +.+|++|.+.|.
T Consensus        72 -~~id~vi~~ag~   83 (238)
T PRK08264         72 -SDVTILVNNAGI   83 (238)
T ss_pred             -CCCCEEEECCCc
Confidence             258999998886

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.18  E-value=0.038  Score=50.69  Aligned_cols=84  Identities=17%  Similarity=0.226  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc-hhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE-KVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+||++++|.+.++.+...|++|++.+++.. ..      +++.+.++ ..|....   .|..+.+...+.+.+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~------~~~~~~i~-~~g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDA------SDVLDEIR-AAGAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHH------HHHHHHHH-hcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4679999999999999999988889999998876532 22      12223444 4443211   233332122222221


Q ss_pred             hC-CCCccEEEeCCCc
Q 018404          232 CF-PEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~-~~~~d~vid~~g~  246 (356)
                      .. .+++|++|.+.|.
T Consensus        84 ~~~~g~iD~li~nAG~   99 (306)
T PRK07792         84 AVGLGGLDIVVNNAGI   99 (306)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            11 2479999998884

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.14  E-value=0.033  Score=51.20  Aligned_cols=109  Identities=15%  Similarity=0.174  Sum_probs=69.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE----EEecCCcccHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD----AFNYKEENDLDAALK  230 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----vv~~~~~~~~~~~~~  230 (356)
                      ..|.+++|+|+++|+|..++.-+...|++|+.++|+.++.      .++++.+..+.....    .+|-.+.........
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~------~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~  106 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERG------EEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAE  106 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHH------HHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHH
Confidence            3467999999999999999999999999999999998765      233333431222222    233333212222222


Q ss_pred             HhC--CCCccEEEeCCCc------------------------hHHHHHHHhhccC--CeEEEEcccc
Q 018404          231 RCF--PEGIDIYFEHVGG------------------------KMLDAVLLNMRLH--GRIAACGMIS  269 (356)
Q Consensus       231 ~~~--~~~~d~vid~~g~------------------------~~~~~~~~~l~~~--G~~v~~g~~~  269 (356)
                      ++.  ..+.|+.|++.|-                        -..+.++..|+..  +|+|.+....
T Consensus       107 ~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~  173 (314)
T KOG1208|consen  107 EFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL  173 (314)
T ss_pred             HHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence            222  1278999998882                        0234556666655  8999888743

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.12  E-value=0.13  Score=46.54  Aligned_cols=107  Identities=15%  Similarity=0.204  Sum_probs=73.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc--C-C-CEEEecCCccc---HHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF--G-F-DDAFNYKEEND---LDA  227 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~--g-~-~~vv~~~~~~~---~~~  227 (356)
                      ..+..|+|+|.-+|.|..++.-+...|..|++.+-.++..          +.++.+.  + . +..+|-.++++   ..+
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ga----------e~L~~~~~s~rl~t~~LDVT~~esi~~a~~   96 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGA----------ESLRGETKSPRLRTLQLDVTKPESVKEAAQ   96 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchH----------HHHhhhhcCCcceeEeeccCCHHHHHHHHH
Confidence            3456799999999999999999999999999999777765          5554222  1 1 23445444322   334


Q ss_pred             HHHHhCCC-CccEEEeCCCc---------------------------hHHHHHHHhhcc-CCeEEEEcccccc
Q 018404          228 ALKRCFPE-GIDIYFEHVGG---------------------------KMLDAVLLNMRL-HGRIAACGMISQY  271 (356)
Q Consensus       228 ~~~~~~~~-~~d~vid~~g~---------------------------~~~~~~~~~l~~-~G~~v~~g~~~~~  271 (356)
                      .+++..+. +.-.++++.|-                           ...+..+.++++ .||+|.+++..+.
T Consensus        97 ~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR  169 (322)
T KOG1610|consen   97 WVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR  169 (322)
T ss_pred             HHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence            45666666 88999999981                           122344555655 5999999987764

>PRK07102 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.046  Score=48.09  Aligned_cols=37  Identities=14%  Similarity=0.162  Sum_probs=33.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      .+++|+||+|++|...++.+...|++|+++++++++.
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~   38 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERL   38 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence            4799999999999999999888999999999887664

>PLN03075 nicotianamine synthase; Provisional

Probab=96.09  E-value=0.056  Score=48.96  Aligned_cols=97  Identities=9%  Similarity=0.012  Sum_probs=65.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhh----cCCCEEEecCCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNK----FGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~  229 (356)
                      +.++|+-.| +|..|+.++-+++.+  +.+++.++.+++..          +.+++.    .|...-+..... +..+..
T Consensus       123 ~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai----------~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~  190 (296)
T PLN03075        123 VPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSAN----------DVARRLVSSDPDLSKRMFFHTA-DVMDVT  190 (296)
T ss_pred             CCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHH----------HHHHHHhhhccCccCCcEEEEC-chhhcc
Confidence            778999999 999999888888766  55899999998876          444422    333222333222 222211


Q ss_pred             HHhCCCCccEEEeCC------Cc--hHHHHHHHhhccCCeEEEEc
Q 018404          230 KRCFPEGIDIYFEHV------GG--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       230 ~~~~~~~~d~vid~~------g~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ..  .+++|+||-.+      ..  ..+....+.|+|||.++.-.
T Consensus       191 ~~--l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        191 ES--LKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             cc--cCCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            11  13799999875      22  47789999999999988554

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.09  E-value=0.025  Score=49.96  Aligned_cols=79  Identities=15%  Similarity=0.189  Sum_probs=49.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-cchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHH-
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-REKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKR-  231 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~-  231 (356)
                      +.+++|+||+|++|..++..+...|++|+.+.++ .++.          +.+.++++.. .  ..|..+..++.+.+.+ 
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAA----------EALADELGDRAIALQADVTDREQVQAMFATA   74 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHH----------HHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            5689999999999999999988899999887653 3333          3333244321 1  1243332133333333 


Q ss_pred             --hCCCCccEEEeCCC
Q 018404          232 --CFPEGIDIYFEHVG  245 (356)
Q Consensus       232 --~~~~~~d~vid~~g  245 (356)
                        ..++++|++|.+.|
T Consensus        75 ~~~~g~~id~li~~ag   90 (253)
T PRK08642         75 TEHFGKPITTVVNNAL   90 (253)
T ss_pred             HHHhCCCCeEEEECCC
Confidence              22224999999876

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.08  E-value=0.068  Score=48.21  Aligned_cols=94  Identities=16%  Similarity=0.099  Sum_probs=65.0

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +||+....+..+.+..---.|.+|+|.|.+.-+|.-+++++...|++|++..+....                       
T Consensus       138 ~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~-----------------------  194 (286)
T PRK14175        138 VPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKD-----------------------  194 (286)
T ss_pred             CCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchh-----------------------
Confidence            455555555555443323468999999977779999999999999999987753211                       


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCch-HHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~  268 (356)
                              +.+.++     .+|+||.++|.. .+..  ..++++..++.+|..
T Consensus       195 --------l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~  232 (286)
T PRK14175        195 --------MASYLK-----DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT  232 (286)
T ss_pred             --------HHHHHh-----hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence                    111222     278999999984 4443  458888888899874

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.05  E-value=0.059  Score=50.60  Aligned_cols=90  Identities=11%  Similarity=0.054  Sum_probs=53.9

Q ss_pred             CCCCEEEEecCCchHHHH--HHHHHHHcCCEEEEEeCCcchhccc------cchhHHHHHHHhhcCCC-EEE--ecCCcc
Q 018404          155 KKGEYIYVSAASGAVGQL--VGQFAKLMGCYVVGSAGSREKVWLI------PMQSQLVELLKNKFGFD-DAF--NYKEEN  223 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~--ai~la~~~g~~Vi~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~-~vv--~~~~~~  223 (356)
                      ..++++||+|+++++|++  .++.+ ..|++|+++....+....-      -+++++.+.++ +.|.. ..+  |-.+.+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence            446899999999999999  55666 8899988887533221000      02233445565 66653 222  333321


Q ss_pred             c---HHHHHHHhCCCCccEEEeCCCch
Q 018404          224 D---LDAALKRCFPEGIDIYFEHVGGK  247 (356)
Q Consensus       224 ~---~~~~~~~~~~~~~d~vid~~g~~  247 (356)
                      .   +.+.+.+.. |++|+++.+++..
T Consensus       117 ~v~~lie~I~e~~-G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDL-GQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhc-CCCCEEEECCccC
Confidence            2   333344433 4799999998864

>PRK04148 hypothetical protein; Provisional

Probab=96.04  E-value=0.037  Score=43.89  Aligned_cols=87  Identities=16%  Similarity=0.083  Sum_probs=55.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      .++.++++.| .| .|...+..+..+|.+|++++.+++..          +.++ +.+...+.+.--.+++  .+-    
T Consensus        15 ~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV----------~~a~-~~~~~~v~dDlf~p~~--~~y----   75 (134)
T PRK04148         15 GKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAV----------EKAK-KLGLNAFVDDLFNPNL--EIY----   75 (134)
T ss_pred             ccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHH----------HHHH-HhCCeEEECcCCCCCH--HHH----
Confidence            4568899999 77 88766666668899999999999987          8887 7776544432111011  111    


Q ss_pred             CCccEEEeCCCch-HHHHHHHhhccCC
Q 018404          235 EGIDIYFEHVGGK-MLDAVLLNMRLHG  260 (356)
Q Consensus       235 ~~~d~vid~~g~~-~~~~~~~~l~~~G  260 (356)
                      +++|++..+--.. .....++..++-|
T Consensus        76 ~~a~liysirpp~el~~~~~~la~~~~  102 (134)
T PRK04148         76 KNAKLIYSIRPPRDLQPFILELAKKIN  102 (134)
T ss_pred             hcCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence            2578888777773 3344444444433

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.03  E-value=0.042  Score=48.45  Aligned_cols=81  Identities=16%  Similarity=0.160  Sum_probs=49.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHhC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~~  233 (356)
                      .+++|.||+|++|..+++.+...|++|+.+.+ +.++.      +++.+.++ ..+.. .  .+|..+..++.+.+.+..
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAA------EETADAVR-AAGGRACVVAGDVANEADVIAMFDAVQ   75 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHH-hcCCcEEEEEeccCCHHHHHHHHHHHH
Confidence            48999999999999999999889999887654 33332      11122333 33332 1  123333223333333322


Q ss_pred             --CCCccEEEeCCC
Q 018404          234 --PEGIDIYFEHVG  245 (356)
Q Consensus       234 --~~~~d~vid~~g  245 (356)
                        -+++|++|.+.|
T Consensus        76 ~~~~~id~li~~ag   89 (248)
T PRK06947         76 SAFGRLDALVNNAG   89 (248)
T ss_pred             HhcCCCCEEEECCc
Confidence              136899999887

>PRK04457 spermidine synthase; Provisional

Probab=96.02  E-value=0.29  Score=43.86  Aligned_cols=96  Identities=13%  Similarity=0.151  Sum_probs=63.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCC---CEEEecCCcccHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF---DDAFNYKEENDLDAALK  230 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~  230 (356)
                      .+..+||++|.  |.|..+..+++.. +++|++++.+++-.          +.+++.++.   +.-+..... +..+.+.
T Consensus        65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi----------~~A~~~f~~~~~~~rv~v~~~-Da~~~l~  131 (262)
T PRK04457         65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVI----------AVARNHFELPENGERFEVIEA-DGAEYIA  131 (262)
T ss_pred             CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHH----------HHHHHHcCCCCCCCceEEEEC-CHHHHHH
Confidence            45678999993  4477888888877 67999999998887          777744443   111111112 4444554


Q ss_pred             HhCCCCccEEEe-CC-C---------chHHHHHHHhhccCCeEEE
Q 018404          231 RCFPEGIDIYFE-HV-G---------GKMLDAVLLNMRLHGRIAA  264 (356)
Q Consensus       231 ~~~~~~~d~vid-~~-g---------~~~~~~~~~~l~~~G~~v~  264 (356)
                      +. .+.+|+||- +. +         .+.+..+.+.|+++|.++.
T Consensus       132 ~~-~~~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi  175 (262)
T PRK04457        132 VH-RHSTDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV  175 (262)
T ss_pred             hC-CCCCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence            33 247898873 21 1         1467889999999999986

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.02  E-value=0.041  Score=48.49  Aligned_cols=84  Identities=23%  Similarity=0.279  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-cchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-REKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+||+|++|..++..+...|++|+++.+. ++..      +++.+.++ ..+.. ..  +|..+...+.+.+.+
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~------~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~   77 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAA------ENLVNELG-KEGHDVYAVQADVSKVEDANRLVEE   77 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHH------HHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHH
Confidence            36899999999999999999888899999876543 2332      11223333 33332 12  233332233333333


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +.+|.+|.+.|.
T Consensus        78 ~~~~~~~id~vi~~ag~   94 (247)
T PRK12935         78 AVNHFGKVDILVNNAGI   94 (247)
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            322  368999999885

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=96.02  E-value=0.03  Score=49.51  Aligned_cols=109  Identities=14%  Similarity=0.212  Sum_probs=68.1

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL  225 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  225 (356)
                      +....++.||++|+=.|  .|.|.++..|++..|-  +|+.....+++.      +.+.+.++ .+|....+..... ++
T Consensus        32 I~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~------~~A~~n~~-~~gl~~~v~~~~~-Dv  101 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRA------EKARKNFE-RHGLDDNVTVHHR-DV  101 (247)
T ss_dssp             HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHH------HHHHHHHH-HTTCCTTEEEEES--G
T ss_pred             HHHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHH------HHHHHHHH-HcCCCCCceeEec-ce
Confidence            33568899999999887  5668888899998864  999999998886      33344555 5676422211111 21


Q ss_pred             H-HHHHHhCCCCccEEEeCCCc--hHHHHHHHhh-ccCCeEEEEc
Q 018404          226 D-AALKRCFPEGIDIYFEHVGG--KMLDAVLLNM-RLHGRIAACG  266 (356)
Q Consensus       226 ~-~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l-~~~G~~v~~g  266 (356)
                      . +...+-..+.+|.||--...  ..+..+.+.| +++|+++.+.
T Consensus       102 ~~~g~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs  146 (247)
T PF08704_consen  102 CEEGFDEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS  146 (247)
T ss_dssp             GCG--STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred             ecccccccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence            1 11111111368888765555  6899999999 8999999884

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.00  E-value=0.026  Score=46.94  Aligned_cols=99  Identities=18%  Similarity=0.193  Sum_probs=64.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec-CC---------------
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY-KE---------------  221 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~-~~---------------  221 (356)
                      -+|+|+| +|.+|+.|+.+++.+|++|+..+...++.          +.+. ..+...+... .+               
T Consensus        21 ~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~----------~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~   88 (168)
T PF01262_consen   21 AKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERL----------RQLE-SLGAYFIEVDYEDHLERKDFDKADYYEH   88 (168)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHH----------HHHH-HTTTEESEETTTTTTTSB-CCHHHCHHH
T ss_pred             eEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHH----------Hhhh-cccCceEEEcccccccccccchhhhhHH
Confidence            6899999 89999999999999999999999988877          6666 6655333221 00               


Q ss_pred             cccHHHHHHHhCCCCccEEEeCCC--c---h--HHHHHHHhhccCCeEEEEcccc
Q 018404          222 ENDLDAALKRCFPEGIDIYFEHVG--G---K--MLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       222 ~~~~~~~~~~~~~~~~d~vid~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      ...+...+.+... .+|++|-+.=  +   +  .....++.|+++..++.+..-.
T Consensus        89 ~~~~~~~f~~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~  142 (168)
T PF01262_consen   89 PESYESNFAEFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ  142 (168)
T ss_dssp             CCHHHHHHHHHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred             HHHhHHHHHHHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence            0022333333221 3788885221  1   1  2378899999999999887533

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK06123 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.05  Score=47.93  Aligned_cols=83  Identities=17%  Similarity=0.203  Sum_probs=50.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-cchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-REKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      +.+++|+||+|++|..+++.+...|++|+...+. +++.      .++.+.++ +.+...   ..|..+...+.+.+.+.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~------~~~~~~l~-~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAA------EAVVQAIR-RQGGEALAVAADVADEADVLRLFEAV   74 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHH------HHHHHHHH-hCCCcEEEEEeccCCHHHHHHHHHHH
Confidence            4589999999999999998888889988776543 3332      11223333 344321   22433322333333333


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +.+|++|.+.|.
T Consensus        75 ~~~~~~id~li~~ag~   90 (248)
T PRK06123         75 DRELGRLDALVNNAGI   90 (248)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            21  368999998874

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.98  E-value=0.045  Score=52.04  Aligned_cols=91  Identities=20%  Similarity=0.204  Sum_probs=59.1

Q ss_pred             EEEecCCchHHHHHHHHHHHcC-C-EEEEEeCCcchhccccchhHHHHHHHhh-cCC---CEEEecCCcccHHHHHHHhC
Q 018404          160 IYVSAASGAVGQLVGQFAKLMG-C-YVVGSAGSREKVWLIPMQSQLVELLKNK-FGF---DDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g-~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~-~g~---~~vv~~~~~~~~~~~~~~~~  233 (356)
                      |+|+|+ |.+|..+++++...+ . +|++.+++.++.          +.+.++ .+.   ...+|..+.   . .+.++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~----------~~~~~~~~~~~~~~~~~d~~~~---~-~l~~~~   65 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKA----------ERLAEKLLGDRVEAVQVDVNDP---E-SLAELL   65 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHH----------HHHHT--TTTTEEEEE--TTTH---H-HHHHHH
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHH----------HHHHhhccccceeEEEEecCCH---H-HHHHHH
Confidence            789997 999999999888885 4 899999999987          666523 222   233444432   1 244443


Q ss_pred             CCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEc
Q 018404          234 PEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       234 ~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  266 (356)
                      . +.|+|++|+|. ....-+-.|+..+-+++...
T Consensus        66 ~-~~dvVin~~gp~~~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   66 R-GCDVVINCAGPFFGEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             T-TSSEEEE-SSGGGHHHHHHHHHHHT-EEEESS
T ss_pred             h-cCCEEEECCccchhHHHHHHHHHhCCCeeccc
Confidence            3 36999999998 45556666778888888843

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=95.97  E-value=0.046  Score=45.84  Aligned_cols=80  Identities=15%  Similarity=0.165  Sum_probs=53.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--CE-E--EecCCcccHHHHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--DD-A--FNYKEENDLDAALKR  231 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~-v--v~~~~~~~~~~~~~~  231 (356)
                      ....+|.||++|+|.+..|++...|++|.+.+...+..         ++.++ .++.  ++ .  .|-.+..+....+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A---------~ata~-~L~g~~~h~aF~~DVS~a~~v~~~l~e   83 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAA---------EATAG-DLGGYGDHSAFSCDVSKAHDVQNTLEE   83 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhH---------HHHHh-hcCCCCccceeeeccCcHHHHHHHHHH
Confidence            35679999999999999999999999999998776654         13333 5553  22 2  233332132222443


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +.++++++|.|-
T Consensus        84 ~~k~~g~psvlVncAGI  100 (256)
T KOG1200|consen   84 MEKSLGTPSVLVNCAGI  100 (256)
T ss_pred             HHHhcCCCcEEEEcCcc
Confidence            322  378999999993

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=95.94  E-value=0.046  Score=48.05  Aligned_cols=82  Identities=16%  Similarity=0.167  Sum_probs=50.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGS-AGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~  233 (356)
                      .+++|+||+|++|...++.+...|++|+++ .++.++.      .++...++ ..+..   ...|..+.+.+.+.+.+..
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~D~~d~~~i~~~~~~~~   74 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAA------QEVVNLIT-QAGGKAFVLQADISDENQVVAMFTAID   74 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHH------HHHHHHHH-hCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            379999999999999999888899998875 4444433      11112233 33321   1234444323444444432


Q ss_pred             --CCCccEEEeCCCc
Q 018404          234 --PEGIDIYFEHVGG  246 (356)
Q Consensus       234 --~~~~d~vid~~g~  246 (356)
                        .+++|++|.+.|.
T Consensus        75 ~~~~~id~vi~~ag~   89 (247)
T PRK09730         75 QHDEPLAALVNNAGI   89 (247)
T ss_pred             HhCCCCCEEEECCCC
Confidence              2379999999984

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.94  E-value=0.096  Score=47.55  Aligned_cols=38  Identities=13%  Similarity=0.081  Sum_probs=34.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~  194 (356)
                      .+.+|+|+| +|++|.+++..+..+|+ +|+++.++.++.
T Consensus       126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka  164 (284)
T PRK12549        126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARA  164 (284)
T ss_pred             cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            467999999 89999999999999998 899999988876

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.038  Score=47.90  Aligned_cols=76  Identities=13%  Similarity=0.224  Sum_probs=48.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE--ecCCcccHHHHHHHhCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF--NYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~~~~~~~  235 (356)
                      .+++|+||+|++|...+..+... ++|++++++.++.          +.+.+......++  |..+...+.+.+.+.  +
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~   70 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERL----------DELAAELPGATPFPVDLTDPEAIAAAVEQL--G   70 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHH----------HHHHHHhccceEEecCCCCHHHHHHHHHhc--C
Confidence            58999999999999888877766 9999999987765          4444222111222  333321222222221  2


Q ss_pred             CccEEEeCCCc
Q 018404          236 GIDIYFEHVGG  246 (356)
Q Consensus       236 ~~d~vid~~g~  246 (356)
                      ++|.+|.+.|.
T Consensus        71 ~id~vi~~ag~   81 (227)
T PRK08219         71 RLDVLVHNAGV   81 (227)
T ss_pred             CCCEEEECCCc
Confidence            69999999884

>PLN00015 protochlorophyllide reductase

Probab=95.90  E-value=0.03  Score=51.47  Aligned_cols=76  Identities=13%  Similarity=0.105  Sum_probs=49.5

Q ss_pred             EEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCC---C---EEEecCCcccHHHHHHHhC
Q 018404          161 YVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGF---D---DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       161 lI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~---~vv~~~~~~~~~~~~~~~~  233 (356)
                      +|+||++++|.++++.+...| ++|+.++++.++.          +.+.++++.   .   ..+|..+...+...+.+..
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~----------~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   70 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKA----------ERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFR   70 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHH----------HHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            589999999999998888889 8999999887765          333323321   1   1235444323333333332


Q ss_pred             --CCCccEEEeCCCc
Q 018404          234 --PEGIDIYFEHVGG  246 (356)
Q Consensus       234 --~~~~d~vid~~g~  246 (356)
                        .+++|++|.+.|.
T Consensus        71 ~~~~~iD~lInnAG~   85 (308)
T PLN00015         71 RSGRPLDVLVCNAAV   85 (308)
T ss_pred             hcCCCCCEEEECCCc
Confidence              2378999998873

>PRK07578 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.11  Score=44.14  Aligned_cols=33  Identities=27%  Similarity=0.205  Sum_probs=27.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +++|.||+|++|.+.+..+... ++|+.++++..
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~   34 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG   34 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC
Confidence            6899999999999888777666 89999887643

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=95.89  E-value=0.085  Score=46.03  Aligned_cols=80  Identities=24%  Similarity=0.303  Sum_probs=50.1

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-chhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhCC-
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-EKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCFP-  234 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~~-  234 (356)
                      ++|+|++|++|..++..+...|++|++++++. ++.      .++.+.++ +.+..   ...|..+...+.+.+.+... 
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGA------EEVVEELK-AYGVKALGVVCDVSDREDVKAVVEEIEEE   73 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHH------HHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            58999999999999999888899999998765 222      12223344 44532   22344443223333332211 


Q ss_pred             -CCccEEEeCCCc
Q 018404          235 -EGIDIYFEHVGG  246 (356)
Q Consensus       235 -~~~d~vid~~g~  246 (356)
                       +++|.++.+.|.
T Consensus        74 ~~~id~vi~~ag~   86 (239)
T TIGR01830        74 LGPIDILVNNAGI   86 (239)
T ss_pred             hCCCCEEEECCCC
Confidence             368999998884

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=95.89  E-value=0.041  Score=51.44  Aligned_cols=38  Identities=18%  Similarity=0.294  Sum_probs=33.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      +|.+|||+||+|.+|..+++.+...|.+|++++++...
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~   40 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPT   40 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCcc
Confidence            46799999999999999999999999999999877654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.83  E-value=0.12  Score=45.31  Aligned_cols=105  Identities=18%  Similarity=0.235  Sum_probs=71.4

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  227 (356)
                      ...++.+|++|+=.|  .|.|.+++-||+..|.  +|+.....++..      ..+.+.++ ++|....+..... |..+
T Consensus        88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~------k~A~~Nl~-~~~l~d~v~~~~~-Dv~~  157 (256)
T COG2519          88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFA------KTARENLS-EFGLGDRVTLKLG-DVRE  157 (256)
T ss_pred             HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHH------HHHHHHHH-HhccccceEEEec-cccc
Confidence            357899999998877  4668888899998875  999999887776      12223444 5565432333222 3222


Q ss_pred             HHHHhCCCCccEEEeCCCc--hHHHHHHHhhccCCeEEEEcc
Q 018404          228 ALKRCFPEGIDIYFEHVGG--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+-+   ..+|.+|--...  ..+..+.+.|+++|+++.+-.
T Consensus       158 ~~~~---~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P  196 (256)
T COG2519         158 GIDE---EDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP  196 (256)
T ss_pred             cccc---cccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence            2211   168888765555  689999999999999998843

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=95.81  E-value=0.074  Score=44.74  Aligned_cols=83  Identities=16%  Similarity=0.164  Sum_probs=47.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHhCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~~~  234 (356)
                      ++||+||.|++|+..++.+...++ +++.+.++....   ++..++-+.++ +.|...   -.|..+.+.+.+.+.+...
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~---~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPS---AEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQ   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGS---TTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCcc---HHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHh
Confidence            689999999999999988888866 999999883221   22233445666 556531   1233333234444444332


Q ss_pred             --CCccEEEeCCC
Q 018404          235 --EGIDIYFEHVG  245 (356)
Q Consensus       235 --~~~d~vid~~g  245 (356)
                        +.++.||.+.|
T Consensus        78 ~~~~i~gVih~ag   90 (181)
T PF08659_consen   78 RFGPIDGVIHAAG   90 (181)
T ss_dssp             TSS-EEEEEE---
T ss_pred             ccCCcceeeeeee
Confidence              26788888777

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.79  E-value=0.14  Score=44.44  Aligned_cols=112  Identities=11%  Similarity=0.079  Sum_probs=68.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC------cchhccc--------cchhHHHHHHHhhcCCCEEEecCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGS------REKVWLI--------PMQSQLVELLKNKFGFDDAFNYKE  221 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~------~~~~~~~--------~~~~~~~~~~~~~~g~~~vv~~~~  221 (356)
                      ..+|+|.| .||||-+++..+.+-|+ ++..++..      -++ ++.        |-.+.+++.++ +.....-++..+
T Consensus        30 ~~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NR-Qi~A~~~~iGk~Kv~vm~eri~-~InP~c~V~~~~  106 (263)
T COG1179          30 QAHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNR-QIHALLGDIGKPKVEVMKERIK-QINPECEVTAIN  106 (263)
T ss_pred             hCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccch-hhHhhhhhcccHHHHHHHHHHH-hhCCCceEeehH
Confidence            57899999 89999999999999888 66666532      122 111        22344555555 544432222222


Q ss_pred             cccHHHHHHHhCCCCccEEEeCCCc-hH-HHHHHHhhccCCeEEEEcccccc
Q 018404          222 ENDLDAALKRCFPEGIDIYFEHVGG-KM-LDAVLLNMRLHGRIAACGMISQY  271 (356)
Q Consensus       222 ~~~~~~~~~~~~~~~~d~vid~~g~-~~-~~~~~~~l~~~G~~v~~g~~~~~  271 (356)
                      ..-..+.+.++..+++|.|+||..+ .. ...+..|.+..=.+|..+..+++
T Consensus       107 ~f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~k  158 (263)
T COG1179         107 DFITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGGK  158 (263)
T ss_pred             hhhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccCC
Confidence            1012234666666689999999998 32 23334456666677877776554

>PLN00016 RNA-binding protein; Provisional

Probab=95.78  E-value=0.1  Score=49.37  Aligned_cols=105  Identities=13%  Similarity=0.123  Sum_probs=63.1

Q ss_pred             CCEEEEe----cCCchHHHHHHHHHHHcCCEEEEEeCCcchhcccc-chhHHHHHHHhhcCCCEEEecCCcccHHHHHHH
Q 018404          157 GEYIYVS----AASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIP-MQSQLVELLKNKFGFDDAFNYKEENDLDAALKR  231 (356)
Q Consensus       157 g~~VlI~----ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  231 (356)
                      ..+|||+    ||+|-+|..++..+...|.+|++++++....+.++ ...+.-..+. ..+...+ ..    ++.+ +.+
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v-~~----D~~d-~~~  124 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTV-WG----DPAD-VKS  124 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceEE-Ee----cHHH-HHh
Confidence            3689999    99999999999988888999999998865431000 0000001222 2344322 11    2222 322


Q ss_pred             hCCC-CccEEEeCCCc--hHHHHHHHhhccCC--eEEEEccc
Q 018404          232 CFPE-GIDIYFEHVGG--KMLDAVLLNMRLHG--RIAACGMI  268 (356)
Q Consensus       232 ~~~~-~~d~vid~~g~--~~~~~~~~~l~~~G--~~v~~g~~  268 (356)
                      .... ++|+||++.+.  ......++.++..|  ++|.++..
T Consensus       125 ~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        125 KVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             hhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            2223 79999999875  23455566665443  78877754

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.78  E-value=0.057  Score=46.37  Aligned_cols=92  Identities=10%  Similarity=0.060  Sum_probs=58.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|+|.| +|.+|...+..+...|++|+++.....+        ++.+.+. . +. ..+...   .+.+.-  +  .
T Consensus         9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~--------~l~~l~~-~-~~-i~~~~~---~~~~~~--l--~   69 (202)
T PRK06718          9 SNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELTE--------NLVKLVE-E-GK-IRWKQK---EFEPSD--I--V   69 (202)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCCH--------HHHHHHh-C-CC-EEEEec---CCChhh--c--C
Confidence            467999999 7999999998888899999988754322        1112222 1 21 111111   111110  0  2


Q ss_pred             CccEEEeCCCchHHHHHHHhhccCCeEEEEc
Q 018404          236 GIDIYFEHVGGKMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       236 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ++|+||-|++.+.++..+...+..+.++.+.
T Consensus        70 ~adlViaaT~d~elN~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         70 DAFLVIAATNDPRVNEQVKEDLPENALFNVI  100 (202)
T ss_pred             CceEEEEcCCCHHHHHHHHHHHHhCCcEEEC
Confidence            6899999999987777776666666666654

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.77  E-value=0.04  Score=54.08  Aligned_cols=73  Identities=12%  Similarity=0.104  Sum_probs=53.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHh
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++++|+|+| .|..|++++.+++..|++|++.+..+.+.          +.++ ++|+.. +...   ...+.+.  
T Consensus         8 ~~~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~----------~~l~-~~g~~~-~~~~---~~~~~l~--   69 (488)
T PRK03369          8 PLLPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDAL----------RPHA-ERGVAT-VSTS---DAVQQIA--   69 (488)
T ss_pred             cccCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHH----------HHHH-hCCCEE-EcCc---chHhHhh--
Confidence            356789999999 89999999999999999999988765555          5566 677743 2221   1122232  


Q ss_pred             CCCCccEEEeCCCc
Q 018404          233 FPEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~~~~d~vid~~g~  246 (356)
                         .+|+|+.+.|-
T Consensus        70 ---~~D~VV~SpGi   80 (488)
T PRK03369         70 ---DYALVVTSPGF   80 (488)
T ss_pred             ---cCCEEEECCCC
Confidence               37999998886

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.75  E-value=0.14  Score=47.62  Aligned_cols=87  Identities=26%  Similarity=0.324  Sum_probs=63.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++...           .... ..+..    +.   ++.+.+.+    
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~-----------~~~~-~~~~~----~~---~l~ell~~----  204 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKP-----------EAEK-ELGAE----YR---PLEELLRE----  204 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCCh-----------hhHH-HcCCE----ec---CHHHHHhh----
Confidence            478999999 8999999999999999999999877543           2222 44432    11   34444443    


Q ss_pred             CccEEEeCCCc-h----HH-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|+-+... +    .+ ...+..++++..+|.++.
T Consensus       205 -aDiV~l~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        205 -SDFVSLHVPLTKETYHMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             -CCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECcC
Confidence             7899988875 2    12 467788999999998876

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=95.71  E-value=0.068  Score=48.33  Aligned_cols=95  Identities=12%  Similarity=0.096  Sum_probs=61.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCC-CC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFP-EG  236 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~-~~  236 (356)
                      +|+|+||+|.+|..+++.+...|.+|.+++++.++.          .    ..+.. ...|+.+.+.+.+.++.... .+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~----------~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g   66 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS----------A----GPNEKHVKFDWLDEDTWDNPFSSDDGMEP   66 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc----------c----CCCCccccccCCCHHHHHHHHhcccCcCC
Confidence            489999999999999999888999999999987754          2    12322 23455554244444432211 25


Q ss_pred             -ccEEEeCCCc-----hHHHHHHHhhccCC--eEEEEcc
Q 018404          237 -IDIYFEHVGG-----KMLDAVLLNMRLHG--RIAACGM  267 (356)
Q Consensus       237 -~d~vid~~g~-----~~~~~~~~~l~~~G--~~v~~g~  267 (356)
                       +|.+|-+.+.     ......++.++..|  ++|.++.
T Consensus        67 ~~d~v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        67 EISAVYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             ceeEEEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence             8999987764     13344455555454  7877764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.67  E-value=0.11  Score=44.54  Aligned_cols=87  Identities=11%  Similarity=0.177  Sum_probs=51.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchh-----cc--------ccchhHHHHHHHhhcCCCEEEecCCc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKV-----WL--------IPMQSQLVELLKNKFGFDDAFNYKEE  222 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~-----~~--------~~~~~~~~~~~~~~~g~~~vv~~~~~  222 (356)
                      +.+|+|.| .|++|..+++.+..+|. +++.++...-+.     ++        -+-.+++++.++ ++....-+.....
T Consensus        21 ~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~-~~np~v~i~~~~~   98 (202)
T TIGR02356        21 NSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLR-ELNSDIQVTALKE   98 (202)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHH-HhCCCCEEEEehh
Confidence            46899999 99999999999999998 788777652110     00        012244455555 5443222221111


Q ss_pred             ccH-HHHHHHhCCCCccEEEeCCCch
Q 018404          223 NDL-DAALKRCFPEGIDIYFEHVGGK  247 (356)
Q Consensus       223 ~~~-~~~~~~~~~~~~d~vid~~g~~  247 (356)
                       .+ .+.+.+.. .++|+||+|..+.
T Consensus        99 -~i~~~~~~~~~-~~~D~Vi~~~d~~  122 (202)
T TIGR02356        99 -RVTAENLELLI-NNVDLVLDCTDNF  122 (202)
T ss_pred             -cCCHHHHHHHH-hCCCEEEECCCCH
Confidence             11 11223222 2599999999883

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.65  E-value=0.072  Score=43.37  Aligned_cols=94  Identities=20%  Similarity=0.218  Sum_probs=61.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRC  232 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~  232 (356)
                      .++.+++|.| .|++|...++.+...| .+|++..++.++.          +.+.++++... ..+..   +..+.+   
T Consensus        17 ~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~----------~~~~~~~~~~~~~~~~~---~~~~~~---   79 (155)
T cd01065          17 LKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKA----------KALAERFGELGIAIAYL---DLEELL---   79 (155)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHH----------HHHHHHHhhcccceeec---chhhcc---
Confidence            4568999999 5999999999888886 6899998887776          44432554321 01111   221111   


Q ss_pred             CCCCccEEEeCCCchHH-----HHHHHhhccCCeEEEEcc
Q 018404          233 FPEGIDIYFEHVGGKML-----DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~~-----~~~~~~l~~~G~~v~~g~  267 (356)
                        +++|+|+.|++....     ......++++..++.++.
T Consensus        80 --~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          80 --AEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             --ccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence              368999999987432     122345677777777765

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.63  E-value=0.16  Score=42.33  Aligned_cols=94  Identities=19%  Similarity=0.189  Sum_probs=60.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      +|.|+||+|-+|...++=|+..|-.|++++|++++.          ...+   +. .++..+-- +....-..+  .|+|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~----------~~~~---~~-~i~q~Dif-d~~~~a~~l--~g~D   64 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKL----------AARQ---GV-TILQKDIF-DLTSLASDL--AGHD   64 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhc----------cccc---cc-eeeccccc-ChhhhHhhh--cCCc
Confidence            578999999999999999999999999999999987          3322   11 11111100 111111111  2699


Q ss_pred             EEEeCCCch----------HHHHHHHhhccC--CeEEEEcccc
Q 018404          239 IYFEHVGGK----------MLDAVLLNMRLH--GRIAACGMIS  269 (356)
Q Consensus       239 ~vid~~g~~----------~~~~~~~~l~~~--G~~v~~g~~~  269 (356)
                      +||++.|..          ..+.....|+.-  -|++.+|..+
T Consensus        65 aVIsA~~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          65 AVISAFGAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             eEEEeccCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            999988853          223345555553  4788888644

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.61  E-value=0.12  Score=46.84  Aligned_cols=93  Identities=15%  Similarity=0.158  Sum_probs=64.1

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCcchhccccchhHHHHHHHhhcCCCE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFDD  215 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~  215 (356)
                      +||+....+..|....---.|.+|+|+|.++.+|.-++.++...|+.|++.. ++.+-.          +.++       
T Consensus       138 ~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~----------e~~~-------  200 (296)
T PRK14188        138 VPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLP----------AVCR-------  200 (296)
T ss_pred             cCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHH----------HHHh-------
Confidence            4555555555554433234699999999999999999999999999998873 332211          1111       


Q ss_pred             EEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccc
Q 018404          216 AFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       216 vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                                          ..|+|+-|+|. ..+...+  +++|..++.+|..
T Consensus       201 --------------------~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin  232 (296)
T PRK14188        201 --------------------RADILVAAVGRPEMVKGDW--IKPGATVIDVGIN  232 (296)
T ss_pred             --------------------cCCEEEEecCChhhcchhe--ecCCCEEEEcCCc
Confidence                                26788888888 3444433  8888888899863

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=95.60  E-value=0.059  Score=47.21  Aligned_cols=80  Identities=14%  Similarity=0.102  Sum_probs=48.5

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhC--C
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCF--P  234 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~--~  234 (356)
                      |+|+||+|++|..+++.+...|++|++++++.+..     .+++.+.++ +.+..   ..+|..+.+++...+.+..  .
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~-----~~~~~~~l~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSD-----AESVVSAIQ-AQGGNARLLQFDVADRVACRTLLEADIAEH   74 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHH-----HHHHHHHHH-HcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            58999999999999999999999999888654321     112223343 33432   1234443323333333221  2


Q ss_pred             CCccEEEeCCC
Q 018404          235 EGIDIYFEHVG  245 (356)
Q Consensus       235 ~~~d~vid~~g  245 (356)
                      +.+|.+|.+.|
T Consensus        75 ~~i~~li~~ag   85 (239)
T TIGR01831        75 GAYYGVVLNAG   85 (239)
T ss_pred             CCCCEEEECCC
Confidence            36899988877

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.54  E-value=0.24  Score=45.97  Aligned_cols=97  Identities=14%  Similarity=0.131  Sum_probs=63.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHH-HHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFA-KLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la-~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  232 (356)
                      ....++.|+| +|+.|...+..+ ...++ +|.+..+++++.      +++.+.++++++.. +..+.   ++.+.+.  
T Consensus       125 ~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a------~~~~~~~~~~~~~~-~~~~~---~~~~~~~--  191 (325)
T PRK08618        125 EDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKA------YAFAQEIQSKFNTE-IYVVN---SADEAIE--  191 (325)
T ss_pred             CCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHH------HHHHHHHHHhcCCc-EEEeC---CHHHHHh--
Confidence            3457899999 899998776544 45577 788888887776      23333333234543 22222   3444443  


Q ss_pred             CCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                         ..|+|+.|+++..-... +.++++-++..+|..
T Consensus       192 ---~aDiVi~aT~s~~p~i~-~~l~~G~hV~~iGs~  223 (325)
T PRK08618        192 ---EADIIVTVTNAKTPVFS-EKLKKGVHINAVGSF  223 (325)
T ss_pred             ---cCCEEEEccCCCCcchH-HhcCCCcEEEecCCC
Confidence               48999999998433333 889999999999873

>PRK07574 formate dehydrogenase; Provisional

Probab=95.53  E-value=0.32  Score=46.04  Aligned_cols=89  Identities=16%  Similarity=0.140  Sum_probs=63.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++....          +... .+|...    ..  ++.+.+.     
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~----------~~~~-~~g~~~----~~--~l~ell~-----  247 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPE----------EVEQ-ELGLTY----HV--SFDSLVS-----  247 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCch----------hhHh-hcCcee----cC--CHHHHhh-----
Confidence            467899999 89999999999999999999999876432          3333 455321    11  3444443     


Q ss_pred             CccEEEeCCCc-hH----H-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-KM----L-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~~----~-~~~~~~l~~~G~~v~~g~  267 (356)
                      ..|+|+-+... +.    + ...+..|+++..+|.++.
T Consensus       248 ~aDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        248 VCDVVTIHCPLHPETEHLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             cCCEEEEcCCCCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence            37999888874 22    2 356788999999998876

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.51  E-value=0.073  Score=47.34  Aligned_cols=89  Identities=16%  Similarity=0.073  Sum_probs=52.6

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchh-----ccccchhHHHHHHHhhcCCCE---EEecCCcccH
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKV-----WLIPMQSQLVELLKNKFGFDD---AFNYKEENDL  225 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~  225 (356)
                      +|.+++|+||+  +++|.+.+..+...|++|+.++++....     ...++..++.+.++ +.|...   .+|..+.++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHH
Confidence            47899999988  4999999999999999999876432100     00011223334455 455421   2233333233


Q ss_pred             HHHHHHhCC--CCccEEEeCCC
Q 018404          226 DAALKRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       226 ~~~~~~~~~--~~~d~vid~~g  245 (356)
                      .+.+.+...  +.+|++|.+.|
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag  105 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAA  105 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCC
Confidence            333333321  36899999887

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.50  E-value=0.15  Score=46.51  Aligned_cols=35  Identities=20%  Similarity=0.152  Sum_probs=30.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSR  191 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~  191 (356)
                      ++.+++|+|+ ||+|.+++..+...|++ |+++.++.
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            4679999995 89999999888889995 99999886

>PLN03139 formate dehydrogenase; Provisional

Probab=95.47  E-value=0.31  Score=46.12  Aligned_cols=89  Identities=24%  Similarity=0.262  Sum_probs=64.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++....          +... +.|+...    +  ++.+.+.+    
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~----------~~~~-~~g~~~~----~--~l~ell~~----  255 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDP----------ELEK-ETGAKFE----E--DLDAMLPK----  255 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcch----------hhHh-hcCceec----C--CHHHHHhh----
Confidence            477999999 99999999999999999999988765443          3333 4554211    1  44444443    


Q ss_pred             CccEEEeCCCc-h----HH-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|+-+... +    .+ ...+..|+++..+|.++.
T Consensus       256 -sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        256 -CDVVVINTPLTEKTRGMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             -CCEEEEeCCCCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence             7888887774 2    12 356788999999998876

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.45  E-value=0.27  Score=36.33  Aligned_cols=86  Identities=20%  Similarity=0.191  Sum_probs=58.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC---CEEEEE-eCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMG---CYVVGS-AGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g---~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      +|.|.| +|.+|.+.+.-+...|   .+|+.+ .+++++.          +.+.++++.... ..    +..+.+++   
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~----------~~~~~~~~~~~~-~~----~~~~~~~~---   61 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKA----------AELAKEYGVQAT-AD----DNEEAAQE---   61 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHH----------HHHHHHCTTEEE-SE----EHHHHHHH---
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHH----------HHHHHhhccccc-cC----ChHHhhcc---
Confidence            467777 9999999999999999   799955 8898887          776647775322 11    33445553   


Q ss_pred             CCccEEEeCCCchHHHHHHHhh---ccCCeEEEE
Q 018404          235 EGIDIYFEHVGGKMLDAVLLNM---RLHGRIAAC  265 (356)
Q Consensus       235 ~~~d~vid~~g~~~~~~~~~~l---~~~G~~v~~  265 (356)
                        .|+||-|+-...+...++.+   .++..++.+
T Consensus        62 --advvilav~p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   62 --ADVVILAVKPQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             --TSEEEE-S-GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             --CCEEEEEECHHHHHHHHHHHhhccCCCEEEEe
Confidence              79999999987776666554   445555544

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=95.45  E-value=0.076  Score=47.54  Aligned_cols=33  Identities=18%  Similarity=0.090  Sum_probs=29.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      .+++|+||++++|.+.++.+...|++|+++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~   34 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHR   34 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCC
Confidence            478999999999999999999999999988754

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK00811 spermidine synthase; Provisional

Probab=95.44  E-value=0.1  Score=47.39  Aligned_cols=97  Identities=10%  Similarity=0.059  Sum_probs=61.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcC-----C--CEEEecCCcccHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFG-----F--DDAFNYKEENDLD  226 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~--~~vv~~~~~~~~~  226 (356)
                      .+.++||++|  +|.|..+..+++..+. +|++++.+++-.          +.+++.+.     .  +.-+..... +..
T Consensus        75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv----------~~a~~~~~~~~~~~~~d~rv~v~~~-Da~  141 (283)
T PRK00811         75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVV----------EVCRKYLPEIAGGAYDDPRVELVIG-DGI  141 (283)
T ss_pred             CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHH----------HHHHHHhHHhccccccCCceEEEEC-chH
Confidence            3467999999  3557777788887654 899999888876          55552221     1  111111111 344


Q ss_pred             HHHHHhCCCCccEEEeCCC-----------chHHHHHHHhhccCCeEEEE
Q 018404          227 AALKRCFPEGIDIYFEHVG-----------GKMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  265 (356)
                      ..+.+ ..+.+|+||-...           .+.+..+.+.|+++|.++..
T Consensus       142 ~~l~~-~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        142 KFVAE-TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             HHHhh-CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            44444 3447999986431           12457888999999999864

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.44  E-value=0.063  Score=51.15  Aligned_cols=111  Identities=17%  Similarity=0.141  Sum_probs=65.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc-CCCE-EEecCCcccHHHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFDD-AFNYKEENDLDAALK  230 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~-vv~~~~~~~~~~~~~  230 (356)
                      +-..+.+|+|+||+|.+|..+++.+...|.+|++++++.++..   ..... ....... +... ..|..+.+.+...++
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~---~~~~~-~~~~~~~~~v~~v~~Dl~d~~~l~~~~~  131 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIR---GKNGK-EDTKKELPGAEVVFGDVTDADSLRKVLF  131 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhcc---ccchh-hHHhhhcCCceEEEeeCCCHHHHHHHHH
Confidence            4456779999999999999999998889999999998765420   00000 1111012 2322 234444323333344


Q ss_pred             HhCCCCccEEEeCCCch-------------HHHHHHHhhccC--CeEEEEccc
Q 018404          231 RCFPEGIDIYFEHVGGK-------------MLDAVLLNMRLH--GRIAACGMI  268 (356)
Q Consensus       231 ~~~~~~~d~vid~~g~~-------------~~~~~~~~l~~~--G~~v~~g~~  268 (356)
                      .. +.++|+||+|.+..             ....+++.+...  +++|.++..
T Consensus       132 ~~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        132 SE-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             Hh-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            32 11699999998741             112334444433  478887764

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.43  E-value=0.16  Score=45.96  Aligned_cols=38  Identities=16%  Similarity=0.115  Sum_probs=33.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~  194 (356)
                      ++.+++|+| +||.+.+++.-+...|+ +++++.|+.++.
T Consensus       126 ~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka  164 (283)
T PRK14027        126 KLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRA  164 (283)
T ss_pred             CCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHH
Confidence            467999999 79999999988888998 788898888876

>PLN02366 spermidine synthase

Probab=95.41  E-value=0.12  Score=47.39  Aligned_cols=99  Identities=14%  Similarity=0.107  Sum_probs=61.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCC------CEEEecCCcccHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGF------DDAFNYKEENDLDA  227 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~vv~~~~~~~~~~  227 (356)
                      .+.++||+.|+  |-|..+..+++.-+. +|.++...++-.          +.+++.+..      +.-+..... +..+
T Consensus        90 ~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi----------~~ar~~f~~~~~~~~dpRv~vi~~-Da~~  156 (308)
T PLN02366         90 PNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVI----------DVSKKFFPDLAVGFDDPRVNLHIG-DGVE  156 (308)
T ss_pred             CCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHH----------HHHHHhhhhhccccCCCceEEEEC-hHHH
Confidence            45689999994  336677788887654 788888877655          555522321      101111111 4444


Q ss_pred             HHHHhCCCCccEEEeCCCc-----------hHHHHHHHhhccCCeEEEEc
Q 018404          228 ALKRCFPEGIDIYFEHVGG-----------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .+++..++.+|+||--...           +.+..+.+.|+++|.++.-+
T Consensus       157 ~l~~~~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        157 FLKNAPEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             HHhhccCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            4554333479998763321           35788899999999997543

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.36  E-value=0.09  Score=46.67  Aligned_cols=35  Identities=20%  Similarity=0.098  Sum_probs=30.2

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      .+.++||+||+  |++|.+.+..+...|++|++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            35789999988  489999998888889999999876

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.33  E-value=0.11  Score=42.32  Aligned_cols=93  Identities=15%  Similarity=0.161  Sum_probs=65.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH-------HHH
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA-------ALK  230 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~-------~~~  230 (356)
                      .+|+|.||-|.+|.++++.-|..++-|..++-++++.                .....+++.++  +|.+       ++.
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~----------------Ad~sI~V~~~~--swtEQe~~v~~~vg   65 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ----------------ADSSILVDGNK--SWTEQEQSVLEQVG   65 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc----------------ccceEEecCCc--chhHHHHHHHHHHH
Confidence            4899999999999999999999999999888776653                12223444433  4443       344


Q ss_pred             HhCCC-CccEEEeCCCc-h-------H-------------------HHHHHHhhccCCeEEEEccc
Q 018404          231 RCFPE-GIDIYFEHVGG-K-------M-------------------LDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       231 ~~~~~-~~d~vid~~g~-~-------~-------------------~~~~~~~l~~~G~~v~~g~~  268 (356)
                      +...+ ++|.||...|+ .       .                   ...+-..|+++|-+-+.|..
T Consensus        66 ~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk  131 (236)
T KOG4022|consen   66 SSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK  131 (236)
T ss_pred             HhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc
Confidence            44556 99999987663 1       0                   12334478999998888763

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=95.33  E-value=0.14  Score=46.23  Aligned_cols=77  Identities=19%  Similarity=0.176  Sum_probs=45.5

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc----CCCEE----E-ecCCcccHHHHH
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF----GFDDA----F-NYKEENDLDAAL  229 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~v----v-~~~~~~~~~~~~  229 (356)
                      |||+||+|.+|...++-+...+. +++.+++++..+          -.+++++    +...+    . ...+- .-.+.+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l----------~~l~~~l~~~~~~~~v~~~~~~vigDv-rd~~~l   69 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKL----------YELERELRSRFPDPKVRFEIVPVIGDV-RDKERL   69 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHH----------HHHHHHCHHHC--TTCEEEEE--CTSC-CHHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHH----------HHHHHHHhhcccccCcccccCceeecc-cCHHHH
Confidence            79999999999988877777776 899999998887          4444344    21111    1 01121 234456


Q ss_pred             HHhCCC-CccEEEeCCCch
Q 018404          230 KRCFPE-GIDIYFEHVGGK  247 (356)
Q Consensus       230 ~~~~~~-~~d~vid~~g~~  247 (356)
                      .+.... ++|+||.+..-+
T Consensus        70 ~~~~~~~~pdiVfHaAA~K   88 (293)
T PF02719_consen   70 NRIFEEYKPDIVFHAAALK   88 (293)
T ss_dssp             HHHTT--T-SEEEE-----
T ss_pred             HHHHhhcCCCEEEEChhcC
Confidence            666655 899999988854

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK14967 putative methyltransferase; Provisional

Probab=95.33  E-value=0.49  Score=41.20  Aligned_cols=95  Identities=20%  Similarity=0.130  Sum_probs=61.5

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHh---hcCCC-EEEecCCcccHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKN---KFGFD-DAFNYKEENDLD  226 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~-~vv~~~~~~~~~  226 (356)
                      ..+.++++||-.| +|. |..++.+++. ++ +|++++.++...          +.+++   ..+.. .+++.    ++.
T Consensus        32 ~~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l----------~~a~~n~~~~~~~~~~~~~----d~~   94 (223)
T PRK14967         32 EGLGPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAV----------RSARLNALLAGVDVDVRRG----DWA   94 (223)
T ss_pred             cccCCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHH----------HHHHHHHHHhCCeeEEEEC----chh
Confidence            4578889999999 555 8888888875 55 999999988766          43331   33442 22221    333


Q ss_pred             HHHHHhCCCCccEEEeCCCc----------------------------hHHHHHHHhhccCCeEEEEc
Q 018404          227 AALKRCFPEGIDIYFEHVGG----------------------------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~----------------------------~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +.+   ..+.+|+|+.....                            ..+..+.+.|+++|+++.+-
T Consensus        95 ~~~---~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~  159 (223)
T PRK14967         95 RAV---EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ  159 (223)
T ss_pred             hhc---cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            222   12379999874210                            13456788999999998763

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.33  E-value=0.23  Score=42.46  Aligned_cols=100  Identities=13%  Similarity=0.026  Sum_probs=60.0

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR  231 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  231 (356)
                      ....++.+||-.|  .|.|..+..+++. |++|++++.+++-.      +.+.+.+. ..+... ++.... ++.+ . .
T Consensus        26 l~~~~~~~vLDiG--cG~G~~a~~La~~-g~~V~gvD~S~~~i------~~a~~~~~-~~~~~~-v~~~~~-d~~~-~-~   91 (197)
T PRK11207         26 VKVVKPGKTLDLG--CGNGRNSLYLAAN-GFDVTAWDKNPMSI------ANLERIKA-AENLDN-LHTAVV-DLNN-L-T   91 (197)
T ss_pred             cccCCCCcEEEEC--CCCCHHHHHHHHC-CCEEEEEeCCHHHH------HHHHHHHH-HcCCCc-ceEEec-Chhh-C-C
Confidence            3455678999998  3457788888875 88999999988765      11112222 333321 111111 2211 1 1


Q ss_pred             hCCCCccEEEeCCCc---------hHHHHHHHhhccCCeEEEEc
Q 018404          232 CFPEGIDIYFEHVGG---------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       232 ~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  266 (356)
                      . .+.+|+|+.+..-         ..+..+.+.|+|+|.++.+.
T Consensus        92 ~-~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         92 F-DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             c-CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            1 2369999875331         35678888999999965544

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.32  E-value=0.095  Score=47.31  Aligned_cols=39  Identities=15%  Similarity=0.236  Sum_probs=35.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKV  194 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~  194 (356)
                      .+|++++|.| +||.+.+++.-+...|+ +++++.|+.++.
T Consensus       124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra  163 (283)
T COG0169         124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERA  163 (283)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            3579999999 89999999999999996 899999999987

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.31  E-value=0.17  Score=45.19  Aligned_cols=100  Identities=16%  Similarity=0.196  Sum_probs=61.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      .++.+||=.|  +|.|..+..+++. |.+|++++.+++.+      +.+++.+. +.|...-+..... +.. .+.....
T Consensus        43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l------~~a~~~~~-~~g~~~~v~~~~~-d~~-~l~~~~~  110 (255)
T PRK11036         43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMI------QRAKQAAE-AKGVSDNMQFIHC-AAQ-DIAQHLE  110 (255)
T ss_pred             CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHH------HHHHHHHH-hcCCccceEEEEc-CHH-HHhhhcC
Confidence            4567888887  5667888888875 88999999998876      22222222 3343211111111 222 1222223


Q ss_pred             CCccEEEeCCC-----c--hHHHHHHHhhccCCeEEEEc
Q 018404          235 EGIDIYFEHVG-----G--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       235 ~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +.+|+|+....     .  ..+..+.+.|+|+|.++.+-
T Consensus       111 ~~fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        111 TPVDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             CCCCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            47999985322     2  36789999999999997653

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.25  E-value=0.38  Score=45.63  Aligned_cols=93  Identities=22%  Similarity=0.306  Sum_probs=63.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      -++.+|||+| +|-+|..++..+...|. +|++..|+.++.          +.+.+++|.. ++..+   +..+.+.   
T Consensus       176 L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA----------~~La~~~~~~-~~~l~---el~~~l~---  237 (414)
T COG0373         176 LKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERA----------EELAKKLGAE-AVALE---ELLEALA---  237 (414)
T ss_pred             cccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHH----------HHHHHHhCCe-eecHH---HHHHhhh---
Confidence            3578999999 89999999999999986 888888898887          5555489853 33222   3333444   


Q ss_pred             CCCccEEEeCCCchHH----HHHHHhhccCCe--EEEEcc
Q 018404          234 PEGIDIYFEHVGGKML----DAVLLNMRLHGR--IAACGM  267 (356)
Q Consensus       234 ~~~~d~vid~~g~~~~----~~~~~~l~~~G~--~v~~g~  267 (356)
                        .+|+||.++|.+..    ....+.++..-+  ++.++.
T Consensus       238 --~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiav  275 (414)
T COG0373         238 --EADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAV  275 (414)
T ss_pred             --hCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence              38999999998422    344445444333  456654

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.25  E-value=0.18  Score=40.17  Aligned_cols=105  Identities=14%  Similarity=0.130  Sum_probs=60.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcc------hhcc-------ccchhHHHHHHHhhcCC-CEEEecCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSRE------KVWL-------IPMQSQLVELLKNKFGF-DDAFNYKE  221 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~------~~~~-------~~~~~~~~~~~~~~~g~-~~vv~~~~  221 (356)
                      ..+|+|.| .|++|..++..+...|. +++.++...=      +.-+       -+-.+++++.++ ++.. ..+..+..
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~-~~np~~~v~~~~~   79 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQ-EINPDVEVEAIPE   79 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHH-HHSTTSEEEEEES
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHH-HhcCceeeeeeec
Confidence            46899999 89999999999988899 7887775311      1001       122456677777 5543 23322222


Q ss_pred             cccH-HHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCe-EEEEc
Q 018404          222 ENDL-DAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGR-IAACG  266 (356)
Q Consensus       222 ~~~~-~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~-~v~~g  266 (356)
                        .+ .+.+.++. +++|+||+|..+ .......+.+...+. ++..+
T Consensus        80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~  124 (135)
T PF00899_consen   80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG  124 (135)
T ss_dssp             --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred             --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence              22 12222222 258999999998 443344445555554 44443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=95.25  E-value=0.082  Score=48.77  Aligned_cols=39  Identities=15%  Similarity=0.271  Sum_probs=33.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      .+.+|||+||+|.+|..++..+...|++|++++++.+..
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~   42 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR   42 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence            467999999999999999998888999999888776543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=95.24  E-value=0.094  Score=45.89  Aligned_cols=90  Identities=18%  Similarity=0.232  Sum_probs=59.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCCCcc
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      |+|.||+|.+|...++.+...+.+|.+.+|+..+.        ..+.++ ..|+..+ .|+.+    .+.+.+... |+|
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~--------~~~~l~-~~g~~vv~~d~~~----~~~l~~al~-g~d   66 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSD--------RAQQLQ-ALGAEVVEADYDD----PESLVAALK-GVD   66 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHH--------HHHHHH-HTTTEEEES-TT-----HHHHHHHHT-TCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchh--------hhhhhh-cccceEeecccCC----HHHHHHHHc-CCc
Confidence            78999999999999999999999999999987542        115566 6787533 23332    233333332 699


Q ss_pred             EEEeCCC---ch---HHHHHHHhhccCC--eEE
Q 018404          239 IYFEHVG---GK---MLDAVLLNMRLHG--RIA  263 (356)
Q Consensus       239 ~vid~~g---~~---~~~~~~~~l~~~G--~~v  263 (356)
                      .||.+.+   ..   ......+..+.-|  +++
T Consensus        67 ~v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v   99 (233)
T PF05368_consen   67 AVFSVTPPSHPSELEQQKNLIDAAKAAGVKHFV   99 (233)
T ss_dssp             EEEEESSCSCCCHHHHHHHHHHHHHHHT-SEEE
T ss_pred             eEEeecCcchhhhhhhhhhHHHhhhccccceEE
Confidence            9999988   32   3334445444444  555

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.23  E-value=0.17  Score=45.34  Aligned_cols=103  Identities=13%  Similarity=0.168  Sum_probs=65.5

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ...++.++.+||=.| +| .|..+..+++..+++|++++.+++..          +.+++.+.....+..... ++.+  
T Consensus        46 ~~l~l~~~~~VLDiG-cG-~G~~a~~la~~~~~~v~giD~s~~~~----------~~a~~~~~~~~~i~~~~~-D~~~--  110 (263)
T PTZ00098         46 SDIELNENSKVLDIG-SG-LGGGCKYINEKYGAHVHGVDICEKMV----------NIAKLRNSDKNKIEFEAN-DILK--  110 (263)
T ss_pred             HhCCCCCCCEEEEEc-CC-CChhhHHHHhhcCCEEEEEECCHHHH----------HHHHHHcCcCCceEEEEC-Cccc--
Confidence            446788999999888 33 46667778887789999999998876          666633322111111111 2110  


Q ss_pred             HHhCCCCccEEEeC-----CC--c--hHHHHHHHhhccCCeEEEEcc
Q 018404          230 KRCFPEGIDIYFEH-----VG--G--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       230 ~~~~~~~~d~vid~-----~g--~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ..+..+.+|+|+..     ..  .  ..++.+.+.|+|+|+++....
T Consensus       111 ~~~~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        111 KDFPENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             CCCCCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            01112369999862     12  1  367888999999999987654

>PLN02244 tocopherol O-methyltransferase

Probab=95.21  E-value=0.14  Score=47.71  Aligned_cols=101  Identities=17%  Similarity=0.150  Sum_probs=63.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      +++++||=+|  .|.|..+..+++..|++|++++.++...      +.+.+.++ +.+...-+..... +..+ + .+..
T Consensus       117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i------~~a~~~~~-~~g~~~~v~~~~~-D~~~-~-~~~~  184 (340)
T PLN02244        117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQA------ARANALAA-AQGLSDKVSFQVA-DALN-Q-PFED  184 (340)
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHH------HHHHHHHH-hcCCCCceEEEEc-Cccc-C-CCCC
Confidence            6788998887  4567788889988899999999998766      11222222 3343211111111 1110 0 1122


Q ss_pred             CCccEEEeCCC-----c--hHHHHHHHhhccCCeEEEEcc
Q 018404          235 EGIDIYFEHVG-----G--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      +.||+|+....     .  ..+.++.+.|+|+|+++....
T Consensus       185 ~~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        185 GQFDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             CCccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            37999986433     1  367889999999999987653

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.19  E-value=0.11  Score=45.08  Aligned_cols=74  Identities=16%  Similarity=0.227  Sum_probs=51.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCCCCcc
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      |||+||+|-+|..++..+...|..|+++.++....          .....+.... ...|..+...+.+.+...   .+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~----------~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d   67 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSE----------SFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NID   67 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGG----------HHHHHHTTEEEEESETTSHHHHHHHHHHH---TES
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccc----------ccccccceEEEEEeecccccccccccccc---Cce
Confidence            79999999999999999999999999988887764          3333122322 223444432333333332   689


Q ss_pred             EEEeCCCc
Q 018404          239 IYFEHVGG  246 (356)
Q Consensus       239 ~vid~~g~  246 (356)
                      .||.+.+.
T Consensus        68 ~vi~~a~~   75 (236)
T PF01370_consen   68 VVIHLAAF   75 (236)
T ss_dssp             EEEEEBSS
T ss_pred             EEEEeecc
Confidence            99998885

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.17  E-value=0.43  Score=44.07  Aligned_cols=87  Identities=24%  Similarity=0.201  Sum_probs=64.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.++-|+| .|.+|.+.++.++..|++|+...+++. .          +..+ ..+..++       ++.+.+.+    
T Consensus       145 ~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~-~----------~~~~-~~~~~y~-------~l~ell~~----  200 (324)
T COG1052         145 RGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN-P----------EAEK-ELGARYV-------DLDELLAE----  200 (324)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC-h----------HHHh-hcCceec-------cHHHHHHh----
Confidence            478999999 999999999999999999999998875 2          3333 4444332       34444544    


Q ss_pred             CccEEEeCCCc-h-HH----HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K-ML----DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~-~~----~~~~~~l~~~G~~v~~g~  267 (356)
                       .|++.-+... + +.    ...+..|++++.+|.++.
T Consensus       201 -sDii~l~~Plt~~T~hLin~~~l~~mk~ga~lVNtaR  237 (324)
T COG1052         201 -SDIISLHCPLTPETRHLINAEELAKMKPGAILVNTAR  237 (324)
T ss_pred             -CCEEEEeCCCChHHhhhcCHHHHHhCCCCeEEEECCC
Confidence             6777665553 3 22    577889999999999886

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=95.15  E-value=0.087  Score=46.18  Aligned_cols=35  Identities=17%  Similarity=0.147  Sum_probs=31.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      .+++|+||+|++|..+++.+...|++|+.++++.+
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~   37 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN   37 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH
Confidence            47999999999999999988888999999998743

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.14  E-value=0.28  Score=44.87  Aligned_cols=34  Identities=9%  Similarity=0.151  Sum_probs=30.4

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeC
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAG  189 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~  189 (356)
                      .|++++|+|++  +|+|.+.+..+...|++|++..+
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~   42 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW   42 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence            57899999985  89999999999999999998653

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=95.14  E-value=0.089  Score=47.24  Aligned_cols=151  Identities=16%  Similarity=0.115  Sum_probs=94.7

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCc---------
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEE---------  222 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~---------  222 (356)
                      .-.++.++++.| .|..|+.++-.++..|+-|....-...+.          +..+ .+|+..+ ++ +++         
T Consensus       160 gtv~pA~vlv~G-~Gvagl~aiata~~lG~iVt~rdlrm~~K----------eqv~-s~Ga~f~~~~-~ee~~gGYAk~m  226 (356)
T COG3288         160 GTVSPAKVLVIG-AGVAGLAAIATAVRLGAIVTARDLRMFKK----------EQVE-SLGAKFLAVE-DEESAGGYAKEM  226 (356)
T ss_pred             ccccchhhhhhh-HHHHHHHHHHHHhhcceEEehhhhhhHHh----------hhhh-hccccccccc-ccccCCCccccC
Confidence            344567889999 89999999999999999999888887776          6666 6776321 11 110         


Q ss_pred             -ccHHHHHHHhCC---CCccEEEeCCCc---h----HHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcce
Q 018404          223 -NDLDAALKRCFP---EGIDIYFEHVGG---K----MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIR  291 (356)
Q Consensus       223 -~~~~~~~~~~~~---~~~d~vid~~g~---~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  291 (356)
                       ++|...-.++..   .++|+||-+.=-   +    ....+...++||..+|.+..-.+.|-+...   +..-...++++
T Consensus       227 s~~~~~~q~~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~---pg~~v~~~gV~  303 (356)
T COG3288         227 SEEFIAKQAELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTE---PGKVVTKNGVK  303 (356)
T ss_pred             CHHHHHHHHHHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCccccc---CCeEEEeCCeE
Confidence             133333222222   279999986532   1    347889999999999998875554433221   11223345666


Q ss_pred             eeceeee--cc----hhhHHHHHHHHHHHHHcCC
Q 018404          292 MEGFVVF--DY----FPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       292 ~~~~~~~--~~----~~~~~~~l~~~~~~~~~g~  319 (356)
                      +.|....  +.    .+.|...+-.+++++-+.+
T Consensus       304 iig~~nlp~r~a~~aS~LYa~Nl~~~l~ll~~~~  337 (356)
T COG3288         304 IIGYTNLPGRLAAQASQLYATNLVNLLKLLCKKK  337 (356)
T ss_pred             EEeecCcchhhhhhHHHHHHHHHHHHHHHHhccC
Confidence            6664321  11    3455666777777666543

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.13  E-value=0.065  Score=48.59  Aligned_cols=75  Identities=9%  Similarity=-0.070  Sum_probs=49.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~  233 (356)
                      ++.+|+|+| +|+.+.+++.-+..+|+ +|+++.|+.++.          +.+.++++.. .+....   .. +.+.+..
T Consensus       124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka----------~~La~~~~~~~~~~~~~---~~-~~~~~~~  188 (282)
T TIGR01809       124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKL----------SRLVDLGVQVGVITRLE---GD-SGGLAIE  188 (282)
T ss_pred             CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHH----------HHHHHHhhhcCcceecc---ch-hhhhhcc
Confidence            578999999 89999999999999998 799999998886          5554344321 111111   00 1111111


Q ss_pred             CCCccEEEeCCCc
Q 018404          234 PEGIDIYFEHVGG  246 (356)
Q Consensus       234 ~~~~d~vid~~g~  246 (356)
                       ..+|+||+|+..
T Consensus       189 -~~~DiVInaTp~  200 (282)
T TIGR01809       189 -KAAEVLVSTVPA  200 (282)
T ss_pred             -cCCCEEEECCCC
Confidence             258999999885

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=95.11  E-value=0.1  Score=46.30  Aligned_cols=36  Identities=28%  Similarity=0.243  Sum_probs=29.7

Q ss_pred             EEEEecCCchHHHHHHHHHHH----cCCEEEEEeCCcchh
Q 018404          159 YIYVSAASGAVGQLVGQFAKL----MGCYVVGSAGSREKV  194 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~----~g~~Vi~~~~~~~~~  194 (356)
                      .++|+||++++|.+++..+..    .|++|+.+.++.++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~   41 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEAL   41 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHH
Confidence            589999999999887764443    699999999987765

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.10  E-value=0.33  Score=39.00  Aligned_cols=93  Identities=11%  Similarity=0.072  Sum_probs=63.3

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +|+........+....---.|.+|+|+|.+..+|.-++.++...|+.|+...+....+          +           
T Consensus         8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l----------~-----------   66 (140)
T cd05212           8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQL----------Q-----------   66 (140)
T ss_pred             cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCH----------H-----------
Confidence            4444444444554433234689999999999999999999999999998876432221          1           


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCch-HHHHHHHhhccCCeEEEEcc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~  267 (356)
                                +.++     ..|+|+-++|.. .+.  -+.+++|-.++.+|.
T Consensus        67 ----------~~v~-----~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~  101 (140)
T cd05212          67 ----------SKVH-----DADVVVVGSPKPEKVP--TEWIKPGATVINCSP  101 (140)
T ss_pred             ----------HHHh-----hCCEEEEecCCCCccC--HHHcCCCCEEEEcCC
Confidence                      1122     268888888874 333  456889988888875

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.09  E-value=0.18  Score=43.56  Aligned_cols=102  Identities=16%  Similarity=0.145  Sum_probs=60.9

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ...+++++++||-.|.  |.|..+..+++.. .+|++++.+++..      +.+.+.++ +.+... ++.... +..+.+
T Consensus        72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~------~~a~~~~~-~~~~~~-v~~~~~-d~~~~~  139 (212)
T PRK00312         72 ELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQ------WEAKRRLK-QLGLHN-VSVRHG-DGWKGW  139 (212)
T ss_pred             HhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHH------HHHHHHHH-HCCCCc-eEEEEC-CcccCC
Confidence            4567889999999983  3455666666654 5899999887765      22223333 445432 111111 111111


Q ss_pred             HHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          230 KRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      .  ..+.+|+|+..... .......+.|+++|+++..
T Consensus       140 ~--~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~  174 (212)
T PRK00312        140 P--AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAP  174 (212)
T ss_pred             C--cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence            1  11369998865544 4556778999999998754

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.09  E-value=0.24  Score=44.97  Aligned_cols=94  Identities=17%  Similarity=0.211  Sum_probs=64.3

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +||+..-.+..|.+..---.|.+|.|.|.++.+|.-.+.++...|+.|++..+.....          +.+         
T Consensus       139 ~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l----------~e~---------  199 (301)
T PRK14194        139 TPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDA----------KAL---------  199 (301)
T ss_pred             CCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCH----------HHH---------
Confidence            4665555555565443334689999999778999999999999999999885442222          111         


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                                  .+     ..|+||-++|. ..+...+  ++++..+|.+|..
T Consensus       200 ------------~~-----~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin  233 (301)
T PRK14194        200 ------------CR-----QADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN  233 (301)
T ss_pred             ------------Hh-----cCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence                        11     26788888887 4444443  8888888888853

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.09  E-value=0.13  Score=47.48  Aligned_cols=39  Identities=21%  Similarity=0.282  Sum_probs=34.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      .|.+|+|+||+|.+|..++..+...|.+|+++.++.+..
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDR   42 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcch
Confidence            467999999999999999998888899999998876653

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=95.09  E-value=0.13  Score=47.58  Aligned_cols=39  Identities=10%  Similarity=0.014  Sum_probs=31.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~  194 (356)
                      +|.+|||+||+|.+|...++.+...|  .+|++.+++..+.
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~   43 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ   43 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH
Confidence            36789999999999999988777665  6898888765543

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=95.08  E-value=0.27  Score=47.41  Aligned_cols=105  Identities=20%  Similarity=0.199  Sum_probs=63.6

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ....++|++||=.|  .|.|..+..+++.++ .+|++++.+++++      +.+.+.++ ++|....+...+. +.. ..
T Consensus       233 ~L~~~~g~~VLDlc--ag~G~kt~~la~~~~~~~v~a~D~~~~~l------~~~~~n~~-r~g~~~~v~~~~~-d~~-~~  301 (426)
T TIGR00563       233 WLAPQNEETILDAC--AAPGGKTTHILELAPQAQVVALDIHEHRL------KRVYENLK-RLGLTIKAETKDG-DGR-GP  301 (426)
T ss_pred             HhCCCCCCeEEEeC--CCccHHHHHHHHHcCCCeEEEEeCCHHHH------HHHHHHHH-HcCCCeEEEEecc-ccc-cc
Confidence            45678899887776  345656666677664 7999999998887      33344455 5676421111111 110 01


Q ss_pred             HHh-CCCCccEEEe---CCCc--------------------------hHHHHHHHhhccCCeEEEEc
Q 018404          230 KRC-FPEGIDIYFE---HVGG--------------------------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       230 ~~~-~~~~~d~vid---~~g~--------------------------~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ... ..+.+|.||-   |+|.                          ..+..+++.|+|||+++..-
T Consensus       302 ~~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvyst  368 (426)
T TIGR00563       302 SQWAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYAT  368 (426)
T ss_pred             cccccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            111 1136999874   5552                          25567889999999998653

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.07  E-value=0.71  Score=38.92  Aligned_cols=101  Identities=14%  Similarity=0.181  Sum_probs=62.3

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA  228 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  228 (356)
                      ....+.++++||=.|  .|.|..++.+++.. +.+|++++.+++..      +.+.+.++ .++...+ ..... +....
T Consensus        25 ~~l~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~s~~~~------~~a~~n~~-~~~~~~i-~~~~~-d~~~~   93 (187)
T PRK08287         25 SKLELHRAKHLIDVG--AGTGSVSIEAALQFPSLQVTAIERNPDAL------RLIKENRQ-RFGCGNI-DIIPG-EAPIE   93 (187)
T ss_pred             HhcCCCCCCEEEEEC--CcCCHHHHHHHHHCCCCEEEEEECCHHHH------HHHHHHHH-HhCCCCe-EEEec-Cchhh
Confidence            445677888988887  34477777888776 56999999998766      12222333 3444221 11111 21111


Q ss_pred             HHHhCCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEE
Q 018404          229 LKRCFPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  265 (356)
                          ..+.+|+|+.....    ..+..+.+.|+++|+++..
T Consensus        94 ----~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         94 ----LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             ----cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence                12368999864321    3667889999999998764

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.06  E-value=0.3  Score=40.12  Aligned_cols=88  Identities=8%  Similarity=0.104  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|+|.| .|.+|..-++.+...|++|++++  ++..          +.+. +++... +..+   .+.+.    .-.
T Consensus        12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIs--p~~~----------~~l~-~l~~i~-~~~~---~~~~~----dl~   69 (157)
T PRK06719         12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVS--PEIC----------KEMK-ELPYIT-WKQK---TFSND----DIK   69 (157)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEc--CccC----------HHHH-hccCcE-EEec---ccChh----cCC
Confidence            478999999 79999998888888999999884  4444          5555 444211 1111   11111    012


Q ss_pred             CccEEEeCCCchHHHHHHHhhccCCeEEEE
Q 018404          236 GIDIYFEHVGGKMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       236 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~  265 (356)
                      ++|+||-+++.+..+.....+++.+.++..
T Consensus        70 ~a~lViaaT~d~e~N~~i~~~a~~~~~vn~   99 (157)
T PRK06719         70 DAHLIYAATNQHAVNMMVKQAAHDFQWVNV   99 (157)
T ss_pred             CceEEEECCCCHHHHHHHHHHHHHCCcEEE
Confidence            689999999998777776666655545543

>PRK08317 hypothetical protein; Provisional

Probab=95.01  E-value=0.18  Score=44.06  Aligned_cols=102  Identities=21%  Similarity=0.262  Sum_probs=65.9

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhc--CCCEEEecCCcccH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKF--GFDDAFNYKEENDL  225 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~vv~~~~~~~~  225 (356)
                      ....+.++++||-.| +|. |..+..+++..  ++++++++.+++.+          +.++ +.  .....+..... +.
T Consensus        13 ~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~----------~~a~-~~~~~~~~~~~~~~~-d~   78 (241)
T PRK08317         13 ELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAML----------ALAK-ERAAGLGPNVEFVRG-DA   78 (241)
T ss_pred             HHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHH----------HHHH-HHhhCCCCceEEEec-cc
Confidence            456788999999999 444 88999999887  36999999998877          6665 32  11111111111 11


Q ss_pred             HHHHHHhCCCCccEEEeCC-----Cc--hHHHHHHHhhccCCeEEEEcc
Q 018404          226 DAALKRCFPEGIDIYFEHV-----GG--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       226 ~~~~~~~~~~~~d~vid~~-----g~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+ . ....+.+|.|+...     ..  ..+..+.++|+++|.++....
T Consensus        79 ~~-~-~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         79 DG-L-PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             cc-C-CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence            10 0 11223788887532     22  477899999999999987653

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.00  E-value=0.34  Score=41.95  Aligned_cols=98  Identities=16%  Similarity=0.135  Sum_probs=62.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--------------EecC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--------------FNYK  220 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--------------v~~~  220 (356)
                      .++.+||+.|  -|.|.-++-||+ +|.+|++++.++.-.          +.+.++.+....              ++..
T Consensus        33 ~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai----------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   99 (213)
T TIGR03840        33 PAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAV----------EQFFAENGLTPTVTQQGEFTRYRAGNIEIF   99 (213)
T ss_pred             CCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHH----------HHHHHHcCCCcceeccccceeeecCceEEE
Confidence            5677999998  466888888875 699999999998877          554323433210              0000


Q ss_pred             CcccHHHHHHHhCCCCccEEEeCCC---------chHHHHHHHhhccCCeEEEEcc
Q 018404          221 EENDLDAALKRCFPEGIDIYFEHVG---------GKMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       221 ~~~~~~~~~~~~~~~~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .. ++.+ +.....+.+|.|+|+.-         ...+..+.++|+|+|+++.++.
T Consensus       100 ~~-D~~~-~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       100 CG-DFFA-LTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             Ec-cCCC-CCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            00 1100 00000136899999754         1357889999999998776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.98  E-value=0.26  Score=44.60  Aligned_cols=78  Identities=15%  Similarity=0.098  Sum_probs=53.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      --.|.+|+|.|.++-+|...+.++...|++|++.-+. .            ..+.                  +.+    
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~-t------------~~L~------------------~~~----  200 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR-T------------QNLP------------------ELV----  200 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC-c------------hhHH------------------HHh----
Confidence            3568899999955559999999999999977766542 1            2122                  011    


Q ss_pred             CCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          234 PEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       234 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                       ..+|+||.++|.+.+ --.+.++++-.++.+|..
T Consensus       201 -~~aDIvI~AtG~~~~-v~~~~lk~gavViDvg~n  233 (283)
T PRK14192        201 -KQADIIVGAVGKPEL-IKKDWIKQGAVVVDAGFH  233 (283)
T ss_pred             -ccCCEEEEccCCCCc-CCHHHcCCCCEEEEEEEe
Confidence             137899999886332 223568888888888863

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=94.97  E-value=0.56  Score=42.05  Aligned_cols=110  Identities=10%  Similarity=0.078  Sum_probs=63.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcch-----hcccc--------chhHHHHHHHhhcCCC-EEEecCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREK-----VWLIP--------MQSQLVELLKNKFGFD-DAFNYKE  221 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~-----~~~~~--------~~~~~~~~~~~~~g~~-~vv~~~~  221 (356)
                      +.+|+|.| .|++|..++..+...|. +++.++...-.     +++.-        -.+.+++.++ +.... .+..+.+
T Consensus        30 ~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~-~INP~~~V~~i~~  107 (268)
T PRK15116         30 DAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIR-QINPECRVTVVDD  107 (268)
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHH-hHCCCcEEEEEec
Confidence            56899999 89999999999999996 77777743111     11211        1235666666 55543 2222211


Q ss_pred             cccH-HHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhc-cCCeEEEEccccc
Q 018404          222 ENDL-DAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMR-LHGRIAACGMISQ  270 (356)
Q Consensus       222 ~~~~-~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~  270 (356)
                        .+ .+.+.++....+|+||||.+. ..-....+.+. .+=.++.+|..++
T Consensus       108 --~i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag~  157 (268)
T PRK15116        108 --FITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGG  157 (268)
T ss_pred             --ccChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCccc
Confidence              11 123333333469999999998 43333333333 3446666766544

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.97  E-value=0.25  Score=44.61  Aligned_cols=95  Identities=19%  Similarity=0.146  Sum_probs=64.3

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +||+..-.+..|.+..---.|.+|+|.|.+.-+|.-.+.++...|+.|+..-+...                        
T Consensus       138 ~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~------------------------  193 (285)
T PRK14189        138 RPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR------------------------  193 (285)
T ss_pred             cCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC------------------------
Confidence            45554444445544322346899999998888899999999999999987532211                        


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                             ++.+.++     ..|+|+-++|...+-. -+.++++..++.+|..
T Consensus       194 -------~l~~~~~-----~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin  232 (285)
T PRK14189        194 -------DLAAHTR-----QADIVVAAVGKRNVLT-ADMVKPGATVIDVGMN  232 (285)
T ss_pred             -------CHHHHhh-----hCCEEEEcCCCcCccC-HHHcCCCCEEEEcccc
Confidence                   1222222     2788999998743322 2889999999999864

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=94.96  E-value=0.58  Score=42.41  Aligned_cols=55  Identities=25%  Similarity=0.303  Sum_probs=41.9

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG---SREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      +.+++|. .+|=+-+|..|.+.+.+|+.+|++++.+..   +.++.          +.++ .+|+.-++.
T Consensus        57 G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~----------~~l~-a~GAevi~t  114 (300)
T COG0031          57 GLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERR----------KLLR-ALGAEVILT  114 (300)
T ss_pred             CCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHH----------HHHH-HcCCEEEEc
Confidence            6689998 556666999999999999999998888775   44454          6666 777765443

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.95  E-value=0.16  Score=41.78  Aligned_cols=83  Identities=20%  Similarity=0.226  Sum_probs=60.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCC---cccHHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE---ENDLDAALK  230 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~---~~~~~~~~~  230 (356)
                      ..+|-.-+|.||++++|.++..-+...|+.|+..+-..++-.         +.++ ++|-..++...+   +.+....+.
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~---------~vak-elg~~~vf~padvtsekdv~aala   75 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGA---------DVAK-ELGGKVVFTPADVTSEKDVRAALA   75 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccch---------HHHH-HhCCceEEeccccCcHHHHHHHHH
Confidence            345677899999999999999999999999999997766640         4555 888766664433   114554554


Q ss_pred             HhCCC--CccEEEeCCCc
Q 018404          231 RCFPE--GIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~~--~~d~vid~~g~  246 (356)
                      ....+  ..|+.++|.|.
T Consensus        76 ~ak~kfgrld~~vncagi   93 (260)
T KOG1199|consen   76 KAKAKFGRLDALVNCAGI   93 (260)
T ss_pred             HHHhhccceeeeeeccce
Confidence            43333  68999999994

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.94  E-value=0.1  Score=42.93  Aligned_cols=39  Identities=18%  Similarity=0.275  Sum_probs=36.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      .|..|++.|+.-|+|...++-+...|++||+++++++.+
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L   44 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANL   44 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHH
Confidence            578999999999999999999999999999999998887

>PRK07041 short chain dehydrogenase; Provisional

Probab=94.93  E-value=0.094  Score=45.60  Aligned_cols=74  Identities=16%  Similarity=0.217  Sum_probs=48.8

Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc--CCC-EE--EecCCcccHHHHHHHhCCC
Q 018404          161 YVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF--GFD-DA--FNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       161 lI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~-~v--v~~~~~~~~~~~~~~~~~~  235 (356)
                      +|+||+|++|.+.++.+...|++|++++++.++.          +.+.+..  +.. .+  .|..+...+.+.+.+.  +
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~   68 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRL----------AAAARALGGGAPVRTAALDITDEAAVDAFFAEA--G   68 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--C
Confidence            5899999999999998888999999999886664          3322122  221 22  3444432333333332  3


Q ss_pred             CccEEEeCCCc
Q 018404          236 GIDIYFEHVGG  246 (356)
Q Consensus       236 ~~d~vid~~g~  246 (356)
                      ++|++|.+.|.
T Consensus        69 ~id~li~~ag~   79 (230)
T PRK07041         69 PFDHVVITAAD   79 (230)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=94.92  E-value=0.23  Score=45.58  Aligned_cols=89  Identities=16%  Similarity=0.262  Sum_probs=58.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .+|.|+| .|.+|.+.+..++..|.  +|++.++++++.          +.++ +.|....+.  .  +..+.+     .
T Consensus         7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~----------~~a~-~~g~~~~~~--~--~~~~~~-----~   65 (307)
T PRK07502          7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETR----------ARAR-ELGLGDRVT--T--SAAEAV-----K   65 (307)
T ss_pred             cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHH----------HHHH-hCCCCceec--C--CHHHHh-----c
Confidence            5799999 99999999998888885  899999988877          6676 666521111  1  222222     1


Q ss_pred             CccEEEeCCCchHHH----HHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGGKMLD----AVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~~~~~----~~~~~l~~~G~~v~~g~  267 (356)
                      ..|+||.|+......    .....++++..++.+|.
T Consensus        66 ~aDvViiavp~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         66 GADLVILCVPVGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            478888888764332    22334556666666654

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.92  E-value=0.12  Score=45.00  Aligned_cols=38  Identities=13%  Similarity=0.180  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      ++.+++|+||+|++|...+..+...|++|+++.++...
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~   41 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKP   41 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccc
Confidence            36789999999999999999888889999999876543

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=94.89  E-value=0.5  Score=41.43  Aligned_cols=111  Identities=11%  Similarity=0.009  Sum_probs=63.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcch-----hccc--------cchhHHHHHHHhhcCCCEEEecCCc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREK-----VWLI--------PMQSQLVELLKNKFGFDDAFNYKEE  222 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~-----~~~~--------~~~~~~~~~~~~~~g~~~vv~~~~~  222 (356)
                      +.+|+|.| .|++|..++..+.+.|. +++.++...-.     +++.        +-.+.+++.++ ++....-+...+.
T Consensus        11 ~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~-~inP~~~V~~~~~   88 (231)
T cd00755          11 NAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIR-DINPECEVDAVEE   88 (231)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHH-HHCCCcEEEEeee
Confidence            35899999 99999999999988998 77776643210     0111        23355566666 5554322222221


Q ss_pred             ccHH-HHHHHhCCCCccEEEeCCCch-HHHHHHHhh-ccCCeEEEEccccc
Q 018404          223 NDLD-AALKRCFPEGIDIYFEHVGGK-MLDAVLLNM-RLHGRIAACGMISQ  270 (356)
Q Consensus       223 ~~~~-~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l-~~~G~~v~~g~~~~  270 (356)
                       .+. +.+.++....+|+|+||..+. .-....+.. ..+=.++..+..++
T Consensus        89 -~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~g~g~  138 (231)
T cd00755          89 -FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSMGAGG  138 (231)
T ss_pred             -ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEeCCcC
Confidence             121 233444434699999999983 322333333 33445665554443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06924 short chain dehydrogenase; Provisional

Probab=94.87  E-value=0.15  Score=45.05  Aligned_cols=34  Identities=15%  Similarity=0.316  Sum_probs=31.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      .+++|+||+|++|.+.++-+...|++|+++++++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~   35 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE   35 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence            4799999999999999988888899999999876

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=94.84  E-value=0.37  Score=40.78  Aligned_cols=114  Identities=14%  Similarity=0.041  Sum_probs=71.8

Q ss_pred             cCcchHHHHHHHHHHcC---------CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHH
Q 018404          137 LGMPGMTAWAGFYEICA---------PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELL  207 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~---------~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~  207 (356)
                      +||+....+..|....-         --.|.+|+|.|-+.-+|.=++.|+...||.|+....+--..            .
T Consensus        33 ~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~------------~  100 (197)
T cd01079          33 LPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV------------F  100 (197)
T ss_pred             cCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc------------c
Confidence            56665556656654321         25689999999999999999999999999999765332211            0


Q ss_pred             HhhcCCCEEEec-CC--cccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          208 KNKFGFDDAFNY-KE--ENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       208 ~~~~g~~~vv~~-~~--~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                      . .-+.   ... ..  . +....+.+.+. .+|+|+-++|...+.---+.++++-.+|.+|..
T Consensus       101 ~-~~~~---~~hs~t~~~-~~~~~l~~~~~-~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~  158 (197)
T cd01079         101 T-RGES---IRHEKHHVT-DEEAMTLDCLS-QSDVVITGVPSPNYKVPTELLKDGAICINFASI  158 (197)
T ss_pred             c-cccc---ccccccccc-chhhHHHHHhh-hCCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence            0 0000   000 00  1 21112333322 389999999986553346788999999999963

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=94.84  E-value=0.29  Score=44.59  Aligned_cols=64  Identities=23%  Similarity=0.303  Sum_probs=50.1

Q ss_pred             HHHHHHHHH---cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CcchhccccchhHHHHHHHhhcCCCEE
Q 018404          143 TAWAGFYEI---CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG---SREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       143 tA~~~l~~~---~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      .||.++.+.   +.+.||.++||-.-+|..|...+..++..|+++|++-.   +.++.          ..++ .+|+..+
T Consensus        86 ia~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~----------~~l~-a~Gaeii  154 (362)
T KOG1252|consen   86 IAWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKR----------ILLR-ALGAEII  154 (362)
T ss_pred             HHHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHH----------HHHH-HcCCEEE
Confidence            345554333   67899999999999999999999999999999998875   45565          6777 8887644


Q ss_pred             E
Q 018404          217 F  217 (356)
Q Consensus       217 v  217 (356)
                      .
T Consensus       155 ~  155 (362)
T KOG1252|consen  155 L  155 (362)
T ss_pred             e
Confidence            4

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.80  E-value=0.24  Score=44.65  Aligned_cols=69  Identities=14%  Similarity=0.101  Sum_probs=49.0

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHh
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  232 (356)
                      ...+.+++|+| +||.+.+++.-+..+|+ +|+++.|+.++.          +.+.+.++..          +.+.+.  
T Consensus       119 ~~~~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a----------~~la~~~~~~----------~~~~~~--  175 (272)
T PRK12550        119 VPPDLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTG----------KALAELYGYE----------WRPDLG--  175 (272)
T ss_pred             CCCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHH----------HHHHHHhCCc----------chhhcc--
Confidence            44567999999 89999999999999998 699999998886          5555344321          111111  


Q ss_pred             CCCCccEEEeCCCc
Q 018404          233 FPEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~~~~d~vid~~g~  246 (356)
                       ...+|+|++|+.-
T Consensus       176 -~~~~dlvINaTp~  188 (272)
T PRK12550        176 -GIEADILVNVTPI  188 (272)
T ss_pred             -cccCCEEEECCcc
Confidence             1258999998763

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=94.78  E-value=0.099  Score=48.64  Aligned_cols=37  Identities=16%  Similarity=0.218  Sum_probs=32.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      ++.+|||+||+|.+|..+++.+...|.+|+++++..+
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~   41 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS   41 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence            3578999999999999999999999999999987643

>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase

Probab=94.77  E-value=0.48  Score=45.37  Aligned_cols=100  Identities=15%  Similarity=0.127  Sum_probs=65.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc--ccHH-------
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE--NDLD-------  226 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~-------  226 (356)
                      .+|.|+|++|.+|..++.+.+..  ..+|++.+-..+-       +.+.+.++ +|....+.-.++.  ..+.       
T Consensus        58 KkI~ILGSTGSIGtqtLdVI~~~pd~f~vvaLaag~Ni-------~lL~~q~~-~f~p~~v~v~d~~~~~~l~~~l~~~~  129 (454)
T PLN02696         58 KPISLLGSTGSIGTQTLDIVAENPDKFKVVALAAGSNV-------TLLADQVR-KFKPKLVAVRNESLVDELKEALADLD  129 (454)
T ss_pred             cEEEEecCCcHhhHHHHHHHHhCccccEEEEEECCCCH-------HHHHHHHH-HhCCCEEEEcCHHHHHHHHHhhcCCC
Confidence            58999999999999999999886  4577777654432       12345556 7777665543321  0111       


Q ss_pred             ---------HHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          227 ---------AALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       227 ---------~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                               +.+.++... .+|+|+.+++| ..+...+..++.|-++.+.
T Consensus       130 ~~~~vl~G~egl~~la~~~evDiVV~AIvG~aGL~pTl~AIkaGK~VALA  179 (454)
T PLN02696        130 DKPEIIPGEEGIVEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  179 (454)
T ss_pred             CCcEEEECHHHHHHHHcCCCCCEEEEeCccccchHHHHHHHHCCCcEEEe
Confidence                     122333333 68999999888 6777778888877665543

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.76  E-value=0.41  Score=41.92  Aligned_cols=87  Identities=15%  Similarity=0.188  Sum_probs=51.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcc------hhcc-------ccchhHHHHHHHhhcCCCEEEecCCc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSRE------KVWL-------IPMQSQLVELLKNKFGFDDAFNYKEE  222 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~------~~~~-------~~~~~~~~~~~~~~~g~~~vv~~~~~  222 (356)
                      ..+|+|.| .|++|..++..+..+|. +++.++...-      +.-+       -+-.+++++.++ ++....-++....
T Consensus        21 ~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~-~~np~~~i~~~~~   98 (228)
T cd00757          21 NARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLR-AINPDVEIEAYNE   98 (228)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHH-HhCCCCEEEEecc
Confidence            46899999 99999999999999998 6666643210      1000       022355566666 5554322222221


Q ss_pred             ccH-HHHHHHhCCCCccEEEeCCCch
Q 018404          223 NDL-DAALKRCFPEGIDIYFEHVGGK  247 (356)
Q Consensus       223 ~~~-~~~~~~~~~~~~d~vid~~g~~  247 (356)
                       .+ .+.+.++. .++|+||+|....
T Consensus        99 -~i~~~~~~~~~-~~~DvVi~~~d~~  122 (228)
T cd00757          99 -RLDAENAEELI-AGYDLVLDCTDNF  122 (228)
T ss_pred             -eeCHHHHHHHH-hCCCEEEEcCCCH
Confidence             22 12233322 2599999999984

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=94.76  E-value=0.18  Score=44.51  Aligned_cols=38  Identities=26%  Similarity=0.349  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .+..++|+||++++|++++.-+...|++|+++.++.+.
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~   41 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEE   41 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCch
Confidence            46789999999999999998888999998888877553

>PRK06849 hypothetical protein; Provisional

Probab=94.74  E-value=0.29  Score=46.53  Aligned_cols=96  Identities=9%  Similarity=0.085  Sum_probs=62.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEec--CCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNY--KEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~--~~~~~~~~~~~~  231 (356)
                      ...+|||+|+..++|+..+..++..|.+|+++++.+...          .... + .++  ..+..  .+.+.+.+.+.+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~----------~~~s-~-~~d~~~~~p~p~~d~~~~~~~L~~   70 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL----------SRFS-R-AVDGFYTIPSPRWDPDAYIQALLS   70 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH----------HHHH-H-hhhheEEeCCCCCCHHHHHHHHHH
Confidence            357899999888899999999999999999999876543          2111 1 121  22311  111256777777


Q ss_pred             hCCC-CccEEEeCCCch-HHHHHHHhhccCCeEE
Q 018404          232 CFPE-GIDIYFEHVGGK-MLDAVLLNMRLHGRIA  263 (356)
Q Consensus       232 ~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v  263 (356)
                      +... ++|++|-+.... .+......+.++.++.
T Consensus        71 i~~~~~id~vIP~~e~~~~~a~~~~~l~~~~~v~  104 (389)
T PRK06849         71 IVQRENIDLLIPTCEEVFYLSHAKEELSAYCEVL  104 (389)
T ss_pred             HHHHcCCCEEEECChHHHhHHhhhhhhcCCcEEE
Confidence            6655 899999877653 3333445566655443

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.72  E-value=0.37  Score=43.42  Aligned_cols=95  Identities=16%  Similarity=0.068  Sum_probs=65.0

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      .||+....+..|....---.|.+|+|.|-+.-+|.-+.+++...||.|++.-+.-.                        
T Consensus       139 ~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~------------------------  194 (285)
T PRK10792        139 RPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK------------------------  194 (285)
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC------------------------
Confidence            46655555556644322235899999998888999999999999999887653311                        


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                             ++.+.++     .+|++|.++|...+-. -..++++-.++.+|..
T Consensus       195 -------~l~~~~~-----~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin  233 (285)
T PRK10792        195 -------NLRHHVR-----NADLLVVAVGKPGFIP-GEWIKPGAIVIDVGIN  233 (285)
T ss_pred             -------CHHHHHh-----hCCEEEEcCCCccccc-HHHcCCCcEEEEcccc
Confidence                   1111222     2789999998843322 2778899899999853

>PRK07340 ornithine cyclodeaminase; Validated

Probab=94.72  E-value=0.35  Score=44.35  Aligned_cols=101  Identities=9%  Similarity=0.029  Sum_probs=65.5

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCccc
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKL-MGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEND  224 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~-~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  224 (356)
                      +...+++ ....+++|+| +|..|.+.+..+.. .+. +|.+..++.++.      +++.+.+. +.+....  . +  +
T Consensus       116 a~~~La~-~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a------~~~a~~~~-~~~~~~~--~-~--~  181 (304)
T PRK07340        116 AARTLAP-APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASA------AAFCAHAR-ALGPTAE--P-L--D  181 (304)
T ss_pred             HHHHhCC-CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHH------HHHHHHHH-hcCCeeE--E-C--C
Confidence            3434444 3457899999 89999988888765 565 788888888876      23333333 2233211  1 1  3


Q ss_pred             HHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccc
Q 018404          225 LDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                      ..+.+.     .+|+|+.|+.+ ..+-..+  ++|+-++..+|..
T Consensus       182 ~~~av~-----~aDiVitaT~s~~Pl~~~~--~~~g~hi~~iGs~  219 (304)
T PRK07340        182 GEAIPE-----AVDLVVTATTSRTPVYPEA--ARAGRLVVAVGAF  219 (304)
T ss_pred             HHHHhh-----cCCEEEEccCCCCceeCcc--CCCCCEEEecCCC
Confidence            444443     48999999998 3333333  7899999999973

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=94.66  E-value=0.18  Score=47.22  Aligned_cols=50  Identities=14%  Similarity=0.131  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          142 MTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       142 ~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +|||.-|+....+ ++.+|+|+||+|-+|..++..+...|.+|+++++...
T Consensus         1 ~~~~~~~~~~~~~-~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~   50 (348)
T PRK15181          1 MTAYEELRTKLVL-APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST   50 (348)
T ss_pred             Cchhhhhhhcccc-cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            3677777554443 4578999999999999999999999999999987544

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.65  E-value=0.84  Score=34.95  Aligned_cols=91  Identities=20%  Similarity=0.127  Sum_probs=62.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccE
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDI  239 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~  239 (356)
                      |+|.| .|.+|...++.++..+.+|++++.++++.          +.++ +.|.. ++..+.  .-.+.+++..-..++.
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~----------~~~~-~~~~~-~i~gd~--~~~~~l~~a~i~~a~~   65 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERV----------EELR-EEGVE-VIYGDA--TDPEVLERAGIEKADA   65 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHH----------HHHH-HTTSE-EEES-T--TSHHHHHHTTGGCESE
T ss_pred             eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHH----------HHHH-hcccc-cccccc--hhhhHHhhcCccccCE
Confidence            67888 79999999999999777999999999988          8888 77753 443332  2233455442237899


Q ss_pred             EEeCCCchHH----HHHHHhhccCCeEEEE
Q 018404          240 YFEHVGGKML----DAVLLNMRLHGRIAAC  265 (356)
Q Consensus       240 vid~~g~~~~----~~~~~~l~~~G~~v~~  265 (356)
                      ++-+.+.+..    ....+.+.+..+++..
T Consensus        66 vv~~~~~d~~n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   66 VVILTDDDEENLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             EEEESSSHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred             EEEccCCHHHHHHHHHHHHHHCCCCeEEEE
Confidence            9988887432    2344555666777655

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK14982 acyl-ACP reductase; Provisional

Probab=94.65  E-value=0.19  Score=46.67  Aligned_cols=93  Identities=18%  Similarity=0.190  Sum_probs=60.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKL-MGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~-~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  232 (356)
                      -.+.+|+|+||+|.+|..+++.+.. .|+ +++.+.++.+++          ..+.++++...+.      ++.+.+.  
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl----------~~La~el~~~~i~------~l~~~l~--  214 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERL----------QELQAELGGGKIL------SLEEALP--  214 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHH----------HHHHHHhccccHH------hHHHHHc--
Confidence            3568999999999999988887764 465 888888887776          5554344321111      2222222  


Q ss_pred             CCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccc
Q 018404          233 FPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       233 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                         .+|+|+.+++. ..+..-...+++.-.++.++.+
T Consensus       215 ---~aDiVv~~ts~~~~~~I~~~~l~~~~~viDiAvP  248 (340)
T PRK14982        215 ---EADIVVWVASMPKGVEIDPETLKKPCLMIDGGYP  248 (340)
T ss_pred             ---cCCEEEECCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence               48999999887 4321222355666677788764

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=94.63  E-value=0.086  Score=48.48  Aligned_cols=71  Identities=18%  Similarity=0.207  Sum_probs=48.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|+|.||+|.+|..+++.+...|.+|++++++.++.          ..+. ..+...+ .|..+.    +.+.+... ++
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~-~~~~~~~~~D~~~~----~~l~~~~~-~~   65 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR----------RNLE-GLDVEIVEGDLRDP----ASLRKAVA-GC   65 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc----------cccc-cCCceEEEeeCCCH----HHHHHHHh-CC
Confidence            689999999999999999988999999999887664          3333 3344322 233332    22333222 47


Q ss_pred             cEEEeCCC
Q 018404          238 DIYFEHVG  245 (356)
Q Consensus       238 d~vid~~g  245 (356)
                      |.||.+.+
T Consensus        66 d~vi~~a~   73 (328)
T TIGR03466        66 RALFHVAA   73 (328)
T ss_pred             CEEEEece
Confidence            99999875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=94.61  E-value=0.12  Score=46.02  Aligned_cols=73  Identities=11%  Similarity=0.065  Sum_probs=46.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-Cc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~  237 (356)
                      +|||.||+|= |..++..+...|.+|+++.+++...          +.+. ..|...+.-..-  +-. .+.++..+ ++
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~----------~~~~-~~g~~~v~~g~l--~~~-~l~~~l~~~~i   66 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK----------HLYP-IHQALTVHTGAL--DPQ-ELREFLKRHSI   66 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc----------cccc-ccCCceEEECCC--CHH-HHHHHHHhcCC
Confidence            6999997775 9988877778899999999998775          4554 444433332211  111 13333223 67


Q ss_pred             cEEEeCCCc
Q 018404          238 DIYFEHVGG  246 (356)
Q Consensus       238 d~vid~~g~  246 (356)
                      |+|+|++..
T Consensus        67 ~~VIDAtHP   75 (256)
T TIGR00715        67 DILVDATHP   75 (256)
T ss_pred             CEEEEcCCH
Confidence            777777663

This enzyme was found to be a monomer by gel filtration.

>PLN02686 cinnamoyl-CoA reductase

Probab=94.61  E-value=0.17  Score=47.78  Aligned_cols=41  Identities=12%  Similarity=0.089  Sum_probs=35.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ...+.+|||+||+|.+|..++..+...|++|+++.++.+..
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~   90 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDK   90 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            34578999999999999999999999999999888776554

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.59  E-value=0.21  Score=38.99  Aligned_cols=90  Identities=14%  Similarity=0.150  Sum_probs=52.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcc-hhccccchhHHHHHHHhhcC----C-CEEEecCCcccHHHHHHH
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSRE-KVWLIPMQSQLVELLKNKFG----F-DDAFNYKEENDLDAALKR  231 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~g----~-~~vv~~~~~~~~~~~~~~  231 (356)
                      +|.|.||+|-+|..+++++..+ .++++.+.++.. .-          ..+...++    . +..+...+    .+.+  
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g----------~~~~~~~~~~~~~~~~~~~~~~----~~~~--   64 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAG----------KPLSEVFPHPKGFEDLSVEDAD----PEEL--   64 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTT----------SBHHHTTGGGTTTEEEBEEETS----GHHH--
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccC----------CeeehhccccccccceeEeecc----hhHh--
Confidence            6899999999999999988886 556555554444 21          11221222    2 11222111    1112  


Q ss_pred             hCCCCccEEEeCCCchHHHHHHHhh-ccCCeEEEEcc
Q 018404          232 CFPEGIDIYFEHVGGKMLDAVLLNM-RLHGRIAACGM  267 (356)
Q Consensus       232 ~~~~~~d~vid~~g~~~~~~~~~~l-~~~G~~v~~g~  267 (356)
                         ..+|+||.|.+.....+....+ .++-+++..+.
T Consensus        65 ---~~~Dvvf~a~~~~~~~~~~~~~~~~g~~ViD~s~   98 (121)
T PF01118_consen   65 ---SDVDVVFLALPHGASKELAPKLLKAGIKVIDLSG   98 (121)
T ss_dssp             ---TTESEEEE-SCHHHHHHHHHHHHHTTSEEEESSS
T ss_pred             ---hcCCEEEecCchhHHHHHHHHHhhCCcEEEeCCH
Confidence               2599999999996555555555 55556776654

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=94.58  E-value=0.67  Score=44.75  Aligned_cols=104  Identities=15%  Similarity=0.152  Sum_probs=64.6

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA  228 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  228 (356)
                      ..++++|++||=.+  .|.|..+++++..+  +.+|++++.+++++      +.+.+.++ ++|...+ ..... +.. .
T Consensus       232 ~l~~~~g~~VLD~c--agpGgkt~~la~~~~~~g~V~a~Dis~~rl------~~~~~n~~-r~g~~~v-~~~~~-Da~-~  299 (431)
T PRK14903        232 LMELEPGLRVLDTC--AAPGGKTTAIAELMKDQGKILAVDISREKI------QLVEKHAK-RLKLSSI-EIKIA-DAE-R  299 (431)
T ss_pred             HhCCCCCCEEEEeC--CCccHHHHHHHHHcCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCeE-EEEEC-chh-h
Confidence            45678898866554  45666677778777  46999999999987      33344444 5676432 11111 211 1


Q ss_pred             HHHhCCCCccEEEe---CCCch--------------------------HHHHHHHhhccCCeEEEEc
Q 018404          229 LKRCFPEGIDIYFE---HVGGK--------------------------MLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       229 ~~~~~~~~~d~vid---~~g~~--------------------------~~~~~~~~l~~~G~~v~~g  266 (356)
                      +.+...+.||.|+-   |+|..                          .+..+++.|++||.++..-
T Consensus       300 l~~~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT  366 (431)
T PRK14903        300 LTEYVQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYST  366 (431)
T ss_pred             hhhhhhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence            22122346999874   55532                          2567889999999987554

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=94.57  E-value=0.36  Score=43.80  Aligned_cols=152  Identities=18%  Similarity=0.187  Sum_probs=85.6

Q ss_pred             CCCCCEEEEccccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHH
Q 018404           96 FKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQ  175 (356)
Q Consensus        96 ~~~Gd~V~~~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~  175 (356)
                      ++.|++.+..-+|.+|..-.... .++++| +  +.+-.+.=|.+ ..+..+|...  +++|.+|+=.|  .|.|.++|.
T Consensus       109 ~rig~~f~I~Psw~~~~~~~~~~-~i~lDP-G--lAFGTG~HpTT-~lcL~~Le~~--~~~g~~vlDvG--cGSGILaIA  179 (300)
T COG2264         109 VRIGERFVIVPSWREYPEPSDEL-NIELDP-G--LAFGTGTHPTT-SLCLEALEKL--LKKGKTVLDVG--CGSGILAIA  179 (300)
T ss_pred             EEeeeeEEECCCCccCCCCCCce-EEEEcc-c--cccCCCCChhH-HHHHHHHHHh--hcCCCEEEEec--CChhHHHHH
Confidence            67888877777888875443333 788844 4  44422222222 2233345433  56899999888  344666665


Q ss_pred             HHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCch----HHH
Q 018404          176 FAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK----MLD  250 (356)
Q Consensus       176 la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~----~~~  250 (356)
                      .++ +|+ +|++++-.+-..      .+..+.++ .-+.......... .   ......++.+|+|+-.+=.+    ...
T Consensus       180 a~k-LGA~~v~g~DiDp~AV------~aa~eNa~-~N~v~~~~~~~~~-~---~~~~~~~~~~DvIVANILA~vl~~La~  247 (300)
T COG2264         180 AAK-LGAKKVVGVDIDPQAV------EAARENAR-LNGVELLVQAKGF-L---LLEVPENGPFDVIVANILAEVLVELAP  247 (300)
T ss_pred             HHH-cCCceEEEecCCHHHH------HHHHHHHH-HcCCchhhhcccc-c---chhhcccCcccEEEehhhHHHHHHHHH
Confidence            544 466 799999776554      11112222 2233210000000 1   11112224799998766433    456


Q ss_pred             HHHHhhccCCeEEEEccc
Q 018404          251 AVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       251 ~~~~~l~~~G~~v~~g~~  268 (356)
                      ...+.++|+|++++.|..
T Consensus       248 ~~~~~lkpgg~lIlSGIl  265 (300)
T COG2264         248 DIKRLLKPGGRLILSGIL  265 (300)
T ss_pred             HHHHHcCCCceEEEEeeh
Confidence            778899999999999864

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.56  E-value=0.31  Score=47.15  Aligned_cols=36  Identities=22%  Similarity=0.326  Sum_probs=31.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      +|.|.||.|.+|.+.+..++..|.+|++.++++++.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~   37 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKG   37 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHH
Confidence            588999899999999999999999999999887663

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.52  E-value=0.36  Score=42.09  Aligned_cols=94  Identities=18%  Similarity=0.213  Sum_probs=60.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHHh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~  232 (356)
                      -+|-+||=.|..||  +++ .-+.++|++|++++-+++-.          +.++ .....  --+||...  ..+.+.+.
T Consensus        58 l~g~~vLDvGCGgG--~Ls-e~mAr~Ga~VtgiD~se~~I----------~~Ak-~ha~e~gv~i~y~~~--~~edl~~~  121 (243)
T COG2227          58 LPGLRVLDVGCGGG--ILS-EPLARLGASVTGIDASEKPI----------EVAK-LHALESGVNIDYRQA--TVEDLASA  121 (243)
T ss_pred             CCCCeEEEecCCcc--Hhh-HHHHHCCCeeEEecCChHHH----------HHHH-Hhhhhccccccchhh--hHHHHHhc
Confidence            46788988885444  444 44445689999999998877          6665 32221  12556553  23333332


Q ss_pred             CCCCccEEEe-----CCCc--hHHHHHHHhhccCCeEEEE
Q 018404          233 FPEGIDIYFE-----HVGG--KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       233 ~~~~~d~vid-----~~g~--~~~~~~~~~l~~~G~~v~~  265 (356)
                       ++.||+|+.     -+..  ..+..+.++++|+|.++..
T Consensus       122 -~~~FDvV~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         122 -GGQFDVVTCMEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             -CCCccEEEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence             148999975     4444  3678899999999998754

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.50  E-value=0.29  Score=45.08  Aligned_cols=35  Identities=29%  Similarity=0.352  Sum_probs=32.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      .|.+|.|+| .|.+|...+++++.+|++|++.+++.
T Consensus       144 ~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        144 KGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCc
Confidence            578999999 99999999999999999999998753

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=94.49  E-value=0.16  Score=47.27  Aligned_cols=35  Identities=17%  Similarity=0.255  Sum_probs=31.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      .+|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   35 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS   35 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence            37999999999999999999999999999987754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK01581 speE spermidine synthase; Validated

Probab=94.48  E-value=0.44  Score=44.49  Aligned_cols=97  Identities=11%  Similarity=0.087  Sum_probs=61.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcC---------C-CEEEecCCcc
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFG---------F-DDAFNYKEEN  223 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g---------~-~~vv~~~~~~  223 (356)
                      ...++|||.|  ||.|.++..+++.-+ .+|++++.+++-.          +.++ ++.         . +.-+...-. 
T Consensus       149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVI----------elAr-~~~~L~~~~~~~~~DpRV~vvi~-  214 (374)
T PRK01581        149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMI----------NMAR-NVPELVSLNKSAFFDNRVNVHVC-  214 (374)
T ss_pred             CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHH----------HHHH-hccccchhccccCCCCceEEEEC-
Confidence            3456999999  456667777777654 5899999988877          7776 421         1 111111111 


Q ss_pred             cHHHHHHHhCCCCccEEEeCCCc------------hHHHHHHHhhccCCeEEEEc
Q 018404          224 DLDAALKRCFPEGIDIYFEHVGG------------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid~~g~------------~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +..+.+.+ ..+.+|+||--...            +.+..+.+.|+|+|.++.-.
T Consensus       215 Da~~fL~~-~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        215 DAKEFLSS-PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             cHHHHHHh-cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            44444543 23479998764321            25678899999999987653

>PRK08309 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.21  Score=41.92  Aligned_cols=91  Identities=19%  Similarity=0.165  Sum_probs=53.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC---CE--EEecCCcccHHHHHHHhC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF---DD--AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~--vv~~~~~~~~~~~~~~~~  233 (356)
                      +++|.||+| +|..+++.+...|++|++.++++++.          +.+...++.   ..  ..|..+.+++...+.+..
T Consensus         2 ~vlVtGGtG-~gg~la~~L~~~G~~V~v~~R~~~~~----------~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l   70 (177)
T PRK08309          2 HALVIGGTG-MLKRVSLWLCEKGFHVSVIARREVKL----------ENVKRESTTPESITPLPLDYHDDDALKLAIKSTI   70 (177)
T ss_pred             EEEEECcCH-HHHHHHHHHHHCcCEEEEEECCHHHH----------HHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            589999874 55556666666899999999887665          444322321   11  135555434444444432


Q ss_pred             C--CCccEEEeCCCchHHHHHHHhhccCC
Q 018404          234 P--EGIDIYFEHVGGKMLDAVLLNMRLHG  260 (356)
Q Consensus       234 ~--~~~d~vid~~g~~~~~~~~~~l~~~G  260 (356)
                      .  +++|.+|+.+-...-.......+..|
T Consensus        71 ~~~g~id~lv~~vh~~~~~~~~~~~~~~g   99 (177)
T PRK08309         71 EKNGPFDLAVAWIHSSAKDALSVVCRELD   99 (177)
T ss_pred             HHcCCCeEEEEeccccchhhHHHHHHHHc
Confidence            2  37899998777654444444444433

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.46  E-value=0.67  Score=39.86  Aligned_cols=92  Identities=21%  Similarity=0.159  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|+|.| .|.+|..-++.+...|++|++++......        + ..+. +.|--..+. .+   +....  +  .
T Consensus         8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~--------l-~~l~-~~~~i~~~~-~~---~~~~d--l--~   68 (205)
T TIGR01470         8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESE--------L-TLLA-EQGGITWLA-RC---FDADI--L--E   68 (205)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHH--------H-HHHH-HcCCEEEEe-CC---CCHHH--h--C
Confidence            367999999 79999999999999999999888654321        1 2333 333211111 11   11111  1  2


Q ss_pred             CccEEEeCCCchHH-HHHHHhhccCCeEEEEc
Q 018404          236 GIDIYFEHVGGKML-DAVLLNMRLHGRIAACG  266 (356)
Q Consensus       236 ~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g  266 (356)
                      ++++||-+.+...+ .......+..|..+.+.
T Consensus        69 ~~~lVi~at~d~~ln~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        69 GAFLVIAATDDEELNRRVAHAARARGVPVNVV  100 (205)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHHHcCCEEEEC
Confidence            68999999998644 45555666678777654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=94.45  E-value=0.19  Score=47.30  Aligned_cols=57  Identities=19%  Similarity=0.200  Sum_probs=43.0

Q ss_pred             hcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          134 TGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       134 ~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +.+....+++- .++.....--.|.+|.|.| .|.+|..+++.+..+|++|++++.+..
T Consensus       185 aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG-~GNVg~~aa~~l~~~GAkvva~sds~g  241 (411)
T COG0334         185 ATGYGVFYAIR-EALKALGDDLEGARVAVQG-FGNVGQYAAEKLHELGAKVVAVSDSKG  241 (411)
T ss_pred             ccceehHHHHH-HHHHHcCCCcCCCEEEEEC-ccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence            44444444444 4554433214799999999 999999999999999999999998877

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=94.45  E-value=0.23  Score=40.66  Aligned_cols=35  Identities=14%  Similarity=0.175  Sum_probs=29.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcch
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREK  193 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~  193 (356)
                      +++|.||+|++|.++++.+...|+ .|+.+.++++.
T Consensus         2 ~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~   37 (180)
T smart00822        2 TYLITGGLGGLGLELARWLAERGARHLVLLSRSGPD   37 (180)
T ss_pred             EEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCC
Confidence            689999999999999988888887 67777776544

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.43  E-value=0.42  Score=43.09  Aligned_cols=94  Identities=19%  Similarity=0.119  Sum_probs=63.5

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +||+....+..|....---.|.+|+|.|.+..+|.-++.++...||.|++.- +..+                       
T Consensus       137 ~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~h-s~t~-----------------------  192 (285)
T PRK14191        137 VPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCH-ILTK-----------------------  192 (285)
T ss_pred             CCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEe-CCcH-----------------------
Confidence            4555555555554432223699999999888999999999999999988653 2111                       


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEcc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  267 (356)
                             ++.+.++     .+|+|+-++|...+-. -+.++++..++.+|.
T Consensus       193 -------~l~~~~~-----~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi  230 (285)
T PRK14191        193 -------DLSFYTQ-----NADIVCVGVGKPDLIK-ASMVKKGAVVVDIGI  230 (285)
T ss_pred             -------HHHHHHH-----hCCEEEEecCCCCcCC-HHHcCCCcEEEEeec
Confidence                   1111222     2788898888754422 346688889999986

>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Probab=94.41  E-value=0.75  Score=43.12  Aligned_cols=99  Identities=18%  Similarity=0.184  Sum_probs=65.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc--ccHHH------
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE--NDLDA------  227 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~------  227 (356)
                      .+|.|+|++|++|..++.+.+..  ..+|++.+-..+.       +.+.+.++ +|....++-.++.  ..+.+      
T Consensus         2 k~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~~n~-------~~L~~q~~-~f~p~~v~i~d~~~~~~l~~~l~~~~   73 (389)
T TIGR00243         2 KQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAGKNV-------ALMVEQIL-EFRPKFVAIDDEASLKDLKTMLQQQG   73 (389)
T ss_pred             ceEEEEecChHHHHHHHHHHHhCccccEEEEEEcCCCH-------HHHHHHHH-HcCCCEEEEcCHHHHHHHHHHhhcCC
Confidence            47999999999999999999876  4688888765443       22446666 7887665543331  01111      


Q ss_pred             ----------HHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEE
Q 018404          228 ----------ALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAA  264 (356)
Q Consensus       228 ----------~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~  264 (356)
                                .+.+.... .+|+|+.++-| ..+...+..++.+-++.+
T Consensus        74 ~~~~v~~G~~~l~~l~~~~~~D~vv~AivG~aGL~pt~~Ai~~gk~iaL  122 (389)
T TIGR00243        74 SRTEVLVGEEGICEMAALEDVDQVMNAIVGAAGLLPTLAAIRAGKTIAL  122 (389)
T ss_pred             CCcEEEECHHHHHHHHcCCCCCEEEEhhhcHhhHHHHHHHHHCCCcEEE
Confidence                      12222222 58999998777 778888888877765443

1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.

>PLN00203 glutamyl-tRNA reductase

Probab=94.36  E-value=0.26  Score=48.59  Aligned_cols=71  Identities=21%  Similarity=0.318  Sum_probs=51.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcC-CCE-EEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFG-FDD-AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~-vv~~~~~~~~~~~~~~~~  233 (356)
                      +.+|+|+| +|.+|.++++.+...|+ +|+++.++.++.          +.+.++++ ... +....   +..+.+.   
T Consensus       266 ~kkVlVIG-AG~mG~~~a~~L~~~G~~~V~V~nRs~era----------~~La~~~~g~~i~~~~~~---dl~~al~---  328 (519)
T PLN00203        266 SARVLVIG-AGKMGKLLVKHLVSKGCTKMVVVNRSEERV----------AALREEFPDVEIIYKPLD---EMLACAA---  328 (519)
T ss_pred             CCEEEEEe-CHHHHHHHHHHHHhCCCCeEEEEeCCHHHH----------HHHHHHhCCCceEeecHh---hHHHHHh---
Confidence            67999999 69999999999999997 799999998887          66654554 221 11111   2222232   


Q ss_pred             CCCccEEEeCCCc
Q 018404          234 PEGIDIYFEHVGG  246 (356)
Q Consensus       234 ~~~~d~vid~~g~  246 (356)
                        .+|+||.|++.
T Consensus       329 --~aDVVIsAT~s  339 (519)
T PLN00203        329 --EADVVFTSTSS  339 (519)
T ss_pred             --cCCEEEEccCC
Confidence              58999999987

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=94.35  E-value=0.25  Score=48.30  Aligned_cols=81  Identities=15%  Similarity=0.177  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEE----EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA----FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v----v~~~~~~~~~~~~~  230 (356)
                      .|++|||+||+|++|...+.-.-..+. +++..++++.++      .++..++++.++...+    -|-++    .+.+.
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~------~~i~~el~~~~~~~~~~~~igdVrD----~~~~~  318 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKL------YLIDMELREKFPELKLRFYIGDVRD----RDRVE  318 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHH------HHHHHHHHhhCCCcceEEEeccccc----HHHHH
Confidence            589999999999999766644444466 788888887765      3444555544453221    12222    23444


Q ss_pred             HhCCC-CccEEEeCCCc
Q 018404          231 RCFPE-GIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~~-~~d~vid~~g~  246 (356)
                      +...+ ++|+||.+..-
T Consensus       319 ~~~~~~kvd~VfHAAA~  335 (588)
T COG1086         319 RAMEGHKVDIVFHAAAL  335 (588)
T ss_pred             HHHhcCCCceEEEhhhh
Confidence            44445 79999998874

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.34  E-value=0.57  Score=40.96  Aligned_cols=96  Identities=19%  Similarity=0.219  Sum_probs=58.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCE---EEEEeCC----cchhc-cccchhHHHHHHHhhcCCCEEEecCCcccHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCY---VVGSAGS----REKVW-LIPMQSQLVELLKNKFGFDDAFNYKEENDLD  226 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~---Vi~~~~~----~~~~~-~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~  226 (356)
                      -++.+|+|+| +|+.|..++..+...|++   ++.++++    .++.. |.+.+   .+.++ .++... .+   . ++.
T Consensus        23 l~~~rvlvlG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~---~~la~-~~~~~~-~~---~-~l~   92 (226)
T cd05311          23 IEEVKIVING-AGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDK---NEIAK-ETNPEK-TG---G-TLK   92 (226)
T ss_pred             ccCCEEEEEC-chHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHH---HHHHH-HhccCc-cc---C-CHH
Confidence            4567999999 799999999988888984   8888887    34320 10000   12233 332211 11   1 343


Q ss_pred             HHHHHhCCCCccEEEeCCCchHH-HHHHHhhccCCeEEEE
Q 018404          227 AALKRCFPEGIDIYFEHVGGKML-DAVLLNMRLHGRIAAC  265 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~  265 (356)
                      +.++     ++|++|.+++...+ ...++.+.++..+..+
T Consensus        93 ~~l~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~l  127 (226)
T cd05311          93 EALK-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFAL  127 (226)
T ss_pred             HHHh-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEe
Confidence            4443     38999999975333 4667777776665544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=94.32  E-value=0.27  Score=45.04  Aligned_cols=78  Identities=26%  Similarity=0.388  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC-CC---EEE--ecCCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG-FD---DAF--NYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~---~vv--~~~~~~~~~~~~  229 (356)
                      .+..|+|+||+|=+|...+..+-..|++|.+++|+++..       .-.+.++ ++. +.   .++  |-.+.+.|.+.+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~-------k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai   76 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDE-------KKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAI   76 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchh-------hhHHHHH-hcccCcccceEEeccccccchHHHHH
Confidence            567999999999999999999999999999999998863       0002455 554 21   222  222222455555


Q ss_pred             HHhCCCCccEEEeCCCc
Q 018404          230 KRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~  246 (356)
                      .     |+|.||.+...
T Consensus        77 ~-----gcdgVfH~Asp   88 (327)
T KOG1502|consen   77 D-----GCDGVFHTASP   88 (327)
T ss_pred             h-----CCCEEEEeCcc
Confidence            4     58899886663

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=94.32  E-value=3.5  Score=36.47  Aligned_cols=95  Identities=16%  Similarity=0.176  Sum_probs=60.0

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      ..++.+||-.| +|. |..+..+++ .|.+|++++.+++.+          +.+++.......+..    ++.+ + ...
T Consensus        40 ~~~~~~vLDiG-cG~-G~~~~~l~~-~~~~v~~~D~s~~~l----------~~a~~~~~~~~~~~~----d~~~-~-~~~  100 (251)
T PRK10258         40 QRKFTHVLDAG-CGP-GWMSRYWRE-RGSQVTALDLSPPML----------AQARQKDAADHYLAG----DIES-L-PLA  100 (251)
T ss_pred             ccCCCeEEEee-CCC-CHHHHHHHH-cCCeEEEEECCHHHH----------HHHHhhCCCCCEEEc----Cccc-C-cCC
Confidence            34567899998 443 666655554 589999999998887          777623222222221    1111 1 111


Q ss_pred             CCCccEEEeCCC-----c--hHHHHHHHhhccCCeEEEEcc
Q 018404          234 PEGIDIYFEHVG-----G--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       234 ~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+.+|+|+....     .  ..+..+.+.|+|+|.++....
T Consensus       101 ~~~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        101 TATFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             CCcEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            236999986543     1  367889999999999987643

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=94.29  E-value=0.26  Score=46.95  Aligned_cols=76  Identities=17%  Similarity=0.251  Sum_probs=53.0

Q ss_pred             CCCCEEEEecC----------------CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          155 KKGEYIYVSAA----------------SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       155 ~~g~~VlI~ga----------------~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      -+|.+|||+||                +|.+|.+.++.+...|++|+.+.++.+ .          +.   ..+. ..++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~----------~~---~~~~-~~~d  250 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-L----------PT---PAGV-KRID  250 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-c----------cC---CCCc-EEEc
Confidence            36889999999                566999999999999999999987643 2          11   1122 2344


Q ss_pred             cCCcccHHHHHHHhCCCCccEEEeCCCc
Q 018404          219 YKEENDLDAALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~d~vid~~g~  246 (356)
                      ..+..++.+.+.+.. +.+|++|.+.|-
T Consensus       251 v~~~~~~~~~v~~~~-~~~DilI~~Aav  277 (399)
T PRK05579        251 VESAQEMLDAVLAAL-PQADIFIMAAAV  277 (399)
T ss_pred             cCCHHHHHHHHHHhc-CCCCEEEEcccc
Confidence            444335555565443 368999999885

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=94.29  E-value=1.5  Score=39.24  Aligned_cols=102  Identities=17%  Similarity=0.176  Sum_probs=62.3

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ..+++|++||=.+  .+.|..++.+++.++  ..|++++.+++++      +.+.+.++ ..|...+.-...  +.. .+
T Consensus        67 l~~~~g~~VLDl~--ag~G~kt~~la~~~~~~g~v~a~D~~~~~l------~~~~~n~~-~~g~~~v~~~~~--D~~-~~  134 (264)
T TIGR00446        67 LEPDPPERVLDMA--AAPGGKTTQISALMKNEGAIVANEFSKSRT------KVLIANIN-RCGVLNVAVTNF--DGR-VF  134 (264)
T ss_pred             hCCCCcCEEEEEC--CCchHHHHHHHHHcCCCCEEEEEcCCHHHH------HHHHHHHH-HcCCCcEEEecC--CHH-Hh
Confidence            4578899876665  445666666677663  4899999998887      33444445 566643211111  221 11


Q ss_pred             HHhCCCCccEEEe---CCCc--------------------------hHHHHHHHhhccCCeEEEEc
Q 018404          230 KRCFPEGIDIYFE---HVGG--------------------------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       230 ~~~~~~~~d~vid---~~g~--------------------------~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ... .+.+|.||-   |+|.                          +.+..++++|+++|+++...
T Consensus       135 ~~~-~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYst  199 (264)
T TIGR00446       135 GAA-VPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYST  199 (264)
T ss_pred             hhh-ccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            111 125898874   5552                          25678888999999988553

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.28  E-value=0.3  Score=41.87  Aligned_cols=81  Identities=16%  Similarity=0.217  Sum_probs=53.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      -+|.+|+|.| .|.+|..+++.+...|++|++++++.++.          +.+.+.++.. .++..   +    +.   .
T Consensus        26 l~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~----------~~~~~~~g~~-~v~~~---~----l~---~   83 (200)
T cd01075          26 LEGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADINEEAV----------ARAAELFGAT-VVAPE---E----IY---S   83 (200)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHH----------HHHHHHcCCE-EEcch---h----hc---c
Confidence            3578999999 78999999999999999999998887776          6665355643 33221   1    11   1


Q ss_pred             CCccEEEeCCCc-hHHHHHHHhhc
Q 018404          235 EGIDIYFEHVGG-KMLDAVLLNMR  257 (356)
Q Consensus       235 ~~~d~vid~~g~-~~~~~~~~~l~  257 (356)
                      ..+|+++-|..+ ..-...++.|+
T Consensus        84 ~~~Dv~vp~A~~~~I~~~~~~~l~  107 (200)
T cd01075          84 VDADVFAPCALGGVINDDTIPQLK  107 (200)
T ss_pred             ccCCEEEecccccccCHHHHHHcC
Confidence            147888865444 23334445553

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=94.27  E-value=0.51  Score=45.77  Aligned_cols=103  Identities=20%  Similarity=0.256  Sum_probs=61.8

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA  228 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  228 (356)
                      ...++++++||=.|  .|.|..++.+++.+  +.+|++++.++++.      +.+.+.++ ++|... +..... +..+.
T Consensus       245 ~l~~~~g~~VLDlg--aG~G~~t~~la~~~~~~~~v~avDi~~~~l------~~~~~n~~-~~g~~~-v~~~~~-D~~~~  313 (444)
T PRK14902        245 ALDPKGGDTVLDAC--AAPGGKTTHIAELLKNTGKVVALDIHEHKL------KLIEENAK-RLGLTN-IETKAL-DARKV  313 (444)
T ss_pred             HhCCCCCCEEEEeC--CCCCHHHHHHHHHhCCCCEEEEEeCCHHHH------HHHHHHHH-HcCCCe-EEEEeC-Ccccc
Confidence            45678888877665  44555666777766  46999999998876      22333444 566643 222111 22211


Q ss_pred             HHHhCCCCccEEEe---CCCc--------------------------hHHHHHHHhhccCCeEEEE
Q 018404          229 LKRCFPEGIDIYFE---HVGG--------------------------KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       229 ~~~~~~~~~d~vid---~~g~--------------------------~~~~~~~~~l~~~G~~v~~  265 (356)
                      ...+ .+.+|.||-   |+|.                          ..+..+++.|+++|+++..
T Consensus       314 ~~~~-~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys  378 (444)
T PRK14902        314 HEKF-AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS  378 (444)
T ss_pred             cchh-cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence            1111 136898874   4442                          2467788999999999854

>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]

Probab=94.25  E-value=1  Score=36.98  Aligned_cols=120  Identities=14%  Similarity=0.059  Sum_probs=85.8

Q ss_pred             hcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          134 TGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       134 ~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      .|.+|..-.+|-.+.. ..+.+.|-.|+=.|...  |-.+=.++++.  ..+++++..+.+=.          ..+.+.+
T Consensus        27 GaI~PsSs~lA~~M~s-~I~pesglpVlElGPGT--GV~TkaIL~~gv~~~~L~~iE~~~dF~----------~~L~~~~   93 (194)
T COG3963          27 GAILPSSSILARKMAS-VIDPESGLPVLELGPGT--GVITKAILSRGVRPESLTAIEYSPDFV----------CHLNQLY   93 (194)
T ss_pred             eeecCCcHHHHHHHHh-ccCcccCCeeEEEcCCc--cHhHHHHHhcCCCccceEEEEeCHHHH----------HHHHHhC
Confidence            4556777778887774 46778888999998543  44444555554  34788888887765          7776566


Q ss_pred             CCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc---------hHHHHHHHhhccCCeEEEEcc
Q 018404          212 GFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG---------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       212 g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ....+++.+.. ++...+.+..+.-+|.||.|+--         ..++.++..|+.+|.++++..
T Consensus        94 p~~~ii~gda~-~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftY  157 (194)
T COG3963          94 PGVNIINGDAF-DLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTY  157 (194)
T ss_pred             CCccccccchh-hHHHHHhhcCCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEe
Confidence            66677776654 55556777766689999988772         356788889999999997755

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.23  E-value=0.51  Score=42.60  Aligned_cols=94  Identities=18%  Similarity=0.166  Sum_probs=63.7

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +||+....+..|....---.|.+|.|.|.++-+|.-.+.++...|+.|++. .+..+                       
T Consensus       138 ~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~-~s~t~-----------------------  193 (284)
T PRK14179        138 IPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT-HSRTR-----------------------  193 (284)
T ss_pred             cCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE-CCCCC-----------------------
Confidence            455555555555543333468999999988999999999999999998876 22111                       


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                             +..+.++     ..|+||-++|. ..+...  .++++-.+|.+|..
T Consensus       194 -------~l~~~~~-----~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin  232 (284)
T PRK14179        194 -------NLAEVAR-----KADILVVAIGRGHFVTKE--FVKEGAVVIDVGMN  232 (284)
T ss_pred             -------CHHHHHh-----hCCEEEEecCccccCCHH--HccCCcEEEEecce
Confidence                   1111222     26888888888 444443  38888888898864

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=94.21  E-value=0.62  Score=45.06  Aligned_cols=104  Identities=19%  Similarity=0.244  Sum_probs=63.2

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA  228 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  228 (356)
                      ...+++|++||=.|  .|.|..+..+++.++  .+|++++.+++++      +.+.+.++ .+|...+. .... +....
T Consensus       247 ~l~~~~g~~VLDl~--ag~G~kt~~la~~~~~~g~v~a~D~~~~rl------~~~~~n~~-r~g~~~v~-~~~~-D~~~~  315 (434)
T PRK14901        247 LLDPQPGEVILDAC--AAPGGKTTHIAELMGDQGEIWAVDRSASRL------KKLQENAQ-RLGLKSIK-ILAA-DSRNL  315 (434)
T ss_pred             HhCCCCcCEEEEeC--CCCchhHHHHHHHhCCCceEEEEcCCHHHH------HHHHHHHH-HcCCCeEE-EEeC-Chhhc
Confidence            34678899876665  455666667777763  4899999998887      33444555 67775321 1111 22111


Q ss_pred             HHH--hCCCCccEEEe---CCCc--------------------------hHHHHHHHhhccCCeEEEE
Q 018404          229 LKR--CFPEGIDIYFE---HVGG--------------------------KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       229 ~~~--~~~~~~d~vid---~~g~--------------------------~~~~~~~~~l~~~G~~v~~  265 (356)
                      ...  ...+.||.|+-   |+|.                          ..+..+++.|++||+++..
T Consensus       316 ~~~~~~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys  383 (434)
T PRK14901        316 LELKPQWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA  383 (434)
T ss_pred             ccccccccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            100  11236898874   5652                          2367888999999998855

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=94.20  E-value=0.14  Score=44.08  Aligned_cols=103  Identities=22%  Similarity=0.257  Sum_probs=67.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC----CEEE--ecC--CcccHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF----DDAF--NYK--EENDLDAA  228 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~~vv--~~~--~~~~~~~~  228 (356)
                      |..+++.|+.||+|++...-+-..|+++.++..+.+..          +... ++.+    ..++  .++  +..++.+.
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~----------~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~   73 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP----------EAIA-KLQAINPSVSVIFIKCDVTNRGDLEAA   73 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH----------HHHH-HHhccCCCceEEEEEeccccHHHHHHH
Confidence            88999999999999999999999999999999887776          4443 4332    2222  111  11134444


Q ss_pred             HHHhCC--CCccEEEeCCCc---h---------------HHHHHHHhh-----ccCCeEEEEccccc
Q 018404          229 LKRCFP--EGIDIYFEHVGG---K---------------MLDAVLLNM-----RLHGRIAACGMISQ  270 (356)
Q Consensus       229 ~~~~~~--~~~d~vid~~g~---~---------------~~~~~~~~l-----~~~G~~v~~g~~~~  270 (356)
                      .++...  |.+|++|+..|-   +               ....++..+     .++|.+|.+++..+
T Consensus        74 f~ki~~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G  140 (261)
T KOG4169|consen   74 FDKILATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG  140 (261)
T ss_pred             HHHHHHHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence            444322  368999998883   1               112333333     46799999988654

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.19  E-value=0.45  Score=43.82  Aligned_cols=37  Identities=22%  Similarity=0.170  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++..++.+.
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~  171 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKS  171 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence            578999999 9999999999999999999999876543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=94.18  E-value=0.43  Score=44.67  Aligned_cols=40  Identities=18%  Similarity=0.170  Sum_probs=34.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ..+.+|||+||+|.+|..+++.+...|.+|+++.++.++.
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~   47 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKS   47 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence            3467999999999999999999998999999988876554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	356
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		1e-149
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		1e-145
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		1e-60
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		7e-58
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		1e-56
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		1e-56
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		2e-42
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		3e-42
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		2e-39
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		2e-36
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		1e-18
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		1e-18
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		1e-18
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		1e-12
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		2e-07
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		4e-07
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		5e-07
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		4e-06
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		5e-06
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		6e-06
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		4e-05
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		2e-04
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		2e-04
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		3e-04
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		7e-04

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score =  523 bits (1347), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 252/352 (71%), Positives = 298/352 (84%), Gaps = 10/352 (2%)
Query: 5   SEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS 64
           +E +SNKQVILKNYV G+PKE+DM +K  +I LKV EGSN ++VKNLYLSCDPYMR+RM 
Sbjct: 2   AEEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRMR 61
Query: 65  FNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIH 124
             +     SF PGSPI G+GVAKV++SG P+F+KGDLVWG TGWEEYS+I   Q LFKIH
Sbjct: 62  KIEGSYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIH 121
Query: 125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
             DVPLSYYTGILGMPGMTA+AGF+E+C+PKKGE ++VSAASGAVGQLVGQFAK++GCYV
Sbjct: 122 DKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYV 181
Query: 185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV 244
           VGSAGS+EK          V+LLK+KFGFD+AFNYKEE DL AALKR FP+GIDIYFE+V
Sbjct: 182 VGSAGSKEK----------VDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENV 231
Query: 245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
           GGKMLDAVL+NM+L+GRIA CGMISQYNL Q EGVHNL  ++ KRIRMEGF+VFDY+  Y
Sbjct: 232 GGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLY 291
Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
            ++L+ V+P I+ GKVVYVEDVA GLE+AP ALVGLFSGRN+GKQ+V+VSRE
Sbjct: 292 PKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score =  510 bits (1314), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 241/353 (68%), Positives = 292/353 (82%), Gaps = 16/353 (4%)
Query: 9   SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
           +NKQVILK+YV GFP E+D     +++ L+V EG+N++LVKNLYLSCDPYMR RM    D
Sbjct: 4   TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMG-KPD 62
Query: 69  PDFSS----FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKN-PQGLFKI 123
           P  ++    +TPG PI+G+GV+++++SGHP++KKGDL+WG   WEEYS+I       FKI
Sbjct: 63  PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI 122
Query: 124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
            HTDVPLSYYTG+LGMPGMTA+AGFYE+C+PK+GE +YVSAASGAVGQLVGQ AK+MGCY
Sbjct: 123 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY 182
Query: 184 VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEH 243
           VVGSAGS+EKV          +LLK KFGFDDAFNYKEE+DL AALKRCFP GIDIYFE+
Sbjct: 183 VVGSAGSKEKV----------DLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFEN 232
Query: 244 VGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQ 303
           VGGKMLDAVL+NM +HGRIA CGMISQYNL   EGVHNL N++YKR R++GFVV D++ +
Sbjct: 233 VGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDK 292
Query: 304 YSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
           YS+FL+ VLP+IREGK+ YVEDVADGLE AP ALVGLF G+NVGKQ+VVV+RE
Sbjct: 293 YSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score =  229 bits (585), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/349 (39%), Positives = 187/349 (53%), Gaps = 25/349 (7%)
Query: 10  NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP 69
           N+Q  L     G P         + +    E     ILVKN YLS DP MR  M+     
Sbjct: 8   NRQYQLAQRPSGLPGRDTFSFVETPLG---EPAEGQILVKNEYLSLDPAMRGWMN----- 59
Query: 70  DFSSFTP----GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHH 125
           D  S+ P    G  +   GV KV+ S HP F+ GD V G  G ++Y  I  P+G +K+  
Sbjct: 60  DARSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALGVQDY-FIGEPKGFYKVDP 118
Query: 126 TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVV 185
           +  PL  Y   LGM GMTA+    ++  PK GE + +S A+GAVG + GQ A+L GC VV
Sbjct: 119 SRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVV 178
Query: 186 GSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG 245
           G AG  EK             L  + GFD A +YK E DL A LKR  P+GID++F++VG
Sbjct: 179 GIAGGAEK----------CRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVG 227
Query: 246 GKMLDAVLLNMRLHGRIAACGMISQYNLSQP-EGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
           G++LD VL  +    RI  CG ISQYN  +   G  N ++++  R RMEG VV DY  ++
Sbjct: 228 GEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRF 287
Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
              L  +  ++ EGK+   ED+ +GLE  P  L+ LFSG N GK ++ V
Sbjct: 288 PEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score =  221 bits (562), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/348 (38%), Positives = 199/348 (57%), Gaps = 30/348 (8%)
Query: 11  KQVILKNYVEGFPKETDMLVKASSIS-LKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP 69
           K   LK + +G P ++D  +K   +  LK  E    +L++ L+LS DPYMR         
Sbjct: 9   KSWTLKKHFQGKPTQSDFELKTVELPPLKNGE----VLLEALFLSVDPYMRIASK----- 59
Query: 70  DFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHT--- 126
                  G+ + G  VA+VV+S +  F  G +V   +GW  +  I + +GL K+      
Sbjct: 60  ---RLKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTH-FISDGKGLEKLLTEWPD 115
Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
            +PLS   G +GMPG+TA+ G  E+C  K GE + VSAA+GAVG +VGQ AKL GC VVG
Sbjct: 116 KLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVG 175
Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
           +AGS EK+  +            + GFD AFNYK  N L+ ALK+  P+G D YF++VGG
Sbjct: 176 AAGSDEKIAYL-----------KQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224
Query: 247 KMLDAVLLNMRLHGRIAACGMISQYN-LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY- 304
           + L+ VL  M+  G+IA CG IS YN + Q     +  +++YK++R+EGF+V+ +     
Sbjct: 225 EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVR 284
Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV 352
            + L  ++ ++ EGK+ Y E V  G EN PAA + + +G N+GK +V 
Sbjct: 285 EKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVT 332

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score =  216 bits (551), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/347 (38%), Positives = 189/347 (54%), Gaps = 28/347 (8%)
Query: 10  NKQVILKNYVEGFPKETDMLVKASSIS-LKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
            K   LK +  G+P  +D  +K S +  LK  E    +L++ L+L+ DPYMR        
Sbjct: 24  TKTWTLKKHFVGYPTNSDFELKTSELPPLKNGE----VLLEALFLTVDPYMRVAAK---- 75
Query: 69  PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI--KNPQGLFKIHHT 126
                   G  + G  VAKVV+S +    KG +V  + GW  +S+   K+ + L      
Sbjct: 76  ----RLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPD 131
Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
            +PLS   G +GMPG+TA+ G  EIC  K GE + V+AA+GAVG +VGQ AKL GC VVG
Sbjct: 132 TIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVG 191
Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
           + GS EKV  +            K GFD  FNYK    L+  LK+  P+G D YF++VGG
Sbjct: 192 AVGSDEKVAYL-----------QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGG 240
Query: 247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMN-VVYKRIRMEGFVVFDYF-PQY 304
           +  + V+  M+  GRIA CG IS YN + P         V+Y+ +RME FVV+ +     
Sbjct: 241 EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDAR 300
Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
            + L  +L ++ EGK+ Y E + +G EN PAA +G+  G N+GK +V
Sbjct: 301 QKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 347

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score =  216 bits (550), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/347 (38%), Positives = 189/347 (54%), Gaps = 28/347 (8%)
Query: 10  NKQVILKNYVEGFPKETDMLVKASSIS-LKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
            K   LK +  G+P  +D  +K S +  LK    +  +L++ L+L+ DPYMR        
Sbjct: 3   TKTWTLKKHFVGYPTNSDFELKTSELPPLK----NGEVLLEALFLTVDPYMRVAAK---- 54
Query: 69  PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI--KNPQGLFKIHHT 126
                   G  + G  VAKVV+S +    KG +V  + GW  +S+   K+ + L      
Sbjct: 55  ----RLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPD 110
Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
            +PLS   G +GMPG+TA+ G  EIC  K GE + V+AA+GAVG +VGQ AKL GC VVG
Sbjct: 111 TIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVG 170
Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
           + GS EKV  +            K GFD  FNYK    L+  LK+  P+G D YF++VGG
Sbjct: 171 AVGSDEKVAYL-----------QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGG 219
Query: 247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMN-VVYKRIRMEGFVVFDYF-PQY 304
           +  + V+  M+  GRIA CG IS YN + P         V+Y+ +RME FVV+ +     
Sbjct: 220 EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDAR 279
Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
            + L  +L ++ EGK+ Y E + +G EN PAA +G+  G N+GK +V
Sbjct: 280 QKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 326

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score =  169 bits (427), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 165/328 (50%), Gaps = 35/328 (10%)
Query: 46  ILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLV 102
           + V+ LYLS DPYMR RM  N+D      TP      ++G G+  + +S H    KGD V
Sbjct: 45  VQVRTLYLSVDPYMRCRM--NEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFV 102
Query: 103 WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG--E 158
                  +  +I +   L K+     D  LSY+ G +GMPG+T+  G  E      G  +
Sbjct: 103 TSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNK 162
Query: 159 YIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF 217
            + VS A+GA G + GQ    +GC  VVG  G+ EK  L          L ++ GFD A 
Sbjct: 163 TMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCIL----------LTSELGFDAAI 212
Query: 218 NYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP- 276
           NYK++N  +   + C P G+D+YF++VGG + D V+  M  +  I  CG ISQYN   P 
Sbjct: 213 NYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPY 271
Query: 277 --------EGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVAD 328
                   E +    N+  +R     F+V +Y  ++   +  +  + +EGK+   E V +
Sbjct: 272 PPPLSPAIEAIQKERNITRER-----FLVLNYKDKFEPGILQLSQWFKEGKLKIKETVIN 326
Query: 329 GLENAPAALVGLFSGRNVGKQLVVVSRE 356
           GLEN  AA   + +G N+GKQ+V +S E
Sbjct: 327 GLENMGAAFQSMMTGGNIGKQIVCISEE 354

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score =  169 bits (427), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 165/328 (50%), Gaps = 35/328 (10%)
Query: 46  ILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLV 102
           + V+ LYLS DPYMR RM  N+D      TP      ++G G+  + +S H    KGD V
Sbjct: 40  VQVRTLYLSVDPYMRCRM--NEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFV 97
Query: 103 WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG--E 158
                  +  +I +   L K+     D  LSY+ G +GMPG+T+  G  E      G  +
Sbjct: 98  TSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNK 157
Query: 159 YIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF 217
            + VS A+GA G + GQ    +GC  VVG  G+ EK  L          L ++ GFD A 
Sbjct: 158 TMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCIL----------LTSELGFDAAI 207
Query: 218 NYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP- 276
           NYK++N  +   + C P G+D+YF++VGG + D V+  M  +  I  CG ISQYN   P 
Sbjct: 208 NYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPY 266
Query: 277 --------EGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVAD 328
                   E +    N+  +R     F+V +Y  ++   +  +  + +EGK+   E V +
Sbjct: 267 PPPLSPAIEAIQKERNITRER-----FLVLNYKDKFEPGILQLSQWFKEGKLKIKETVIN 321
Query: 329 GLENAPAALVGLFSGRNVGKQLVVVSRE 356
           GLEN  AA   + +G N+GKQ+V +S E
Sbjct: 322 GLENMGAAFQSMMTGGNIGKQIVCISEE 349

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 167/330 (50%), Gaps = 39/330 (11%)
Query: 46  ILVKNLYLSCDPYMRARMSFNQDPDF-SSFTPGSPIEGFGVAKVVDSGHPEFKKGDLV-- 102
           + V+ LYLS DPYMR +M+ +   D+ + +      +G G+  V +S H +  KGD V  
Sbjct: 41  VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTS 100
Query: 103 --WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG- 157
             W    W+  +++ +  GL K+     D  LSY+ G +GMPG+T+  G  E      G 
Sbjct: 101 FYWP---WQTKAIL-DGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGS 156
Query: 158 -EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD 215
            + + VS A+GA G L GQ   L+GC  VVG  G++EK             L ++ GFD 
Sbjct: 157 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLF----------LTSELGFDA 206
Query: 216 AFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYN--- 272
           A NYK  N +   L+   P G+D+YF++VGG + +AV+  M  +  I  CG ISQY+   
Sbjct: 207 AVNYKTGN-VAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDV 265
Query: 273 ------LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDV 326
                     E +    N+  +R     F V +Y  ++   +  +  + +EGK+   E +
Sbjct: 266 PYPPPLPPAVEAIRKERNITRER-----FTVLNYKDKFEPGILQLSQWFKEGKLKVKETM 320
Query: 327 ADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
           A GLEN   A   + +G NVGKQ+V +S +
Sbjct: 321 AKGLENMGVAFQSMMTGGNVGKQIVCISED 350

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 170/355 (47%), Gaps = 41/355 (11%)
Query: 21  GFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDF-SSFTPGSP 79
           G P   +  V+  S+   + EG   + V+ LYLS DPY R + + +   D+ + +     
Sbjct: 28  GNPVAENFRVEEFSLLDALNEGQ--VQVRTLYLSVDPYXRCKXNEDTGTDYLAPWQLAQV 85
Query: 80  IEGFGVAKVVDSGHPEFKKGDLV----WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYY 133
            +G G+  V +S H +  KGD V    W    W+  +++ +  GL K+     D  LSY+
Sbjct: 86  ADGGGIGIVEESKHQKLAKGDFVTSFYWP---WQTKAIL-DGNGLEKVDPQLVDGHLSYF 141
Query: 134 TGILGMPGMTAWAGFYEICAPKKG--EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGS 190
            G +G PG+T+  G  E      G  +   VS A+GA G L GQ   L+GC  VVG  G+
Sbjct: 142 LGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGT 201
Query: 191 REKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLD 250
           +EK             L ++ GFD A NYK  N +   L+   P G+D+YF++VGG + +
Sbjct: 202 QEKCLF----------LTSELGFDAAVNYKTGN-VAEQLREACPGGVDVYFDNVGGDISN 250
Query: 251 AVLLNMRLHGRIAACGMISQYN---------LSQPEGVHNLMNVVYKRIRMEGFVVFDYF 301
            V+     +  I  CG ISQYN             E +    N+  +R     F V +Y 
Sbjct: 251 TVISQXNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRER-----FTVLNYK 305
Query: 302 PQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
            ++   +  +  + +EGK+   E VA GLEN   A     +G NVGKQ+V +S +
Sbjct: 306 DKFEPGILQLSQWFKEGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQIVCISED 360

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQ 200
           G TA+    E+    +G+ + V+AA+G  GQ   Q +K   C+V+G+  S EK   +   
Sbjct: 127 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL--- 183
Query: 201 SQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHG 260
                      G D   NYK E  +   LK+ +PEG+D+ +E VGG M D  +  +   G
Sbjct: 184 --------KSLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKG 234
Query: 261 RIAACGMISQYNLSQPEGVHNL------MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 314
           R+   G IS Y    P G+  +        ++ K   ++GF +  Y  +Y   +  +L  
Sbjct: 235 RLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEM 292
Query: 315 IREGKVVYVEDVAD--------GLENAPAALVGLFSGRNVGKQLV 351
              G +V   D+ D        GLE+   A+  ++ G+N GK +V
Sbjct: 293 CVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 337

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQ 200
           G TA+    E+    +G+ + V+AA+G  GQ   Q +K   C+V+G+  S EK   +   
Sbjct: 148 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL--- 204
Query: 201 SQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHG 260
                      G D   NYK E  +   LK+ +PEG+D+ +E VGG M D  +  +   G
Sbjct: 205 --------KSLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKG 255
Query: 261 RIAACGMISQYNLSQPEGVHNL------MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 314
           R+   G IS Y    P G+  +        ++ K   ++GF +  Y  +Y   +  +L  
Sbjct: 256 RLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEM 313
Query: 315 IREGKVVYVEDVAD--------GLENAPAALVGLFSGRNVGKQLV 351
              G +V   D+ D        GLE+   A+  ++ G+N GK +V
Sbjct: 314 CVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQ 200
           G TA+    E+    +G+ + V+AA+G  GQ   Q +K   C+V+G+  S EK   +   
Sbjct: 156 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL--- 212
Query: 201 SQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHG 260
                      G D   NYK E  +   LK+ +PEG+D+ +E VGG M D  +  +   G
Sbjct: 213 --------KSLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKG 263
Query: 261 RIAACGMISQYNLSQPEGVHNL------MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 314
           R+   G IS Y    P G+  +        ++ K   ++GF +  Y  +Y   +  +L  
Sbjct: 264 RLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEM 321
Query: 315 IREGKVVYVEDVAD--------GLENAPAALVGLFSGRNVGKQLV 351
              G +V   D+ D        GLE+   A+  ++ G+N GK +V
Sbjct: 322 CVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 366

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 133/307 (43%), Gaps = 46/307 (14%)
Query: 44  NAILVKNLYLSCDP---YMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGD 100
           + +L+K      +P   Y+R+  ++++ P    +TPGS + G  V + V      FKKGD
Sbjct: 58  HQVLIKVHACGVNPVETYIRSG-TYSRKP-LLPYTPGSDVAG--VIEAVGDNASAFKKGD 113
Query: 101 LVWGTT----GWEEYSLIKNPQGLFKIHHTDVPLSYYTGI-LGMPGMTAWAGFYEICAPK 155
            V+ ++    G+ EY+L  +      ++     L +  G  +G+P  TA+         K
Sbjct: 114 RVFTSSTISGGYAEYALAAD----HTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVK 169
Query: 156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD 215
            GE + V  ASG VG    Q A+  G  ++G+AG+ E   ++         L+N  G  +
Sbjct: 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV---------LQN--GAHE 218
Query: 216 AFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQ 275
            FN++E N +D   K    +GIDI  E +    L   L  +   GR+   G      +  
Sbjct: 219 VFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEI-- 276
Query: 276 PEGVHNLMNVVYKRIRMEGFVVF----DYFPQYSRFLDAVL------PYIREGKVVYVED 325
                N  + + K   + G  +F    + F QY+  L A +      P I  G    +E 
Sbjct: 277 -----NPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVI--GSQYPLEK 329
Query: 326 VADGLEN 332
           VA+  EN
Sbjct: 330 VAEAHEN 336

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 23/257 (8%)
Query: 46  ILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLV--W 103
           +L+KN Y   + Y+ +       P    +  G    G  VAK    G   F+ GD V   
Sbjct: 38  LLIKNKYTGVN-YIESYFRKGIYPCEKPYVLGREASGTVVAK--GKGVTNFEVGDQVAYI 94
Query: 104 GTTGWEEYSLIKNPQGLFKIHH--TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIY 161
             + + +YS I +   + K+    +D  L  Y   L +  +TA +   E    KKG+Y+ 
Sbjct: 95  SNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGL-LQVLTALSFTNEAYHVKKGDYVL 153
Query: 162 VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE 221
           + AA+G VG ++ Q  K+ G + +  A + EK+            +  ++G +   N  +
Sbjct: 154 LFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-----------IAKEYGAEYLINASK 202
Query: 222 ENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHN 281
           E+ L   LK    +G+D  F+ VG    +  L  ++  G   + G  S   L  P  +  
Sbjct: 203 EDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS--GLIPPFSITR 260
Query: 282 L--MNVVYKRIRMEGFV 296
           L   N+   R ++ G++
Sbjct: 261 LSPKNITLVRPQLYGYI 277

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 30/211 (14%)
Query: 110 EYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAV 169
           E +L   P+ L       +PL++         +TAW    +    + G+ + V AA   V
Sbjct: 129 EANLAPKPKNLSFEEAAAIPLTF---------LTAWQMVVDKLGVRPGDDVLVMAAGSGV 179
Query: 170 GQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL 229
                Q AKL G  V+ +AGS +K+                 G D+  NY   +      
Sbjct: 180 SVAAIQIAKLFGARVIATAGSEDKLR-----------RAKALGADETVNYTHPDWPKEVR 228
Query: 230 KRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR 289
           +    +G D   +H G    + V+      GRIA  G  S Y     EG     +V Y++
Sbjct: 229 RLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQ 283
Query: 290 IRMEGFVVFDYFPQYSRFLDAVLPYIREGKV 320
           + + G          SR    +L ++ EGK+
Sbjct: 284 LSILG----STMASKSRLFP-ILRFVEEGKL 309

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQL 172
           LIK P+ L      D+   +  G++ + GMTA    ++    K G+Y+ + AA+G +G +
Sbjct: 109 LIKVPKDL------DLDDVHLAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHI 161
Query: 173 VGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC 232
           +  +A+ +G  V+G+  + EK                K G     NY  ++  +   +  
Sbjct: 162 MVPWARHLGATVIGTVSTEEKAE-----------TARKLGCHHTINYSTQDFAEVVREIT 210
Query: 233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMIS 269
             +G+D+ ++ +G   L   L  +R  G  AA G  S
Sbjct: 211 GGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 114/301 (37%), Gaps = 56/301 (18%)
Query: 59  MRARMSFNQDPDFS----SFTP---GSPIEGF---GVAKVVDSGHPEFKKGDLVWGTT-- 106
           +RA       PD +    S+ P    SPI G    G    V  G   +  GD V G    
Sbjct: 60  VRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLANG 119
Query: 107 -GWEEYSLIKN------PQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEY 159
             + EY L+        P+G   +    +P +++T          WA  ++     +GE 
Sbjct: 120 GAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFT---------VWANLFQXAGLTEGES 170
Query: 160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY 219
           + +   +  +G    Q A+  G  V  +AGS  K        +  E L  K G     NY
Sbjct: 171 VLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKC-------EACERLGAKRG----INY 219
Query: 220 KEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGV 279
           + E D  A +K    +G+DI  + +G    +  + ++   G ++   +I+    +  E V
Sbjct: 220 RSE-DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLS---IIAFLGGAVAEKV 275
Query: 280 HNLMNVVYKRIRMEGFVVFDYFPQYSR-----FLDAVLPYIREGKVVYV-------EDVA 327
            NL  +  KR+ + G        +  R      L  V P +  G V  V       EDVA
Sbjct: 276 -NLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVA 334
Query: 328 D 328
           D
Sbjct: 335 D 335

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQL 172
           L+  P+GL       +P ++         +TA+   + +   + G+Y+ + A    VG  
Sbjct: 128 LMPIPEGLTLTQAAAIPEAW---------LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTA 178
Query: 173 VGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC 232
             Q  ++ G   + +AGS++K+       Q+ E    K G    FNYK+E+  +A LK  
Sbjct: 179 AIQLTRMAGAIPLVTAGSQKKL-------QMAE----KLGAAAGFNYKKEDFSEATLKFT 227
Query: 233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP 276
              G+++  + +GG   +  +  + L GR    G++   +++ P
Sbjct: 228 KGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 271

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQL 172
           L+  P+GL       +P ++         +TA+   + +   + G+Y+ + A    VG  
Sbjct: 112 LMPIPEGLTLTQAAAIPEAW---------LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTA 162
Query: 173 VGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC 232
             Q  ++ G   + +AGS++K+       Q+ E    K G    FNYK+E+  +A LK  
Sbjct: 163 AIQLTRMAGAIPLVTAGSQKKL-------QMAE----KLGAAAGFNYKKEDFSEATLKFT 211
Query: 233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP 276
              G+++  + +GG   +  +  + L GR    G++   +++ P
Sbjct: 212 KGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 255

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 105/283 (37%), Gaps = 49/283 (17%)
Query: 40  EEGSNAILVKNLYLSCDPYMRARMSFNQDPDFS-SFTPGSPIEGFGVAKVVDSGHPEFKK 98
           E G + I+V+ L +S +   +  +      D +  F P S  +  GV + V      F+ 
Sbjct: 50  EAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPAS--DXSGVVEAVGKSVTRFRP 107
Query: 99  GDLVWGT--TGW-------------------------EEYSLIKNPQGLFKIHHTDVPLS 131
           GD V  T   GW                          EY ++  P+G F      +  +
Sbjct: 108 GDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVL--PEGWFVAAPKSLDAA 165
Query: 132 YYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR 191
             +  L   G+TAW    E    + G+ + V   +G V     Q AK  G  V+ ++ SR
Sbjct: 166 EAS-TLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSR 223
Query: 192 EKVWLIPMQSQLVELLKNKF--GFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKML 249
           EK             L   F  G D   N  EE+ ++         G D   E  GG  L
Sbjct: 224 EK-------------LDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGL 270
Query: 250 DAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRM 292
              L  +   GRI+  G++  + +S P G   L + V + I +
Sbjct: 271 GQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISV 313

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 142 MTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQS 201
           +TA+    ++   + GE + V +A+G VG    Q A+ +G  V  +A   E  W      
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATAS--EDKW------ 382
Query: 202 QLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGR 261
           Q VEL +         ++ E+  L A   R    G+D+    + G+  DA L  +   GR
Sbjct: 383 QAVELSREHLASSRTCDF-EQQFLGATGGR----GVDVVLNSLAGEFADASLRMLPRGGR 437
Query: 262 IAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV 321
               G   + ++  P  V +     +  +  + F   +  PQ    +   L  + EG+V+
Sbjct: 438 FLELG---KTDVRDPVEVAD----AHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVL 490
Query: 322 YVEDV-ADGLENAPAALVGLFSGRNVGK 348
               V A  +  AP AL  L   R+VGK
Sbjct: 491 EPLPVTAWDVRQAPEALRHLSQARHVGK 518

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 16/206 (7%)
Query: 155  KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD 214
            + GE + + + SG VGQ     A   GC V  + GS EK     +Q++  +L +  F   
Sbjct: 1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAY--LQARFPQLDETCFA-- 1721
Query: 215  DAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLS 274
               N ++ +     L+    +G+D+    +  + L A +  +  HGR    G   +++LS
Sbjct: 1722 ---NSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIG---KFDLS 1775
Query: 275  QPEGVHNLMNVVYKRIRMEGFVVFDYFPQ----YSRFLDAVLPYIREGKVVYVEDVADGL 330
                +   M V  K +   G ++   F +    +    + +   I+EG V  ++      
Sbjct: 1776 NNHALG--MAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPR 1833
Query: 331  ENAPAALVGLFSGRNVGKQLVVVSRE 356
                AA   +  G+++GK ++ V  E
Sbjct: 1834 TKVEAAFRYMAQGKHIGKVVIQVREE 1859

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 27/188 (14%)
Query: 102 VWGTT----GWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAP--- 154
           +WG      G  E +L+K+ Q + K  H    LS+       PG+     + ++ +    
Sbjct: 171 IWGFETNFGGLAEIALVKSNQLMPKPDH----LSWEEA--AAPGLVNSTAYRQLVSRNGA 224
Query: 155 --KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG 212
             K+G+ + +  ASG +G    QFA   G   +    S +K  +         + +N  G
Sbjct: 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEG 284
Query: 213 FDDAFNYKEENDLDAALKRCFP---------EGIDIYFEHVGGKMLDAVLLNMRLHGRIA 263
           +     +K+EN  D    + F          E IDI FEH G +   A +   R  G I 
Sbjct: 285 YR---FWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTIT 341
Query: 264 ACGMISQY 271
            C   S Y
Sbjct: 342 TCASTSGY 349

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 11/157 (7%)
Query: 42  GSNAILVKNLYLS---CDPYMRARMSFNQDPDFSSFTP-GSPIEGFGVAKVVDSGHPEFK 97
           G  A++V+N  +     D Y R+ +        + F P G   EG GV + V      FK
Sbjct: 27  GPQAVVVRNKAIGLNFIDTYYRSGLYP------APFLPSGLGAEGAGVVEAVGDEVTRFK 80
Query: 98  KGDLV-WGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKK 156
            GD V +GT     YS +        +   D         L + G+T      +    K 
Sbjct: 81  VGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKP 140
Query: 157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK 193
           GE I   AA+G VG L  Q+AK +G  ++G+  S EK
Sbjct: 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEK 177

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	356
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	0.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-178
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	1e-168
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	3e-96
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-28
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-28
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	3e-25
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	1e-24
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	6e-24
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-23
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	3e-23
3gms_A	340	Putative NADPH:quinone reductase; structural genom	5e-23
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-21
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-21
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	4e-21
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	9e-21
4eye_A	342	Probable oxidoreductase; structural genomics, niai	9e-21
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	5e-20
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	6e-20
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	2e-19
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	4e-19
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	3e-18
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	1e-17
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-17
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	3e-16
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	8e-16
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-14
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-13
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	5e-13
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	5e-12
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	3e-11
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	4e-11
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	4e-11
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	2e-10
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	5e-09
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	4e-07
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	2e-06
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	8e-06
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-05
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	7e-05
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	3e-04
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	4e-04

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score =  552 bits (1425), Expect = 0.0
 Identities = 239/352 (67%), Positives = 290/352 (82%), Gaps = 14/352 (3%)

Query: 9   SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
           +NKQVILK+YV GFP E+D     +++ L+V EG+N++LVKNLYLSCDPYMR RM     
Sbjct: 4   TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDP 63

Query: 69  PDFS---SFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNP-QGLFKIH 124
              +   ++TPG PI+G+GV+++++SGHP++KKGDL+WG   WEEYS+I       FKI 
Sbjct: 64  STAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQ 123

Query: 125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
           HTDVPLSYYTG+LGMPGMTA+AGFYE+C+PK+GE +YVSAASGAVGQLVGQ AK+MGCYV
Sbjct: 124 HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYV 183

Query: 185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV 244
           VGSAGS+EKV          +LLK KFGFDDAFNYKEE+DL AALKRCFP GIDIYFE+V
Sbjct: 184 VGSAGSKEKV----------DLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENV 233

Query: 245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
           GGKMLDAVL+NM +HGRIA CGMISQYNL   EGVHNL N++YKR R++GFVV D++ +Y
Sbjct: 234 GGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKY 293

Query: 305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
           S+FL+ VLP+IREGK+ YVEDVADGLE AP ALVGLF G+NVGKQ+VVV+RE
Sbjct: 294 SKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  495 bits (1278), Expect = e-178
 Identities = 133/348 (38%), Positives = 197/348 (56%), Gaps = 28/348 (8%)

Query: 9   SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
             K   LK + +G P ++D  +K   +       +  +L++ L+LS DPYMR        
Sbjct: 7   KAKSWTLKKHFQGKPTQSDFELKTVELP---PLKNGEVLLEALFLSVDPYMRIASK---- 59

Query: 69  PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI---HH 125
                   G+ + G  VA+VV+S +  F  G +V   +GW  + +  + +GL K+     
Sbjct: 60  ----RLKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFIS-DGKGLEKLLTEWP 114

Query: 126 TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVV 185
             +PLS   G +GMPG+TA+ G  E+C  K GE + VSAA+GAVG +VGQ AKL GC VV
Sbjct: 115 DKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVV 174

Query: 186 GSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG 245
           G+AGS EK          +  LK + GFD AFNYK  N L+ ALK+  P+G D YF++VG
Sbjct: 175 GAAGSDEK----------IAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 223

Query: 246 GKMLDAVLLNMRLHGRIAACGMISQYNLS-QPEGVHNLMNVVYKRIRMEGFVVFDYFPQ- 303
           G+ L+ VL  M+  G+IA CG IS YN   Q     +  +++YK++R+EGF+V+ +    
Sbjct: 224 GEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDV 283

Query: 304 YSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 351
             + L  ++ ++ EGK+ Y E V  G EN PAA + + +G N+GK +V
Sbjct: 284 REKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score =  472 bits (1216), Expect = e-168
 Identities = 115/368 (31%), Positives = 182/368 (49%), Gaps = 27/368 (7%)

Query: 2   AANSEVLSNKQVILKN--YVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYM 59
           AA +  +  ++V+L +     G P   +  ++   +   + EG   + V+ LYLS DPYM
Sbjct: 1   AAAAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ--VQVRTLYLSVDPYM 58

Query: 60  RARMSFNQDPDFS-SFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWG-TTGWEEYSLIKNP 117
           R RM+ +   D+   +     ++G G+  + +S H    KGD V      W+   ++ + 
Sbjct: 59  RCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVIL-DG 117

Query: 118 QGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG--EYIYVSAASGAVGQLV 173
             L K+     D  LSY+ G +GMPG+T+  G  E      G  + + VS A+GA G + 
Sbjct: 118 NSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVA 177

Query: 174 GQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC 232
           GQ    +GC  VVG  G+ EK            LL ++ GFD A NYK++ ++   L+  
Sbjct: 178 GQIGHFLGCSRVVGICGTHEKC----------ILLTSELGFDAAINYKKD-NVAEQLRES 226

Query: 233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGV----HNLMNVVYK 288
            P G+D+YF++VGG + D V+  M  +  I  CG ISQYN   P               +
Sbjct: 227 CPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKER 286

Query: 289 RIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGK 348
            I  E F+V +Y  ++   +  +  + +EGK+   E V +GLEN  AA   + +G N+GK
Sbjct: 287 NITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGK 346

Query: 349 QLVVVSRE 356
           Q+V +S E
Sbjct: 347 QIVCISEE 354

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  289 bits (742), Expect = 3e-96
 Identities = 85/369 (23%), Positives = 144/369 (39%), Gaps = 55/369 (14%)

Query: 9   SNKQVILKNYVEGFPKETDMLVKASSISLKVEE------GSNAILVKNLYLSCDP----Y 58
             +++++      F +                +      G   +LV+N ++  +     Y
Sbjct: 23  MMQKLVVTRLSPNFREAV----------TLSRDCPVPLPGDGDLLVRNRFVGVNASDINY 72

Query: 59  MRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTT--GWEEYSLIKN 116
              R   +  P    F  G    G  V  +  S    +  G  V       + EY+++  
Sbjct: 73  SAGRYDPSVKP---PFDIGFEGIG-EVVALGLSASARYTVGQAVAYMAPGSFAEYTVV-P 127

Query: 117 PQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQF 176
                 +         Y   L + G TA+    E+    +G+ + V+AA+G  GQ   Q 
Sbjct: 128 ASIATPV---PSVKPEYLT-LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQL 183

Query: 177 AKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG 236
           +K   C+V+G+  S EK             LK   G D   NYK E  +   LK+ +PEG
Sbjct: 184 SKKAKCHVIGTCSSDEK----------SAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEG 231

Query: 237 IDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYN----LSQPEGVHNLMNVVYKRIRM 292
           +D+ +E VGG M D  +  +   GR+   G IS Y     LS  +       ++ K   +
Sbjct: 232 VDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASV 291

Query: 293 EGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVAD--------GLENAPAALVGLFSGR 344
           +GF +  Y  +Y   +  +L     G +V   D+ D        GLE+   A+  ++ G+
Sbjct: 292 QGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGK 351

Query: 345 NVGKQLVVV 353
           N GK +V +
Sbjct: 352 NTGKIVVEL 360

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  113 bits (284), Expect = 1e-28
 Identities = 53/293 (18%), Positives = 106/293 (36%), Gaps = 32/293 (10%)

Query: 73  SFTPGSPIEGFGVAKVVDSGHPEFKKGDLV----WGTTGWEEYSLIKNPQGLFKIHHTDV 128
               G+  EG      V S     K GD V     G   W   ++  + + L ++     
Sbjct: 85  PAVGGN--EGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVF-SEEALIQV----- 136

Query: 129 P--LSYYTG-ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVV 185
           P  +   +   LG+   TA+    +    + G+ +  +A++  VGQ V Q A  +G   +
Sbjct: 137 PSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTI 196

Query: 186 GSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG 245
                R  +       +L + LK   G +     +E    +            +    VG
Sbjct: 197 NVVRDRPDI------QKLSDRLK-SLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVG 249

Query: 246 GKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYS 305
           GK    +L  +   G +   G ++     QP    ++  +++K +++ GF +  +   +S
Sbjct: 250 GKSSTELLRQLARGGTMVTYGGMA----KQPVVA-SVSLLIFKDLKLRGFWLSQWKKDHS 304

Query: 306 -----RFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
                  +  +   IR G++         L++  +AL          KQ++ +
Sbjct: 305 PDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 357

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  111 bits (281), Expect = 2e-28
 Identities = 53/296 (17%), Positives = 96/296 (32%), Gaps = 51/296 (17%)

Query: 73  SFTPGSPIEGFG-VAKVVDSGHPEFKKGDLVWGTT------GWEEY------SLIKNPQG 119
               G   EG G +    D  + +   G  V   T       W EY      + I     
Sbjct: 80  GRPAGF--EGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDT 137

Query: 120 LFKIHHTDVPLSYYTG-ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAK 178
           +              G  + +  +TA A F +I   +  +   ++A +  + +L+   AK
Sbjct: 138 V----------RDEDGAAMIVNPLTAIAMF-DIVKQEGEKAFVMTAGASQLCKLIIGLAK 186

Query: 179 LMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR-CFPEGI 237
             G   + +    E+          + LLK   G     N K   D +A L+     E  
Sbjct: 187 EEGFRPIVTVRRDEQ----------IALLK-DIGAAHVLNEKAP-DFEATLREVMKAEQP 234

Query: 238 DIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV 297
            I+ + V G +  A+   M    R    G +          +     ++++   +EGF +
Sbjct: 235 RIFLDAVTGPLASAIFNAMPKRARWIIYGRLD----PDATVIREPGQLIFQHKHIEGFWL 290

Query: 298 FDYFPQYS----RFLDAVLPYIREGKV-VYVEDVADGLENAPAALVGLFSGRNVGK 348
            ++  Q+       +        +G+    V  V   L  A A +      +  GK
Sbjct: 291 SEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVP-LAEAIAWVP-AELTKPNGK 344

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  103 bits (259), Expect = 3e-25
 Identities = 51/320 (15%), Positives = 101/320 (31%), Gaps = 41/320 (12%)

Query: 59  MRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLV----WGTTGWEEYSLI 114
            +   +        +   G+  EG      V S     + GD V         W  ++L 
Sbjct: 59  SKPAKTTGFGTTEPAAPCGN--EGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALG 116

Query: 115 KNPQGLFKIHHTDVPLSYYT--GI-------LGMPGMTAWAGFYEICAPKKGE-YIYVSA 164
            N     K+ +     +     G+       + +  +TA+           G+ +   + 
Sbjct: 117 -NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNG 175

Query: 165 ASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEND 224
            + AVG+   Q  KL+    +     R  +       ++V  LK + G        + N 
Sbjct: 176 GTSAVGKYASQIGKLLNFNSISVIRDRPNL------DEVVASLK-ELGATQVITEDQNNS 228

Query: 225 LD-----AALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGV 279
            +         +       +    VGGK    +   +  +G +   G +S     QP  +
Sbjct: 229 REFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMS----FQPVTI 284

Query: 280 HNLMNVVYKRIRMEGFVVFDYF----PQYSRFLDAVLPYIREGKVVYVEDVA---DGLEN 332
                 ++K     GF V +         +  L+ ++ +  EGK+   + +    DG + 
Sbjct: 285 -PTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKP 343

Query: 333 APAALVGLFSGRNVGKQLVV 352
                    +    GKQL+ 
Sbjct: 344 LHELYQDGVANSKDGKQLIT 363

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  101 bits (255), Expect = 1e-24
 Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 43/296 (14%)

Query: 76  PG-SPIEGFGVAKVVD---SGHPEFKKGDLVWGTT---GWEEY------SLIKNPQGLFK 122
              SPI G  ++  +     G   +  GD V G      + EY       ++  P+G   
Sbjct: 83  KDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDA 142

Query: 123 IHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
           +    +P ++          T WA  +++    +GE + +   +  +G    Q A+  G 
Sbjct: 143 VKAAALPETF---------FTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA 193

Query: 183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
            V  +AGS  K           E  + + G     NY+ E D  A +K    +G+DI  +
Sbjct: 194 EVYATAGSTGK----------CEACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDIILD 241

Query: 243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP 302
            +G    +  + ++   G ++    +     +  E V NL  ++ KR+ + G  +     
Sbjct: 242 MIGAAYFERNIASLAKDGCLSIIAFLGG---AVAEKV-NLSPIMVKRLTVTGSTMRPRTA 297

Query: 303 QY-----SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
           +         L  V P +  G V  V       E+   A   L  G +VGK ++ V
Sbjct: 298 EEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV 353

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =   99 bits (250), Expect = 6e-24
 Identities = 69/310 (22%), Positives = 104/310 (33%), Gaps = 54/310 (17%)

Query: 73  SFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSY 132
               G+  +G GV   V  G   F  GD V    G       +   G   +      L  
Sbjct: 58  PHVLGA--DGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE 115

Query: 133 YTG-------------ILGMP--------------GMTAWAGFYEICAPKKGEYIYVSAA 165
           +               +   P               +TAW    +    + G+ + V AA
Sbjct: 116 HRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAA 175

Query: 166 SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL 225
              V     Q AKL G  V+ +AGS +K+       +   L     G D+  NY   +  
Sbjct: 176 GSGVSVAAIQIAKLFGARVIATAGSEDKL------RRAKAL-----GADETVNYTHPDWP 224

Query: 226 DAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV 285
               +    +G D   +H G    + V+      GRIA  G       S  EG     +V
Sbjct: 225 KEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGA-----SSGYEGTLPFAHV 279

Query: 286 VYKRIRMEGFVVFDYFPQYSR-FLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGR 344
            Y+++ + G  +       S+  L  +L ++ EGK+  V      LE A      L   R
Sbjct: 280 FYRQLSILGSTMA------SKSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERR 333

Query: 345 NVGKQLVVVS 354
             GK  VV+ 
Sbjct: 334 VFGK--VVLQ 341

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 98.4 bits (246), Expect = 2e-23
 Identities = 68/291 (23%), Positives = 118/291 (40%), Gaps = 37/291 (12%)

Query: 73  SFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWE----EYSLIKNPQGLFKIHHTDV 128
            +TPGS  +  GV + V      FKKGD V+ ++       EY+L  +   ++K+     
Sbjct: 88  PYTPGS--DVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHT-VYKL----- 139

Query: 129 P--LSYYTG-ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVV 185
           P  L +  G  +G+P  TA+         K GE + V  ASG VG    Q A+  G  ++
Sbjct: 140 PEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKIL 199

Query: 186 GSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG 245
           G+AG+ E            +++  + G  + FN++E N +D   K    +GIDI  E + 
Sbjct: 200 GTAGTEEG----------QKIVL-QNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA 248

Query: 246 GKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY- 304
              L   L  +   GR+   G      +       N  + + K   + G  +F    +  
Sbjct: 249 NVNLSKDLSLLSHGGRVIVVGSRGTIEI-------NPRDTMAKESSIIGVTLFSSTKEEF 301

Query: 305 SRFLDAVLPYIREGKV-VYVEDVADGLENAPAAL-VGLFSGRNVGKQLVVV 353
            ++  A+   +  G +   +      LE    A    +      GK ++++
Sbjct: 302 QQYAAALQAGMEIGWLKPVIGSQYP-LEKVAEAHENIIHGSGATGKMILLL 351

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 97.7 bits (244), Expect = 3e-23
 Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 26/289 (8%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV-WGTTG-WEEYSLIKNPQGLFKI--HHTDVP 129
           +  G   E  G       G   F+ GD V + +   + +YS I +   + K+    +D  
Sbjct: 65  YVLGR--EASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEE 122

Query: 130 LSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG 189
           L  Y   L +  +TA +   E    KKG+Y+ + AA+G VG ++ Q  K+ G + +  A 
Sbjct: 123 LKLYAAGL-LQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS 181

Query: 190 SREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKML 249
           + EK          +++ K ++G +   N  +E+ L   LK    +G+D  F+ VG    
Sbjct: 182 TDEK----------LKIAK-EYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTF 230

Query: 250 DAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYF---PQYSR 306
           +  L  ++  G   + G     N S      ++  +  K I +    ++ Y     ++  
Sbjct: 231 EISLAALKRKGVFVSFG-----NASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKY 285

Query: 307 FLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR 355
           + D     +   K+         L +   A   + S + VGK ++ + +
Sbjct: 286 YSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ 334

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 96.9 bits (242), Expect = 5e-23
 Identities = 45/301 (14%), Positives = 98/301 (32%), Gaps = 50/301 (16%)

Query: 73  SFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTT---GWEEY------SLIKNPQGLFKI 123
              PG   EG G+ + V +       G  V        W+EY       ++  P  +   
Sbjct: 63  PNIPGY--EGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSI--- 117

Query: 124 HHTDVPLSYYTG-ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
                    +T   + +  +TAW    E    ++ + + V+A   A+G L  Q ++++  
Sbjct: 118 -------DDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF 170

Query: 183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR-CFPEGIDIYF 241
            ++    + +            E L  + G     +      L   +       G D   
Sbjct: 171 RLIAVTRNNKH----------TEELL-RLGAAYVIDTSTA-PLYETVMELTNGIGADAAI 218

Query: 242 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYF 301
           + +GG   + +  ++R +G     G      LS  +     +     ++    F +  + 
Sbjct: 219 DSIGGPDGNELAFSLRPNGHFLTIG-----LLSGIQVNWAEIVTK-AKVHANIFHLRHWN 272

Query: 302 PQYSR-----FLDAVLPYIREGKV--VYVEDVADGLENAPAALVGLFSGR-NVGKQLVVV 353
            + S          ++  +   ++  + V    + L +  AA+  + S     GK  +  
Sbjct: 273 DEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYE-LADVKAAVDVVQSAEKTKGKVFLTS 331

Query: 354 S 354
            
Sbjct: 332 Y 332

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 56/322 (17%), Positives = 106/322 (32%), Gaps = 51/322 (15%)

Query: 61  ARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTT---GWEEY------ 111
            R     +P  +   PG   E  G+ + +      ++ GD V        W E       
Sbjct: 49  VRQGNIDNPPKTPLVPGF--ECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVE 106

Query: 112 SLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQ 171
            + K P  +        P+++         +TA+   +E+   ++G  + V +A G VGQ
Sbjct: 107 FVYKIPDDMSFSEAAAFPMNF---------VTAYVMLFEVANLREGMSVLVHSAGGGVGQ 157

Query: 172 LVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR 231
            V Q    +    V    S  K           E +K+       F+     D    +KR
Sbjct: 158 AVAQLCSTVPNVTVFGTASTFK----------HEAIKD--SVTHLFDRNA--DYVQEVKR 203

Query: 232 CFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVH----------- 280
              EG+DI  + + G      L  ++  G     G  +                      
Sbjct: 204 ISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKV 263

Query: 281 NLMNVVYKRIRMEGFVVFDYFPQ------YSRFLDAVLPYIREGKVVYVEDVADGLENAP 334
           N + +  +   + GF + +   +          ++ ++    + K+  V D    LE   
Sbjct: 264 NPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVK 323

Query: 335 AALVGLFSGRNVGKQLVVVSRE 356
            A+  +    N+GK ++ V + 
Sbjct: 324 EAMQRIHDRGNIGKLILDVEKT 345

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 58/301 (19%), Positives = 120/301 (39%), Gaps = 44/301 (14%)

Query: 73  SFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTT---GWEEY------SLIKNPQGLFKI 123
           S   G    G  VA++       +K GD         G  +Y       L+  P+GL   
Sbjct: 80  SNILGLEASG-HVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLT 138

Query: 124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
               +P ++         +TA+   + +   + G+Y+ + A    VG    Q  ++ G  
Sbjct: 139 QAAAIPEAW---------LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAI 189

Query: 184 VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEH 243
            + +AGS++K          +++ + K G    FNYK+E+  +A LK     G+++  + 
Sbjct: 190 PLVTAGSQKK----------LQMAE-KLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDC 238

Query: 244 VGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV-YKRIRMEGFVVFDYFP 302
           +GG   +  +  + L GR    G+     +   +    L + + +KR  +   ++     
Sbjct: 239 IGGSYWEKNVNCLALDGRWVLYGL-----MGGGDINGPLFSKLLFKRGSLITSLLRSRDN 293

Query: 303 QY-----SRFLDAVLPYIREGKVVYVEDVADG---LENAPAALVGLFSGRNVGKQLVVVS 354
           +Y     + F + +LP+        +  V D    +     A   + + +N+GK ++ + 
Sbjct: 294 KYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP 353

Query: 355 R 355
           +
Sbjct: 354 Q 354

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 91.5 bits (228), Expect = 4e-21
 Identities = 66/336 (19%), Positives = 123/336 (36%), Gaps = 49/336 (14%)

Query: 37  LKVEE------GSNAILVKNLYLSC---DPYMRARMSFNQDPDFSSFTPGSPIEGFGVAK 87
              EE      G   + ++N  +     D Y RA +             G   E   V +
Sbjct: 16  FVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGF--EAAAVVE 73

Query: 88  VVDSGHPEFKKGDLV-WGTTGWEEYS---------LIKNPQGLFKIHHTDVPLSYYTGIL 137
            V  G  +F  G+ V         YS         LIK P+ L      D+   +  G++
Sbjct: 74  EVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDL------DLDDVHLAGLM 127

Query: 138 GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLI 197
            + GMTA    ++    K G+Y+ + AA+G +G ++  +A+ +G  V+G+  + EK    
Sbjct: 128 -LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEK---- 182

Query: 198 PMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMR 257
                  E  + K G     NY  ++  +   +    +G+D+ ++ +G   L   L  +R
Sbjct: 183 ------AETAR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLR 235

Query: 258 LHGRIAACGMISQYNLSQPEGVHNLMNVVYKR--IRMEGFVVFDYF---PQYSRFLDAVL 312
             G  AA G     + S       ++  +  R  + +    ++ Y     +       + 
Sbjct: 236 PRGMCAAYG-----HASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLF 290

Query: 313 PYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGK 348
             ++ G +         L  A AA   +   + +G 
Sbjct: 291 DAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGS 326

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 91.8 bits (228), Expect = 9e-21
 Identities = 47/236 (19%), Positives = 70/236 (29%), Gaps = 40/236 (16%)

Query: 137 LGMPGMTAW-AGFYEICAP-KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV 194
             +   TA+     +  A  K+G+ + +  ASG +G    QF K  G   V    S +K 
Sbjct: 199 SPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQK- 257

Query: 195 WLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP-----------------EGI 237
                       ++   G D   N  E    D                            
Sbjct: 258 ---------EAAVR-ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREP 307

Query: 238 DIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV 297
           DI FEH G       ++  R  G +  CG  S Y  +          +  K  ++ G   
Sbjct: 308 DIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYLHTFD-----NRYLWMKLKKIVGSHG 362

Query: 298 FDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
            ++         A       G VV        L  A  A   + + R VGK  V+ 
Sbjct: 363 ANH-----EEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLC 413

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 90.7 bits (226), Expect = 9e-21
 Identities = 59/295 (20%), Positives = 93/295 (31%), Gaps = 47/295 (15%)

Query: 73  SFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTT---GWEEYSLIKNPQGLFKIHHTDVP 129
            F PG   E  GV +    G    K GD V       G+ E   +  P  +        P
Sbjct: 79  PFVPGI--ETAGVVRSAPEG-SGIKPGDRVMAFNFIGGYAERVAV-APSNILPT-----P 129

Query: 130 --LSYYTG-ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
             L       L     T +  +      + GE + V  A+G +G    Q AK MG  V+ 
Sbjct: 130 PQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIA 189

Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR-CFPEGIDIYFEHVG 245
                             E +K   G D     +E      A++      G+D+  + +G
Sbjct: 190 VVNRTAA----------TEFVK-SVGADIVLPLEE--GWAKAVREATGGAGVDMVVDPIG 236

Query: 246 GKMLDAVLLNMRLHGRI----AACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY- 300
           G   D  +  +   GR+     A G I    +       N + +  +   + G    ++ 
Sbjct: 237 GPAFDDAVRTLASEGRLLVVGFAAGGIPTIKV-------NRLLL--RNASLIGVAWGEFL 287

Query: 301 --FPQY-SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV 352
                Y       +   + EG    V      L     AL     G+  GK ++V
Sbjct: 288 RTHADYLYETQAGLEKLVAEGMRPPVSARI-PLSEGRQALQDFADGKVYGKMVLV 341

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 89.9 bits (223), Expect = 5e-20
 Identities = 45/236 (19%), Positives = 71/236 (30%), Gaps = 40/236 (16%)

Query: 137 LGMPGMTAWAGFYEIC--APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV 194
            G+   TA+           K+G+ + +  ASG +G    QFA   G   +    S +K 
Sbjct: 207 PGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQK- 265

Query: 195 WLIPMQSQLVELLKNKFGFDDAFNYKEENDL-----------------DAALKRCFPEGI 237
                     E+ +   G +   +   E                        +    E I
Sbjct: 266 ---------AEICR-AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDI 315

Query: 238 DIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV 297
           DI FEH G +   A +   R  G I  C   S Y             +     R+ G   
Sbjct: 316 DIVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHEYD-----NRYLWMSLKRIIGSHF 370

Query: 298 FDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
            +Y     R        I +G++         LE+   A   +    + GK  V+ 
Sbjct: 371 ANY-----REAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLC 421

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 88.8 bits (221), Expect = 6e-20
 Identities = 68/306 (22%), Positives = 99/306 (32%), Gaps = 53/306 (17%)

Query: 73  SFTPGSPIEGFGVAKVVDSGHPEFKKGDLV-------WGTTGWEEYSLIKNPQGLFKIHH 125
            F P S  +  GV + V      F+ GD V       W              + L   H 
Sbjct: 84  PFVPAS--DMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHP 141

Query: 126 --------------TDVP--LSYYT-GILGMPGMTAWAGFYEICAPKKGEYIYVSAASGA 168
                            P  L       L   G+TAW    E    + G+ + V    G 
Sbjct: 142 GVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGG- 200

Query: 169 VGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA 228
           V     Q AK  G  V+ ++ SREK+          +      G D   N  EE+ ++  
Sbjct: 201 VALFGLQIAKATGAEVIVTSSSREKL----------DRAF-ALGADHGINRLEEDWVERV 249

Query: 229 LKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYK 288
                  G D   E  GG  L   L  +   GRI+  G+     L   E    +  ++ K
Sbjct: 250 YALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGV-----LEGFEVSGPVGPLLLK 304

Query: 289 RIRMEGFVVFDYFPQYSR-FLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVG 347
              ++G  V        R  L+ ++  +    +  V D+       P AL  L  G   G
Sbjct: 305 SPVVQGISVG------HRRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRG-PFG 357

Query: 348 KQLVVV 353
           K  VV+
Sbjct: 358 K--VVI 361

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 86.9 bits (216), Expect = 2e-19
 Identities = 62/288 (21%), Positives = 100/288 (34%), Gaps = 39/288 (13%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV-WGTTGWEEYS---------LIKNPQGLFKI 123
              G+  EG GV + V      FK GD V +GT     YS         L+K        
Sbjct: 59  SGLGA--EGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADS---- 112

Query: 124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
               V       ++ + G+T      +    K GE I   AA+G VG L  Q+AK +G  
Sbjct: 113 ----VSFEQAAALM-LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAK 167

Query: 184 VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEH 243
           ++G+  S EK              K   G  +  +Y  E+     L+    +   + ++ 
Sbjct: 168 LIGTVSSPEK----------AAHAK-ALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDG 216

Query: 244 VGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYF-- 301
           VG       L ++   G + + G  S        G+    + VY    +    +  Y   
Sbjct: 217 VGQDTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVY----VTRPTLGSYANN 272

Query: 302 -PQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGK 348
                   D +   +  GK+         L++A  A + L + R  G 
Sbjct: 273 AQNLQTMADELFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGS 320

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 85.7 bits (213), Expect = 4e-19
 Identities = 41/206 (19%), Positives = 75/206 (36%), Gaps = 32/206 (15%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV-WGTTGWEEYS---------LIKNPQGLFKI 123
              G+  E  G+   V SG    K GD V +  +    YS             P      
Sbjct: 59  SGLGT--EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAA---- 112

Query: 124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
               +          + G+T +    +    K  E     AA+G VG +  Q+AK +G  
Sbjct: 113 ----ISFEQAAASF-LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK 167

Query: 184 VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEH 243
           ++G+ G+ +K           +    K G     NY+EE+ ++   +    + + + ++ 
Sbjct: 168 LIGTVGTAQK----------AQSAL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDS 216

Query: 244 VGGKMLDAVLLNMRLHGRIAACGMIS 269
           VG    +  L  ++  G + + G  S
Sbjct: 217 VGRDTWERSLDCLQRRGLMVSFGNSS 242

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 84.0 bits (208), Expect = 3e-18
 Identities = 49/357 (13%), Positives = 101/357 (28%), Gaps = 79/357 (22%)

Query: 42  GSNAILVKNLYLS---CDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVD---SGHPE 95
             + + V+   ++    D  MR +            TP     G   A  V    S    
Sbjct: 35  PRDQVYVRVEAVAINPSDTSMRGQF----------ATPW-AFLGTDYAGTVVAVGSDVTH 83

Query: 96  FKKGDLVWGTT-----------GWEEYSLIKNPQGLFKIHHTDVP--LSYYTG-ILGMPG 141
            + GD V+G              + +Y++ +  +   KI     P  LS+     L    
Sbjct: 84  IQVGDRVYGAQNEMCPRTPDQGAFSQYTVTR-GRVWAKI-----PKGLSFEQAAALPAGI 137

Query: 142 MTAWAGFYEI------------CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG 189
            TA      +                K  Y+ V   S A   +  Q  +L G   + +  
Sbjct: 138 STAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCS 197

Query: 190 SREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG--- 246
                          +L K   G ++ F+Y+   +L   ++      +    + +     
Sbjct: 198 PHNF-----------DLAK-SRGAEEVFDYRAP-NLAQTIRTYTKNNLRYALDCITNVES 244

Query: 247 -KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVY----KRIRMEGFVVFDYF 301
                A +   R  G   +     ++  +  + V     +      +             
Sbjct: 245 TTFCFAAIG--RAGGHYVSLNPFPEHAAT-RKMVTTDWTLGPTIFGEGSTWPAPYGRPGS 301

Query: 302 PQY----SRFLDAVLPYIREGKV--VYVEDVADGLENAPAALVGLFSGRNVGKQLVV 352
            +               + +G++    +  V  G ++    +  +  G   G++LVV
Sbjct: 302 EEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVV 358

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 81.9 bits (203), Expect = 1e-17
 Identities = 51/306 (16%), Positives = 99/306 (32%), Gaps = 51/306 (16%)

Query: 69  PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWE--------EY------SLI 114
                   G   +  G    V      F+ GD V+G TG          ++       L 
Sbjct: 60  QQPLPAILGM--DLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLA 117

Query: 115 KNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVG 174
             P  L     + +PL           +TAW G  +    + G+ + +    G VG +  
Sbjct: 118 SKPAALTMRQASVLPLV---------FITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAI 168

Query: 175 QFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP 234
           Q A   G  V  +A   +           +E ++   G       +E  D  A       
Sbjct: 169 QIALARGARVFATARGSD-----------LEYVR-DLGATPIDASREPEDYAAEHTA--G 214

Query: 235 EGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEG 294
           +G D+ ++ +GG +LDA    ++  G + +C     + L+            Y  +    
Sbjct: 215 QGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWGTHKLAPLSFK----QATYSGVFTLH 270

Query: 295 FVVFDYFPQYSR-FLDAVLPYIREGKV-VYVEDVADGLENAPAALVGLF----SGRNVGK 348
            ++ +    +    L      ++ GK+   ++     +    +A   +       R  GK
Sbjct: 271 TLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGK 330

Query: 349 QLVVVS 354
             + ++
Sbjct: 331 --IAIT 334

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 80.7 bits (200), Expect = 2e-17
 Identities = 68/351 (19%), Positives = 115/351 (32%), Gaps = 81/351 (23%)

Query: 23  PKETDMLVK--ASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPI 80
            ++  ML+K  A+S+        N I         D   R    F      ++  P    
Sbjct: 31  YRKNQMLIKVHAASL--------NPI---------DYKTRNGSGFVAKKLKNNL-PSGL- 71

Query: 81  EGFGVAKVVD---SGHPEFKKGDLVWGTTGWE-------EY------SLIKNPQGLFKIH 124
            G+  +  V    S       GD V G  G+        EY      ++I+  + L  + 
Sbjct: 72  -GYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQ 130

Query: 125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
              +P +         G+TA          K+G+ + + A +G VG L  Q AK  G  V
Sbjct: 131 AASLPTA---------GLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTV 180

Query: 185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHV 244
           + +A  R               LK   G +   NY EE+ L A         +D   + V
Sbjct: 181 ITTASKRN-----------HAFLK-ALGAEQCINYHEEDFLLAI-----STPVDAVIDLV 223

Query: 245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
           GG +    +  ++  G I +   +      +   V    +     +  +           
Sbjct: 224 GGDVGIQSIDCLKETGCIVS---VPTITAGRVIEVAKQKHRRAFGLLKQ---------FN 271

Query: 305 SRFLDAVLPYIREGKV-VYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS 354
              L  +   + E K+ + +  +   L  A  A   L +G   GK  +V  
Sbjct: 272 IEELHYLGKLVSEDKLRIEISRIFQ-LSEAVTAHELLETGHVRGK--LVFK 319

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 78.0 bits (192), Expect = 3e-16
 Identities = 45/266 (16%), Positives = 77/266 (28%), Gaps = 44/266 (16%)

Query: 61  ARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYS-------- 112
             M        +S   G+  EG GV     S               G   YS        
Sbjct: 79  GAMRSMAGRLDASMPVGN--EGAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPAD 136

Query: 113 -LIKNPQGLFKIHHTDVPLSYYTGI-LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVG 170
             +  P+G           +   G    +  +TA  G  E    +    +  +AA+  +G
Sbjct: 137 QCLVLPEGA----------TPADGASSFVNPLTAL-GMVETMRLEGHSALVHTAAASNLG 185

Query: 171 QLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALK 230
           Q++ Q     G  +V     +E+           +LLK   G     N      +    +
Sbjct: 186 QMLNQICLKDGIKLVNIVRKQEQ----------ADLLK-AQGAVHVCNAASPTFMQDLTE 234

Query: 231 RCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVH---------- 280
                G  I F+  GG  L   +L         +    S+Y  +  + V+          
Sbjct: 235 ALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPT 294

Query: 281 NLMNVVYKRIRMEGFVVFDYFPQYSR 306
                      M G+++F +  +  R
Sbjct: 295 EFNRNFGMAWGMGGWLLFPFLQKIGR 320

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 76.7 bits (189), Expect = 8e-16
 Identities = 61/362 (16%), Positives = 109/362 (30%), Gaps = 68/362 (18%)

Query: 24  KETDMLVK--ASSIS---LKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGS 78
              +++VK  A+S++   + +  G  A  +           R  +      +    T G 
Sbjct: 49  YPNEVIVKVHAASVNPIDVNMRSGYGATAL--------NMKRDPLHVKIKGEEFPLTLGR 100

Query: 79  PIEGFGVAKVVDSGHPEFKKGDLVWGTTGWE------EY------SLIKNPQGLFKIHHT 126
             +  GV          FK GD VW            E+       +   P+ L      
Sbjct: 101 --DVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAA 158

Query: 127 DVPLSYYTGILGMPGMTAWAGFYEI----CAPKKGEYIYVSAASGAVGQLVGQFAKLMGC 182
            +P            +TAW+   ++         G+ + +  ASG VG    Q  K    
Sbjct: 159 SLPYV---------ALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA 209

Query: 183 YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 242
           +V                    EL++ K G DD  +YK    ++  LK    +  D   +
Sbjct: 210 HVTAVCSQDA-----------SELVR-KLGADDVIDYKSG-SVEEQLKS--LKPFDFILD 254

Query: 243 HVGGKMLDAVLLNMRL--HGRIAACGMISQYNLSQPEGVHNLMNVVY-------KRIRME 293
           +VGG         ++                N+ +      ++           K     
Sbjct: 255 NVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKG 314

Query: 294 GFVVFDYFPQYSRFLDAVLPYIREGKV-VYVEDVADGLENAPAALVGLFSGRNVGKQLVV 352
               + +F      LD +   +  GK+   +E         P A + +  G   GK   V
Sbjct: 315 VHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFP-FSKVPEAFLKVERGHARGK--TV 371

Query: 353 VS 354
           ++
Sbjct: 372 IN 373

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 77/368 (20%), Positives = 124/368 (33%), Gaps = 97/368 (26%)

Query: 23  PKETDMLVK--ASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSP- 79
           PK  ++LVK  + S+        N +         D   R                 +P 
Sbjct: 30  PKVHEILVKIQSISV--------NPV---------DTKQRLMD-----------VSKAPR 61

Query: 80  IEGFGVAKVVD---SGHPEFKKGDLVWGTTGWE------EYSLI------KNPQGLFKIH 124
           + GF    VV+   +    F +GD+V+ +   +      EY LI      K P+ +    
Sbjct: 62  VLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQ 121

Query: 125 HTDVPLSYYTGILGMPGMTAW------AGFYEICAPKKGEYIYVSAASGAVGQLVGQFAK 178
              +PL   TGI      TA+       G        +G+ + +   +G VG +  Q AK
Sbjct: 122 AVSLPL---TGI------TAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAK 172

Query: 179 LMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID 238
             G  V+ +A   E           +E  K K G D   N+KE   L    K    E +D
Sbjct: 173 AYGLRVITTASRNET----------IEWTK-KMGADIVLNHKE--SLLNQFKTQGIELVD 219

Query: 239 IYFEHVGGKM-LDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV 297
             F      M  D ++  ++  G IA             E   +L  +  K +      +
Sbjct: 220 YVFCTFNTDMYYDDMIQLVKPRGHIATI--------VAFENDQDLNALKPKSLSFSHEFM 271

Query: 298 F--------DYFPQYSRFLDAVLPYIREGKV-VYVEDVADG--LENAPAALVGLFSGRNV 346
           F        D       +L+ +   + +         V +G   EN   A   L S   +
Sbjct: 272 FARPLNQTDDMIKH-HEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMI 330

Query: 347 GKQLVVVS 354
           GK  +V++
Sbjct: 331 GK--LVIN 336

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 69.9 bits (172), Expect = 1e-13
 Identities = 41/288 (14%), Positives = 80/288 (27%), Gaps = 58/288 (20%)

Query: 84  GVAKVVDSGHPEFKKGDLVWGTTGWE------EYSLI------KNPQGLFKIHHTD---- 127
           GV   V +       G  V   T  +      E++++        P  L     +     
Sbjct: 68  GVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNL-----SFERAA 122

Query: 128 -VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
            +P          P +TAW  F E     K   + +    GAV  L+ Q     G  V  
Sbjct: 123 ALPC---------PLLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDL 171

Query: 187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 246
            + S  +                K G    +    +            +     F+ V  
Sbjct: 172 VSASLSQALA------------AKRGVRHLYREPSQV----------TQKYFAIFDAVNS 209

Query: 247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSR 306
           +   A++ +++ +G I          +          + +      +     D+     +
Sbjct: 210 QNAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQ 269

Query: 307 FLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS 354
             +A+L  I +GK+          E    AL      +      + ++
Sbjct: 270 -GEALLTLIAQGKMEIAAPDIFRFEQMIEALDHSEQTKLKTV--LTLN 314

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 67.6 bits (166), Expect = 5e-13
 Identities = 48/220 (21%), Positives = 82/220 (37%), Gaps = 27/220 (12%)

Query: 137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWL 196
             +  +TA+    +    + GE + V AA+GA+G    Q A+ MG  V+ +A   EK+  
Sbjct: 107 FPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL-- 163

Query: 197 IPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNM 256
                 L   L    G ++A  Y E        K     G+D+  E V GK ++  L  +
Sbjct: 164 -----ALPLAL----GAEEAATYAEV---PERAKA--WGGLDLVLE-VRGKEVEESLGLL 208

Query: 257 RLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV--FDYFPQYSR-FLDAVLP 313
              GR+   G                + ++ + + + GF +             L  +LP
Sbjct: 209 AHGGRLVYIGAAEG---EVAPI--PPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLP 263

Query: 314 YIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 353
            +   ++  V         A AA   L    + GK +V +
Sbjct: 264 RL-GRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 65.0 bits (159), Expect = 5e-12
 Identities = 55/219 (25%), Positives = 80/219 (36%), Gaps = 58/219 (26%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV-----------WGTTGWEEYS------LIKN 116
           F PG  I+  GV  VV S HP F++GD V           +G  G+ EY+      L+  
Sbjct: 62  FVPG--IDLAGV--VVSSQHPRFREGDEVIATGYEIGVTHFG--GYSEYARLHGEWLVPL 115

Query: 117 PQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI---CAPKKGEYIYVSAASGAVGQLV 173
           P+GL                +G  G TA    + +       +   + V+ A+G VG L 
Sbjct: 116 PKGL---------TLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLA 166

Query: 174 GQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA----- 228
                  G  V  S G   +           + L+   G   A       D+ A      
Sbjct: 167 VSMLAKRGYTVEASTGKAAE----------HDYLR-VLG---AKEVLAREDVMAERIRPL 212

Query: 229 LKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGM 267
            K+ +   +D     VGG+ L  VL  MR  G +A  G+
Sbjct: 213 DKQRWAAAVDP----VGGRTLATVLSRMRYGGAVAVSGL 247

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 55/312 (17%), Positives = 105/312 (33%), Gaps = 62/312 (19%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV-----WG-------TTGWE------------ 109
            T G   E  G  + V      + KGDLV      G         G E            
Sbjct: 64  VTLGH--EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121

Query: 110 ------EYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVS 163
                 EY ++ + + ++K+   +   +     L   G+T +    +  +    + + V 
Sbjct: 122 FDGAYAEYVIVPHYKYMYKLRRLN---AVEAAPLTCSGITTYRAVRKA-SLDPTKTLLVV 177

Query: 164 AASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE 222
            A G +G +  Q AK +    ++G     E           VE  K + G D   N   +
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEA----------VEAAK-RAGADYVINASMQ 226

Query: 223 NDLDAALKRCFPEGIDIYFEHVG-GKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHN 281
           + L    +    +G+D   +     K L      +   G+    G      L   +  ++
Sbjct: 227 DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVG------LFGADLHYH 280

Query: 282 LMNVVYKRIRMEGFVVFDYFPQYSRF-LDAVLPYIREGKVVYVEDVADGLENAPAALVGL 340
              +    I+  G +V       ++     ++     GKV  +      LE A  A+  L
Sbjct: 281 APLITLSEIQFVGSLV------GNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNL 334

Query: 341 FSGRNVGKQLVV 352
            + + +G+Q+++
Sbjct: 335 ENFKAIGRQVLI 346

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 62.3 bits (152), Expect = 4e-11
 Identities = 56/221 (25%), Positives = 74/221 (33%), Gaps = 52/221 (23%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV-----------WGTTGWEEYS------LIKN 116
             PG  I+  G   V  S  P F  G  V           WG  G  E +      L+  
Sbjct: 59  MIPG--IDFAGT--VHASEDPRFHAGQEVLLTGWGVGENHWG--GLAERARVKGDWLVAL 112

Query: 117 PQGLFKIHHTDVPLSYYTGILGMPGMTA----WAGFYEICAPKKGEYIYVSAASGAVGQL 172
           P GL          S    I+G  G TA     A       P+ G  + V+ ASG VG  
Sbjct: 113 PAGL---------SSRNAMIIGTAGFTAMLCVMALEDAGIRPQDG-EVVVTGASGGVGST 162

Query: 173 VGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC 232
                  +G  V   +G                 LK   G +   +  E  +     K+ 
Sbjct: 163 AVALLHKLGYQVAAVSGRESTH----------GYLK-SLGANRILSRDEFAESRPLEKQL 211

Query: 233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNL 273
           +   ID     VG K+L  VL  M   G +AACG+   + L
Sbjct: 212 WAGAIDT----VGDKVLAKVLAQMNYGGCVAACGLAGGFAL 248

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 62.3 bits (152), Expect = 4e-11
 Identities = 61/355 (17%), Positives = 110/355 (30%), Gaps = 72/355 (20%)

Query: 23  PKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEG 82
           P   D+LV+  ++S+      N +         D  +R     +             + G
Sbjct: 50  PAGHDILVEVKAVSV------NPV---------DYKVRRSTPPDGTD------W--KVIG 86

Query: 83  FGVAKVVD---SGHPEFKKGDLVWGTTGWE------EYSLI------KNPQGLFKIHHTD 127
           +  A +V         F+ GD V+            E+ L+      + P+ L       
Sbjct: 87  YDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAA 146

Query: 128 VPLSYYTGILGMPGMTAWAGFYEI-----CAPKKGEYIYVSAASGAVGQLVGQFAK-LMG 181
           +PL   T I      TAW  F++        P     I +   +G VG +  Q A+    
Sbjct: 147 LPL---TSI------TAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTD 197

Query: 182 CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYF 241
             V+ +A   E            E +K   G     ++ +                 ++ 
Sbjct: 198 LTVIATASRPET----------QEWVK-SLGAHHVIDHSKP-LAAEVAALGLGAPAFVFS 245

Query: 242 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYF 301
                K    +   +   GR       S +++   +     ++      R   F   D  
Sbjct: 246 TTHTDKHAAEIADLIAPQGRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRP-MFGTPDMS 304

Query: 302 PQYSRFLDAVLPYIREGKV-VYVEDVADGL--ENAPAALVGLFSGRNVGKQLVVV 353
            Q  R L+ V   + EG++   + +    +   N   A   + SG   GK  VV+
Sbjct: 305 EQ-GRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGK--VVI 356

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 51/219 (23%), Positives = 76/219 (34%), Gaps = 58/219 (26%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV-----------WGTTGWEEYS------LIKN 116
              G  I+  G   VV S  P F +GD V            G  G  EY+      L+  
Sbjct: 63  LILG--IDAAGT--VVSSNDPRFAEGDEVIATSYELGVSRDG--GLSEYASVPGDWLVPL 116

Query: 117 PQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICA---PKKGEYIYVSAASGAVGQLV 173
           PQ L               + G  G TA    + +       +   + V+ A+G VG + 
Sbjct: 117 PQNL---------SLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIA 167

Query: 174 GQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA----- 228
                  G  VV S G+RE            + LK + G   A       D+        
Sbjct: 168 VSMLNKRGYDVVASTGNREA----------ADYLK-QLG---ASEVISREDVYDGTLKAL 213

Query: 229 LKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGM 267
            K+ +   +D     VGGK L ++L  ++  G +A  G+
Sbjct: 214 SKQQWQGAVDP----VGGKQLASLLSKIQYGGSVAVSGL 248

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 56.8 bits (137), Expect = 5e-09
 Identities = 49/232 (21%), Positives = 85/232 (36%), Gaps = 23/232 (9%)

Query: 128  VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS 187
            VP+ Y          TA+         + GE + + + SG VGQ     A   GC V  +
Sbjct: 1648 VPIVY---------TTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTT 1698

Query: 188  AGSREKVWLIPMQSQLVELLKNKF-GFDDA--FNYKEENDLDAALKRCFPEGIDIYFEHV 244
             GS EK             L+ +F   D+    N ++ +     L+    +G+D+    +
Sbjct: 1699 VGSAEK----------RAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSL 1748

Query: 245  GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
              + L A +  +  HGR    G     N         L NV +  I ++          +
Sbjct: 1749 AEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGG-ATW 1807

Query: 305  SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 356
                + +   I+EG V  ++          AA   +  G+++GK ++ V  E
Sbjct: 1808 QEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 55/299 (18%), Positives = 97/299 (32%), Gaps = 59/299 (19%)

Query: 76  PGSPIEGFGVAKVVDSGHPE---FKKGDLVWGTTG--------WEEYSLIKNPQGLFKIH 124
           PG    G   A VV    P       GD V G            +   + + P G     
Sbjct: 263 PGVASLGSEGAGVVVETGPGVTGLAPGDRVMGMIPKAFGPLAVADHRMVTRIPAGWSFAR 322

Query: 125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
              VP+ +         +TA+    ++   + GE + V +A+G VG    Q A+ +G  V
Sbjct: 323 AASVPIVF---------LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEV 373

Query: 185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKRCFPEGIDIYFE 242
             +A   +                           + +  +     L      G+D+   
Sbjct: 374 YATASEDK---------------WQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLN 418

Query: 243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP 302
            + G+  DA L  +   GR      + + ++  P      +   +  +  + F   +  P
Sbjct: 419 SLAGEFADASLRMLPRGGRFLE---LGKTDVRDPVE----VADAHPGVSYQAFDTVEAGP 471

Query: 303 Q-YSRFLDAVLPYIREGKV------VYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS 354
           Q     L  ++       +       +  DV      AP AL  L   R+VGK  +V++
Sbjct: 472 QRIGEMLHELVELFEGRVLEPLPVTAW--DVRQ----APEALRHLSQARHVGK--LVLT 522

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 17/52 (32%), Positives = 27/52 (51%)

Query: 142 MTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK 193
           +TAW    E+     GE + + +A+G VG      AK++G  +  +AGS  K
Sbjct: 24  LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK 75

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 46.1 bits (110), Expect = 8e-06
 Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 24/194 (12%)

Query: 166 SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL 225
           +G +G L  Q A  +G          + V  I + S+ + L K  FG    FN  E +  
Sbjct: 169 AGTIGLLAIQCAVALGA---------KSVTAIDISSEKLALAK-SFGAMQTFNSSEMSAP 218

Query: 226 DAALKRCFPEGIDIYFEHVG-GKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMN 284
                        +  E  G  + ++  +     H ++A  G + Q              
Sbjct: 219 QMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQ---DLHLTSATFGK 275

Query: 285 VVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVAD------GLENAPAALV 338
           ++ K + + G  +    P   +  +     + E K+     +          E+   A+ 
Sbjct: 276 ILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKL----SLEPLIAHRGSFESFAQAVR 331

Query: 339 GLFSGRNVGKQLVV 352
            +      GK L++
Sbjct: 332 DIARNAMPGKVLLI 345

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 33/209 (15%)

Query: 153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG 212
            P  G+ + ++ A G +G L    AK  G            V +        EL K K G
Sbjct: 164 GPISGKSVLITGA-GPLGLLGIAVAKASGA---------YPVIVSEPSDFRRELAK-KVG 212

Query: 213 FDDAFNYKEENDLDAALKRCFPEGIDIYFEHVG-GKMLDAVLLNMRLHGRIAACGMISQY 271
            D   N  EE+ +   +      G+D++ E  G  K L+  L  +   GR++  G+    
Sbjct: 213 ADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGL---- 268

Query: 272 NLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVA---- 327
                  +     +++K + + G      +  +      V   ++ GK+    ++     
Sbjct: 269 -YPGKVTIDFNNLIIFKALTIYGITGRHLWETW----YTVSRLLQSGKL----NLDPIIT 319

Query: 328 ---DGLENAPAALVGLFSGRNVGKQLVVV 353
               G +    A   + +G+  GK + ++
Sbjct: 320 HKYKGFDKYEEAFELMRAGK-TGKVVFML 347

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 43.4 bits (103), Expect = 7e-05
 Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 42/204 (20%)

Query: 166 SGAVGQLVGQFAKLMGC---YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE 222
            G +G L  Q A+L G     +     ++              L + + G     +    
Sbjct: 191 GGVIGLLTVQLARLAGATTVILSTRQATK------------RRLAE-EVGATATVDPSAG 237

Query: 223 NDLDA--ALKRCFPEGIDIYFEHVG-GKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGV 279
           + ++A        P G+D+  E  G  + +       +  G +   G+     L Q E V
Sbjct: 238 DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGV-----LPQGEKV 292

Query: 280 H-NLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVAD------GLEN 332
                +++++ +R+ G   F     +          +  G +    ++         L+ 
Sbjct: 293 EIEPFDILFRELRVLG--SFINPFVH----RRAADLVATGAI----EIDRMISRRISLDE 342

Query: 333 APAALVGLFSGRNVGKQLVVVSRE 356
           AP  +    +   V K LV+ S E
Sbjct: 343 APDVISNPAAAGEV-KVLVIPSAE 365

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 55/321 (17%), Positives = 108/321 (33%), Gaps = 79/321 (24%)

Query: 74  FTPGSPIEGFGVAKVVDSGHPEFKKGDLV-----WG-------TTGWE------------ 109
           +T G   E  G  + V  G    +KGD V                G +            
Sbjct: 75  YTLGH--ENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLN 132

Query: 110 ------EY------SLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAP-KK 156
                 E+      S+IK P+ + +    ++        L   G+TA+    +       
Sbjct: 133 IDGGFAEFMRTSHRSVIKLPKDISREKLVEM------APLADAGITAYRAVKKAARTLYP 186

Query: 157 GEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDD 215
           G Y+ +    G +G +  Q  K+M    V+      EK          ++L + + G D 
Sbjct: 187 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEK----------LKLAE-RLGADH 234

Query: 216 AFNYKEENDLDAALKRCFPEGIDIYFEHVG-GKMLDAVLLNMRLHGRIAACGMISQYNLS 274
             + +  + +   ++     G+++  + VG    +D     +   GR+   G        
Sbjct: 235 VVDAR-RDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGY------- 286

Query: 275 QPEGVH-NLMNVVYKRIRMEGFVVFDYFPQYSRF-LDAVLPYIREGKV-VYVEDVADGLE 331
               +    + V+   +  EG +V       +   L  ++    +GKV V V+     L+
Sbjct: 287 -GGELRFPTIRVISSEVSFEGSLV------GNYVELHELVTLALQGKVRVEVDIH--KLD 337

Query: 332 NAPAALVGLFSGRNVGKQLVV 352
                L  L  G  +G+ +++
Sbjct: 338 EINDVLERLEKGEVLGRAVLI 358

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 33/234 (14%), Positives = 72/234 (30%), Gaps = 21/234 (8%)

Query: 123 IHHTDVPLSYYTGILGMPGMTAW-AGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMG 181
               +    +  G L  P   A+ A        + G+ + +    G +G       K  G
Sbjct: 179 EGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAG 237

Query: 182 CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYF 241
                      KV L         L K + G D   +  +EN ++A L      G  ++ 
Sbjct: 238 A---------SKVILSEPSEVRRNLAK-ELGADHVIDPTKENFVEAVLDYTNGLGAKLFL 287

Query: 242 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYF 301
           E  G   L    +   +         ++    +  +          +R ++ G     + 
Sbjct: 288 EATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVG--SQGHS 345

Query: 302 PQYSRFLDAVLPYIREGKVVYVEDVADG---LENAPAALVGLFSGRNVGKQLVV 352
              +     V+  +  G  + +  +      +E  P  +  L + +++ K  ++
Sbjct: 346 GHGT--FPRVISLMASG--MDMTKIISKTVSMEEIPEYIKRLQTDKSLVKVTML 395

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	356
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.9
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.8
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.71
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.68
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.62
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.49
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.44
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.26
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.25
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.16
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.15
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.14
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.03
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.94
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.93
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.92
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.92
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.91
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.9
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.9
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.89
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.89
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.88
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.87
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.87
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.87
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.87
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.87
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.86
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.86
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.86
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.86
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.86
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.85
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.85
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.85
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.85
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.84
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.84
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.84
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.83
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.83
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.82
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.81
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.81
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.8
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.79
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.79
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.79
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.78
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.77
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.76
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.75
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.75
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.74
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.74
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.74
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.74
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.73
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.73
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.73
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.73
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.73
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.73
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.72
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.71
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.7
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.69
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.69
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.69
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.68
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.68
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.68
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.68
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.68
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.67
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.67
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.67
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.66
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.66
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.66
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.66
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.66
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.66
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.65
1spx_A	278	Short-chain reductase family member (5L265); paral	97.65
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.65
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.64
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.64
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.64
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.63
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.62
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.62
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.61
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.61
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.61
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.61
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.6
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.6
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.6
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.59
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.59
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.58
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.58
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.57
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.57
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.57
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.57
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.56
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.56
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.56
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.56
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.56
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.55
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.55
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.55
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.54
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.54
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.54
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.53
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.53
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.52
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.52
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.52
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.52
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.51
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.51
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.51
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.51
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.5
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.5
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.5
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.5
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.5
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.5
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.5
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.5
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.49
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.48
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.48
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.47
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.47
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.47
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.46
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.46
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.46
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.46
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.45
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.45
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.44
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.43
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.43
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.43
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.42
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.41
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.41
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.41
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.41
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.4
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.39
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.39
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.38
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.38
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.37
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.37
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.37
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.36
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.36
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.36
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.36
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.35
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.35
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.35
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.35
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.34
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.34
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.33
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.32
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.32
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.31
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.31
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.31
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.3
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.29
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.28
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.28
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.28
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.27
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.27
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.27
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.27
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.26
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.26
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.25
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.24
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.24
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.24
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.23
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.22
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.21
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	97.2
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.2
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.19
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.19
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.19
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.19
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.18
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.18
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.17
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.17
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.16
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.16
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.16
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.14
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.13
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.11
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.11
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.1
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.09
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.09
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.09
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.09
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.08
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.08
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.08
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.08
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.07
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.06
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.06
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.06
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.06
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.05
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.04
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.04
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.03
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.03
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.02
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.01
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.0
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.99
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.98
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.95
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.94
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.93
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.92
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.92
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.91
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.91
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.91
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.91
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.9
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.88
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	96.88
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.88
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.87
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.85
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.84
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.83
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.83
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.82
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.81
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	96.81
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.79
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.79
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.77
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.77
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.77
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.76
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	96.75
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.74
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.74
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.72
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.7
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.69
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.68
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.66
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.57
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.56
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.56
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.55
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.54
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.53
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.52
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.5
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.49
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.49
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.48
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.47
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.44
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.44
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.42
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.41
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.4
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.4
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.4
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.38
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.38
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.37
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.36
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.36
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.36
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.35
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.34
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.33
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.32
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.32
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.31
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.31
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.3
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.28
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.27
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.26
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.26
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	96.26
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.24
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.22
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.21
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.19
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.16
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.16
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.15
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.15
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.12
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.11
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.11
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.09
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.07
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.07
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.06
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.03
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.03
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.02
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	96.01
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.97
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.97
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.97
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.96
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	95.96
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	95.94
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	95.94
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.94
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.94
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.93
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.91
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	95.91
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.88
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.85
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	95.85
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.84
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	95.8
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.77
4had_A	350	Probable oxidoreductase protein; structural genomi	95.77
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.76
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.76
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.76
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.71
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.69
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	95.66
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.66
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	95.63
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.6
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.6
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	95.59
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.58
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	95.56
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.55
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.53
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	95.53
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.52
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.52
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.51
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	95.48
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.48
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.47
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.47
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	95.46
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.46
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.46
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.45
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.44
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	95.43
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.42
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	95.42
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	95.42
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.41
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	95.41
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	95.41
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	95.4
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.4
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.4
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.39
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.35
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.33
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.32
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.3
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.3
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	95.29
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.29
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	95.29
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.29
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.28
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	95.28
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.27
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.27
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	95.26
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.26
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	95.25
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.24
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.23
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.23
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	95.22
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.21
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	95.21
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	95.2
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.19
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.18
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.17
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	95.16
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.15
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	95.15
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.15
1r0k_A	388	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	95.14
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	95.13
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	95.13
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	95.12

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.5e-53  Score=398.39  Aligned_cols=322  Identities=23%  Similarity=0.316  Sum_probs=280.0

Q ss_pred             CcccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc-CCCCCCCCCCCCCccee
Q 018404            4 NSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF-NQDPDFSSFTPGSPIEG   82 (356)
Q Consensus         4 ~~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~-~~~~~~~p~v~G~e~~~   82 (356)
                      .++|.+|||+++.++  |+|.  .++++  ++|.| +++++||+|||.+++||++|++.+.+ +.....+|.++|||+  
T Consensus        23 ~~~p~~MkA~~~~~~--g~~~--~l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~--   93 (353)
T 4dup_A           23 MSLPQEMRFVDLKSF--GGPD--VMVIG--KRPLP-VAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLEL--   93 (353)
T ss_dssp             CCCCSSEEEEEESSS--SSGG--GEEEE--EECCC-CCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEE--
T ss_pred             CCCChheeEEEEccC--CCcc--ceEEE--eccCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccccc--
Confidence            347889999999998  8774  55664  56666 88999999999999999999998873 333445689999995  


Q ss_pred             cEEEEEecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCE
Q 018404           83 FGVAKVVDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEY  159 (356)
Q Consensus        83 ~G~V~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~  159 (356)
                      +|+|+++|+++++|++||+|+++   |+|+||++++++. ++++ |+++++. ++|+++++++|||+++.+.+++++|++
T Consensus        94 ~G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~  170 (353)
T 4dup_A           94 SGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQ-ILPF-PKGYDAV-KAAALPETFFTVWANLFQMAGLTEGES  170 (353)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTTCCHH-HHHTSHHHHHHHHHHHTTTTCCCTTCE
T ss_pred             EEEEEEECCCCCCCCCCCEEEEecCCCceeeEEEEcHHH-cEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCE
Confidence            99999999999999999999986   8999999999999 9999 9996555 588899999999999988899999999


Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccE
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDI  239 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~  239 (356)
                      |||+||+|++|++++|+++.+|++|++++++++++          +.++ ++|++.++|+.+. ++.+.+.+.+++++|+
T Consensus       171 VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----------~~~~-~lGa~~~~~~~~~-~~~~~~~~~~~~g~Dv  238 (353)
T 4dup_A          171 VLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKC----------EACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDI  238 (353)
T ss_dssp             EEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHH-HHTCSEEEETTTS-CHHHHHHHHHSSCEEE
T ss_pred             EEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-hcCCCEEEeCCch-HHHHHHHHHhCCCceE
Confidence            99999999999999999999999999999999998          8888 9999999999887 8899999888449999


Q ss_pred             EEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchh-----hHHHHHHHHHHH
Q 018404          240 YFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP-----QYSRFLDAVLPY  314 (356)
Q Consensus       240 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~  314 (356)
                      +|||+|+..+..++++|+++|+++.+|...+..    ....+...++.+++++.++....+..     ...+.+++++++
T Consensus       239 vid~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l  314 (353)
T 4dup_A          239 ILDMIGAAYFERNIASLAKDGCLSIIAFLGGAV----AEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPL  314 (353)
T ss_dssp             EEESCCGGGHHHHHHTEEEEEEEEECCCTTCSE----EEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHH
T ss_pred             EEECCCHHHHHHHHHHhccCCEEEEEEecCCCc----ccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHH
Confidence            999999999999999999999999999754321    11145667888999999988765421     223447889999


Q ss_pred             HHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          315 IREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       315 ~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +++|++++.++++|+++++++||+.+.+++..||+|+++
T Consensus       315 ~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          315 LEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHCCCccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999999999999999999999999999999999999975

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=4.6e-53  Score=392.33  Aligned_cols=321  Identities=19%  Similarity=0.239  Sum_probs=279.1

Q ss_pred             cccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecE
Q 018404            5 SEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         5 ~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G   84 (356)
                      ++|.+|||+++.++  |.|  +.++++  ++|.| +++++||+|||.++|||++|++.+.+.. ...+|.++|||+  +|
T Consensus         4 ~~p~~mka~~~~~~--g~~--~~l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~P~i~G~e~--~G   73 (334)
T 3qwb_A            4 TIPEQQKVILIDEI--GGY--DVIKYE--DYPVP-SISEEELLIKNKYTGVNYIESYFRKGIY-PCEKPYVLGREA--SG   73 (334)
T ss_dssp             -CCSEEEEEEESSS--SSG--GGEEEE--EEECC-CCCTTEEEEEEEEEECCTTHHHHHHTSS-CCCSSEECCSEE--EE
T ss_pred             CCchheEEEEEecC--CCC--ceeEEE--eccCC-CCCCCEEEEEEEEEecCHHHHHHHCCCC-CCCCCCccccce--EE
Confidence            37789999999998  776  356665  55666 7899999999999999999998877332 245789999995  99


Q ss_pred             EEEEecCCCCCCCCCCEEEEc--cccceeEeec-CCCcceeecCCCCCccch---hcccCcchHHHHHHHHHHcCCCCCC
Q 018404           85 VAKVVDSGHPEFKKGDLVWGT--TGWEEYSLIK-NPQGLFKIHHTDVPLSYY---TGILGMPGMTAWAGFYEICAPKKGE  158 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~-~~~~l~~~~p~~~~~~~~---~a~l~~~~~tA~~~l~~~~~~~~g~  158 (356)
                      +|+++|+++++|++||+|+++  |+|+||++++ ++. ++++ |+++++. +   ++++++.++|||+++.+.+++++|+
T Consensus        74 ~V~~vG~~v~~~~~GdrV~~~~~G~~aey~~v~~~~~-~~~~-P~~~~~~-~~~~aa~~~~~~~ta~~~l~~~~~~~~g~  150 (334)
T 3qwb_A           74 TVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGP-VMKL-PKGTSDE-ELKLYAAGLLQVLTALSFTNEAYHVKKGD  150 (334)
T ss_dssp             EEEEECTTCCSCCTTCEEEEECSSCSBSEEEEETTSS-EEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHTTSCCCTTC
T ss_pred             EEEEECCCCCCCCCCCEEEEeeCCcceEEEEecCcce-EEEC-CCCCCHH-HhhhhhhhhhHHHHHHHHHHHhccCCCCC
Confidence            999999999999999999976  8999999999 888 9999 9996665 5   5778899999999998878999999


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-Cc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~  237 (356)
                      +|||+||+|++|++++|+++.+|++|++++++++++          +.++ ++|++.++|+.+. ++.+.+.+.+++ ++
T Consensus       151 ~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----------~~~~-~~ga~~~~~~~~~-~~~~~~~~~~~~~g~  218 (334)
T 3qwb_A          151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKL----------KIAK-EYGAEYLINASKE-DILRQVLKFTNGKGV  218 (334)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHH-HTTCSEEEETTTS-CHHHHHHHHTTTSCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HcCCcEEEeCCCc-hHHHHHHHHhCCCCc
Confidence            999999999999999999999999999999999998          8888 9999999999887 899999999987 99


Q ss_pred             cEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc---hhhHHHHHHHHHHH
Q 018404          238 DIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY---FPQYSRFLDAVLPY  314 (356)
Q Consensus       238 d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~  314 (356)
                      |++|||+|+..+..++++|+++|+++.+|...+.     ....+...++.+++++.++....+   +....+.+++++++
T Consensus       219 D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  293 (334)
T 3qwb_A          219 DASFDSVGKDTFEISLAALKRKGVFVSFGNASGL-----IPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGL  293 (334)
T ss_dssp             EEEEECCGGGGHHHHHHHEEEEEEEEECCCTTCC-----CCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHH
T ss_pred             eEEEECCChHHHHHHHHHhccCCEEEEEcCCCCC-----CCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999975432     122344556788999888765544   34455678899999


Q ss_pred             HHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          315 IREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       315 ~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      +++|++++.++++|+++++++||+.+.+++..||+|+++++
T Consensus       294 ~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          294 VNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             HHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             HHCCCccCceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            99999999999999999999999999999999999999864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=4.9e-53  Score=393.21  Aligned_cols=316  Identities=18%  Similarity=0.203  Sum_probs=270.5

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G   84 (356)
                      +|.+|||+++.++  |+|.  .+.++  ++|.| +++++||+|||.++|||++|++.+.+. .....+|.++|||+  +|
T Consensus        18 ~p~~MkA~~~~~~--g~~~--~l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~--~G   88 (342)
T 4eye_A           18 GPGSMKAIQAQSL--SGPE--GLVYT--DVETP-GAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIET--AG   88 (342)
T ss_dssp             CCCEEEEEEECSS--SGGG--GEEEE--EEECC-CCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEE--EE
T ss_pred             CCcceEEEEEecC--CCCc--eeEEE--eCCCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeE--EE
Confidence            5788999999998  7774  45664  55666 789999999999999999999988733 33456799999995  89


Q ss_pred             EEEEecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEE
Q 018404           85 VAKVVDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIY  161 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~Vl  161 (356)
                      +|+++|++++ |++||+|+++   |+|+||++++++. ++++ |+++++. ++|+++++++|||+++.+.+++++|++||
T Consensus        89 ~V~~vG~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~Vl  164 (342)
T 4eye_A           89 VVRSAPEGSG-IKPGDRVMAFNFIGGYAERVAVAPSN-ILPT-PPQLDDA-EAVALIANYHTMYFAYARRGQLRAGETVL  164 (342)
T ss_dssp             EEEECCTTSS-CCTTCEEEEECSSCCSBSEEEECGGG-EEEC-CTTSCHH-HHHHHTTHHHHHHHHHHTTSCCCTTCEEE
T ss_pred             EEEEECCCCC-CCCCCEEEEecCCCcceEEEEEcHHH-eEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCEEE
Confidence            9999999999 9999999986   7999999999999 9999 9996555 57789999999999998889999999999


Q ss_pred             EecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEE
Q 018404          162 VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIY  240 (356)
Q Consensus       162 I~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~v  240 (356)
                      |+|++|++|++++|+++.+|++|++++++++++          +.++ ++|++.++|+. . ++.+.+++.+++ ++|++
T Consensus       165 V~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----------~~~~-~~ga~~v~~~~-~-~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          165 VLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT----------EFVK-SVGADIVLPLE-E-GWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             ESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH----------HHHH-HHTCSEEEESS-T-THHHHHHHHTTTSCEEEE
T ss_pred             EECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-hcCCcEEecCc-h-hHHHHHHHHhCCCCceEE
Confidence            999999999999999999999999999999998          8898 89999999998 5 899999999988 99999


Q ss_pred             EeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc----hhhHHHHHHHHHHHHH
Q 018404          241 FEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY----FPQYSRFLDAVLPYIR  316 (356)
Q Consensus       241 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~  316 (356)
                      |||+|+..+..++++|+++|+++.+|...+..     ...+...++.+++++.++....+    ++...+.+++++++++
T Consensus       232 id~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~  306 (342)
T 4eye_A          232 VDPIGGPAFDDAVRTLASEGRLLVVGFAAGGI-----PTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVA  306 (342)
T ss_dssp             EESCC--CHHHHHHTEEEEEEEEEC---------------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred             EECCchhHHHHHHHhhcCCCEEEEEEccCCCC-----CccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999754321     12233446778999998876543    3445678999999999


Q ss_pred             cCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          317 EGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       317 ~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +| +++.++++|+++++++||+.+.+++..||+|+++
T Consensus       307 ~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          307 EG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             TT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99 9999999999999999999999999999999863

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.8e-52  Score=392.43  Aligned_cols=311  Identities=23%  Similarity=0.277  Sum_probs=273.7

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc-CCCCCCCCCCCCCcceecE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF-NQDPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~-~~~~~~~p~v~G~e~~~~G   84 (356)
                      ||.+|||+++.++  | |  ..++++  ++|.| +++++||+|||.++|||++|++.+.+ +.....+|.++|||+  +|
T Consensus        24 m~~~mkA~~~~~~--~-~--~~l~~~--e~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~--~G   93 (363)
T 3uog_A           24 MSKWMQEWSTETV--A-P--HDLKLA--ERPVP-EAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDM--SG   93 (363)
T ss_dssp             CCSEEEEEEBSCT--T-T--TCCEEE--EEECC-CCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEE--EE
T ss_pred             CchhhEEEEEccC--C-C--CCcEEE--eeeCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccce--EE
Confidence            4567999999885  3 2  346665  45556 88999999999999999999998873 333456799999995  99


Q ss_pred             EEEEecCCCCCCCCCCEEEEc---------------------------cccceeEeecCCCcceeecCCCCCccchhccc
Q 018404           85 VAKVVDSGHPEFKKGDLVWGT---------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGIL  137 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l  137 (356)
                      +|+++|++|++|++||+|++.                           |+|+||++++++. ++++ |+++++. ++|++
T Consensus        94 ~V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l  170 (363)
T 3uog_A           94 VVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGW-FVAA-PKSLDAA-EASTL  170 (363)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGG-EEEC-CTTSCHH-HHHTT
T ss_pred             EEEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHH-eEEC-CCCCCHH-HHhhc
Confidence            999999999999999999975                           8999999999999 9999 9996555 68889


Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE
Q 018404          138 GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF  217 (356)
Q Consensus       138 ~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv  217 (356)
                      +++++|||+++.+.+++++|++|||+| +|++|++++|+|+.+|++|++++++++++          +.++ ++|+++++
T Consensus       171 ~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~----------~~~~-~lGa~~vi  238 (363)
T 3uog_A          171 PCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKL----------DRAF-ALGADHGI  238 (363)
T ss_dssp             TTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHH-HHTCSEEE
T ss_pred             ccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhH----------HHHH-HcCCCEEE
Confidence            999999999997788999999999999 89999999999999999999999999998          8888 99999999


Q ss_pred             ecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeecee
Q 018404          218 NYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFV  296 (356)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (356)
                      |.... ++.+.+++.+++ ++|++|||+|+..+..++++|+++|+++.+|...+.     ....+...++.+++++.++.
T Consensus       239 ~~~~~-~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~  312 (363)
T 3uog_A          239 NRLEE-DWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGF-----EVSGPVGPLLLKSPVVQGIS  312 (363)
T ss_dssp             ETTTS-CHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSC-----EECCBTTHHHHTCCEEEECC
T ss_pred             cCCcc-cHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCc-----ccCcCHHHHHhCCcEEEEEe
Confidence            95545 899999999988 999999999999999999999999999999985542     12345566788999999987


Q ss_pred             eecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          297 VFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       297 ~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ...     .++++++++++++|++++.++++|+|+++++||+.+.+++ .||+|+++
T Consensus       313 ~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          313 VGH-----RRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             CCC-----HHHHHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             cCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            765     6789999999999999999999999999999999999988 89999975

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=5.4e-52  Score=385.99  Aligned_cols=320  Identities=16%  Similarity=0.225  Sum_probs=269.9

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc-CCCCCCCCCCCCCcceecE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF-NQDPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~-~~~~~~~p~v~G~e~~~~G   84 (356)
                      |+++|||+++.++  |+|. +.++++  ++|.| +++++||+|||.++|||++|++.+.+ +.....+|.++|||+  +|
T Consensus         1 M~~~mka~~~~~~--g~p~-~~l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~--~G   72 (340)
T 3gms_A            1 MSLHGKLIQFHKF--GNPK-DVLQVE--YKNIE-PLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEG--VG   72 (340)
T ss_dssp             -CCEEEEEEESSC--SCHH-HHEEEE--EEECC-CCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCC--EE
T ss_pred             CCcccEEEEEecC--CCch-heEEEE--ecCCC-CCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcce--EE
Confidence            3468999999998  8773 245554  55666 78999999999999999999998873 333457799999996  89


Q ss_pred             EEEEecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEE
Q 018404           85 VAKVVDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIY  161 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~Vl  161 (356)
                      +|+++|+++++|++||+|+++   |+|+||++++++. ++++ |+++++. ++|++++.++|||+++.+.+++++|++||
T Consensus        73 ~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~v-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~Vl  149 (340)
T 3gms_A           73 IVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADF-VVPI-PDSIDDF-TAAQMYINPLTAWVTCTETLNLQRNDVLL  149 (340)
T ss_dssp             EEEEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGG-EEEC-CTTSCHH-HHTTSSHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred             EEEEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHH-eEEC-CCCCCHH-HHhhhcchHHHHHHHHHHhcccCCCCEEE
Confidence            999999999999999999976   8999999999999 9999 9996555 68888999999999998889999999999


Q ss_pred             EecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEE
Q 018404          162 VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIY  240 (356)
Q Consensus       162 I~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~v  240 (356)
                      |+|++|++|++++|+|+.+|++|++++++++++          +.++ ++|+++++|+.+. ++.+.+.+.+++ ++|++
T Consensus       150 V~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----------~~~~-~lga~~~~~~~~~-~~~~~~~~~~~~~g~Dvv  217 (340)
T 3gms_A          150 VNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT----------EELL-RLGAAYVIDTSTA-PLYETVMELTNGIGADAA  217 (340)
T ss_dssp             ESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH----------HHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEE
T ss_pred             EeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-hCCCcEEEeCCcc-cHHHHHHHHhCCCCCcEE
Confidence            999989999999999999999999999999998          8998 8999999999887 899999999988 99999


Q ss_pred             EeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH-hhcceeeceeeecc-----hhhHHHHHHHHHHH
Q 018404          241 FEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV-YKRIRMEGFVVFDY-----FPQYSRFLDAVLPY  314 (356)
Q Consensus       241 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~  314 (356)
                      |||+|+.....++++|+++|+++.+|...+..       .+...+. ..++.+..+....+     +....+.+++++++
T Consensus       218 id~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  290 (340)
T 3gms_A          218 IDSIGGPDGNELAFSLRPNGHFLTIGLLSGIQ-------VNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRL  290 (340)
T ss_dssp             EESSCHHHHHHHHHTEEEEEEEEECCCTTSCC-------CCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred             EECCCChhHHHHHHHhcCCCEEEEEeecCCCC-------CCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHH
Confidence            99999987888889999999999999854421       1222222 23455444443322     23346789999999


Q ss_pred             HHcCCCcc-ceeeeeCCCcHHHHHHHHHcCCC-cceEEEEecC
Q 018404          315 IREGKVVY-VEDVADGLENAPAALVGLFSGRN-VGKQLVVVSR  355 (356)
Q Consensus       315 ~~~g~l~~-~i~~~~~l~~~~~a~~~~~~~~~-~gk~vv~~~~  355 (356)
                      +++|++++ .++++|+++++++||+.+.+++. .||+|+++.+
T Consensus       291 ~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~  333 (340)
T 3gms_A          291 VENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE  333 (340)
T ss_dssp             HHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred             HHcCCCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence            99999997 58889999999999999999885 4999999865

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=6.4e-52  Score=383.19  Aligned_cols=315  Identities=21%  Similarity=0.242  Sum_probs=273.2

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||++++++  |+|.  .++++  ++|.| +++++||+|||.+++||++|++.+.+......+|.++|||+  +|+|+++
T Consensus         2 MkA~~~~~~--g~~~--~l~~~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~--~G~V~~v   72 (325)
T 3jyn_A            2 AKRIQFSTV--GGPE--VLEYV--DFEPE-APGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEG--AGVVEAV   72 (325)
T ss_dssp             EEEEEBSSC--SSGG--GCEEE--EECCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCE--EEEEEEE
T ss_pred             cEEEEEecC--CCcc--eeEEe--ecCCC-CCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcee--EEEEEEE
Confidence            899999998  8874  56665  55566 88999999999999999999998874433356789999995  9999999


Q ss_pred             cCCCCCCCCCCEEEEc----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecC
Q 018404           90 DSGHPEFKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAA  165 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga  165 (356)
                      |+++++|++||+|++.    |+|+||++++++. ++++ |+++++. ++|++++.++|||+++.+.+++++|++|||+||
T Consensus        73 G~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  149 (325)
T 3jyn_A           73 GDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEAN-LVKL-ADSVSFE-QAAALMLKGLTVQYLLRQTYQVKPGEIILFHAA  149 (325)
T ss_dssp             CTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGG-EEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCCCCCCEEEEecCCCccccceEEecHHH-eEEC-CCCCCHH-HHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999999999975    7999999999999 9999 9996655 688889999999999988889999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCC
Q 018404          166 SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHV  244 (356)
Q Consensus       166 ~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~  244 (356)
                      +|++|++++|+++.+|++|++++++++++          +.++ ++|++.++|+.+. ++.+.+.+.+++ ++|++|||+
T Consensus       150 ~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----------~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~  217 (325)
T 3jyn_A          150 AGGVGSLACQWAKALGAKLIGTVSSPEKA----------AHAK-ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGV  217 (325)
T ss_dssp             TSHHHHHHHHHHHHHTCEEEEEESSHHHH----------HHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEESS
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HcCCCEEEeCCCc-cHHHHHHHHhCCCCceEEEECC
Confidence            99999999999999999999999999998          8888 9999999999887 899999999987 999999999


Q ss_pred             CchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhh-cceeeceeeecc---hhhHHHHHHHHHHHHHcCCC
Q 018404          245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYK-RIRMEGFVVFDY---FPQYSRFLDAVLPYIREGKV  320 (356)
Q Consensus       245 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~g~l  320 (356)
                      |+..+..++++|+++|+++.+|...+.     ....+...++.+ .+.+.++....+   ++...+.++++++++++|++
T Consensus       218 g~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  292 (325)
T 3jyn_A          218 GQDTWLTSLDSVAPRGLVVSFGNASGP-----VSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKL  292 (325)
T ss_dssp             CGGGHHHHHTTEEEEEEEEECCCTTCC-----CCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSS
T ss_pred             ChHHHHHHHHHhcCCCEEEEEecCCCC-----CCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCe
Confidence            999999999999999999999975432     112344555556 566655443332   34556778899999999999


Q ss_pred             ccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          321 VYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       321 ~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++.++++|+++++++||+.+.+++..||+|+.+
T Consensus       293 ~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          293 KVDGIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             CCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             eCccccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            999999999999999999999999999999863

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=5.7e-51  Score=378.59  Aligned_cols=325  Identities=40%  Similarity=0.663  Sum_probs=277.9

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcce--ecEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIE--GFGV   85 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~--~~G~   85 (356)
                      ++||||++++++.|.|.+..+++++  +|.| +|+++||+|||.+++||++|+..+.. .....+|.++|||+.  ++|+
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~d~~~~~~-~~~~~~p~~~G~e~g~~~~G~   81 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVE--TPLG-EPAEGQILVKNEYLSLDPAMRGWMND-ARSYIPPVGIGEVMRALGVGK   81 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEE--EECC-CCCTTCEEEEEEEEECCTHHHHHHSC-SCCSSCCCCTTSBCCCEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEe--ccCC-CCCCCEEEEEEEEEEeCHHHHhhhhc-ccccCCCCCCCcccCCceEEE
Confidence            5799999998766877667888864  4555 78999999999999999999887763 223356788888854  3788


Q ss_pred             EEEecCCCCCCCCCCEEEEccccceeEeecCCCcceeecCCCCCccchh--cccCcchHHHHHHHHHHcCCCCCCEEEEe
Q 018404           86 AKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYT--GILGMPGMTAWAGFYEICAPKKGEYIYVS  163 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~--a~l~~~~~tA~~~l~~~~~~~~g~~VlI~  163 (356)
                      |++  +++++|++||+|++.|+|+||++++++. ++++ |++++.. ++  |+++++++|||+++.+.+++++|++|||+
T Consensus        82 V~~--~~v~~~~vGdrV~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~  156 (336)
T 4b7c_A           82 VLV--SKHPGFQAGDYVNGALGVQDYFIGEPKG-FYKV-DPSRAPL-PRYLSALGMTGMTAYFALLDVGQPKNGETVVIS  156 (336)
T ss_dssp             EEE--ECSTTCCTTCEEEEECCSBSEEEECCTT-CEEE-CTTTSCG-GGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEES
T ss_pred             EEe--cCCCCCCCCCEEeccCCceEEEEechHH-eEEc-CCCCCch-HHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            887  4688999999999999999999999999 9999 8885333 33  78999999999999888999999999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHH-HhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEe
Q 018404          164 AASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELL-KNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE  242 (356)
Q Consensus       164 ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid  242 (356)
                      |++|++|++++|+++.+|++|++++++++++          +.+ + ++|++.++|+.+. ++.+.+.+.+++++|++||
T Consensus       157 Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----------~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~  224 (336)
T 4b7c_A          157 GAAGAVGSVAGQIARLKGCRVVGIAGGAEKC----------RFLVE-ELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFD  224 (336)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHHH-TTCCSEEEETTTS-CHHHHHHHHCTTCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHH-HcCCCEEEECCCH-HHHHHHHHhcCCCceEEEE
Confidence            9999999999999999999999999999998          888 6 9999999999887 8999999988669999999


Q ss_pred             CCCchHHHHHHHhhccCCeEEEEccccccCCC-CCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc
Q 018404          243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLS-QPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV  321 (356)
Q Consensus       243 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~  321 (356)
                      |+|+..+..++++|+++|+++.+|........ ......+...++.+++++.++....+.....+.++++++++++|+++
T Consensus       225 ~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~  304 (336)
T 4b7c_A          225 NVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQ  304 (336)
T ss_dssp             SSCHHHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSC
T ss_pred             CCCcchHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcc
Confidence            99999999999999999999999986532110 01123455678889999999988776555678999999999999999


Q ss_pred             cceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          322 YVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       322 ~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +.+...++++++++||+.+.+++..||+|+++
T Consensus       305 ~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          305 SREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             CCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99888899999999999999999999999975

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=3.6e-51  Score=385.77  Aligned_cols=318  Identities=18%  Similarity=0.225  Sum_probs=271.3

Q ss_pred             CCcccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCccee
Q 018404            3 ANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEG   82 (356)
Q Consensus         3 ~~~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~   82 (356)
                      ++.+|++|||++++++  |+|    ++++  ++|.| +|+++||+|||.+++||++|++.+.+......+|.++|||+  
T Consensus         2 ~~~~~~tmkA~v~~~~--~~~----l~~~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~--   70 (378)
T 3uko_A            2 TQGQVITCKAAVAYEP--NKP----LVIE--DVQVA-PPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEA--   70 (378)
T ss_dssp             CTTSCEEEEEEEBCST--TSC----CEEE--EEEEC-CCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEE--
T ss_pred             CcccceeeEEEEEecC--CCc----cEEE--EecCC-CCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccc--
Confidence            3558899999999987  665    5665  45555 78999999999999999999998885545567899999995  


Q ss_pred             cEEEEEecCCCCCCCCCCEEEEc----------------------------------------------------cccce
Q 018404           83 FGVAKVVDSGHPEFKKGDLVWGT----------------------------------------------------TGWEE  110 (356)
Q Consensus        83 ~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------------g~~~~  110 (356)
                      +|+|+++|++|++|++||+|++.                                                    |+|+|
T Consensus        71 ~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae  150 (378)
T 3uko_A           71 AGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQ  150 (378)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBS
T ss_pred             eEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEe
Confidence            99999999999999999999853                                                    48999


Q ss_pred             eEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeC
Q 018404          111 YSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAG  189 (356)
Q Consensus       111 ~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~  189 (356)
                      |++++++. ++++ |+++++. ++|.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++
T Consensus       151 y~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~  226 (378)
T 3uko_A          151 YTVVHDVS-VAKI-DPTAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDI  226 (378)
T ss_dssp             EEEEEGGG-EEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECS
T ss_pred             EEEechhh-eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Confidence            99999999 9999 9996665 688899999999999988899999999999995 9999999999999999 8999999


Q ss_pred             CcchhccccchhHHHHHHHhhcCCCEEEecC--CcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEE
Q 018404          190 SREKVWLIPMQSQLVELLKNKFGFDDAFNYK--EENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAAC  265 (356)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~--~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~  265 (356)
                      +++++          +.++ ++|+++++|+.  +. ++.+.+++.+++++|+||||+|+ ..+..++++++++ |+++.+
T Consensus       227 ~~~~~----------~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~  294 (378)
T 3uko_A          227 DSKKY----------ETAK-KFGVNEFVNPKDHDK-PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV  294 (378)
T ss_dssp             CTTHH----------HHHH-TTTCCEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred             CHHHH----------HHHH-HcCCcEEEccccCch-hHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEE
Confidence            99998          9998 99999999997  44 89999999998899999999999 6899999999996 999999


Q ss_pred             ccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcC
Q 018404          266 GMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSG  343 (356)
Q Consensus       266 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~  343 (356)
                      |.....    .....+...++ +++++.|+....+.  ..++++++++++++|+++  +.++++|+|+++++||+.+.++
T Consensus       295 G~~~~~----~~~~~~~~~~~-~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g  367 (378)
T 3uko_A          295 GVAASG----QEISTRPFQLV-TGRVWKGTAFGGFK--SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEG  367 (378)
T ss_dssp             SCCCTT----CCEEECTHHHH-TTCEEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCT
T ss_pred             cccCCC----CccccCHHHHh-cCcEEEEEEecCCC--chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCC
Confidence            974321    12223344444 37888887655332  256789999999999887  5589999999999999999888


Q ss_pred             CCcceEEEEecC
Q 018404          344 RNVGKQLVVVSR  355 (356)
Q Consensus       344 ~~~gk~vv~~~~  355 (356)
                      +.. |+|+++++
T Consensus       368 ~~~-Kvvi~~~~  378 (378)
T 3uko_A          368 TCL-RCVLDTSK  378 (378)
T ss_dssp             TCS-EEEEETTC
T ss_pred             Cce-EEEEecCC
Confidence            765 99999864

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.4e-51  Score=384.16  Aligned_cols=313  Identities=21%  Similarity=0.235  Sum_probs=266.5

Q ss_pred             ccccEEEEeecccC---CCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecE
Q 018404            8 LSNKQVILKNYVEG---FPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         8 ~~~~a~~~~~~~~g---~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G   84 (356)
                      |+|||++++++  |   .|  ..+++  .++|.| +++++||+|||.+++||++|++.+.+.  ...+|.++|||+  +|
T Consensus         1 m~MkA~~~~~~--G~~~~~--~~l~~--~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~--~G   69 (346)
T 3fbg_A            1 MSLKAIGFEQP--FKLSDG--NLFKT--FNLDIP-EPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDA--IG   69 (346)
T ss_dssp             -CEEEEEBSSC--CCGGGC--CCCEE--EEECCC-CCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCE--EE
T ss_pred             CCcEEEEEEec--cccCCC--ceeEe--ccccCC-CCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCcc--EE
Confidence            47999999998  7   44  34555  556666 789999999999999999999887743  356789999995  89


Q ss_pred             EEEEecCCCCCCCCCCEEEEc------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCC---
Q 018404           85 VAKVVDSGHPEFKKGDLVWGT------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPK---  155 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~---  155 (356)
                      +|+++|+++++|++||+|+++      |+|+||++++++. ++++ |+++++. ++|+++++++|||+++.+.++++   
T Consensus        70 ~V~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~  146 (346)
T 3fbg_A           70 VVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERL-VAKA-PKNISAE-QAVSLPLTGITAYETLFDVFGISRNR  146 (346)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGG-EEEC-CSSSCHH-HHTTSHHHHHHHHHHHHTTSCCCSSH
T ss_pred             EEEEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHH-eEEC-CCCCCHH-HhhhcchhHHHHHHHHHHhcCCcccc
Confidence            999999999999999999985      7999999999998 9999 9996665 68888999999999998888888   


Q ss_pred             ---CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHh
Q 018404          156 ---KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ---~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  232 (356)
                         +|++|||+||+|++|++++|+|+.+|++|++++++++++          +.++ ++|+++++++++  ++.+.+++.
T Consensus       147 ~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~----------~~~~-~lGa~~vi~~~~--~~~~~~~~~  213 (346)
T 3fbg_A          147 NENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI----------EWTK-KMGADIVLNHKE--SLLNQFKTQ  213 (346)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH----------HHHH-HHTCSEEECTTS--CHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-hcCCcEEEECCc--cHHHHHHHh
Confidence               999999999999999999999999999999999999998          9999 899999999875  788888888


Q ss_pred             CCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-------hhhH
Q 018404          233 FPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-------FPQY  304 (356)
Q Consensus       233 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  304 (356)
                      .++++|++|||+|+ ..+..++++|+++|+++.++...        ...+...+..+++++.++.....       ....
T Consensus       214 ~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (346)
T 3fbg_A          214 GIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--------NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKH  285 (346)
T ss_dssp             TCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--------SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHH
T ss_pred             CCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--------CCCccccccccceEEEEEEEecccccchhhHHHH
Confidence            44499999999999 56799999999999999887521        12334455678888877654321       1234


Q ss_pred             HHHHHHHHHHHHcCCCccceeeee---CCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          305 SRFLDAVLPYIREGKVVYVEDVAD---GLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       305 ~~~l~~~~~~~~~g~l~~~i~~~~---~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      .+.++++++++++|++++.++++|   +++++++||+.+.+++..||+|+++++
T Consensus       286 ~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          286 HEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE  339 (346)
T ss_dssp             HHHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred             HHHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence            578999999999999999998887   999999999999999999999999875

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.9e-51  Score=383.68  Aligned_cols=322  Identities=20%  Similarity=0.262  Sum_probs=262.3

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V   86 (356)
                      |+|||++++++  |.|.  +++++  ++|.| +++++||+|||.+++||++|++.+.+. .....+|.++|||+  +|+|
T Consensus         2 m~mka~~~~~~--g~~~--~l~~~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~--~G~V   72 (349)
T 4a27_A            2 MEMRAVVLAGF--GGLN--KLRLF--RKAMP-EPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFEC--SGIV   72 (349)
T ss_dssp             CCEEEEEECSS--SSGG--GEEEE--EECCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEE--EEEE
T ss_pred             ceeEEEEEccC--CCcc--eeEEE--ecCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCcccccee--EEEE
Confidence            57999999998  7764  45564  55666 889999999999999999999988733 33456799999995  8999


Q ss_pred             EEecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEe
Q 018404           87 KVVDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVS  163 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~  163 (356)
                      +++|+++++|++||+|+++   |+|+||++++++. ++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+
T Consensus        73 ~~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~  149 (349)
T 4a27_A           73 EALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEF-VYKI-PDDMSFS-EAAAFPMNFVTAYVMLFEVANLREGMSVLVH  149 (349)
T ss_dssp             EEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCCCTTCEEEES
T ss_pred             EEeCCCCCCCCCCCEEEEecCCCcceEEEEecHHH-eEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            9999999999999999986   8999999999999 9999 9996665 6888899999999999888999999999999


Q ss_pred             cCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEe
Q 018404          164 AASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE  242 (356)
Q Consensus       164 ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid  242 (356)
                      |++|++|++++|+|+.+| ++|++++ +.++.          +.++  +|+++++| .+. ++.+.+++.+++++|+|||
T Consensus       150 Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~----------~~~~--~ga~~~~~-~~~-~~~~~~~~~~~~g~Dvv~d  214 (349)
T 4a27_A          150 SAGGGVGQAVAQLCSTVPNVTVFGTA-STFKH----------EAIK--DSVTHLFD-RNA-DYVQEVKRISAEGVDIVLD  214 (349)
T ss_dssp             STTSHHHHHHHHHHTTSTTCEEEEEE-CGGGH----------HHHG--GGSSEEEE-TTS-CHHHHHHHHCTTCEEEEEE
T ss_pred             cCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHH----------HHHH--cCCcEEEc-CCc-cHHHHHHHhcCCCceEEEE
Confidence            999999999999999995 6999888 55665          5554  89999999 555 8999999988779999999


Q ss_pred             CCCchHHHHHHHhhccCCeEEEEccccccCCCC-----------CccccchHHHHhhcceeeceeeecc------hhhHH
Q 018404          243 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQ-----------PEGVHNLMNVVYKRIRMEGFVVFDY------FPQYS  305 (356)
Q Consensus       243 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  305 (356)
                      |+|++.+..++++|+++|+++.+|.........           .....+...++.+++++.++....+      .....
T Consensus       215 ~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~  294 (349)
T 4a27_A          215 CLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIR  294 (349)
T ss_dssp             ECC-------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHH
T ss_pred             CCCchhHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHH
Confidence            999988899999999999999999753211000           0112455677888999988876543      12347


Q ss_pred             HHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecCC
Q 018404          306 RFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE  356 (356)
Q Consensus       306 ~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~  356 (356)
                      ++++++++++++|++++.++++|+++++++||+.+.+++..||+|++++++
T Consensus       295 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~  345 (349)
T 4a27_A          295 GVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT  345 (349)
T ss_dssp             HHHHHHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred             HHHHHHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence            889999999999999999999999999999999999999999999998763

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=5.8e-51  Score=380.97  Aligned_cols=320  Identities=20%  Similarity=0.272  Sum_probs=270.0

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc-CCCCCCCCCCCCCcceecE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF-NQDPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~-~~~~~~~p~v~G~e~~~~G   84 (356)
                      .|.+|||+++.++  |.|.  .+.++  ++|.| +++++||+|||.++|||++|++.+.+ +.....+|.++|||+  +|
T Consensus        19 ~~~~Mka~~~~~~--g~~~--~l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~--~G   89 (354)
T 2j8z_A           19 YFQSMLAVHFDKP--GGPE--NLYVK--EVAKP-SPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEA--SG   89 (354)
T ss_dssp             --CEEEEEEESSC--SSGG--GEEEE--EEECC-CCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEE--EE
T ss_pred             chhheeEEEEccC--CCcc--ceEEe--ecCCC-CCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceee--EE
Confidence            5778999999887  7663  45664  55566 78999999999999999999988773 222334689999995  99


Q ss_pred             EEEEecCCC-CCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEE
Q 018404           85 VAKVVDSGH-PEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYI  160 (356)
Q Consensus        85 ~V~~vG~~v-~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~V  160 (356)
                      +|+++|++| ++|++||+|+++   |+|+||++++++. ++++ |+++++. ++|+++++++|||+++.+.+++++|++|
T Consensus        90 ~V~~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~ls~~-~aa~l~~~~~tA~~al~~~~~~~~g~~v  166 (354)
T 2j8z_A           90 HVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGL-LMPI-PEGLTLT-QAAAIPEAWLTAFQLLHLVGNVQAGDYV  166 (354)
T ss_dssp             EEEEECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTTCCHH-HHTTSHHHHHHHHHHHTTTSCCCTTCEE
T ss_pred             EEEEECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHH-cEEC-CCCCCHH-HHHhccchHHHHHHHHHHhcCCCCCCEE
Confidence            999999999 999999999987   8999999999998 9999 9996555 5788999999999999777899999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccE
Q 018404          161 YVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDI  239 (356)
Q Consensus       161 lI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~  239 (356)
                      +|+||+|++|++++|+++..|++|++++++++++          +.++ ++|++.++|+.+. ++.+.+.+.+.+ ++|+
T Consensus       167 lV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~  234 (354)
T 2j8z_A          167 LIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKL----------QMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNL  234 (354)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEE
T ss_pred             EEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HcCCcEEEecCCh-HHHHHHHHHhcCCCceE
Confidence            9999999999999999999999999999999988          8887 9999999999886 888889888876 8999


Q ss_pred             EEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccch-HHHHhhcceeeceeeecchhh-----HHHHHHHHHH
Q 018404          240 YFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNL-MNVVYKRIRMEGFVVFDYFPQ-----YSRFLDAVLP  313 (356)
Q Consensus       240 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~  313 (356)
                      +|||+|+..+..++++|+++|+++.+|...+..     ...+. ..++.+++++.++........     ..+.++++++
T Consensus       235 vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  309 (354)
T 2j8z_A          235 ILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGD-----INGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILP  309 (354)
T ss_dssp             EEESSCGGGHHHHHHHEEEEEEEEECCCTTCSC-----CCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGG
T ss_pred             EEECCCchHHHHHHHhccCCCEEEEEeccCCCc-----cCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHH
Confidence            999999999999999999999999999754321     12344 567789999998866543211     1233456889


Q ss_pred             HHHcC---CCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEec
Q 018404          314 YIREG---KVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       314 ~~~~g---~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      ++++|   ++++.++++|+|+++++||+.+.+++..||+|++++
T Consensus       310 l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          310 HFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             GGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            99999   999999999999999999999998888899999875

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=4.5e-51  Score=376.86  Aligned_cols=306  Identities=22%  Similarity=0.213  Sum_probs=258.8

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC-----CCCCCCCCCCCcc
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ-----DPDFSSFTPGSPI   80 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~-----~~~~~p~v~G~e~   80 (356)
                      .|++|||+++.++  |+|.  .++++  ++|.| +++++||+|||.++|||++|++.+.+..     ....+|.++|||+
T Consensus         3 ~m~~Mka~~~~~~--g~~~--~l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~   75 (321)
T 3tqh_A            3 AMKEMKAIQFDQF--GPPK--VLKLV--DTPTP-EYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDF   75 (321)
T ss_dssp             --CEEEEEEESSS--CSGG--GEEEE--EEECC-CCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEE
T ss_pred             ccccceEEEEccC--CCcc--eeEEE--ecCCC-CCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCccccee
Confidence            4568999999998  7773  55665  55566 7899999999999999999998876411     2456789999995


Q ss_pred             eecEEEEEecCCCCCCCCCCEEEEc-------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcC
Q 018404           81 EGFGVAKVVDSGHPEFKKGDLVWGT-------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICA  153 (356)
Q Consensus        81 ~~~G~V~~vG~~v~~~~~Gd~V~~~-------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~  153 (356)
                        +|+|+++|+++++|++||+|+++       |+|+||++++++. ++++ |+++++. ++|+++++++|||+++ +.++
T Consensus        76 --~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~  149 (321)
T 3tqh_A           76 --SGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDT-IIQK-LEKLSFL-QAASLPTAGLTALQAL-NQAE  149 (321)
T ss_dssp             --EEEEEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGG-EEEC-CTTSCHH-HHHHSHHHHHHHHHHH-HHTT
T ss_pred             --EEEEEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHH-hccC-CCCCCHH-HHhhhhhHHHHHHHHH-HhcC
Confidence              99999999999999999999875       7899999999999 9999 9996655 6888899999999999 6799


Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCccc-HHHHHHHh
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEND-LDAALKRC  232 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-~~~~~~~~  232 (356)
                      +++|++|+|+||+|++|++++|+|+.+|++|+++++ .+++          +.++ ++|+++++|+++. + +.+.+   
T Consensus       150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~-~~~~----------~~~~-~lGa~~~i~~~~~-~~~~~~~---  213 (321)
T 3tqh_A          150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRNH----------AFLK-ALGAEQCINYHEE-DFLLAIS---  213 (321)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC-HHHH----------HHHH-HHTCSEEEETTTS-CHHHHCC---
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec-cchH----------HHHH-HcCCCEEEeCCCc-chhhhhc---
Confidence            999999999999999999999999999999999985 4556          8888 9999999999886 5 54433   


Q ss_pred             CCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHH
Q 018404          233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVL  312 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  312 (356)
                        +++|++|||+|+..+..++++|+++|+++.+|.....        ........+++++.++....    ..+++++++
T Consensus       214 --~g~D~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  279 (321)
T 3tqh_A          214 --TPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITAG--------RVIEVAKQKHRRAFGLLKQF----NIEELHYLG  279 (321)
T ss_dssp             --SCEEEEEESSCHHHHHHHGGGEEEEEEEEECCSTTHH--------HHHHHHHHTTCEEECCCCCC----CHHHHHHHH
T ss_pred             --cCCCEEEECCCcHHHHHHHHhccCCCEEEEeCCCCch--------hhhhhhhhcceEEEEEecCC----CHHHHHHHH
Confidence              3799999999998779999999999999999863221        12234567788888754322    167899999


Q ss_pred             HHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEec
Q 018404          313 PYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       313 ~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      +++++|++++.++++|+++++++||+.+.+++..||+|++++
T Consensus       280 ~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          280 KLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             HHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HHHHCCCcccccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            999999999999999999999999999999999999999874

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.5e-50  Score=377.49  Aligned_cols=317  Identities=24%  Similarity=0.347  Sum_probs=269.9

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEE
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~   85 (356)
                      +.+|||+++.++  |.|.  .++++ .++|.| +++++||+|||.++|||++|++.+.+. .....+|.++|||+  +|+
T Consensus        27 ~~~Mka~~~~~~--g~~~--~l~~~-~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~--~G~   98 (351)
T 1yb5_A           27 QKLMRAVRVFEF--GGPE--VLKLR-SDIAVP-IPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDV--AGV   98 (351)
T ss_dssp             -CEEEEEEESSC--SSGG--GEEEE-EEEECC-CCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCE--EEE
T ss_pred             cceEEEEEEccC--CCcc--eeEEe-eecCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCcee--EEE
Confidence            346999999987  7663  45551 355666 789999999999999999999887732 22345789999995  899


Q ss_pred             EEEecCCCCCCCCCCEEEEc----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEE
Q 018404           86 AKVVDSGHPEFKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIY  161 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~Vl  161 (356)
                      |+++|+++++|++||+|++.    |+|+||++++++. ++++ |+++++. ++|+++++++|||+++.+.+++++|++|+
T Consensus        99 V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~l~~~-~aA~l~~~~~ta~~al~~~~~~~~g~~vl  175 (351)
T 1yb5_A           99 IEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHT-VYKL-PEKLDFK-QGAAIGIPYFTAYRALIHSACVKAGESVL  175 (351)
T ss_dssp             EEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGG-EEEC-CTTSCHH-HHTTTHHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred             EEEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHH-eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCCCCcCEEE
Confidence            99999999999999999986    8999999999998 9999 9996555 57889999999999998778999999999


Q ss_pred             EecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEE
Q 018404          162 VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIY  240 (356)
Q Consensus       162 I~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~v  240 (356)
                      |+|++|++|++++|+++.+|++|++++++++++          +.++ ++|++.++|+.+. ++.+.+.+.+++ ++|++
T Consensus       176 V~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~----------~~~~-~~ga~~~~d~~~~-~~~~~~~~~~~~~~~D~v  243 (351)
T 1yb5_A          176 VHGASGGVGLAACQIARAYGLKILGTAGTEEGQ----------KIVL-QNGAHEVFNHREV-NYIDKIKKYVGEKGIDII  243 (351)
T ss_dssp             EETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHH-HTTCSEEEETTST-THHHHHHHHHCTTCEEEE
T ss_pred             EECCCChHHHHHHHHHHHCCCEEEEEeCChhHH----------HHHH-HcCCCEEEeCCCc-hHHHHHHHHcCCCCcEEE
Confidence            999999999999999999999999999999988          8888 9999999999876 888888888776 89999


Q ss_pred             EeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHHHHHcCC
Q 018404          241 FEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       241 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~g~  319 (356)
                      |||+|+..+..++++|+++|+++.+|....       ...+...++.+++++.++....+ ++...+.++.+.+++++|+
T Consensus       244 i~~~G~~~~~~~~~~l~~~G~iv~~g~~~~-------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~  316 (351)
T 1yb5_A          244 IEMLANVNLSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGW  316 (351)
T ss_dssp             EESCHHHHHHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTC
T ss_pred             EECCChHHHHHHHHhccCCCEEEEEecCCC-------CccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCC
Confidence            999999889999999999999999996321       12345567789999988765433 3445667788888999999


Q ss_pred             CccceeeeeCCCcHHHHHHH-HHcCCCcceEEEEe
Q 018404          320 VVYVEDVADGLENAPAALVG-LFSGRNVGKQLVVV  353 (356)
Q Consensus       320 l~~~i~~~~~l~~~~~a~~~-~~~~~~~gk~vv~~  353 (356)
                      +++.++++|+|+++++|++. +.++...||+|+.+
T Consensus       317 l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          317 LKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             CCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             ccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999999999999999998 56667789999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=5.3e-52  Score=387.44  Aligned_cols=323  Identities=18%  Similarity=0.206  Sum_probs=267.8

Q ss_pred             CCCCcccccccEEEEe--ecccC-CCCccceEEEEe-------ecccccCCCCCeEEEEEEEeecCHHhhhhhcc-CCCC
Q 018404            1 MAANSEVLSNKQVILK--NYVEG-FPKETDMLVKAS-------SISLKVEEGSNAILVKNLYLSCDPYMRARMSF-NQDP   69 (356)
Q Consensus         1 m~~~~~~~~~~a~~~~--~~~~g-~p~~~~l~~~~~-------~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~-~~~~   69 (356)
                      |++.++|.+|||++++  ++  | .|  ..+++++.       ++|.| +++++||+|||.+++||++|++.+.+ +...
T Consensus         2 Ms~m~~p~~mka~~~~~~~~--~~~~--~~l~~~~~~~~~~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~   76 (349)
T 3pi7_A            2 MSPMTIPSEMKALLLVGDGY--TKTP--SGSALEAMEPYLEQGRIAVP-APGPSQVLIKVNLASINPSDVAFIKGQYGQP   76 (349)
T ss_dssp             ---CCCCSEEEEEEECSCBS--CSSC--CCSCCCCSTTTEEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHTTCSSSC
T ss_pred             CCCCCCchhheEEEEEcccc--CCCc--ccceEEEeecccccccCCCC-CCCCCeEEEEEEEecCCHHHHHHhcccCCCC
Confidence            6777788999999999  54  3 23  33445322       22777 88999999999999999999998873 3334


Q ss_pred             CCCCCCCCCcceecEEEEEecCCC-CCCCCCCEEEEc------cccceeEeecCCCcceeecCCCCCccchhcccCcchH
Q 018404           70 DFSSFTPGSPIEGFGVAKVVDSGH-PEFKKGDLVWGT------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGM  142 (356)
Q Consensus        70 ~~~p~v~G~e~~~~G~V~~vG~~v-~~~~~Gd~V~~~------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~  142 (356)
                      ..+|.++|||+  +|+|+++|++| ++|++||+|++.      |+|+||++++++. ++++ |+++++. ++|++++.++
T Consensus        77 ~~~p~v~G~E~--~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~  151 (349)
T 3pi7_A           77 RVKGRPAGFEG--VGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAA-CIPL-LDTVRDE-DGAAMIVNPL  151 (349)
T ss_dssp             BCTTSBCCSEE--EEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGG-EEEC-CTTCCC---GGGSSHHHH
T ss_pred             CCCCCCccceE--EEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHH-eEEC-CCCCCHH-HHhhccccHH
Confidence            46799999995  99999999999 999999999975      7999999999999 9999 9996665 6888899999


Q ss_pred             HHHHHHHHHcCCCCC-CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCC
Q 018404          143 TAWAGFYEICAPKKG-EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE  221 (356)
Q Consensus       143 tA~~~l~~~~~~~~g-~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~  221 (356)
                      |||+++.. ++ ++| ++|+|+||+|++|++++|+|+.+|++|++++++++++          +.++ ++|+++++|+++
T Consensus       152 ta~~~~~~-~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~----------~~~~-~~Ga~~~~~~~~  218 (349)
T 3pi7_A          152 TAIAMFDI-VK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI----------ALLK-DIGAAHVLNEKA  218 (349)
T ss_dssp             HHHHHHHH-HH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH----------HHHH-HHTCSEEEETTS
T ss_pred             HHHHHHHH-Hh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HcCCCEEEECCc
Confidence            99977754 55 666 7999999999999999999999999999999999998          8998 999999999988


Q ss_pred             cccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccch-HHHHhhcceeeceeeec
Q 018404          222 ENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNL-MNVVYKRIRMEGFVVFD  299 (356)
Q Consensus       222 ~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  299 (356)
                      . ++.+.+++.+++ ++|++|||+|+..+..++++|+++|+++.+|......     ...+. ..++.+++++.+++...
T Consensus       219 ~-~~~~~v~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~  292 (349)
T 3pi7_A          219 P-DFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDPDA-----TVIREPGQLIFQHKHIEGFWLSE  292 (349)
T ss_dssp             T-THHHHHHHHHHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCSCCSC-----CCCSCTHHHHHSCCEEEECCHHH
T ss_pred             H-HHHHHHHHHhcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEeccCCCC-----CCCCchhhhhccccEEEEEEehh
Confidence            6 899999999887 9999999999988899999999999999999754432     22344 67888999999988765


Q ss_pred             ch----hhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          300 YF----PQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       300 ~~----~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +.    ....+.++++++++++|++++.++++|+|+++++||+. .++...||+|+++
T Consensus       293 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          293 WMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             HHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             hhhhCcHHHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence            42    23467889999999999999999999999999999995 4455779999874

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=6.2e-51  Score=379.19  Aligned_cols=312  Identities=16%  Similarity=0.286  Sum_probs=266.7

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC--CCCCCCCCCCCcceec
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ--DPDFSSFTPGSPIEGF   83 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~--~~~~~p~v~G~e~~~~   83 (356)
                      .|.+|||+++.++  |+|    ++++  ++|.| +++++||+|||.+++||++|++.+.+..  ....+|.++|||+  +
T Consensus         4 ~~~~mka~~~~~~--~~~----l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~--~   72 (343)
T 3gaz_A            4 TTPTMIAAVVEEA--NGP----FVLR--KLARP-QPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDL--A   72 (343)
T ss_dssp             --CEEEEEEECST--TCC----EEEE--EEECC-CCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEE--E
T ss_pred             CchhheEEEEecC--CCc----eEEE--eccCC-CCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcce--E
Confidence            3568999999987  665    4554  56666 7899999999999999999998877322  2256789999995  9


Q ss_pred             EEEEEecCCCCCCCCCCEEEEc--------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCC
Q 018404           84 GVAKVVDSGHPEFKKGDLVWGT--------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPK  155 (356)
Q Consensus        84 G~V~~vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~  155 (356)
                      |+|+++|+++++|++||+|+++        |+|+||++++++. ++++ |+++++. ++|+++++++|||+++.+.++++
T Consensus        73 G~V~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~  149 (343)
T 3gaz_A           73 GTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARL-LASK-PAALTMR-QASVLPLVFITAWEGLVDRAQVQ  149 (343)
T ss_dssp             EEEEEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGG-EEEC-CTTSCHH-HHHTSHHHHHHHHHHHTTTTCCC
T ss_pred             EEEEEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHH-eeeC-CCCCCHH-HHHHhhhhHHHHHHHHHHhcCCC
Confidence            9999999999999999999976        7999999999999 9999 9996655 68888999999999997788999


Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      +|++|||+||+|++|++++|+|+.+|++|+++ .+++++          +.++ ++|++. +| .+. ++.+.+.+.+++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~----------~~~~-~lGa~~-i~-~~~-~~~~~~~~~~~~  214 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL----------EYVR-DLGATP-ID-ASR-EPEDYAAEHTAG  214 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH----------HHHH-HHTSEE-EE-TTS-CHHHHHHHHHTT
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH----------HHHH-HcCCCE-ec-cCC-CHHHHHHHHhcC
Confidence            99999999999999999999999999999999 788887          8888 999988 77 554 888899998887


Q ss_pred             -CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc------hhhHHHHH
Q 018404          236 -GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY------FPQYSRFL  308 (356)
Q Consensus       236 -~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l  308 (356)
                       ++|++|||+|+..+..++++|+++|+++.+|...         ..+...++.+++++.+++....      +....+++
T Consensus       215 ~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  285 (343)
T 3gaz_A          215 QGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWG---------THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEML  285 (343)
T ss_dssp             SCEEEEEESSCTHHHHHHHHHEEEEEEEEESCCCS---------CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHH
T ss_pred             CCceEEEECCCcHHHHHHHHHHhcCCeEEEEcccC---------ccccchhhhcCcEEEEEEeccchhcccchHHHHHHH
Confidence             9999999999999999999999999999998743         1244567789999988654321      23345889


Q ss_pred             HHHHHHHHcCCCcccee-eeeCCCcHHHHHHHHHcCCC----cceEEEEecC
Q 018404          309 DAVLPYIREGKVVYVED-VADGLENAPAALVGLFSGRN----VGKQLVVVSR  355 (356)
Q Consensus       309 ~~~~~~~~~g~l~~~i~-~~~~l~~~~~a~~~~~~~~~----~gk~vv~~~~  355 (356)
                      +++++++++|++++.++ ++|+|+++++||+.+.+++.    .||+|++++.
T Consensus       286 ~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~  337 (343)
T 3gaz_A          286 READALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEG  337 (343)
T ss_dssp             HHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC-
T ss_pred             HHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEecc
Confidence            99999999999999999 79999999999999988765    6899998864

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=4.8e-50  Score=377.49  Aligned_cols=316  Identities=16%  Similarity=0.181  Sum_probs=265.0

Q ss_pred             CCCCcccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcc
Q 018404            1 MAANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPI   80 (356)
Q Consensus         1 m~~~~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~   80 (356)
                      |..++.|++|||+++.++  |++    ++++  ++|.| +++++||+|||.+++||++|++.+.+... ..+|.++|||+
T Consensus         1 ~~~~~~p~~mka~~~~~~--g~~----l~~~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~   70 (373)
T 1p0f_A            1 MCTAGKDITCKAAVAWEP--HKP----LSLE--TITVA-PPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEA   70 (373)
T ss_dssp             -CCTTSCEEEEEEEBSST--TSC----CEEE--EEEEC-CCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCE
T ss_pred             CcccCCcceeEEEEEEcC--CCC----eeEE--EeeCC-CCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCc
Confidence            777888999999999886  554    5665  45556 78999999999999999999998874322 45789999996


Q ss_pred             eecEEEEEecCCCCCCCCCCEEEEc---------------------------------------------------cccc
Q 018404           81 EGFGVAKVVDSGHPEFKKGDLVWGT---------------------------------------------------TGWE  109 (356)
Q Consensus        81 ~~~G~V~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~  109 (356)
                        +|+|+++|++|++|++||+|++.                                                   |+|+
T Consensus        71 --~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~a  148 (373)
T 1p0f_A           71 --VGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFT  148 (373)
T ss_dssp             --EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSB
T ss_pred             --eEEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccce
Confidence              99999999999999999999853                                                   7899


Q ss_pred             eeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEe
Q 018404          110 EYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSA  188 (356)
Q Consensus       110 ~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~  188 (356)
                      ||++++++. ++++ |+++++  ++|++++++.|||+++.+.+++++|++|||+| +|++|++++|+|+.+|+ +|++++
T Consensus       149 ey~~v~~~~-~~~i-P~~l~~--~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~  223 (373)
T 1p0f_A          149 EYTVVADIA-VAKI-DPKAPL--ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVG  223 (373)
T ss_dssp             SEEEEETTS-EEEE-CTTCCG--GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             eEEEEchhh-EEEC-CCCCCh--hhhhhhhHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEC
Confidence            999999999 9999 999655  46677889999999997778999999999999 69999999999999999 899999


Q ss_pred             CCcchhccccchhHHHHHHHhhcCCCEEEecCC-cccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEE
Q 018404          189 GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE-ENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAAC  265 (356)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~  265 (356)
                      ++++++          +.++ ++|+++++|+++ ..++.+.+++.+++++|+||||+|+ ..+..++++|+++ |+++.+
T Consensus       224 ~~~~~~----------~~a~-~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  292 (373)
T 1p0f_A          224 THKDKF----------PKAI-ELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVL  292 (373)
T ss_dssp             SCGGGH----------HHHH-HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred             CCHHHH----------HHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEE
Confidence            999998          8998 999999999874 1278889999887799999999998 7899999999999 999999


Q ss_pred             ccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcC
Q 018404          266 GMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSG  343 (356)
Q Consensus       266 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~  343 (356)
                      |.....    .....+...++.++ ++.++....+.   .++++++++++++|+++  +.++++|+|+++++||+.+.++
T Consensus       293 G~~~~~----~~~~~~~~~~~~~~-~i~g~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~  364 (373)
T 1p0f_A          293 GLASPN----ERLPLDPLLLLTGR-SLKGSVFGGFK---GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSG  364 (373)
T ss_dssp             CCCCTT----CCEEECTHHHHTTC-EEEECSGGGCC---GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTS
T ss_pred             ccCCCC----CccccCHHHhccCc-eEEeeccCCcC---HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCC
Confidence            974321    11223445566677 88877554321   25688999999999987  5678999999999999999877


Q ss_pred             CCcceEEEEe
Q 018404          344 RNVGKQLVVV  353 (356)
Q Consensus       344 ~~~gk~vv~~  353 (356)
                      +. +|+|+++
T Consensus       365 ~~-~kvvi~~  373 (373)
T 1p0f_A          365 QG-VRSIMIY  373 (373)
T ss_dssp             SC-SEEEEEC
T ss_pred             Cc-ceEEEeC
Confidence            64 7999874

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=3.3e-50  Score=374.06  Aligned_cols=306  Identities=21%  Similarity=0.277  Sum_probs=266.9

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC-CCCCCCCCCCCcceecEEEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ-DPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~-~~~~~p~v~G~e~~~~G~V~   87 (356)
                      +|||++++++  |+|    ++++  ++|.| +++++||+|||.+++||++|++.+.+.. ....+|.++|||+  +|+|+
T Consensus         2 ~MkA~~~~~~--g~~----l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~--~G~V~   70 (340)
T 3s2e_A            2 MMKAAVVRAF--GAP----LTID--EVPVP-QPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEG--VGYVS   70 (340)
T ss_dssp             EEEEEEBCST--TSC----CEEE--EEECC-CCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEE--EEEEE
T ss_pred             ceEEEEEecC--CCC----CEEE--EccCC-CCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcc--eEEEE
Confidence            5899999987  665    5665  55566 7899999999999999999999888432 3356799999995  99999


Q ss_pred             EecCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCCCCccchhcc
Q 018404           88 VVDSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGI  136 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~  136 (356)
                      ++|+++++|++||+|+.                               .|+|+||++++++. ++++ |+++++. ++|+
T Consensus        71 ~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~  147 (340)
T 3s2e_A           71 AVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNY-VGLL-PDKVGFV-EIAP  147 (340)
T ss_dssp             EECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTT-SEEC-CTTSCHH-HHGG
T ss_pred             EECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHH-EEEC-CCCCCHH-Hhhc
Confidence            99999999999999942                               28999999999999 9999 9996665 6888


Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +++++.|||+++ +..++++|++|||+| +|++|++++|+|+.+|++|++++++++++          +.++ ++|++++
T Consensus       148 l~~~~~ta~~~l-~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~----------~~~~-~lGa~~~  214 (340)
T 3s2e_A          148 ILCAGVTVYKGL-KVTDTRPGQWVVISG-IGGLGHVAVQYARAMGLRVAAVDIDDAKL----------NLAR-RLGAEVA  214 (340)
T ss_dssp             GGTHHHHHHHHH-HTTTCCTTSEEEEEC-CSTTHHHHHHHHHHTTCEEEEEESCHHHH----------HHHH-HTTCSEE
T ss_pred             ccchhHHHHHHH-HHcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCCHHHH----------HHHH-HcCCCEE
Confidence            999999999999 567999999999999 59999999999999999999999999998          8898 9999999


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeece
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGF  295 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (356)
                      +|+++. ++.+.+++ +.+++|++||++|+ ..+..++++|+++|+++.+|...+      ....+...++.+++++.++
T Consensus       215 i~~~~~-~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~  286 (340)
T 3s2e_A          215 VNARDT-DPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG------DFGTPIFDVVLKGITIRGS  286 (340)
T ss_dssp             EETTTS-CHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS------EEEEEHHHHHHTTCEEEEC
T ss_pred             EeCCCc-CHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC------CCCCCHHHHHhCCeEEEEE
Confidence            999886 88888888 44489999999987 789999999999999999987432      2334567788899999998


Q ss_pred             eeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          296 VVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       296 ~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      ....     .++++++++++++|++++.++ .++|+++++||+.+.+++..||+|+++++
T Consensus       287 ~~~~-----~~~~~~~~~l~~~g~l~~~~~-~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          287 IVGT-----RSDLQESLDFAAHGDVKATVS-TAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             CSCC-----HHHHHHHHHHHHTTSCCCCEE-EECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             ecCC-----HHHHHHHHHHHHhCCCCceEE-EEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            7766     678999999999999998654 67999999999999999999999999864

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=1.1e-50  Score=379.61  Aligned_cols=320  Identities=19%  Similarity=0.252  Sum_probs=264.3

Q ss_pred             cccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceec
Q 018404            5 SEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGF   83 (356)
Q Consensus         5 ~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~   83 (356)
                      +||.+|||+++.++  |.|. +.+.+  .++|.| +++++||+|||.++|||++|++.+.+. .....+|.++|||+  +
T Consensus        22 ~m~~~mka~~~~~~--g~~~-~~l~~--~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~--~   93 (357)
T 1zsy_A           22 SMPARVRALVYGHH--GDPA-KVVEL--KNLELA-AVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEG--V   93 (357)
T ss_dssp             CCCCCEEEEEESSS--SCHH-HHEEE--EEECCC-CCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCC--E
T ss_pred             hCchhhEEEEEecC--CCcc-ceEEE--eeccCC-CCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceE--E
Confidence            46778999999987  7652 22455  456666 789999999999999999999988732 22234689999996  9


Q ss_pred             EEEEEecCCCCCCCCCCEEEEc----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCE
Q 018404           84 GVAKVVDSGHPEFKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEY  159 (356)
Q Consensus        84 G~V~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~  159 (356)
                      |+|+++|+++++|++||+|++.    |+|+||++++++. ++++ |+++++. ++|+++++++|||+++.+.+++++|++
T Consensus        94 G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~i-P~~l~~~-~Aa~l~~~~~ta~~~l~~~~~~~~g~~  170 (357)
T 1zsy_A           94 AQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEA-LIQV-PSDIPLQ-SAATLGVNPCTAYRMLMDFEQLQPGDS  170 (357)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGG-EEEE-CSSSCHH-HHHHTTSHHHHHHHHHHHSSCCCTTCE
T ss_pred             EEEEEeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHH-cEEC-CCCCCHH-HHhhhcccHHHHHHHHHHHhccCCCCE
Confidence            9999999999999999999976    8999999999999 9999 9996655 688888899999999988789999999


Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc----hhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE----KVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      |||+||+|++|++++|+||.+|+++++++++.+    ++          +.++ ++|+++++|+++.  ..+.+.+.+.+
T Consensus       171 VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----------~~~~-~lGa~~vi~~~~~--~~~~~~~~~~~  237 (357)
T 1zsy_A          171 VIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLS----------DRLK-SLGAEHVITEEEL--RRPEMKNFFKD  237 (357)
T ss_dssp             EEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHH----------HHHH-HTTCSEEEEHHHH--HSGGGGGTTSS
T ss_pred             EEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHH----------HHHH-hcCCcEEEecCcc--hHHHHHHHHhC
Confidence            999999999999999999999999998887644    34          6777 9999999987531  22345566554


Q ss_pred             --CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-----hhhHHHHH
Q 018404          236 --GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-----FPQYSRFL  308 (356)
Q Consensus       236 --~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l  308 (356)
                        ++|+||||+|+.....++++++++|+++.+|...+.+     ...+...++.+++++.+++...+     +....+.+
T Consensus       238 ~~~~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  312 (357)
T 1zsy_A          238 MPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQP-----VVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELI  312 (357)
T ss_dssp             SCCCSEEEESSCHHHHHHHHTTSCTTCEEEECCCCTTCC-----BCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHH
T ss_pred             CCCceEEEECCCcHHHHHHHHhhCCCCEEEEEecCCCCC-----CCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHH
Confidence              5999999999977778999999999999998644321     22345567789999999876543     22345678


Q ss_pred             HHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          309 DAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       309 ~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +++++++++|++++.+.++|+|+++++||+.+.+++..||+|+++
T Consensus       313 ~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          313 LTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            999999999999998888999999999999999888889999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.9e-50  Score=378.46  Aligned_cols=317  Identities=18%  Similarity=0.176  Sum_probs=268.3

Q ss_pred             ccccccEEEEeecccCC-CCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecE
Q 018404            6 EVLSNKQVILKNYVEGF-PKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~-p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G   84 (356)
                      .|++|||+++.++  |. ..+..++++  ++|.| +++++||+|||.+++||++|++.+.+......+|.++|||+  +|
T Consensus        19 ~m~~MkA~~~~~~--~~~~~~~~l~~~--~~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~--~G   91 (363)
T 4dvj_A           19 YFQSMKAVGYNKP--APITDDASLLDI--ELPKP-APAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDA--AG   91 (363)
T ss_dssp             CCCEEEEEEBSSC--CCTTSTTSSEEE--EEECC-CCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCE--EE
T ss_pred             hhheeEEEEEecc--CCCCCCceEEEe--ecCCC-CCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCccccee--EE
Confidence            4678999999886  43 122456664  55666 78999999999999999999998875444457789999995  99


Q ss_pred             EEEEecCCCCCCCCCCEEEEc------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCC---
Q 018404           85 VAKVVDSGHPEFKKGDLVWGT------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPK---  155 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~---  155 (356)
                      +|+++|++|++|++||+|+++      |+|+||++++++. ++++ |+++++. ++|+++++++|||+++.+.++++   
T Consensus        92 ~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~  168 (363)
T 4dvj_A           92 IVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERI-VGRK-PKTLDWA-EAAALPLTSITAWEAFFDRLDVNKPV  168 (363)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGG-CEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCTTSCC
T ss_pred             EEEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHH-eeEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCcCcCc
Confidence            999999999999999999985      7999999999998 9999 9996665 68888999999999998888888   


Q ss_pred             --CCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHh
Q 018404          156 --KGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 --~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  232 (356)
                        +|++|||+||+|++|++++|+|+.+ |++|++++++++++          +.++ ++|+++++|+.+  ++.+.+++.
T Consensus       169 ~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~----------~~~~-~lGad~vi~~~~--~~~~~v~~~  235 (363)
T 4dvj_A          169 PGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ----------EWVK-SLGAHHVIDHSK--PLAAEVAAL  235 (363)
T ss_dssp             TTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH----------HHHH-HTTCSEEECTTS--CHHHHHHTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH----------HHHH-HcCCCEEEeCCC--CHHHHHHHh
Confidence              8999999999999999999999985 89999999999998          9998 999999999875  788888888


Q ss_pred             CCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-------hhhH
Q 018404          233 FPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-------FPQY  304 (356)
Q Consensus       233 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  304 (356)
                      .++++|+||||+|+ ..+..++++|+++|+++.+|...         ..+...+..+++++.++.....       ....
T Consensus       236 ~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~  306 (363)
T 4dvj_A          236 GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS---------AFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQ  306 (363)
T ss_dssp             CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCCS---------SCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHH
T ss_pred             cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCCC---------ccchHHHhhccceEEEEEeeccccccCcchhhH
Confidence            55599999999998 58899999999999999996521         1334456678888877554321       1123


Q ss_pred             HHHHHHHHHHHHcCCCccceeeee---CCCcHHHHHHHHHcCCCcceEEEEec
Q 018404          305 SRFLDAVLPYIREGKVVYVEDVAD---GLENAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       305 ~~~l~~~~~~~~~g~l~~~i~~~~---~l~~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      .+.++++++++++|++++.++.++   +++++++||+.+.+++..||+|+++.
T Consensus       307 ~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          307 GRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGF  359 (363)
T ss_dssp             HHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred             HHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCc
Confidence            578999999999999999988776   99999999999999999999999874

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=2.2e-50  Score=374.17  Aligned_cols=317  Identities=18%  Similarity=0.251  Sum_probs=269.1

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC--CC-CCCCCCCCCcceecEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ--DP-DFSSFTPGSPIEGFGVA   86 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~--~~-~~~p~v~G~e~~~~G~V   86 (356)
                      |||+++.++  |.|.  .+++  .++|.| +++++||+|||.++|||++|++.+.+..  .. ..+|.++|||+  +|+|
T Consensus         2 Mka~~~~~~--g~~~--~l~~--~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~--~G~V   72 (333)
T 1wly_A            2 VMAAVIHKK--GGPD--NFVW--EEVKVG-SPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEA--AAVV   72 (333)
T ss_dssp             CEEEEESSC--SSGG--GEEE--EECCCC-CCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEE--EEEE
T ss_pred             cEEEEEccc--CCcc--eeEE--EeccCC-CCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCcccccee--EEEE
Confidence            799999987  7663  4555  466777 7899999999999999999999877422  11 35789999995  9999


Q ss_pred             EEecCCCCCCCCCCEEEE----ccccceeEeecCCCcceeecCCCCCccch--hcccCcchHHHHHHHHHHcCCCCCCEE
Q 018404           87 KVVDSGHPEFKKGDLVWG----TTGWEEYSLIKNPQGLFKIHHTDVPLSYY--TGILGMPGMTAWAGFYEICAPKKGEYI  160 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~----~g~~~~~~~v~~~~~l~~~~p~~~~~~~~--~a~l~~~~~tA~~~l~~~~~~~~g~~V  160 (356)
                      +++|+++++|++||+|++    .|+|+||++++++. ++++ |+++++. +  +|+++++++|||+++.+.+++++|++|
T Consensus        73 ~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  149 (333)
T 1wly_A           73 EEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEK-LIKV-PKDLDLD-DVHLAGLMLKGMTAQYLLHQTHKVKPGDYV  149 (333)
T ss_dssp             EEECTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGG-CEEC-CTTCCCC-HHHHHHHHHHHHHHHHHHHTTSCCCTTCEE
T ss_pred             EEECCCCCCCCCCCEEEEecCCCCcceeEEEecHHH-cEeC-CCCCChH-HhCccchhhhHHHHHHHHHHhhCCCCCCEE
Confidence            999999999999999987    48999999999998 9999 9996665 6  789999999999999877899999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccE
Q 018404          161 YVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDI  239 (356)
Q Consensus       161 lI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~  239 (356)
                      +|+||+|++|++++|+++.+|++|++++++++++          +.++ ++|++.++|+.+. ++.+.+.+.+.+ ++|+
T Consensus       150 lV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~----------~~~~-~~g~~~~~d~~~~-~~~~~i~~~~~~~~~d~  217 (333)
T 1wly_A          150 LIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA----------ETAR-KLGCHHTINYSTQ-DFAEVVREITGGKGVDV  217 (333)
T ss_dssp             EETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHH----------HHHH-HHTCSEEEETTTS-CHHHHHHHHHTTCCEEE
T ss_pred             EEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HcCCCEEEECCCH-HHHHHHHHHhCCCCCeE
Confidence            9999999999999999999999999999998888          8888 8999999998876 888888888766 8999


Q ss_pred             EEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchH-HHHhhc--ceeeceeeecc--hhhHHHHHHHHHHH
Q 018404          240 YFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLM-NVVYKR--IRMEGFVVFDY--FPQYSRFLDAVLPY  314 (356)
Q Consensus       240 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~--~~~~~~~l~~~~~~  314 (356)
                      +|||+|+..+..++++|+++|+++.+|...+..     ...+.. .++.++  +++.|+....+  +....+.+++++++
T Consensus       218 vi~~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l  292 (333)
T 1wly_A          218 VYDSIGKDTLQKSLDCLRPRGMCAAYGHASGVA-----DPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDA  292 (333)
T ss_dssp             EEECSCTTTHHHHHHTEEEEEEEEECCCTTCCC-----CCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHH
T ss_pred             EEECCcHHHHHHHHHhhccCCEEEEEecCCCCc-----CCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999754321     123344 566788  88888754211  33345689999999


Q ss_pred             HHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          315 IREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       315 ~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      +++|++++.++++|+|+++++||+.+.+++..||+|+.+++
T Consensus       293 ~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          293 VKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             HHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             HHCCCcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            99999999999999999999999999998888999998754

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=9.5e-50  Score=372.15  Aligned_cols=306  Identities=17%  Similarity=0.203  Sum_probs=264.7

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++...  +..   .+++  .++|.| +|+||||||||.++|||++|++.+++.. ...+|.++|||+  +|+|+++
T Consensus         1 MKA~v~~~~--~~~---~~~l--~e~~~P-~~~p~eVLVkv~a~gic~~D~~~~~G~~-~~~~p~i~GhE~--aG~V~~v   69 (348)
T 4eez_A            1 MKAAVVRHN--PDG---YADL--VEKELR-AIKPNEALLDMEYCGVCHTDLHVAAGDF-GNKAGTVLGHEG--IGIVKEI   69 (348)
T ss_dssp             CEEEEECSS--CCS---SEEE--EECCCC-CCCTTEEEEEEEEEECCHHHHHHHTTTT-CCCTTCBCCSEE--EEEEEEE
T ss_pred             CeEEEEEcC--CCC---cEEE--EEeECC-CCCCCEEEEEEEEEEECHHHHHHhcCCC-CCCCCcccceeE--EEEEEEE
Confidence            789998654  222   2455  466666 8899999999999999999999887432 346789999995  9999999


Q ss_pred             cCCCCCCCCCCEEEEc-------------------------------cccceeEeecCCCcceeecCCCCCccchhcccC
Q 018404           90 DSGHPEFKKGDLVWGT-------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILG  138 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~  138 (356)
                      |++|++|++||+|++.                               |+|+||++++++. ++++ |+++++. ++++++
T Consensus        70 G~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~-~~~i-P~~~~~~-~aa~l~  146 (348)
T 4eez_A           70 GADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADY-AVKV-PDGLDPI-EASSIT  146 (348)
T ss_dssp             CTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-SCBC-CTTSCHH-HHHHHH
T ss_pred             CceeeecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccc-eeec-CCCCCHH-HHhhcc
Confidence            9999999999999752                               7899999999999 9999 9996555 688999


Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE
Q 018404          139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF  217 (356)
Q Consensus       139 ~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv  217 (356)
                      ++++|||+++. ..++++|++|+|+| +|++|.+++|+++.+ |++|++++++++++          +.++ ++|+++++
T Consensus       147 ~~~~ta~~~l~-~~~~~~g~~VlV~G-aG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~----------~~~~-~~Ga~~~i  213 (348)
T 4eez_A          147 CAGVTTYKAIK-VSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVDINQDKL----------NLAK-KIGADVTI  213 (348)
T ss_dssp             HHHHHHHHHHH-HHTCCTTCEEEEEC-CSHHHHHHHHHHHHTSCCEEEEEESCHHHH----------HHHH-HTTCSEEE
T ss_pred             cceeeEEeeec-ccCCCCCCEEEEEc-CCCccHHHHHHHHHhCCCEEEEEECcHHHh----------hhhh-hcCCeEEE
Confidence            99999999995 57899999999999 689999999999876 77999999999998          8888 99999999


Q ss_pred             ecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeece
Q 018404          218 NYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGF  295 (356)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (356)
                      |+++. ++.+.+++.+++ ++|.+++++++ ..+..++++++++|+++.+|....      ....+...++.+++++.|+
T Consensus       214 ~~~~~-~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~gs  286 (348)
T 4eez_A          214 NSGDV-NPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNT------EMTLSVPTVVFDGVEVAGS  286 (348)
T ss_dssp             EC-CC-CHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSC------EEEECHHHHHHSCCEEEEC
T ss_pred             eCCCC-CHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCC------CCccCHHHHHhCCeEEEEE
Confidence            99987 899999999998 99999999998 788999999999999999987432      2345667788999999998


Q ss_pred             eeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          296 VVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       296 ~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      ...+     .++++++++++++|++++.+ ++|+|+++++||+.+.+++..||+||+|++
T Consensus       287 ~~~~-----~~~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          287 LVGT-----RLDLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             CSCC-----HHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             ecCC-----HHHHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence            7766     67799999999999999765 689999999999999999999999999875

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=1.4e-49  Score=372.61  Aligned_cols=327  Identities=23%  Similarity=0.342  Sum_probs=273.6

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC-CCCCCCCCCCCcceecE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ-DPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~-~~~~~p~v~G~e~~~~G   84 (356)
                      ++.+|||+++.++  |.+-.+.+++. .++|.| +++++||+|||.++|||++|++.+.+.. ....+|.++|||+  +|
T Consensus        20 ~~~~MkA~~~~~~--g~~~~~~l~~~-~~~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~--~G   93 (362)
T 2c0c_A           20 FQSMMQKLVVTRL--SPNFREAVTLS-RDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEG--IG   93 (362)
T ss_dssp             HCCEEEEEEECSC--CSSHHHHEEEE-EEEECC-CCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEE--EE
T ss_pred             chhhceEEEEeec--CCCccceeEEE-eecCCC-CCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCcee--EE
Confidence            4668999999987  65311345551 355666 7899999999999999999999877432 2345789999995  99


Q ss_pred             EEEEecCCCC-CCCCCCEEEEc--cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEE
Q 018404           85 VAKVVDSGHP-EFKKGDLVWGT--TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIY  161 (356)
Q Consensus        85 ~V~~vG~~v~-~~~~Gd~V~~~--g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~Vl  161 (356)
                      +|+++|++|+ +|++||+|++.  |+|+||++++++. ++++ |++  .. ++|+++++++|||+++.+.+++++|++||
T Consensus        94 ~V~~vG~~V~~~~~vGdrV~~~~~G~~aey~~v~~~~-~~~~-P~~--~~-~aaal~~~~~ta~~al~~~~~~~~g~~Vl  168 (362)
T 2c0c_A           94 EVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASI-ATPV-PSV--KP-EYLTLLVSGTTAYISLKELGGLSEGKKVL  168 (362)
T ss_dssp             EEEEECTTGGGTCCTTCEEEEECSCCSBSEEEEEGGG-CEEC-SSS--CH-HHHTTTTHHHHHHHHHHHHTCCCTTCEEE
T ss_pred             EEEEECCCccCCCCCCCEEEEccCCcceeEEEEcHHH-eEEC-CCC--ch-HhhcccchHHHHHHHHHHhcCCCCCCEEE
Confidence            9999999999 99999999986  8999999999998 9999 886  33 67889999999999998888999999999


Q ss_pred             EecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEE
Q 018404          162 VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYF  241 (356)
Q Consensus       162 I~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vi  241 (356)
                      |+||+|++|++++|+|+.+|++|++++++++++          +.++ ++|++.++|+++. ++.+.+++.+++++|++|
T Consensus       169 V~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~----------~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~g~D~vi  236 (362)
T 2c0c_A          169 VTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS----------AFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVY  236 (362)
T ss_dssp             ETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH----------HHHH-HTTCSEEEETTTS-CHHHHHHHHCTTCEEEEE
T ss_pred             EeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH----------HHHH-HcCCcEEEecCCh-hHHHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999988          8888 8999999999876 888888888755899999


Q ss_pred             eCCCchHHHHHHHhhccCCeEEEEccccccCCCCC--cc--ccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHc
Q 018404          242 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP--EG--VHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIRE  317 (356)
Q Consensus       242 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  317 (356)
                      ||+|+..+..++++|+++|+++.+|...+......  ..  ......++.+++++.++....+.....++++++++++++
T Consensus       237 d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~  316 (362)
T 2c0c_A          237 ESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVS  316 (362)
T ss_dssp             ECSCTHHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHT
T ss_pred             ECCCHHHHHHHHHHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHC
Confidence            99999999999999999999999998654311000  00  011356778999999887665544457789999999999


Q ss_pred             CCCcccee--------eeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          318 GKVVYVED--------VADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       318 g~l~~~i~--------~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      |++++.+.        ..++|+++++|++.+.+++..||+|+.+++
T Consensus       317 g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          317 GDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             TCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             CCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            99998754        567999999999999998888999998753

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=3.5e-50  Score=377.25  Aligned_cols=321  Identities=17%  Similarity=0.238  Sum_probs=263.7

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCC---------CCC
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSS---------FTP   76 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p---------~v~   76 (356)
                      |++|||++++++  |.|. +.+++++.++|.| .++++||+|||.++|||++|++.+.+. .....+|         .++
T Consensus         1 ~~~mka~~~~~~--g~~~-~~l~~~~~~~P~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~   76 (364)
T 1gu7_A            1 MITAQAVLYTQH--GEPK-DVLFTQSFEIDDD-NLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPC   76 (364)
T ss_dssp             CEEEEEEEESSC--SCHH-HHCEEEEEEECTT-SCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEEC
T ss_pred             CceEEEEEeccC--CCch-heeEEeeccCCCC-CCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCccccc
Confidence            467999999987  6641 2356765555433 234999999999999999999988732 2222345         899


Q ss_pred             CCcceecEEEEEecCCCCCCCCCCEEEEc----cccceeEeecCCCcceeecCC-----------CCCccchhcccCcch
Q 018404           77 GSPIEGFGVAKVVDSGHPEFKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHT-----------DVPLSYYTGILGMPG  141 (356)
Q Consensus        77 G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~-----------~~~~~~~~a~l~~~~  141 (356)
                      |||+  +|+|+++|++|++|++||+|++.    |+|+||++++++. ++++ |+           ++++. ++|++++++
T Consensus        77 G~E~--~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~~~~~~~~~~~~-~aa~l~~~~  151 (364)
T 1gu7_A           77 GNEG--LFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD-FIKL-PNPAQSKANGKPNGLTIN-QGATISVNP  151 (364)
T ss_dssp             CSCC--EEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGG-EEEE-CCHHHHHHTTCSCCCCHH-HHHTCTTHH
T ss_pred             Ccee--EEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHH-eEEc-CCccccccccccCCCCHH-HHhhccccH
Confidence            9996  99999999999999999999976    8999999999998 9999 87           75554 688889999


Q ss_pred             HHHHHHHHHHcCCCCC-CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch----hccccchhHHHHHHHhhcCCCEE
Q 018404          142 MTAWAGFYEICAPKKG-EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK----VWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       142 ~tA~~~l~~~~~~~~g-~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +|||+++.+.+++++| ++|||+|++|++|++++|+|+.+|++|++++++.++    .          +.++ ++|++++
T Consensus       152 ~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----------~~~~-~lGa~~v  220 (364)
T 1gu7_A          152 LTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV----------ASLK-ELGATQV  220 (364)
T ss_dssp             HHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH----------HHHH-HHTCSEE
T ss_pred             HHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHH----------HHHH-hcCCeEE
Confidence            9999999876789999 999999999999999999999999999999977665    4          6777 9999999


Q ss_pred             EecCC---cccHHHHHHHhC--CC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcc
Q 018404          217 FNYKE---ENDLDAALKRCF--PE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRI  290 (356)
Q Consensus       217 v~~~~---~~~~~~~~~~~~--~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  290 (356)
                      +|+++   . ++.+.+++.+  ++ ++|+||||+|+.....++++|+++|+++.+|...+.     ....+...++.+++
T Consensus       221 i~~~~~~~~-~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~  294 (364)
T 1gu7_A          221 ITEDQNNSR-EFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIFKNF  294 (364)
T ss_dssp             EEHHHHHCG-GGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHHSCC
T ss_pred             EecCccchH-HHHHHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCC-----CcccCHHHHhhcCc
Confidence            99875   4 7788888887  44 899999999997666899999999999999975432     12244556778999


Q ss_pred             eeeceeeecc----hhhHHHHHHHHHHHHHcCCCccceeeeeCC---CcHHHHHHHHHcCCCcceEEEEe
Q 018404          291 RMEGFVVFDY----FPQYSRFLDAVLPYIREGKVVYVEDVADGL---ENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       291 ~~~~~~~~~~----~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l---~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++.++....+    +....+.++++++++++|++++.+..++++   +++++||+.+.+++..||+|+++
T Consensus       295 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          295 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             EEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            9998876543    222357899999999999999876666665   59999999999888889999975

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-49  Score=373.52  Aligned_cols=313  Identities=18%  Similarity=0.213  Sum_probs=266.4

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      .+++|||+++.++  |.+    ++++  ++|.| +++++||+|||.+++||++|++.+.+.. ...+|.++|||+  +|+
T Consensus         3 ~~~~mka~~~~~~--g~~----l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~-~~~~P~v~GhE~--~G~   70 (371)
T 1f8f_A            3 ELKDIIAAVTPCK--GAD----FELQ--ALKIR-QPQGDEVLVKVVATGMCHTDLIVRDQKY-PVPLPAVLGHEG--SGI   70 (371)
T ss_dssp             -CEEEEEEEBCST--TCC----CEEE--EEEEC-CCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSBCCCCEE--EEE
T ss_pred             ccccceEEEEcCC--CCC----eEEE--EecCC-CCCCCEEEEEEEEeecCchhHHHHcCCC-CCCCCcccCccc--ceE
Confidence            6778999999887  654    5665  55556 7899999999999999999999887432 245689999995  999


Q ss_pred             EEEecCCCCCCCCCCEEEE----------------------------------------------------ccccceeEe
Q 018404           86 AKVVDSGHPEFKKGDLVWG----------------------------------------------------TTGWEEYSL  113 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~----------------------------------------------------~g~~~~~~~  113 (356)
                      |+++|++|++|++||+|++                                                    .|+|+||++
T Consensus        71 V~~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~  150 (371)
T 1f8f_A           71 IEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYAL  150 (371)
T ss_dssp             EEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEE
T ss_pred             EEEeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEE
Confidence            9999999999999999985                                                    178999999


Q ss_pred             ecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcc
Q 018404          114 IKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSRE  192 (356)
Q Consensus       114 v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~  192 (356)
                      ++++. ++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+| +|++|++++|+|+.+|+ +|++++++++
T Consensus       151 v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~~Vi~~~~~~~  226 (371)
T 1f8f_A          151 SRENN-TVKV-TKDVPIE-LLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDIVES  226 (371)
T ss_dssp             EEGGG-EEEE-CTTSCGG-GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEESCHH
T ss_pred             echhh-eEEC-CCCCCHH-HHHHhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHH
Confidence            99999 9999 9996665 67888999999999997778999999999999 69999999999999999 7999999999


Q ss_pred             hhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEcccccc
Q 018404          193 KVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQY  271 (356)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~  271 (356)
                      ++          +.++ ++|+++++|+++. ++.+.+++.+++++|+||||+|+ ..+..++++|+++|+++.+|.....
T Consensus       227 ~~----------~~a~-~lGa~~vi~~~~~-~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~  294 (371)
T 1f8f_A          227 RL----------ELAK-QLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG  294 (371)
T ss_dssp             HH----------HHHH-HHTCSEEEETTTS-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT
T ss_pred             HH----------HHHH-HcCCCEEecCCcc-CHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCC
Confidence            98          8888 9999999999876 88889999887799999999998 7889999999999999999975421


Q ss_pred             CCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc--ceeeeeCCCcHHHHHHHHHcCCCcceE
Q 018404          272 NLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY--VEDVADGLENAPAALVGLFSGRNVGKQ  349 (356)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~--~i~~~~~l~~~~~a~~~~~~~~~~gk~  349 (356)
                          .....+...++.+++++.++....+.  ..++++++++++++|++++  .+++ |+|+++++||+.+.+++. +|+
T Consensus       295 ----~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kv  366 (371)
T 1f8f_A          295 ----TTAQFDVNDLLLGGKTILGVVEGSGS--PKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKP  366 (371)
T ss_dssp             ----CCCCCCHHHHHHTTCEEEECSGGGSC--HHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEE
T ss_pred             ----CccccCHHHHHhCCCEEEEeCCCCCc--hHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEE
Confidence                11234556678899999887654321  2578999999999999985  4777 999999999999988775 799


Q ss_pred             EEEec
Q 018404          350 LVVVS  354 (356)
Q Consensus       350 vv~~~  354 (356)
                      |++++
T Consensus       367 vv~~~  371 (371)
T 1f8f_A          367 IIKIA  371 (371)
T ss_dssp             EEECC
T ss_pred             EEeeC
Confidence            99863

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=3.7e-50  Score=374.77  Aligned_cols=304  Identities=16%  Similarity=0.183  Sum_probs=259.4

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      |+++|||+++.++  +++    ++++  ++|.| +++++||+|||.+++||++|++.+.+......+|.++|||+  +|+
T Consensus         1 M~m~mka~~~~~~--~~~----l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~--~G~   69 (348)
T 3two_A            1 MRVQSKGFAIFSK--DEH----FKPH--DFSRH-AVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEI--AGI   69 (348)
T ss_dssp             CCEEEEEEEBCST--TSC----CEEE--EEEEC-CCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCE--EEE
T ss_pred             CceEEEEEEEccC--CCC----CeEE--EeeCC-CCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcce--eEE
Confidence            3468999999886  544    5665  45555 78999999999999999999998885444457799999995  999


Q ss_pred             EEEecCCCCCCCCCCEEEEc----------------------------------------cccceeEeecCCCcceeecC
Q 018404           86 AKVVDSGHPEFKKGDLVWGT----------------------------------------TGWEEYSLIKNPQGLFKIHH  125 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~----------------------------------------g~~~~~~~v~~~~~l~~~~p  125 (356)
                      |+++|++|++|++||+|++.                                        |+|+||++++++. ++++ |
T Consensus        70 V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~-~~~i-P  147 (348)
T 3two_A           70 IKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENY-VISV-D  147 (348)
T ss_dssp             EEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGG-CEEC-C
T ss_pred             EEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhh-EEEC-C
Confidence            99999999999999999752                                        8999999999999 9999 9


Q ss_pred             CCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHH
Q 018404          126 TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVE  205 (356)
Q Consensus       126 ~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~  205 (356)
                      +++++. ++|++++++.|||+++.+ .++++|++|||+|+ |++|++++|+|+.+|++|++++++++++          +
T Consensus       148 ~~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~----------~  214 (348)
T 3two_A          148 KNAPLE-KVAPLLCAGITTYSPLKF-SKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKK----------Q  214 (348)
T ss_dssp             TTSCHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTH----------H
T ss_pred             CCCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHH----------H
Confidence            996665 688899999999999965 68999999999995 9999999999999999999999999998          9


Q ss_pred             HHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCch-HHHHHHHhhccCCeEEEEccccccCCCCCccccchHH
Q 018404          206 LLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMN  284 (356)
Q Consensus       206 ~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  284 (356)
                      .++ ++|+++++ .+.. .    +.    .++|+||||+|+. .+..++++|+++|+++.+|.....    .....+...
T Consensus       215 ~~~-~lGa~~v~-~~~~-~----~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~  279 (348)
T 3two_A          215 DAL-SMGVKHFY-TDPK-Q----CK----EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVE----VAPVLSVFD  279 (348)
T ss_dssp             HHH-HTTCSEEE-SSGG-G----CC----SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGG----GCCEEEHHH
T ss_pred             HHH-hcCCCeec-CCHH-H----Hh----cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCC----CcccCCHHH
Confidence            998 99999888 3221 2    11    1799999999996 999999999999999999975411    111145566


Q ss_pred             HH-hhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecCC
Q 018404          285 VV-YKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE  356 (356)
Q Consensus       285 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~  356 (356)
                      ++ .+++++.|+....     .++++++++++++|++++.+ ++|+++++++||+.+.+++..||+|++++++
T Consensus       280 ~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          280 FIHLGNRKVYGSLIGG-----IKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             HHHTCSCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             HHhhCCeEEEEEecCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence            66 8999999988776     67799999999999999865 6899999999999999999999999998763

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.7e-50  Score=374.93  Aligned_cols=304  Identities=19%  Similarity=0.253  Sum_probs=260.4

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccC-CCCCeEEEEEEEeecCHHhhhhhccCCC---CCCCCCCCCCccee
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVE-EGSNAILVKNLYLSCDPYMRARMSFNQD---PDFSSFTPGSPIEG   82 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~-~~~~evlV~v~~~~i~~~d~~~~~~~~~---~~~~p~v~G~e~~~   82 (356)
                      +++|||+++.++  |.+    +++  .++|.| + ++++||+|||.+++||++|++.+.+...   ...+|.++|||+  
T Consensus        13 ~~~mka~~~~~~--g~~----l~~--~~~p~P-~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~--   81 (359)
T 1h2b_A           13 VERLKAARLHEY--NKP----LRI--EDVDYP-RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHEN--   81 (359)
T ss_dssp             ----CEEEESST--TSC----CEE--ECCCCC-CCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCE--
T ss_pred             hhhceEEEEecC--CCC----cEE--EEccCC-CCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCc--
Confidence            578999999887  544    455  466777 7 8999999999999999999998874322   235789999995  


Q ss_pred             cEEEEEecCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccc
Q 018404           83 FGVAKVVDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSY  132 (356)
Q Consensus        83 ~G~V~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~  132 (356)
                      +|+|+++|++|++|++||+|+++                              |+|+||++++++. ++++ |+++++. 
T Consensus        82 ~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-  158 (359)
T 1h2b_A           82 VGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRS-VIKL-PKDISRE-  158 (359)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGG-EEEC-CTTCCHH-
T ss_pred             eEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHh-EEEC-CCCCCHH-
Confidence            99999999999999999999863                              7899999999998 9999 9996555 


Q ss_pred             hhc---ccCcchHHHHHHHHHH-cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHH
Q 018404          133 YTG---ILGMPGMTAWAGFYEI-CAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELL  207 (356)
Q Consensus       133 ~~a---~l~~~~~tA~~~l~~~-~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~  207 (356)
                      ++|   +++++++|||+++.+. +++++|++|||+|+ |++|++++|+|+.+ |++|++++++++++          +.+
T Consensus       159 ~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~----------~~~  227 (359)
T 1h2b_A          159 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL----------KLA  227 (359)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH----------HHH
T ss_pred             HHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHH----------HHH
Confidence            465   7888999999999765 89999999999997 99999999999999 99999999999998          999


Q ss_pred             HhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCch---HHHHHHHhhccCCeEEEEccccccCCCCCccccchH
Q 018404          208 KNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGK---MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLM  283 (356)
Q Consensus       208 ~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  283 (356)
                      + ++|+++++|+++.  +.+.+++.+++ ++|++|||+|+.   .+..++++  ++|+++.+|.....       ..+..
T Consensus       228 ~-~lGa~~vi~~~~~--~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-------~~~~~  295 (359)
T 1h2b_A          228 E-RLGADHVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-------RFPTI  295 (359)
T ss_dssp             H-HTTCSEEEETTSC--HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-------CCCHH
T ss_pred             H-HhCCCEEEeccch--HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-------CCCHH
Confidence            8 9999999998863  77888888877 999999999996   78888888  99999999974321       24555


Q ss_pred             HHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          284 NVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      .++.+++++.++....     .++++++++++++|++++.+ ++|+|+++++||+.+.+++..||+|+.+
T Consensus       296 ~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          296 RVISSEVSFEGSLVGN-----YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHhCCcEEEEecCCC-----HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            6788999999876654     67899999999999999988 8999999999999999988889999874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=3.8e-49  Score=371.77  Aligned_cols=314  Identities=16%  Similarity=0.210  Sum_probs=265.3

Q ss_pred             CCcccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCccee
Q 018404            3 ANSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEG   82 (356)
Q Consensus         3 ~~~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~   82 (356)
                      .++.|++|||+++.++  |.+    ++++  ++|.| +++++||+|||.+++||++|++.+.+. ....+|.++|||+  
T Consensus         2 ~~~~p~~mka~~~~~~--g~~----l~~~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~--   69 (376)
T 1e3i_A            2 TQGKVIKCKAAIAWKT--GSP----LCIE--EIEVS-PPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHEC--   69 (376)
T ss_dssp             CTTSCEEEEEEEBCST--TSC----CEEE--EEEEC-CCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEE--
T ss_pred             CCCCChheeEEEEecC--CCC----eEEE--EeeCC-CCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccc--
Confidence            3567889999999886  554    5665  45555 789999999999999999999987743 3345789999995  


Q ss_pred             cEEEEEecCCCCCCCCCCEEEEc-------------------------------------------------------cc
Q 018404           83 FGVAKVVDSGHPEFKKGDLVWGT-------------------------------------------------------TG  107 (356)
Q Consensus        83 ~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------------------------------g~  107 (356)
                      +|+|+++|++|++|++||+|++.                                                       |+
T Consensus        70 ~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~  149 (376)
T 1e3i_A           70 AGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSS  149 (376)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCC
T ss_pred             cEEEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCcc
Confidence            99999999999999999999852                                                       78


Q ss_pred             cceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEE
Q 018404          108 WEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVG  186 (356)
Q Consensus       108 ~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~  186 (356)
                      |+||++++++. ++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+| +|++|++++|+|+.+|+ +|++
T Consensus       150 ~aey~~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~  225 (376)
T 1e3i_A          150 FSQYTVVSEAN-LARV-DDEANLE-RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIA  225 (376)
T ss_dssp             SBSEEEEEGGG-EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEE
T ss_pred             ceeEEEecccc-EEEC-CCCCCHH-HhhhhccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEE
Confidence            99999999998 9999 9996555 57888899999999997788999999999999 59999999999999999 8999


Q ss_pred             EeCCcchhccccchhHHHHHHHhhcCCCEEEecCC-cccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEE
Q 018404          187 SAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE-ENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIA  263 (356)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v  263 (356)
                      ++++++++          +.++ ++|+++++|+++ ..++.+.+++.+++++|+||||+|+ ..+..++++|+++ |+++
T Consensus       226 ~~~~~~~~----------~~a~-~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv  294 (376)
T 1e3i_A          226 IDINGEKF----------PKAK-ALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCT  294 (376)
T ss_dssp             ECSCGGGH----------HHHH-HTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEE
T ss_pred             EcCCHHHH----------HHHH-HhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEE
Confidence            99999998          8898 999999999874 1278888988887799999999998 7889999999999 9999


Q ss_pred             EEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHH
Q 018404          264 ACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLF  341 (356)
Q Consensus       264 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~  341 (356)
                      .+|...      .....+...++.++ ++.++....+.  ..++++++++++++|+++  +.++++|+|+++++||+.+.
T Consensus       295 ~~G~~~------~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~  365 (376)
T 1e3i_A          295 VVGAKV------DEMTIPTVDVILGR-SINGTFFGGWK--SVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMK  365 (376)
T ss_dssp             ECCCSS------SEEEEEHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHH
T ss_pred             EECCCC------CccccCHHHhhccC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHh
Confidence            998721      12234555667777 88877543321  256889999999999987  56889999999999999998


Q ss_pred             cCCCcceEEEEe
Q 018404          342 SGRNVGKQLVVV  353 (356)
Q Consensus       342 ~~~~~gk~vv~~  353 (356)
                      +++ .+|+|+++
T Consensus       366 ~~~-~~Kvvi~~  376 (376)
T 1e3i_A          366 EGK-SIRTILTF  376 (376)
T ss_dssp             TTC-CSEEEEEC
T ss_pred             cCC-cceEEEeC
Confidence            876 47999874

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.2e-50  Score=369.44  Aligned_cols=315  Identities=20%  Similarity=0.194  Sum_probs=268.0

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  |.|.  .++++  ++|.| +++++||+|||.+++||++|++.+.+......+|.++|||+  +|+|+++
T Consensus         2 Mka~~~~~~--g~~~--~l~~~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~--~G~V~~v   72 (327)
T 1qor_A            2 ATRIEFHKH--GGPE--VLQAV--EFTPA-DPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEA--AGIVSKV   72 (327)
T ss_dssp             CEEEEBSSC--CSGG--GCEEE--ECCCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCE--EEEEEEE
T ss_pred             cEEEEEcCC--CChh--heEEe--ccCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCcee--EEEEEEE
Confidence            799999887  7663  56664  56667 78999999999999999999998774333344789999995  9999999


Q ss_pred             cCCCCCCCCCCEEEEc----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecC
Q 018404           90 DSGHPEFKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAA  165 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga  165 (356)
                      |+++++|++||+|...    |+|+||++++++. ++++ |+++++. ++|+++++++|||+++.+.+++++|++|+|+||
T Consensus        73 G~~v~~~~~GdrV~~~g~~~G~~aey~~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  149 (327)
T 1qor_A           73 GSGVKHIKAGDRVVYAQSALGAYSSVHNIIADK-AAIL-PAAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA  149 (327)
T ss_dssp             CTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGG-EEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCCCCCCEEEECCCCCceeeeEEEecHHH-cEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC
Confidence            9999999999999654    8999999999998 9999 9996554 577899999999999987789999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCC
Q 018404          166 SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHV  244 (356)
Q Consensus       166 ~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~  244 (356)
                      +|++|++++|+++..|++|++++++++++          +.++ ++|++.++|+.+. ++.+.+.+.+.+ ++|++|||+
T Consensus       150 ~ggiG~~~~~~a~~~G~~V~~~~~~~~~~----------~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~D~vi~~~  217 (327)
T 1qor_A          150 AGGVGLIACQWAKALGAKLIGTVGTAQKA----------QSAL-KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSV  217 (327)
T ss_dssp             TBHHHHHHHHHHHHHTCEEEEEESSHHHH----------HHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HcCCCEEEECCCc-cHHHHHHHHhCCCCceEEEECC
Confidence            99999999999999999999999998888          8888 8999999998876 888888888876 899999999


Q ss_pred             CchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhh-cceeeceeeecc---hhhHHHHHHHHHHHHHcCCC
Q 018404          245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYK-RIRMEGFVVFDY---FPQYSRFLDAVLPYIREGKV  320 (356)
Q Consensus       245 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~g~l  320 (356)
                      |...+..++++|+++|+++.+|...+..     ...+...++.+ ++.+.++....+   +....+.++++++++++|++
T Consensus       218 g~~~~~~~~~~l~~~G~iv~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  292 (327)
T 1qor_A          218 GRDTWERSLDCLQRRGLMVSFGNSSGAV-----TGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVI  292 (327)
T ss_dssp             CGGGHHHHHHTEEEEEEEEECCCTTCCC-----CCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSS
T ss_pred             chHHHHHHHHHhcCCCEEEEEecCCCCC-----CccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCc
Confidence            9989999999999999999999754321     12344556666 677665443222   22346778999999999999


Q ss_pred             cccee--eeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          321 VYVED--VADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       321 ~~~i~--~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++.++  ++|+|+++++|++.+.+++..||+|+.+
T Consensus       293 ~~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          293 KVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             CCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             ccccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999  8999999999999999988889999864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=7e-50  Score=372.21  Aligned_cols=310  Identities=24%  Similarity=0.315  Sum_probs=267.9

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++.++  |.|.  .+++  .++|.| +++++||+|||.+++||++|++.+.+. .....+|.++|||+  +|+|++
T Consensus         1 Mka~~~~~~--g~~~--~l~~--~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~--~G~V~~   71 (343)
T 2eih_A            1 MRAVVMRAR--GGPE--VLEV--ADLPVP-EPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADG--SGVVDA   71 (343)
T ss_dssp             CEEEEECSS--SSGG--GEEE--EECCCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEE--EEEEEE
T ss_pred             CeEEEEecC--CCCc--eEEE--EecCCC-CCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccce--EEEEEE
Confidence            789999887  7663  4555  466677 789999999999999999999987732 22235789999995  999999


Q ss_pred             ecCCCCCCCCCCEEE-------E--------------------c---cccceeEeecCCCcceeecCCCCCccchhcccC
Q 018404           89 VDSGHPEFKKGDLVW-------G--------------------T---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILG  138 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~-------~--------------------~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~  138 (356)
                      +|++|++|++||+|+       +                    +   |+|+||++++++. ++++ |+++++. ++|+++
T Consensus        72 vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~  148 (343)
T 2eih_A           72 VGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEAN-LAPK-PKNLSFE-EAAAIP  148 (343)
T ss_dssp             ECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGG-EEEC-CTTSCHH-HHHHSH
T ss_pred             ECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHH-eEEC-CCCCCHH-HHhhch
Confidence            999999999999999       4                    3   8999999999998 9999 9996554 577799


Q ss_pred             cchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          139 MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       139 ~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      +++.|||+++.+.+++++|++|||+|++|++|++++|+++.+|++|++++++++++          +.++ ++|++.++|
T Consensus       149 ~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~----------~~~~-~~ga~~~~d  217 (343)
T 2eih_A          149 LTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKL----------RRAK-ALGADETVN  217 (343)
T ss_dssp             HHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHH----------HHHH-HHTCSEEEE
T ss_pred             hhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-hcCCCEEEc
Confidence            99999999997767899999999999999999999999999999999999999998          8888 899999999


Q ss_pred             cCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceee
Q 018404          219 YKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV  297 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (356)
                      +.+. ++.+.+.+.+++ ++|++||++|+..+..++++|+++|+++.+|......     ...+...++.+++++.++..
T Consensus       218 ~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~g~~~  291 (343)
T 2eih_A          218 YTHP-DWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYE-----GTLPFAHVFYRQLSILGSTM  291 (343)
T ss_dssp             TTST-THHHHHHHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSCC-----CCCCTTHHHHTTCEEEECCS
T ss_pred             CCcc-cHHHHHHHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCc-----CccCHHHHHhCCcEEEEecC
Confidence            8876 788888888876 8999999999889999999999999999999754321     12344567789999988754


Q ss_pred             ecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          298 FDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       298 ~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ..     .++++++++++++|++++.++++|+|+++++||+.+.+++..||+|+.+
T Consensus       292 ~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          292 AS-----KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             CC-----GGGHHHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             cc-----HHHHHHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            33     5678999999999999999999999999999999999988889999975

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.5e-49  Score=371.00  Aligned_cols=314  Identities=18%  Similarity=0.180  Sum_probs=264.8

Q ss_pred             CcccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhh-hhccCCCCCCCCCCCCCccee
Q 018404            4 NSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRA-RMSFNQDPDFSSFTPGSPIEG   82 (356)
Q Consensus         4 ~~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~-~~~~~~~~~~~p~v~G~e~~~   82 (356)
                      ...|++|||+++.++  |++    ++++  ++|.| +++++||+|||.+++||++|++ .+.+... ..+|.++|||+  
T Consensus         3 ~~~~~~mka~~~~~~--~~~----l~~~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~--   70 (374)
T 1cdo_A            3 VGKVIKCKAAVAWEA--NKP----LVIE--EIEVD-VPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEG--   70 (374)
T ss_dssp             TTSCEEEEEEEBCST--TSC----CEEE--EEEEC-CCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCE--
T ss_pred             CCCcceeEEEEEecC--CCC----eEEE--EeeCC-CCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccc--
Confidence            457889999999887  654    4665  45556 7899999999999999999998 7764322 45789999995  


Q ss_pred             cEEEEEecCCCCCCCCCCEEEEc---------------------------------------------------ccccee
Q 018404           83 FGVAKVVDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEY  111 (356)
Q Consensus        83 ~G~V~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~  111 (356)
                      +|+|+++|++|++|++||+|++.                                                   |+|+||
T Consensus        71 ~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey  150 (374)
T 1cdo_A           71 AGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQY  150 (374)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSE
T ss_pred             eEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeE
Confidence            99999999999999999999853                                                   789999


Q ss_pred             EeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 018404          112 SLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGS  190 (356)
Q Consensus       112 ~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~  190 (356)
                      ++++++. ++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+| +|++|++++|+|+.+|+ +|++++++
T Consensus       151 ~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~  226 (374)
T 1cdo_A          151 TVVNQIA-VAKI-DPSAPLD-TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLN  226 (374)
T ss_dssp             EEEEGGG-EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred             EEEchhh-eEEC-CCCCCHH-HHhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            9999998 9999 9996665 68888999999999997778999999999999 59999999999999999 89999999


Q ss_pred             cchhccccchhHHHHHHHhhcCCCEEEecCC-cccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEEcc
Q 018404          191 REKVWLIPMQSQLVELLKNKFGFDDAFNYKE-ENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAACGM  267 (356)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~  267 (356)
                      ++++          +.++ ++|+++++|+.+ ..++.+.+++.+++++|++|||+|+ ..+..++++|+++ |+++.+|.
T Consensus       227 ~~~~----------~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~  295 (374)
T 1cdo_A          227 PDKF----------EKAK-VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW  295 (374)
T ss_dssp             GGGH----------HHHH-HTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred             HHHH----------HHHH-HhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcC
Confidence            9998          8898 999999999874 1268888888887799999999998 7889999999999 99999997


Q ss_pred             ccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCC
Q 018404          268 ISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRN  345 (356)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~  345 (356)
                      ....     ....+...++.++ ++.++....+.  ..++++++++++++|+++  +.++++|+|+++++||+.+.+++.
T Consensus       296 ~~~~-----~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~  367 (374)
T 1cdo_A          296 TDLH-----DVATRPIQLIAGR-TWKGSMFGGFK--GKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC  367 (374)
T ss_dssp             CSSS-----CEEECHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC
T ss_pred             CCCC-----CcccCHHHHhcCC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe
Confidence            5431     1223455566677 88877554321  256789999999999987  568899999999999999988775


Q ss_pred             cceEEEEe
Q 018404          346 VGKQLVVV  353 (356)
Q Consensus       346 ~gk~vv~~  353 (356)
                       +|+|+++
T Consensus       368 -~kvvi~~  374 (374)
T 1cdo_A          368 -IRTVLSL  374 (374)
T ss_dssp             -SEEEEEC
T ss_pred             -eEEEEeC
Confidence             7999875

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.4e-49  Score=370.43  Aligned_cols=303  Identities=19%  Similarity=0.184  Sum_probs=263.7

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC--CCCCCCCCCCCcceecEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ--DPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~--~~~~~p~v~G~e~~~~G~V~   87 (356)
                      |||++++++  |+|    +++  .++|.| +++++||+|||.+++||++|++.+++..  ....+|.++|||+  +|+|+
T Consensus         1 MkA~~~~~~--g~~----l~~--~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~--~G~V~   69 (345)
T 3jv7_A            1 MKAVQYTEI--GSE----PVV--VDIPTP-TPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEG--VGTVA   69 (345)
T ss_dssp             CEEEEECST--TSC----CEE--EECCCC-CCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEE--EEEEE
T ss_pred             CeEEEEcCC--CCc----eEE--EEecCC-CCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCccc--EEEEE
Confidence            799999998  765    456  466667 8899999999999999999999887432  2356789999995  99999


Q ss_pred             EecCCCCCCCCCCEEEE-----------------------------------ccccceeEeec-CCCcceeecCCCCCcc
Q 018404           88 VVDSGHPEFKKGDLVWG-----------------------------------TTGWEEYSLIK-NPQGLFKIHHTDVPLS  131 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~-~~~~l~~~~p~~~~~~  131 (356)
                      ++|++|++|++||+|++                                   .|+|+||++++ ++. ++++ |+ +++.
T Consensus        70 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~-~~~~-p~-~~~~  146 (345)
T 3jv7_A           70 ELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARH-LVPI-GD-LDPV  146 (345)
T ss_dssp             EECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGG-EEEC-TT-CCHH
T ss_pred             EECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhc-eEeC-CC-CCHH
Confidence            99999999999999986                                   37999999999 777 9999 88 7665


Q ss_pred             chhcccCcchHHHHHHHHH-HcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHh
Q 018404          132 YYTGILGMPGMTAWAGFYE-ICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKN  209 (356)
Q Consensus       132 ~~~a~l~~~~~tA~~~l~~-~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~  209 (356)
                       ++|+++++++|||+++.+ ...+++|++|+|+|+ |++|++++|+|+.+ +++|++++++++++          +.++ 
T Consensus       147 -~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~----------~~~~-  213 (345)
T 3jv7_A          147 -AAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRL----------ALAR-  213 (345)
T ss_dssp             -HHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHH----------HHHH-
T ss_pred             -HhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH----------HHHH-
Confidence             688899999999999977 458999999999995 99999999999999 77999999999998          9998 


Q ss_pred             hcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCch-HHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHh
Q 018404          210 KFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVY  287 (356)
Q Consensus       210 ~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  287 (356)
                      ++|+++++++++  ++.+.+++.+++ ++|++|||+|+. .+..++++|+++|+++.+|...+..     ...+. .++.
T Consensus       214 ~lGa~~~i~~~~--~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~-~~~~  285 (345)
T 3jv7_A          214 EVGADAAVKSGA--GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAH-----AKVGF-FMIP  285 (345)
T ss_dssp             HTTCSEEEECST--THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCC-----EEEST-TTSC
T ss_pred             HcCCCEEEcCCC--cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-----CCcCH-HHHh
Confidence            999999999876  788899999888 999999999995 9999999999999999999754421     12222 5678


Q ss_pred             hcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          288 KRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +++++.++....     .++++++++++++|++++ +.++|+++++++||+.+.+++..||+|+.+
T Consensus       286 ~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          286 FGASVVTPYWGT-----RSELMEVVALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             TTCEEECCCSCC-----HHHHHHHHHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             CCCEEEEEecCC-----HHHHHHHHHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            889998887765     678999999999999998 557999999999999999999999999863

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=2.1e-50  Score=372.93  Aligned_cols=310  Identities=18%  Similarity=0.220  Sum_probs=263.8

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc-CCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF-NQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~-~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||+++.++  |+|.    .++..++|.| +++++||+|||.+++||++|++.+.+ +.....+|.++|||+  +|+|++
T Consensus         1 MkA~~~~~~--g~~~----~l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~--~G~V~~   71 (324)
T 3nx4_A            1 MQALILEQQ--DGKT----LASVQHLEES-QLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDF--AGTVHA   71 (324)
T ss_dssp             CEEEEEEES--SSSE----EEEEEECCGG-GSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEE--EEEEEE
T ss_pred             CceEEEecC--CCCc----eeeEeecCCC-CCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCcccccee--EEEEEE
Confidence            799999998  8874    4555677777 88999999999999999999998873 333356789999995  999999


Q ss_pred             ecCCCCCCCCCCEEEE---------ccccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHH--cCCCCC
Q 018404           89 VDSGHPEFKKGDLVWG---------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI--CAPKKG  157 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~---------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~--~~~~~g  157 (356)
                      +|  +++|++||+|++         .|+|+||++++++. ++++ |+++++. ++|+++..++|||+++...  .+++++
T Consensus        72 ~G--v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~  146 (324)
T 3nx4_A           72 SE--DPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDW-LVAL-PAGLSSR-NAMIIGTAGFTAMLCVMALEDAGIRPQ  146 (324)
T ss_dssp             ES--STTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGG-CEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred             eC--CCCCCCCCEEEEcccccCCCCCCceeeEEecCHHH-cEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhhcccCCC
Confidence            98  578999999995         38999999999999 9999 9996665 6888999999999988643  456663


Q ss_pred             C-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          158 E-YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       158 ~-~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      + +|||+|++|++|++++|+|+.+|++|++++++++++          +.++ ++|+++++|+++. +.   +++.++++
T Consensus       147 ~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~----------~~~~-~lGa~~vi~~~~~-~~---~~~~~~~~  211 (324)
T 3nx4_A          147 DGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTH----------GYLK-SLGANRILSRDEF-AE---SRPLEKQL  211 (324)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH----------HHHH-HHTCSEEEEGGGS-SC---CCSSCCCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-hcCCCEEEecCCH-HH---HHhhcCCC
Confidence            3 499999999999999999999999999999999998          9999 9999999998764 32   55556669


Q ss_pred             ccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHHHH
Q 018404          237 IDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLPYI  315 (356)
Q Consensus       237 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~  315 (356)
                      +|++|||+|++.+..++++|+++|+++.+|...+.     ....+...++.+++++.++....+ +....+.++++++++
T Consensus       212 ~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  286 (324)
T 3nx4_A          212 WAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGF-----ALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDL  286 (324)
T ss_dssp             EEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCS-----EEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHS
T ss_pred             ccEEEECCCcHHHHHHHHHHhcCCEEEEEecCCCC-----CCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999975432     223456678889999999876543 344567899999999


Q ss_pred             HcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEec
Q 018404          316 REGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       316 ~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      ++|++++. +++|+++++++||+.+.+++..||+|++++
T Consensus       287 ~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          287 PESFYAQA-ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             CHHHHHHH-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HcCCCCCC-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            99999987 889999999999999999999999999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=7.1e-49  Score=369.57  Aligned_cols=314  Identities=19%  Similarity=0.221  Sum_probs=264.1

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      .|++|||+++.++  |++    ++++  ++|.| +++++||+|||.+++||++|++.+.+......+|.++|||+  +|+
T Consensus         3 ~p~~mkA~~~~~~--~~~----l~~~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~--~G~   71 (373)
T 2fzw_A            3 EVIKCKAAVAWEA--GKP----LSIE--EIEVA-PPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLG--AGI   71 (373)
T ss_dssp             CCEEEEEEEBCST--TSC----CEEE--EEEEC-CCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEE--EEE
T ss_pred             CccceEEEEEecC--CCC----cEEE--EeeCC-CCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccc--cEE
Confidence            4678999999887  554    5665  45555 78999999999999999999998874333345789999995  999


Q ss_pred             EEEecCCCCCCCCCCEEEEc---------------------------------------------------cccceeEee
Q 018404           86 AKVVDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYSLI  114 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v  114 (356)
                      |+++|++|++|++||+|++.                                                   |+|+||+++
T Consensus        72 V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v  151 (373)
T 2fzw_A           72 VESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV  151 (373)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEE
T ss_pred             EEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEE
Confidence            99999999999999999853                                                   789999999


Q ss_pred             cCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcch
Q 018404          115 KNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREK  193 (356)
Q Consensus       115 ~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~  193 (356)
                      +++. ++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+| +|++|++++|+|+.+|+ +|+++++++++
T Consensus       152 ~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~avqla~~~Ga~~Vi~~~~~~~~  227 (373)
T 2fzw_A          152 ADIS-VAKI-DPLAPLD-KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDINKDK  227 (373)
T ss_dssp             EGGG-EEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGG
T ss_pred             chhh-eEEC-CCCCCHH-HHhhhccHHHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence            9998 9999 9996655 68888999999999997788999999999999 59999999999999999 89999999999


Q ss_pred             hccccchhHHHHHHHhhcCCCEEEecCC-cccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEEccccc
Q 018404          194 VWLIPMQSQLVELLKNKFGFDDAFNYKE-ENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAACGMISQ  270 (356)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~  270 (356)
                      +          +.++ ++|+++++|+++ ..++.+.+++.+++++|+||||+|+ ..+..++++|+++ |+++.+|....
T Consensus       228 ~----------~~~~-~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~  296 (373)
T 2fzw_A          228 F----------ARAK-EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS  296 (373)
T ss_dssp             H----------HHHH-HHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT
T ss_pred             H----------HHHH-HcCCceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCC
Confidence            8          8898 999999999874 1278889999887799999999998 7889999999999 99999997432


Q ss_pred             cCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcce
Q 018404          271 YNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGK  348 (356)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk  348 (356)
                      .    .....+...++.++ ++.++....+.  ..++++++++++++|+++  +.++++|+|+++++||+.+.+++. +|
T Consensus       297 ~----~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k  368 (373)
T 2fzw_A          297 G----EEIATRPFQLVTGR-TWKGTAFGGWK--SVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IR  368 (373)
T ss_dssp             T----CCEEECTHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SE
T ss_pred             C----ceeeeCHHHHhcCC-EEEEeccCCCC--cHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ce
Confidence            1    11223445566677 88877554321  256799999999999987  568899999999999999988765 69


Q ss_pred             EEEEe
Q 018404          349 QLVVV  353 (356)
Q Consensus       349 ~vv~~  353 (356)
                      +|+++
T Consensus       369 vvi~~  373 (373)
T 2fzw_A          369 TVVKI  373 (373)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-49  Score=366.64  Aligned_cols=313  Identities=21%  Similarity=0.229  Sum_probs=267.6

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G   84 (356)
                      +|.+|||++++++  |.+    ++++  ++|.| +++++||+|||.+++||++|++.+.+. .....+|.++|||+  +|
T Consensus         2 ~p~~mka~~~~~~--g~~----l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~--~G   70 (347)
T 2hcy_A            2 IPETQKGVIFYES--HGK----LEYK--DIPVP-KPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEG--AG   70 (347)
T ss_dssp             CCSEEEEEEESST--TCC----CEEE--EEECC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEE--EE
T ss_pred             CCcccEEEEEeCC--CCC----CEEE--EeeCC-CCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccc--eE
Confidence            6778999999887  543    5665  55666 789999999999999999999887732 22345789999995  99


Q ss_pred             EEEEecCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCCCCccch
Q 018404           85 VAKVVDSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYY  133 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~  133 (356)
                      +|+++|++|++|++||+|++                               .|+|+||++++++. ++++ |+++++. +
T Consensus        71 ~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~  147 (347)
T 2hcy_A           71 VVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQ-AAHI-PQGTDLA-Q  147 (347)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTT-SEEE-CTTCCHH-H
T ss_pred             EEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEecccc-EEEC-CCCCCHH-H
Confidence            99999999999999999985                               27899999999999 9999 9996555 5


Q ss_pred             hcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC
Q 018404          134 TGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF  213 (356)
Q Consensus       134 ~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~  213 (356)
                      +|+++++++|||+++.. .++++|++|||+|++|++|++++|+++.+|++|++++++++++          +.++ ++|+
T Consensus       148 aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~----------~~~~-~~g~  215 (347)
T 2hcy_A          148 VAPILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE----------ELFR-SIGG  215 (347)
T ss_dssp             HGGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH----------HHHH-HTTC
T ss_pred             HHHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH----------HHHH-HcCC
Confidence            88899999999999965 5899999999999999999999999999999999999998888          8888 8999


Q ss_pred             CEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhccee
Q 018404          214 DDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRM  292 (356)
Q Consensus       214 ~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (356)
                      +.++|+.+..++.+.+.+.+.+++|++||++|. ..+..++++|+++|+++.+|...+.     ....+...++.+++++
T Consensus       216 ~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~i  290 (347)
T 2hcy_A          216 EVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGA-----KCCSDVFNQVVKSISI  290 (347)
T ss_dssp             CEEEETTTCSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTC-----EEEEEHHHHHHTTCEE
T ss_pred             ceEEecCccHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCC-----CCCCCHHHHhhCCcEE
Confidence            989998742378888888776689999999998 7899999999999999999975422     1234566778899999


Q ss_pred             eceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          293 EGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       293 ~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      .|+....     .++++++++++++|++++.+ ++|+|+++++||+.+.+++..||+|+++++
T Consensus       291 ~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  347 (347)
T 2hcy_A          291 VGSYVGN-----RADTREALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVVDTSK  347 (347)
T ss_dssp             EECCCCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred             EEccCCC-----HHHHHHHHHHHHhCCCccce-EEEcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence            9876654     57789999999999999864 689999999999999998888999998764

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=5.1e-49  Score=369.96  Aligned_cols=320  Identities=13%  Similarity=0.127  Sum_probs=260.4

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      +|.+|||+++.++  +     .++++ .++|.| +++++||+|||.+++||++|++.+.+   ...+|.++|||+  +|+
T Consensus         8 ~p~~mkA~v~~~~--~-----~l~~~-~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g---~~~~p~v~G~e~--~G~   73 (371)
T 3gqv_A            8 PPPQQTALTVNDH--D-----EVTVW-NAAPCP-MLPRDQVYVRVEAVAINPSDTSMRGQ---FATPWAFLGTDY--AGT   73 (371)
T ss_dssp             CCSCEEEEEECTT--S-----CEEEE-EEECCC-CCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEE--EEE
T ss_pred             CchhceeEEEcCC--C-----ceEEe-ccCCCC-CCCCCEEEEEEEEEEcCHHHHHHhhc---CCCCCccCcccc--EEE
Confidence            6678999999775  2     24554 156666 78999999999999999999987763   234689999995  999


Q ss_pred             EEEecCCCCCCCCCCEEEEc-----------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHH-cC
Q 018404           86 AKVVDSGHPEFKKGDLVWGT-----------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI-CA  153 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~-~~  153 (356)
                      |+++|++|++|++||+|++.           |+|+||+++++.. ++++ |+++++. ++|+++++++|||+++.+. .+
T Consensus        74 V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~  150 (371)
T 3gqv_A           74 VVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRV-WAKI-PKGLSFE-QAAALPAGISTAGLAMKLLGLP  150 (371)
T ss_dssp             EEEECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTC-EEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHHTCC
T ss_pred             EEEeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhh-eEEC-CCCCCHH-HHhhhhhhHHHHHHHHHhhccC
Confidence            99999999999999999975           7999999999999 9999 9996655 5777899999999999777 55


Q ss_pred             C-----------CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc
Q 018404          154 P-----------KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE  222 (356)
Q Consensus       154 ~-----------~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~  222 (356)
                      +           ++|++|||+|++|++|++++|+|+.+|++|++++ +++++          +.++ ++|+++++|+++.
T Consensus       151 ~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~----------~~~~-~lGa~~vi~~~~~  218 (371)
T 3gqv_A          151 LPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNF----------DLAK-SRGAEEVFDYRAP  218 (371)
T ss_dssp             CCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH----------HHHH-HTTCSEEEETTST
T ss_pred             CCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHH----------HHHH-HcCCcEEEECCCc
Confidence            3           8999999999989999999999999999999997 67887          8888 9999999999887


Q ss_pred             ccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhh-ccCCeEEEEccccccCCCCC---ccccchHHHHhhcceeeceee
Q 018404          223 NDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNM-RLHGRIAACGMISQYNLSQP---EGVHNLMNVVYKRIRMEGFVV  297 (356)
Q Consensus       223 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  297 (356)
                       ++.+.+++.+++++|++|||+|+ ..+..++++| +++|+++.+|..........   ........++.+++++.++..
T Consensus       219 -~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~  297 (371)
T 3gqv_A          219 -NLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYG  297 (371)
T ss_dssp             -THHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTC
T ss_pred             -hHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeecccccccccccc
Confidence             89999999998889999999999 7899999999 59999999996443210000   111123456778999988765


Q ss_pred             ecc-h---hhHHHHHHHHHHHHHcCCCcccee--eeeCCCcHHHHHHHHHcCCCcc-eEEEEecC
Q 018404          298 FDY-F---PQYSRFLDAVLPYIREGKVVYVED--VADGLENAPAALVGLFSGRNVG-KQLVVVSR  355 (356)
Q Consensus       298 ~~~-~---~~~~~~l~~~~~~~~~g~l~~~i~--~~~~l~~~~~a~~~~~~~~~~g-k~vv~~~~  355 (356)
                      ... +   +...++++++++++++|++++.+.  +.|+|+++++||+.+.+++..| |+|+.+++
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          298 RPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             BCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence            433 1   233456678999999999997644  4589999999999999999888 67777655

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=1.3e-48  Score=367.82  Aligned_cols=315  Identities=16%  Similarity=0.181  Sum_probs=264.4

Q ss_pred             CcccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceec
Q 018404            4 NSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGF   83 (356)
Q Consensus         4 ~~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~   83 (356)
                      ...|++|||+++.++  |.+    ++++  ++|.| +++++||+|||.+++||++|++.+.+.... .+|.++|||+  +
T Consensus         3 ~~~~~~mkA~~~~~~--g~~----l~~~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~P~v~GhE~--~   70 (374)
T 2jhf_A            3 AGKVIKCKAAVLWEE--KKP----FSIE--EVEVA-PPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEA--A   70 (374)
T ss_dssp             TTSCEEEEEEEBCST--TSC----CEEE--EEEEC-CCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSE--E
T ss_pred             CCCceeEEEEEEecC--CCc----eEEE--EccCC-CCCCCeEEEEEeEEeechhhHHHHcCCCCC-CCCcccCcCc--e
Confidence            446889999999887  654    5665  45555 789999999999999999999987743222 2789999995  9


Q ss_pred             EEEEEecCCCCCCCCCCEEEEc---------------------------------------------------cccceeE
Q 018404           84 GVAKVVDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYS  112 (356)
Q Consensus        84 G~V~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~  112 (356)
                      |+|+++|++|++|++||+|++.                                                   |+|+||+
T Consensus        71 G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~  150 (374)
T 2jhf_A           71 GIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYT  150 (374)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEE
T ss_pred             EEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEE
Confidence            9999999999999999999853                                                   7899999


Q ss_pred             eecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCc
Q 018404          113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSR  191 (356)
Q Consensus       113 ~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~  191 (356)
                      +++++. ++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+| +|++|++++|+|+.+|+ +|+++++++
T Consensus       151 ~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~  226 (374)
T 2jhf_A          151 VVDEIS-VAKI-DAASPLE-KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINK  226 (374)
T ss_dssp             EEEGGG-EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             EEchHH-eEEC-CCCCCHH-HhhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence            999998 9999 9996655 68888999999999997778999999999999 69999999999999999 899999999


Q ss_pred             chhccccchhHHHHHHHhhcCCCEEEecCC-cccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEEccc
Q 018404          192 EKVWLIPMQSQLVELLKNKFGFDDAFNYKE-ENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAACGMI  268 (356)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~  268 (356)
                      +++          +.++ ++|+++++|+.+ ..++.+.+++.+++++|+||||+|+ ..+..++++|+++ |+++.+|..
T Consensus       227 ~~~----------~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  295 (374)
T 2jhf_A          227 DKF----------AKAK-EVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVP  295 (374)
T ss_dssp             GGH----------HHHH-HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCC
T ss_pred             HHH----------HHHH-HhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccC
Confidence            998          8888 999999999874 1268888998887799999999998 7889999999999 999999974


Q ss_pred             cccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCc
Q 018404          269 SQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNV  346 (356)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~  346 (356)
                      ...    .....+...++.++ ++.++....+.  ..++++++++++++|+++  +.++++|+|+++++||+.+.+++. 
T Consensus       296 ~~~----~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-  367 (374)
T 2jhf_A          296 PDS----QNLSMNPMLLLSGR-TWKGAIFGGFK--SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-  367 (374)
T ss_dssp             CTT----CCEEECTHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-
T ss_pred             CCC----CccccCHHHHhcCC-eEEEeccCCCC--hHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-
Confidence            321    11223445566777 88877654321  256789999999999987  568899999999999999988774 


Q ss_pred             ceEEEEe
Q 018404          347 GKQLVVV  353 (356)
Q Consensus       347 gk~vv~~  353 (356)
                      +|+|+.+
T Consensus       368 ~Kvvi~~  374 (374)
T 2jhf_A          368 IRTILTF  374 (374)
T ss_dssp             SEEEEEC
T ss_pred             ceEEEeC
Confidence            7999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.8e-48  Score=364.76  Aligned_cols=333  Identities=33%  Similarity=0.570  Sum_probs=273.2

Q ss_pred             CcccccccEEEEe-ec-ccCCCCccceEEEEeecccccCC-CCCeEEEEEEEeecCHHhhhhhcc-----CCCCCCCCCC
Q 018404            4 NSEVLSNKQVILK-NY-VEGFPKETDMLVKASSISLKVEE-GSNAILVKNLYLSCDPYMRARMSF-----NQDPDFSSFT   75 (356)
Q Consensus         4 ~~~~~~~~a~~~~-~~-~~g~p~~~~l~~~~~~~~~p~~~-~~~evlV~v~~~~i~~~d~~~~~~-----~~~~~~~p~v   75 (356)
                      +.+|++|||+++. ++ ..|.|.+.+++++  ++|.| ++ +++||+|||.++|||++|++.+..     +.....+|.+
T Consensus         3 ~~~~~~mka~v~~~~~~~~g~p~~~~l~~~--~~~~P-~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v   79 (357)
T 2zb4_A            3 AAAAMIVQRVVLNSRPGKNGNPVAENFRME--EVYLP-DNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQV   79 (357)
T ss_dssp             ---CCEEEEEEECCCCCTTSCCCGGGEEEE--EEECC-SCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSB
T ss_pred             CcccccceEEEEeccCCCCCCCCcCceEEE--eecCC-CCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCcc
Confidence            4578899999994 42 0245533567775  45556 67 999999999999999999876653     1113456889


Q ss_pred             CCCcceecEEEEEecCCCCCCCCCCEEEEc-cccceeEeecCCCcceeecCCCC---CccchhcccCcchHHHHHHHHHH
Q 018404           76 PGSPIEGFGVAKVVDSGHPEFKKGDLVWGT-TGWEEYSLIKNPQGLFKIHHTDV---PLSYYTGILGMPGMTAWAGFYEI  151 (356)
Q Consensus        76 ~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~l~~~~p~~~---~~~~~~a~l~~~~~tA~~~l~~~  151 (356)
                      +|||+  +|+|++  +++++|++||+|++. |+|+||++++++. ++++ |+++   +++.++|+++++++|||+++.+.
T Consensus        80 ~G~E~--~G~V~~--~~v~~~~vGdrV~~~~G~~aey~~v~~~~-~~~i-P~~~~~~~~~~~~a~l~~~~~ta~~al~~~  153 (357)
T 2zb4_A           80 VDGGG--IGIIEE--SKHTNLTKGDFVTSFYWPWQTKVILDGNS-LEKV-DPQLVDGHLSYFLGAIGMPGLTSLIGIQEK  153 (357)
T ss_dssp             CEEEE--EEEEEE--ECSTTCCTTCEEEEEEEESBSEEEEEGGG-CEEC-CGGGGTTCGGGGGTTTSHHHHHHHHHHHHH
T ss_pred             ccccE--EEEEEe--cCCCCCCCCCEEEecCCCcEEEEEEchHH-ceec-CcccccCchhHHHHhcccHHHHHHHHHHHh
Confidence            99985  899999  889999999999987 7999999999998 9999 9985   22546788999999999999778


Q ss_pred             cCCCCC--CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHH
Q 018404          152 CAPKKG--EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA  228 (356)
Q Consensus       152 ~~~~~g--~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  228 (356)
                      +++++|  ++|||+|++|++|++++|+++.+|+ +|++++++++++          +.+++++|++.++|+.+. ++.+.
T Consensus       154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~----------~~~~~~~g~~~~~d~~~~-~~~~~  222 (357)
T 2zb4_A          154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKC----------ILLTSELGFDAAINYKKD-NVAEQ  222 (357)
T ss_dssp             SCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHH----------HHHHHTSCCSEEEETTTS-CHHHH
T ss_pred             cCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHH----------HHHHHHcCCceEEecCch-HHHHH
Confidence            899999  9999999999999999999999999 999999998887          888734999999999876 88888


Q ss_pred             HHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCcccc----chHHHHhhcceeeceeeecchhhH
Q 018404          229 LKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVH----NLMNVVYKRIRMEGFVVFDYFPQY  304 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  304 (356)
                      +.+.+.+++|++|||+|+..+..++++|+++|+++.+|.........+....    ....++.+++++.++....+....
T Consensus       223 ~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  302 (357)
T 2zb4_A          223 LRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKF  302 (357)
T ss_dssp             HHHHCTTCEEEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGH
T ss_pred             HHHhcCCCCCEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHH
Confidence            9888766899999999999999999999999999999986542111110000    024577889999988765554555


Q ss_pred             HHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecCC
Q 018404          305 SRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE  356 (356)
Q Consensus       305 ~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~  356 (356)
                      .+.++++++++++|++++.+..+|+|+++++||+.+.+++..||+|++++++
T Consensus       303 ~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  354 (357)
T 2zb4_A          303 EPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE  354 (357)
T ss_dssp             HHHHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred             HHHHHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence            7889999999999999988878899999999999999988889999998653

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2.4e-49  Score=371.96  Aligned_cols=309  Identities=19%  Similarity=0.250  Sum_probs=262.0

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      +|++|||++++++  +     .+++  .++|.| +++++||+|||.+++||++|++.+.+.. ...+|.++|||+  +|+
T Consensus        20 ~p~~mkA~v~~~~--~-----~l~~--~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~--~G~   86 (370)
T 4ej6_A           20 FQSMMKAVRLESV--G-----NISV--RNVGIP-EPGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEF--CGI   86 (370)
T ss_dssp             -CCEEEEEEEEET--T-----EEEE--EEEECC-CCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSE--EEE
T ss_pred             cchheEEEEEecC--C-----ceEE--EEccCC-CCCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcce--EEE
Confidence            5778999999885  3     2455  456666 7899999999999999999999887432 456789999995  999


Q ss_pred             EEEecCCCCCCCCCCEEEE------------------------------ccccceeEeecCCCcceeecCCCCCccchhc
Q 018404           86 AKVVDSGHPEFKKGDLVWG------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTG  135 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a  135 (356)
                      |+++|+++++|++||+|++                              .|+|+||++++++. ++++ |+++++  +.|
T Consensus        87 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~~~~--~~a  162 (370)
T 4ej6_A           87 VVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQ-AFEI-PLTLDP--VHG  162 (370)
T ss_dssp             EEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-EEEE-CTTSCT--TGG
T ss_pred             EEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhh-EEEC-CCCCCH--HHH
Confidence            9999999999999999986                              28999999999998 9999 999544  444


Q ss_pred             ccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCC
Q 018404          136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFD  214 (356)
Q Consensus       136 ~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  214 (356)
                      +++.++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++          +.++ ++|++
T Consensus       163 al~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~----------~~a~-~lGa~  229 (370)
T 4ej6_A          163 AFCEPLACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKR----------RLAE-EVGAT  229 (370)
T ss_dssp             GGHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH----------HHHH-HHTCS
T ss_pred             hhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----------HHHH-HcCCC
Confidence            5888999999999 6789999999999995 9999999999999999 999999999998          8888 99999


Q ss_pred             EEEecCCcccHHHHHHH---hCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcc
Q 018404          215 DAFNYKEENDLDAALKR---CFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRI  290 (356)
Q Consensus       215 ~vv~~~~~~~~~~~~~~---~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  290 (356)
                      .++|+++. ++.+.+++   .+++++|+||||+|+ ..+..++++|+++|+++.+|.....    .....+...++.+++
T Consensus       230 ~vi~~~~~-~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~----~~~~~~~~~~~~~~~  304 (370)
T 4ej6_A          230 ATVDPSAG-DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQG----EKVEIEPFDILFREL  304 (370)
T ss_dssp             EEECTTSS-CHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTT----CCCCCCHHHHHHTTC
T ss_pred             EEECCCCc-CHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCC----CccccCHHHHHhCCc
Confidence            99999887 88889988   777799999999997 7899999999999999999975432    123356778889999


Q ss_pred             eeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCC-CcceEEEEecC
Q 018404          291 RMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGR-NVGKQLVVVSR  355 (356)
Q Consensus       291 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~-~~gk~vv~~~~  355 (356)
                      ++.|+....      +.++++++++++|+++  +.++++|+|+++++||+.+.+++ ..+|+|+++++
T Consensus       305 ~i~g~~~~~------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          305 RVLGSFINP------FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             EEEECCSCT------TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             EEEEeccCh------HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence            999987643      3478999999999995  56899999999999999998776 44688887654

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1.9e-50  Score=371.81  Aligned_cols=305  Identities=16%  Similarity=0.168  Sum_probs=238.7

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEE
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V   86 (356)
                      |.+|||+++++.    |.  .+++  .++|.| +++++||+|||.+++||++|++.+.+......+|.++|||+  +|+|
T Consensus         2 M~tMka~~~~~~----~~--~l~~--~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~--~G~V   70 (315)
T 3goh_A            2 MEQHQVWAYQTK----TH--SVTL--NSVDIP-ALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDG--AGVI   70 (315)
T ss_dssp             CCEEEEEEEETT----TT--EEEE--EEEECC-CCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEE--EEEE
T ss_pred             CcceEEEEEeCC----CC--eeEE--EecCCC-CCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeee--EEEE
Confidence            347999999852    32  3455  456666 78999999999999999999998885444557899999995  8999


Q ss_pred             EEecCCCCCCCCCCEEEEc------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEE
Q 018404           87 KVVDSGHPEFKKGDLVWGT------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYI  160 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~V  160 (356)
                      +++|+++++|++||+|++.      |+|+||++++++. ++++ |+++++. ++|+++++++|||+++ +.+++++|++|
T Consensus        71 ~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~~~~g~~V  146 (315)
T 3goh_A           71 VKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDR-VMTL-PDNLSFE-RAAALPCPLLTAWQAF-EKIPLTKQREV  146 (315)
T ss_dssp             EEECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTS-EEEC-CTTSCHH-HHHTSHHHHHHHHHHH-TTSCCCSCCEE
T ss_pred             EEeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHH-hccC-cCCCCHH-HHhhCccHHHHHHHHH-hhcCCCCCCEE
Confidence            9999999999999999984      8999999999999 9999 9996555 5778999999999999 78999999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEE
Q 018404          161 YVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIY  240 (356)
Q Consensus       161 lI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~v  240 (356)
                      ||+|+ |++|++++|+|+.+|++|++++ +++++          +.++ ++|++++++     + .+.+    ++++|++
T Consensus       147 lV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~----------~~~~-~lGa~~v~~-----d-~~~v----~~g~Dvv  203 (315)
T 3goh_A          147 LIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQ----------ALAA-KRGVRHLYR-----E-PSQV----TQKYFAI  203 (315)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCH----------HHHH-HHTEEEEES-----S-GGGC----CSCEEEE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhH----------HHHH-HcCCCEEEc-----C-HHHh----CCCccEE
Confidence            99998 9999999999999999999999 88888          8998 999998884     2 1122    4489999


Q ss_pred             EeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchh---hHHHHHHHHHHHHHc
Q 018404          241 FEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP---QYSRFLDAVLPYIRE  317 (356)
Q Consensus       241 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~  317 (356)
                      |||+|+..+..++++|+++|+++.+|......    ........+..+++++.++.....+.   ...+.++++++++++
T Consensus       204 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  279 (315)
T 3goh_A          204 FDAVNSQNAAALVPSLKANGHIICIQDRIPAP----IDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQ  279 (315)
T ss_dssp             ECC-------TTGGGEEEEEEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EECCCchhHHHHHHHhcCCCEEEEEeCCCCcc----ccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHC
Confidence            99999987789999999999999997532210    00000111122333333333211111   345678999999999


Q ss_pred             CCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          318 GKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       318 g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      |++++.++++|+|+++++||+.+.  +..||+|+++++
T Consensus       280 g~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          280 GKMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             TSSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             CCcccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence            999999999999999999999988  677999999864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.3e-48  Score=363.04  Aligned_cols=305  Identities=20%  Similarity=0.257  Sum_probs=263.8

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||++++++  |.+    +++  .++|.| +++++||+|||.++|||++|++.+.+. .....+|.++|||+  +|+|++
T Consensus         1 Mka~~~~~~--g~~----l~~--~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~--~G~V~~   69 (339)
T 1rjw_A            1 MKAAVVEQF--KEP----LKI--KEVEKP-TISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEG--VGIVEE   69 (339)
T ss_dssp             CEEEEBSST--TSC----CEE--EECCCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCE--EEEEEE
T ss_pred             CeEEEEcCC--CCC----cEE--EEeeCC-CCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccc--eEEEEE
Confidence            689999887  544    456  466777 789999999999999999999887732 22345789999995  999999


Q ss_pred             ecCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCCCCccchhccc
Q 018404           89 VDSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGIL  137 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l  137 (356)
                      +|++|++|++||+|++                               .|+|+||++++++. ++++ |+++++. ++|++
T Consensus        70 vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l  146 (339)
T 1rjw_A           70 VGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY-VVKI-PDNLSFE-EAAPI  146 (339)
T ss_dssp             ECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-CEEC-CTTSCHH-HHGGG
T ss_pred             ECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHH-EEEC-CCCCCHH-Hhhhh
Confidence            9999999999999985                               27899999999998 9999 9996555 58889


Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE
Q 018404          138 GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF  217 (356)
Q Consensus       138 ~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv  217 (356)
                      ++++.|||+++... ++++|++|||+|+ |++|++++|+|+.+|++|++++++++++          +.++ ++|++.++
T Consensus       147 ~~~~~ta~~~l~~~-~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~----------~~~~-~lGa~~~~  213 (339)
T 1rjw_A          147 FCAGVTTYKALKVT-GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL----------ELAK-ELGADLVV  213 (339)
T ss_dssp             GTHHHHHHHHHHHH-TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTCSEEE
T ss_pred             hhhHHHHHHHHHhc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHH-HCCCCEEe
Confidence            99999999999764 8999999999997 8899999999999999999999999998          8888 89999999


Q ss_pred             ecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeecee
Q 018404          218 NYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFV  296 (356)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (356)
                      |+.+. ++.+.+.+.+ +++|++|||+|+ ..+..++++|+++|+++.+|...+.      ...+...++.+++++.++.
T Consensus       214 d~~~~-~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~g~~  285 (339)
T 1rjw_A          214 NPLKE-DAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE------MPIPIFDTVLNGIKIIGSI  285 (339)
T ss_dssp             CTTTS-CHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE------EEEEHHHHHHTTCEEEECC
T ss_pred             cCCCc-cHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC------CccCHHHHHhCCcEEEEec
Confidence            98876 7888888877 689999999998 7899999999999999999975421      2345567788999998876


Q ss_pred             eecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          297 VFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       297 ~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      ...     .++++++++++++|++++.+ ++|+|+++++||+.+.+++..||+|+++++
T Consensus       286 ~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          286 VGT-----RKDLQEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             SCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             cCC-----HHHHHHHHHHHHcCCCCccE-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            654     57789999999999999864 689999999999999998888999999875

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=2.7e-48  Score=361.85  Aligned_cols=338  Identities=70%  Similarity=1.200  Sum_probs=273.9

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCC---CCCCCCCCCccee
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP---DFSSFTPGSPIEG   82 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~---~~~p~v~G~e~~~   82 (356)
                      ||++||++++..+..+.|...+++++..++|.|.+++++||+|||.++++|+.|+.....+...   ..+|+++|||+  
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~~~~g~~~~~~~~~~~p~v~G~e~--   78 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPSTAALAQAYTPGQPI--   78 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHHHHHBC---------CCCCTTSBC--
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHHhhcccCCCCccccCCCcCCCCee--
Confidence            4568999999987667774225777644666662279999999999999999886432221111   24689999996  


Q ss_pred             cEEEEE--ecCCCCCCCCCCEEEEccccceeEeecCCC-cceeecCC-CCCccchhcccCcchHHHHHHHHHHcCCCCCC
Q 018404           83 FGVAKV--VDSGHPEFKKGDLVWGTTGWEEYSLIKNPQ-GLFKIHHT-DVPLSYYTGILGMPGMTAWAGFYEICAPKKGE  158 (356)
Q Consensus        83 ~G~V~~--vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~l~~~~p~-~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~  158 (356)
                      +|++.+  +|+++++|++||+|++.|+|+||+++++.. .++++ |+ ++++++++|+++++++|||+++.+.+++++|+
T Consensus        79 ~G~~~~GvV~~~v~~~~vGdrV~~~g~~aey~~v~~~~~~~~~i-p~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~  157 (345)
T 2j3h_A           79 QGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI-QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGE  157 (345)
T ss_dssp             EEEEEEEEEEECSTTCCTTCEEEEEEESBSEEEECCCTTTCEEE-CCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCTTC
T ss_pred             ecceEEEEEecCCCCCCCCCEEEeecCceeEEEecccccceeec-CCCCCCHHHHHHhccccHHHHHHHHHHHhCCCCCC
Confidence            788887  999999999999999999999999998754 28899 75 55566567889999999999997778999999


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      +|||+|++|++|++++|+++.+|++|++++++++++          +.+++++|++.++|+.+..++.+.+++.+++++|
T Consensus       158 ~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~----------~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d  227 (345)
T 2j3h_A          158 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKV----------DLLKTKFGFDDAFNYKEESDLTAALKRCFPNGID  227 (345)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCc
Confidence            999999999999999999999999999999998887          7776469999999987633677788887756899


Q ss_pred             EEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcC
Q 018404          239 IYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREG  318 (356)
Q Consensus       239 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g  318 (356)
                      ++|||+|+..+..++++|+++|+++.+|.....+........+...++.+++++.++....+.....+.++++++++++|
T Consensus       228 ~vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g  307 (345)
T 2j3h_A          228 IYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREG  307 (345)
T ss_dssp             EEEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTT
T ss_pred             EEEECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCC
Confidence            99999999999999999999999999997654211111122344567889999988766554445567899999999999


Q ss_pred             CCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecCC
Q 018404          319 KVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE  356 (356)
Q Consensus       319 ~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~  356 (356)
                      ++++.++..|+|+++++||+.+.+++..||+|+.++++
T Consensus       308 ~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~~  345 (345)
T 2j3h_A          308 KITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE  345 (345)
T ss_dssp             SSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSCC
T ss_pred             CCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCCC
Confidence            99988888899999999999999999999999998764

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=3.9e-49  Score=380.39  Aligned_cols=320  Identities=20%  Similarity=0.226  Sum_probs=268.4

Q ss_pred             cccccccEEEEeeccc----------CCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC--------
Q 018404            5 SEVLSNKQVILKNYVE----------GFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN--------   66 (356)
Q Consensus         5 ~~~~~~~a~~~~~~~~----------g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~--------   66 (356)
                      ++|.+|||+++.++..          +.|. ..+++  .++|.| +++++||+|||.++|||++|++.....        
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~-~~l~~--~e~p~P-~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~  101 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPR-KSIHL--DDVPVP-ELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFL  101 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHH-HHCEE--EEECCC-CCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCC-CCcEE--EEccCC-CCCCCeEEEEEEEEEecchhhhhhhcCcccchhhh
Confidence            4688999999997510          1111 34566  456666 789999999999999999998653211        


Q ss_pred             -----C----CCCCCC-CCCCCcceecEEEEEecCCCCCCCCCCEEEE------------------------------cc
Q 018404           67 -----Q----DPDFSS-FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWG------------------------------TT  106 (356)
Q Consensus        67 -----~----~~~~~p-~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~------------------------------~g  106 (356)
                           .    ....+| .++|||+  +|+|+++|++|++|++||+|++                              .|
T Consensus       102 ~~~g~~~~~~~~~~~P~~v~GhE~--~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G  179 (456)
T 3krt_A          102 ERYGRVSDLAKRHDLPYHVIGSDL--AGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFG  179 (456)
T ss_dssp             HHHHTSCHHHHTTCCSEEECCSCC--EEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSC
T ss_pred             hhccccccccccCCCCccccccee--EEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCC
Confidence                 0    012345 6999995  9999999999999999999997                              28


Q ss_pred             ccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHH--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEE
Q 018404          107 GWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI--CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV  184 (356)
Q Consensus       107 ~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~--~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~V  184 (356)
                      +|+||+++++++ ++++ |+++++. ++|+++.+++|||+++...  +++++|++|+|+|++|++|++++|+|+.+|++|
T Consensus       180 ~~aey~~v~~~~-~~~~-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~v  256 (456)
T 3krt_A          180 GLAEIALVKSNQ-LMPK-PDHLSWE-EAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANP  256 (456)
T ss_dssp             SSBSEEEEEGGG-EEEC-CTTSCHH-HHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred             cccceEEechHH-eeEC-CCCCCHH-HHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeE
Confidence            999999999999 9999 9996655 5777888999999999654  789999999999998999999999999999999


Q ss_pred             EEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCccc-----------------HHHHHHHhCCC-CccEEEeCCCc
Q 018404          185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEND-----------------LDAALKRCFPE-GIDIYFEHVGG  246 (356)
Q Consensus       185 i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-----------------~~~~~~~~~~~-~~d~vid~~g~  246 (356)
                      ++++++++++          +.++ ++|++.++|+.+. +                 +.+.+++.+++ ++|+||||+|+
T Consensus       257 i~~~~~~~~~----------~~~~-~lGa~~vi~~~~~-d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          257 ICVVSSPQKA----------EICR-AMGAEAIIDRNAE-GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             EEEESSHHHH----------HHHH-HHTCCEEEETTTT-TCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             EEEECCHHHH----------HHHH-hhCCcEEEecCcC-cccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            9999999998          8998 9999999998764 3                 34788888887 99999999999


Q ss_pred             hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceee
Q 018404          247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDV  326 (356)
Q Consensus       247 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~  326 (356)
                      ..+..++++|+++|+++.+|...+.     ....+...++.+++++.|+....     .+.+.++++++++|++++.+++
T Consensus       325 ~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~  394 (456)
T 3krt_A          325 ETFGASVFVTRKGGTITTCASTSGY-----MHEYDNRYLWMSLKRIIGSHFAN-----YREAWEANRLIAKGRIHPTLSK  394 (456)
T ss_dssp             HHHHHHHHHEEEEEEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEE
T ss_pred             hhHHHHHHHhhCCcEEEEEecCCCc-----ccccCHHHHHhcCeEEEEeccCC-----HHHHHHHHHHHHcCCcccceeE
Confidence            9999999999999999999975432     22345667788888988887766     4556679999999999999999


Q ss_pred             eeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          327 ADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       327 ~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      +|+|+++++|++.+.+++..||+||.+..
T Consensus       395 ~~~l~~~~eA~~~l~~~~~~GKvvv~~~~  423 (456)
T 3krt_A          395 VYSLEDTGQAAYDVHRNLHQGKVGVLCLA  423 (456)
T ss_dssp             EEEGGGHHHHHHHHHTTCSSSEEEEESSC
T ss_pred             EEcHHHHHHHHHHHHhCCCCCcEEEEeCC
Confidence            99999999999999999999999998743

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=3.9e-49  Score=379.80  Aligned_cols=320  Identities=20%  Similarity=0.180  Sum_probs=266.8

Q ss_pred             CcccccccEEEEeecccC---------CCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc----------
Q 018404            4 NSEVLSNKQVILKNYVEG---------FPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS----------   64 (356)
Q Consensus         4 ~~~~~~~~a~~~~~~~~g---------~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~----------   64 (356)
                      .++|.+|||+++..+  |         ...+..++++  ++|.| +++++||+|||.++|||++|++...          
T Consensus        19 ~~~p~tmkA~v~~~~--~~~~~~~~~~~~~~~~l~~~--e~p~P-~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~   93 (447)
T 4a0s_A           19 APVPDTYLALHLRAE--DADMFKGVADKDVRKSLRLG--EVPMP-ELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFL   93 (447)
T ss_dssp             SCCCSEEEEEEEEGG--GTTTTTTCSSCCHHHHCEEE--EEECC-CCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHH
T ss_pred             cCCChhheeeeeecc--ccccccccccCCCCCCceEE--eccCC-CCCCCeEEEEEEEEEECcHHhhhhccCcccchhhh
Confidence            347889999999997  4         1111245664  55566 7899999999999999999974321          


Q ss_pred             ---c----CCCCCCCC-CCCCCcceecEEEEEecCCCCCCCCCCEEEE------------------------------cc
Q 018404           65 ---F----NQDPDFSS-FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWG------------------------------TT  106 (356)
Q Consensus        65 ---~----~~~~~~~p-~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~------------------------------~g  106 (356)
                         .    +.....+| .++|||+  +|+|+++|++|++|++||+|++                              .|
T Consensus        94 ~~~~~~g~~~~~~~~P~~v~GhE~--~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G  171 (447)
T 4a0s_A           94 KQNARQGGWATRHDQPYHVLGSDC--SGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFG  171 (447)
T ss_dssp             HHHHTTCGGGGGGCCSEEECCSCE--EEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSC
T ss_pred             hhhcccCccccccCCCCcccccce--eEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCC
Confidence               0    01112345 7999995  9999999999999999999997                              38


Q ss_pred             ccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHH--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEE
Q 018404          107 GWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI--CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV  184 (356)
Q Consensus       107 ~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~--~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~V  184 (356)
                      +|+||+++++++ ++++ |+++++. ++|+++++++|||+++...  +++++|++|||+|++|++|++++|+|+.+|++|
T Consensus       172 ~~aey~~v~~~~-~~~i-P~~ls~~-~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~v  248 (447)
T 4a0s_A          172 GLAEYGVVRASQ-LLPK-PAHLTWE-EAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIP  248 (447)
T ss_dssp             SSBSEEEEEGGG-EEEC-CTTSCHH-HHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred             ceeeeeecCHHH-cEEC-CCCCCHH-HHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEE
Confidence            999999999999 9999 9996655 5777888999999999643  789999999999999999999999999999999


Q ss_pred             EEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCccc------------------HHHHHHHhCCCCccEEEeCCCc
Q 018404          185 VGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEND------------------LDAALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       185 i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~------------------~~~~~~~~~~~~~d~vid~~g~  246 (356)
                      ++++++++++          +.++ ++|++.++|+.+. +                  +.+.+++.+++++|++|||+|+
T Consensus       249 i~~~~~~~~~----------~~~~-~lGa~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          249 VAVVSSAQKE----------AAVR-ALGCDLVINRAEL-GITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             EEEESSHHHH----------HHHH-HTTCCCEEEHHHH-TCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             EEEeCCHHHH----------HHHH-hcCCCEEEecccc-cccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCc
Confidence            9999999998          8888 9999999987543 2                  3677888884499999999999


Q ss_pred             hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceee
Q 018404          247 KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDV  326 (356)
Q Consensus       247 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~  326 (356)
                      ..+..++++++++|+++.+|...+.     ....+...++.+++++.|+....     .+++.++++++++|++++.+++
T Consensus       317 ~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~  386 (447)
T 4a0s_A          317 VTFGLSVIVARRGGTVVTCGSSSGY-----LHTFDNRYLWMKLKKIVGSHGAN-----HEEQQATNRLFESGAVVPAMSA  386 (447)
T ss_dssp             HHHHHHHHHSCTTCEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEE
T ss_pred             hHHHHHHHHHhcCCEEEEEecCCCc-----ccccCHHHHHhCCCEEEecCCCC-----HHHHHHHHHHHHcCCcccceeE
Confidence            9999999999999999999975432     22345667788899998887765     4567789999999999999999


Q ss_pred             eeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          327 ADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       327 ~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      +|+|+++++||+.+.+++..||+||.+.+
T Consensus       387 ~~~l~~~~~A~~~~~~~~~~GKvvv~~~~  415 (447)
T 4a0s_A          387 VYPLAEAAEACRVVQTSRQVGKVAVLCMA  415 (447)
T ss_dssp             EEEGGGHHHHHHHHHTTCCSSEEEEESSC
T ss_pred             EEcHHHHHHHHHHHhcCCCceEEEEEeCC
Confidence            99999999999999999999999998753

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.3e-48  Score=364.46  Aligned_cols=308  Identities=19%  Similarity=0.211  Sum_probs=258.7

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc-CC--CCCCCCCCCCCccee
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF-NQ--DPDFSSFTPGSPIEG   82 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~-~~--~~~~~p~v~G~e~~~   82 (356)
                      ||++|||+++.++  |.    .++++  ++|.| +++++||+|||.+++||++|++.+.+ ..  ....+|.++|||+  
T Consensus         1 ~m~~mka~~~~~~--g~----~l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~--   69 (348)
T 2d8a_A            1 MSEKMVAIMKTKP--GY----GAELV--EVDVP-KPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEV--   69 (348)
T ss_dssp             --CEEEEEEECSS--SS----SCEEE--EEECC-CCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEE--
T ss_pred             CCCcceEEEEECC--CC----CEEEE--ECCCC-CCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccc--
Confidence            4567999999886  53    35665  55666 78999999999999999999998774 21  1245789999995  


Q ss_pred             cEEEEEecCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccc
Q 018404           83 FGVAKVVDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSY  132 (356)
Q Consensus        83 ~G~V~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~  132 (356)
                      +|+|+++|++|++|++||+|++.                              |+|+||++++++. ++++ |+++++. 
T Consensus        70 ~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-  146 (348)
T 2d8a_A           70 AGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQN-IWKN-PKSIPPE-  146 (348)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGG-EEEC-CTTSCHH-
T ss_pred             eEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHH-eEEC-CCCCCHH-
Confidence            99999999999999999999874                              7999999999998 9999 9995554 


Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      ++|.+ .++.|||+++ +.+++ +|++|||+|+ |++|++++|+|+.+|+ +|++++++++++          +.++ ++
T Consensus       147 ~aa~~-~~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~----------~~~~-~~  211 (348)
T 2d8a_A          147 YATLQ-EPLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRR----------ELAK-KV  211 (348)
T ss_dssp             HHTTH-HHHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH----------HHHH-HH
T ss_pred             HHHhh-hHHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----------HHHH-Hh
Confidence            45544 5888999999 66888 9999999997 9999999999999999 999999999998          8888 99


Q ss_pred             CCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccch-HHHHhh
Q 018404          212 GFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNL-MNVVYK  288 (356)
Q Consensus       212 g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~  288 (356)
                      |+++++|+++. ++.+.+++.+++ ++|+||||+|+ ..+..++++|+++|+++.+|.....      ...+. ..++.+
T Consensus       212 Ga~~~~~~~~~-~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~  284 (348)
T 2d8a_A          212 GADYVINPFEE-DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGK------VTIDFNNLIIFK  284 (348)
T ss_dssp             TCSEEECTTTS-CHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC------CCCCHHHHTTTT
T ss_pred             CCCEEECCCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC------cccCchHHHHhC
Confidence            99999999876 889999999887 99999999998 7889999999999999999975431      12344 556788


Q ss_pred             cceeeceeeecchhhHHHHHHHHHHHHHcCCC--ccceeeeeC-CCcHHHHHHHHHcCCCcceEEEEec
Q 018404          289 RIRMEGFVVFDYFPQYSRFLDAVLPYIREGKV--VYVEDVADG-LENAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l--~~~i~~~~~-l~~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      ++++.|+.....    .++++++++++++|++  ++.++++|+ |+++++||+.+.+ ...||+|++++
T Consensus       285 ~~~i~g~~~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          285 ALTIYGITGRHL----WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             TCEEEECCCCCS----HHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             CcEEEEecCCCc----HHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            999888754321    5678999999999995  577889999 9999999999977 56799999874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-48  Score=367.69  Aligned_cols=309  Identities=18%  Similarity=0.187  Sum_probs=265.2

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      |..+|||+++.++  |+    .++++  ++|.| +|+++||+|||.+++||++|++.+.+......+|.++|||+  +|+
T Consensus        14 ~~~~mka~~~~~~--g~----~l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~--~G~   82 (380)
T 1vj0_A           14 MGLKAHAMVLEKF--NQ----PLVYK--EFEIS-DIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEG--AGR   82 (380)
T ss_dssp             CCEEEEEEEBCST--TS----CCEEE--EEEEC-CCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEE--EEE
T ss_pred             hhhheEEEEEecC--CC----CeEEE--EccCC-CCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCc--EEE
Confidence            5578999999887  52    35665  45556 78999999999999999999998874332345789999995  999


Q ss_pred             EEEecCCCC------CCCCCCEEEE---------------------------------------ccccceeEee-cCCCc
Q 018404           86 AKVVDSGHP------EFKKGDLVWG---------------------------------------TTGWEEYSLI-KNPQG  119 (356)
Q Consensus        86 V~~vG~~v~------~~~~Gd~V~~---------------------------------------~g~~~~~~~v-~~~~~  119 (356)
                      |+++| +|+      +|++||+|++                                       .|+|+||+++ +++. 
T Consensus        83 V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~-  160 (380)
T 1vj0_A           83 VVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETD-  160 (380)
T ss_dssp             EEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCC-
T ss_pred             EEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccce-
Confidence            99999 999      9999999986                                       2789999999 9998 


Q ss_pred             ceeecCCCCCccchhcccCcchHHHHHHHHHHcC-CCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccc
Q 018404          120 LFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICA-PKKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLI  197 (356)
Q Consensus       120 l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~-~~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~  197 (356)
                      ++++ |+++++. +.|++..+++|||+++ +.++ +++|++|||+| +|++|++++|+|+.+| ++|++++++++++   
T Consensus       161 ~~~i-P~~l~~~-~~Aa~~~~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~---  233 (380)
T 1vj0_A          161 VLKV-SEKDDLD-VLAMAMCSGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRL---  233 (380)
T ss_dssp             EEEE-CTTSCHH-HHHHHTTHHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHH---
T ss_pred             EEEC-CCCCChH-HhHhhhcHHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHH---
Confidence            9999 9995443 2666666999999999 4578 99999999999 8999999999999999 5999999999998   


Q ss_pred             cchhHHHHHHHhhcCCCEEEecC---CcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEcccc-cc
Q 018404          198 PMQSQLVELLKNKFGFDDAFNYK---EENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMIS-QY  271 (356)
Q Consensus       198 ~~~~~~~~~~~~~~g~~~vv~~~---~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~  271 (356)
                             +.++ ++|+++++|++   +. ++.+.+++.+++ ++|+||||+|+ ..+..++++|+++|+++.+|... +.
T Consensus       234 -------~~~~-~lGa~~vi~~~~~~~~-~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~  304 (380)
T 1vj0_A          234 -------KLAE-EIGADLTLNRRETSVE-ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD  304 (380)
T ss_dssp             -------HHHH-HTTCSEEEETTTSCHH-HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCC
T ss_pred             -------HHHH-HcCCcEEEeccccCcc-hHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC
Confidence                   8898 99999999987   55 788889999887 99999999998 68999999999999999999754 21


Q ss_pred             CCCCCccccchHH-HHhhcceeeceeeecchhhHHHHHHHHHHHHHc--CCCccceeeeeCCCcHHHHHHHHHcCCCcce
Q 018404          272 NLSQPEGVHNLMN-VVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIRE--GKVVYVEDVADGLENAPAALVGLFSGRNVGK  348 (356)
Q Consensus       272 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk  348 (356)
                           ....+... ++.+++++.++....     .++++++++++++  |++++.++++|+|+++++||+.+.+++.. |
T Consensus       305 -----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-K  373 (380)
T 1vj0_A          305 -----PVPFKVYEWLVLKNATFKGIWVSD-----TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-K  373 (380)
T ss_dssp             -----CEEECHHHHTTTTTCEEEECCCCC-----HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-C
T ss_pred             -----CeeEchHHHHHhCCeEEEEeecCC-----HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-e
Confidence                 12344555 678999999887654     6789999999999  99999999999999999999999988888 9


Q ss_pred             EEEEec
Q 018404          349 QLVVVS  354 (356)
Q Consensus       349 ~vv~~~  354 (356)
                      +|++++
T Consensus       374 vvl~~~  379 (380)
T 1vj0_A          374 VILYPE  379 (380)
T ss_dssp             EEEECC
T ss_pred             EEEEeC
Confidence            999875

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=2.8e-49  Score=370.49  Aligned_cols=309  Identities=15%  Similarity=0.073  Sum_probs=260.1

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      +|.+|||+++.++  |.+    +++++.++|.| +++++||+|||.+++||++|++.+.+......+|.++|||+  +|+
T Consensus         3 ~p~~mka~~~~~~--~~~----l~~~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~--~G~   73 (360)
T 1piw_A            3 YPEKFEGIAIQSH--EDW----KNPKKTKYDPK-PFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEI--VGK   73 (360)
T ss_dssp             TTTCEEEEEECCS--SST----TSCEEEEECCC-CCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCE--EEE
T ss_pred             CChheEEEEEecC--CCC----eeEEeccccCC-CCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCc--eEE
Confidence            6778999999887  544    45654126667 78999999999999999999998874333345689999995  999


Q ss_pred             EEEecCCCC-CCCCCCEEEE--------------------------------------ccccceeEeecCCCcceeecCC
Q 018404           86 AKVVDSGHP-EFKKGDLVWG--------------------------------------TTGWEEYSLIKNPQGLFKIHHT  126 (356)
Q Consensus        86 V~~vG~~v~-~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~l~~~~p~  126 (356)
                      |+++|++|+ +|++||+|+.                                      .|+|+||++++++. ++++ |+
T Consensus        74 V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~  151 (360)
T 1piw_A           74 VVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHF-VVPI-PE  151 (360)
T ss_dssp             EEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGG-EEEC-CT
T ss_pred             EEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhh-eEEC-CC
Confidence            999999999 9999999931                                      27899999999998 9999 99


Q ss_pred             CCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHH
Q 018404          127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVEL  206 (356)
Q Consensus       127 ~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~  206 (356)
                      ++++. ++|++++++.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|++|++++++++++          +.
T Consensus       152 ~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~----------~~  218 (360)
T 1piw_A          152 NIPSH-LAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR----------ED  218 (360)
T ss_dssp             TSCHH-HHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH----------HH
T ss_pred             CCCHH-HhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH----------HH
Confidence            96555 578899999999999976 88999999999997 9999999999999999999999999998          89


Q ss_pred             HHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc---hHHHHHHHhhccCCeEEEEccccccCCCCCccccchH
Q 018404          207 LKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG---KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLM  283 (356)
Q Consensus       207 ~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  283 (356)
                      ++ ++|+++++|+++..++.+.+.    +++|+||||+|+   ..+..++++|+++|+++.+|....  .    ...+..
T Consensus       219 ~~-~lGa~~v~~~~~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~--~----~~~~~~  287 (360)
T 1piw_A          219 AM-KMGADHYIATLEEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ--H----EMLSLK  287 (360)
T ss_dssp             HH-HHTCSEEEEGGGTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS--S----CCEEEC
T ss_pred             HH-HcCCCEEEcCcCchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC--c----cccCHH
Confidence            98 899999999865213443333    479999999998   688899999999999999997543  1    012334


Q ss_pred             HHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCc--HHHHHHHHHcCCCcceEEEEecC
Q 018404          284 NVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLEN--APAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~--~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      .++.+++++.++....     .++++++++++++|++++.+ ++|+|++  +++||+.+.+++..||+|+++++
T Consensus       288 ~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~  355 (360)
T 1piw_A          288 PYGLKAVSISYSALGS-----IKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD  355 (360)
T ss_dssp             GGGCBSCEEEECCCCC-----HHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             HHHhCCeEEEEEecCC-----HHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence            4667889888876654     67789999999999999888 8999999  99999999998888999998864

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=3.8e-48  Score=361.02  Aligned_cols=310  Identities=19%  Similarity=0.205  Sum_probs=255.2

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||++++++  |.     +++  .++|.|+.++||||||||.++|||++|++.+.+. ....+|+++|||+  +|+|+++
T Consensus         1 MkAvv~~~~--g~-----l~v--~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~-~~~~~P~i~G~E~--~G~V~~v   68 (346)
T 4a2c_A            1 MKSVVNDTD--GI-----VRV--AESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKN-GAHYYPITLGHEF--SGYIDAV   68 (346)
T ss_dssp             CEEEEECSS--SC-----EEE--EECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSS-CSSSSSBCCCCEE--EEEEEEE
T ss_pred             CCEEEEecC--CC-----EEE--EEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCC-CCCCCCccccEEE--EEEEEEE
Confidence            899999886  42     345  5777773257999999999999999999877632 2346789999995  9999999


Q ss_pred             cCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhcccCc
Q 018404           90 DSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGM  139 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~  139 (356)
                      |++|+++++||+|++.                              |+|+||+++++++ ++++ |+++++. ++|.+ .
T Consensus        69 G~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~l~~~-~aa~l-~  144 (346)
T 4a2c_A           69 GSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKN-VFAL-PTDMPIE-DGAFI-E  144 (346)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGG-EEEC-CTTSCGG-GGGGH-H
T ss_pred             CCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchhe-EEEC-CCCCCHH-HHHhc-h
Confidence            9999999999999763                              7899999999999 9999 9996554 34444 3


Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      .+.++++++ ...++++|++|+|+| +|++|++++|+|+.+|+ .+++++++++++          +.++ ++|+++++|
T Consensus       145 ~~~~~~~~~-~~~~~~~g~~VlV~G-aG~vG~~aiq~ak~~G~~~vi~~~~~~~k~----------~~a~-~lGa~~~i~  211 (346)
T 4a2c_A          145 PITVGLHAF-HLAQGCENKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDISSEKL----------ALAK-SFGAMQTFN  211 (346)
T ss_dssp             HHHHHHHHH-HHTTCCTTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHH----------HHHH-HTTCSEEEE
T ss_pred             HHHHHHHHH-HHhccCCCCEEEEEC-CCCcchHHHHHHHHcCCcEEEEEechHHHH----------HHHH-HcCCeEEEe
Confidence            444555554 678999999999998 59999999999999998 567788888888          8899 999999999


Q ss_pred             cCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeecee
Q 018404          219 YKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFV  296 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (356)
                      +++. ++.+.+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|......   .....+...++.|++++.|++
T Consensus       212 ~~~~-~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~~~~k~~~i~G~~  287 (346)
T 4a2c_A          212 SSEM-SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDL---HLTSATFGKILRKELTVIGSW  287 (346)
T ss_dssp             TTTS-CHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCE---EECHHHHHHHHHHTCEEEECC
T ss_pred             CCCC-CHHHHHHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCc---cccccCHHHHhhceeEEEEEe
Confidence            9987 888888888877 99999999997 68899999999999999999754321   112234556788999999876


Q ss_pred             eecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcceEEEE
Q 018404          297 VFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGKQLVV  352 (356)
Q Consensus       297 ~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~  352 (356)
                      .........++++++++++++|+++  +.++++|+|+++++||+.+.+++..||+|+.
T Consensus       288 ~~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~  345 (346)
T 4a2c_A          288 MNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLI  345 (346)
T ss_dssp             TTCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred             ccccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEE
Confidence            5433222356789999999999885  5689999999999999999999999999985

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.6e-48  Score=360.16  Aligned_cols=307  Identities=18%  Similarity=0.158  Sum_probs=255.7

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCC--CCCCCCCCCCCcceec
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQ--DPDFSSFTPGSPIEGF   83 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~--~~~~~p~v~G~e~~~~   83 (356)
                      +++|||++++++  +     .+++  .++|.| +++++||+|||.+++||++|++.+. ...  ....+|.++|||+  +
T Consensus         2 ~~~mka~~~~~~--~-----~l~~--~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~--~   69 (352)
T 1e3j_A            2 ASDNLSAVLYKQ--N-----DLRL--EQRPIP-EPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEA--S   69 (352)
T ss_dssp             --CCEEEEEEET--T-----EEEE--EECCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEE--E
T ss_pred             cccCEEEEEEcC--C-----cEEE--EEecCC-CCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccc--e
Confidence            457999999874  2     2455  567777 7899999999999999999998776 221  1235689999995  9


Q ss_pred             EEEEEecCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCCCCccc
Q 018404           84 GVAKVVDSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSY  132 (356)
Q Consensus        84 G~V~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~  132 (356)
                      |+|+++|++|++|++||+|++                               .|+|+||++++++. ++++ |+++++  
T Consensus        70 G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~~~~--  145 (352)
T 1e3j_A           70 GTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF-CHKL-PDNVSL--  145 (352)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTSCH--
T ss_pred             EEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHH-eEEC-cCCCCH--
Confidence            999999999999999999986                               27899999999999 9999 999544  


Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      +.|++..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++|++++++++++          +.++ ++|
T Consensus       146 ~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~----------~~~~-~lG  212 (352)
T 1e3j_A          146 EEGALLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRL----------EVAK-NCG  212 (352)
T ss_dssp             HHHHTHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHH-HTT
T ss_pred             HHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHH----------HHHH-HhC
Confidence            4344556889999999 5689999999999995 9999999999999999999999999998          8888 999


Q ss_pred             CCEEEecCC-cccHHHHHHHhCC---C-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH
Q 018404          213 FDDAFNYKE-ENDLDAALKRCFP---E-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV  286 (356)
Q Consensus       213 ~~~vv~~~~-~~~~~~~~~~~~~---~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  286 (356)
                      +++++|+++ . ++.+.+.+.++   + ++|++|||+|+ ..+..++++|+++|+++.+|....      ....+...++
T Consensus       213 a~~~~~~~~~~-~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~  285 (352)
T 1e3j_A          213 ADVTLVVDPAK-EEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNAC  285 (352)
T ss_dssp             CSEEEECCTTT-SCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHH
T ss_pred             CCEEEcCcccc-cHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccccHHHHH
Confidence            999999874 4 67778887765   4 89999999998 478999999999999999986322      1224456778


Q ss_pred             hhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCC-CcceEEEEecC
Q 018404          287 YKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGR-NVGKQLVVVSR  355 (356)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~-~~gk~vv~~~~  355 (356)
                      .+++++.++...      .++++++++++++|+++  +.++++|+|+++++||+.+.+++ ..||+|+++++
T Consensus       286 ~~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          286 AREIDIKSVFRY------CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             TTTCEEEECCSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             hcCcEEEEeccc------hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            899998887543      23578899999999864  67888999999999999999887 68999999864

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=2.8e-48  Score=362.64  Aligned_cols=307  Identities=15%  Similarity=0.130  Sum_probs=257.1

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhh-ccCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARM-SFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~-~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||++++++  |++     .+  .++|.| +++++||+|||.+++||++|++.+ .+. ....+|.++|||+  +|+|++
T Consensus         1 MkA~~~~~~--~~~-----~~--~e~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~~g~-~~~~~p~v~G~E~--~G~V~~   67 (352)
T 3fpc_A            1 MKGFAMLSI--GKV-----GW--IEKEKP-APGPFDAIVRPLAVAPCTSDIHTVFEGA-IGERHNMILGHEA--VGEVVE   67 (352)
T ss_dssp             CEEEEEEET--TEE-----EE--EECCCC-CCCTTCEEEEEEEEECCHHHHHHHHSCT-TCCCSSEECCCEE--EEEEEE
T ss_pred             CeEEEEccC--CCc-----eE--EeCCCC-CCCCCeEEEEeCEEeEcccchHHHhCCC-CCCCCCcccCCcc--eEEEEE
Confidence            799999987  443     45  467777 789999999999999999999844 432 2345789999995  999999


Q ss_pred             ecCCCCCCCCCCEEEE---------------------------------ccccceeEeecCC--CcceeecCCCCCccch
Q 018404           89 VDSGHPEFKKGDLVWG---------------------------------TTGWEEYSLIKNP--QGLFKIHHTDVPLSYY  133 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~l~~~~p~~~~~~~~  133 (356)
                      +|++|++|++||+|++                                 .|+|+||+++++.  . ++++ |+++++. +
T Consensus        68 vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~-~~~i-P~~~~~~-~  144 (352)
T 3fpc_A           68 VGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMN-LAHL-PKEIPLE-A  144 (352)
T ss_dssp             ECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHH-CEEC-CTTSCHH-H
T ss_pred             ECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCe-EEEC-CCCCCHH-H
Confidence            9999999999999984                                 2799999999976  6 9999 9996555 5


Q ss_pred             hcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          134 TGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       134 ~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      ++.++.++.|||+++ +.+++++|++|||+| +|++|++++|+|+.+|+ +|++++++++++          +.++ ++|
T Consensus       145 aa~~~~~~~ta~~al-~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~----------~~~~-~lG  211 (352)
T 3fpc_A          145 AVMIPDMMTTGFHGA-ELANIKLGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAVGSRKHCC----------DIAL-EYG  211 (352)
T ss_dssp             HTTTTTHHHHHHHHH-HHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSSEEEECCCHHHH----------HHHH-HHT
T ss_pred             HhhccchhHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH----------HHHH-HhC
Confidence            777889999999999 668999999999998 69999999999999999 899999999988          8898 999


Q ss_pred             CCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccch--HHHHhh
Q 018404          213 FDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNL--MNVVYK  288 (356)
Q Consensus       213 ~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~  288 (356)
                      +++++|+++. ++.+.+++.+++ ++|+||||+|+ ..+..++++|+++|+++.+|......    ......  .....+
T Consensus       212 a~~vi~~~~~-~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~----~~~~~~~~~~~~~~  286 (352)
T 3fpc_A          212 ATDIINYKNG-DIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGD----NIDIPRSEWGVGMG  286 (352)
T ss_dssp             CCEEECGGGS-CHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCS----EEEEETTTTGGGTB
T ss_pred             CceEEcCCCc-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCC----ceecchhHhhhhcc
Confidence            9999999886 899999999988 99999999999 78999999999999999999754311    111111  122346


Q ss_pred             cceeeceeeecchhhHHHHHHHHHHHHHcCCCccc--eeeeeC-CCcHHHHHHHHHcCCCc-ceEEEEec
Q 018404          289 RIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYV--EDVADG-LENAPAALVGLFSGRNV-GKQLVVVS  354 (356)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~--i~~~~~-l~~~~~a~~~~~~~~~~-gk~vv~~~  354 (356)
                      ++++.++....    ..++++++++++++|++++.  ++++|+ |+++++||+.+.++... +|+|++++
T Consensus       287 ~~~i~g~~~~~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          287 HKHIHGGLCPG----GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             CEEEEEBCCCC----HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             ccEEEEeeccC----chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            67777665422    15678999999999999864  888998 99999999999886554 89999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=8.5e-48  Score=359.87  Aligned_cols=306  Identities=16%  Similarity=0.155  Sum_probs=256.3

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc-CC--CCCCCCCCCCCcceec
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF-NQ--DPDFSSFTPGSPIEGF   83 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~-~~--~~~~~p~v~G~e~~~~   83 (356)
                      +|+|||+++.++  +     .+++  .++|.| +++++||+|||.++|||++|++.+.+ ..  ....+|.++|||+  +
T Consensus         5 ~~~mka~~~~~~--~-----~l~~--~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~--~   72 (356)
T 1pl8_A            5 KPNNLSLVVHGP--G-----DLRL--ENYPIP-EPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEA--S   72 (356)
T ss_dssp             CCCCEEEEEEET--T-----EEEE--EECCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEE--E
T ss_pred             ccCceEEEEecC--C-----cEEE--EEccCC-CCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccce--E
Confidence            356999999874  2     2445  566777 78999999999999999999987762 11  1234689999995  9


Q ss_pred             EEEEEecCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceeecCCCCCccc
Q 018404           84 GVAKVVDSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPLSY  132 (356)
Q Consensus        84 G~V~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~  132 (356)
                      |+|+++|++|++|++||+|++                               .|+|+||++++++. ++++ |+++++. 
T Consensus        73 G~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~l~~~-  149 (356)
T 1pl8_A           73 GTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF-CYKL-PDNVTFE-  149 (356)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTSCHH-
T ss_pred             EEEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHH-EEEC-cCCCCHH-
Confidence            999999999999999999986                               27999999999998 9999 9995554 


Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      ++ ++..++.|||+++ +.+++++|++|||+| +|++|++++|+|+.+|+ +|++++++++++          +.++ ++
T Consensus       150 ~a-a~~~~~~ta~~al-~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~----------~~a~-~l  215 (356)
T 1pl8_A          150 EG-ALIEPLSVGIHAC-RRGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRL----------SKAK-EI  215 (356)
T ss_dssp             HH-HHHHHHHHHHHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHH----------HHHH-HT
T ss_pred             HH-HhhchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHH----------HHHH-Hh
Confidence            34 4456889999999 568999999999999 59999999999999999 999999999998          8898 99


Q ss_pred             CCCEEEecC---CcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHh
Q 018404          212 GFDDAFNYK---EENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVY  287 (356)
Q Consensus       212 g~~~vv~~~---~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  287 (356)
                      |+++++|++   .. ++.+.+++.+++++|+||||+|+ ..+..++++|+++|+++.+|....      ....+...++.
T Consensus       216 Ga~~vi~~~~~~~~-~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~  288 (356)
T 1pl8_A          216 GADLVLQISKESPQ-EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAI  288 (356)
T ss_dssp             TCSEEEECSSCCHH-HHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHH
T ss_pred             CCCEEEcCcccccc-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHh
Confidence            999999987   24 67778887776689999999998 578999999999999999986321      12245567788


Q ss_pred             hcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          288 KRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      +++++.++...      .+.++++++++++|+++  +.++++|+|+++++||+.+.++ ..||+|+++++
T Consensus       289 ~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~  351 (356)
T 1pl8_A          289 REVDIKGVFRY------CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDP  351 (356)
T ss_dssp             TTCEEEECCSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCT
T ss_pred             cceEEEEeccc------HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCC
Confidence            99998887543      23578899999999864  6788999999999999999988 78999999865

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7e-48  Score=361.77  Aligned_cols=306  Identities=18%  Similarity=0.200  Sum_probs=254.8

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEE
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V   86 (356)
                      .++|+++++.++  ++    .+++  .++|.| +++++||+|||.++|||++|++.+.+......+|.++|||+  +|+|
T Consensus        20 ~~~~~a~~~~~~--~~----~l~~--~~~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~--~G~V   88 (369)
T 1uuf_A           20 GLKIKAVGAYSA--KQ----PLEP--MDITRR-EPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEI--VGRV   88 (369)
T ss_dssp             ---CEEEEBSST--TS----CCEE--EECCCC-CCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCE--EEEE
T ss_pred             CceEEEEEEcCC--CC----CcEE--EEecCC-CCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCc--eEEE
Confidence            467889887654  33    3566  466677 78999999999999999999998874333345789999995  9999


Q ss_pred             EEecCCCCCCCCCCEEEE---------------------------------------ccccceeEeecCCCcceeecCCC
Q 018404           87 KVVDSGHPEFKKGDLVWG---------------------------------------TTGWEEYSLIKNPQGLFKIHHTD  127 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~---------------------------------------~g~~~~~~~v~~~~~l~~~~p~~  127 (356)
                      +++|++|++|++||+|++                                       .|+|+||++++++. ++++ |++
T Consensus        89 ~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~-~~~~-P~~  166 (369)
T 1uuf_A           89 VAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERY-VLRI-RHP  166 (369)
T ss_dssp             EEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGG-CEEC-CSC
T ss_pred             EEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchh-EEEC-CCC
Confidence            999999999999999983                                       17899999999998 9999 998


Q ss_pred             -CCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHH
Q 018404          128 -VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVEL  206 (356)
Q Consensus       128 -~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~  206 (356)
                       +++. ++|+++++++|||+++.+ .++++|++|||+|+ |++|++++|+|+.+|++|++++++++++          +.
T Consensus       167 ~ls~~-~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~----------~~  233 (369)
T 1uuf_A          167 QEQLA-AVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR----------EA  233 (369)
T ss_dssp             GGGHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH----------HH
T ss_pred             CCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HH
Confidence             8776 688899999999999976 68999999999995 9999999999999999999999999998          88


Q ss_pred             HHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH
Q 018404          207 LKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV  285 (356)
Q Consensus       207 ~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  285 (356)
                      ++ ++|++.++|+.+. ++.   .+.. +++|+||||+|+ ..+..++++|+++|+++.+|.....     ....+...+
T Consensus       234 a~-~lGa~~vi~~~~~-~~~---~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~  302 (369)
T 1uuf_A          234 AK-ALGADEVVNSRNA-DEM---AAHL-KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATP-----HKSPEVFNL  302 (369)
T ss_dssp             HH-HHTCSEEEETTCH-HHH---HTTT-TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHH
T ss_pred             HH-HcCCcEEeccccH-HHH---HHhh-cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCC-----ccccCHHHH
Confidence            98 8999999998774 433   3333 479999999998 4799999999999999999975431     112345567


Q ss_pred             HhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          286 VYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      +.+++++.++....     .++++++++++++|++++.+. .|+|+++++|++.+.+++..||+|+.+++
T Consensus       303 ~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          303 IMKRRAIAGSMIGG-----IPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             HTTTCEEEECCSCC-----HHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             HhCCcEEEEeecCC-----HHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            88999999887654     567899999999999998775 69999999999999998888999998754

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=3.4e-48  Score=360.94  Aligned_cols=301  Identities=19%  Similarity=0.187  Sum_probs=237.0

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCC--CCCCCCCCCCcceecEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD--PDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~--~~~~p~v~G~e~~~~G~   85 (356)
                      .+|||+++.++  |.+    ++++  ++|.| +++++||+|||.+++||++|++.+.+...  ...+|.++|||+  +|+
T Consensus         2 ~~mka~~~~~~--g~~----l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~--~G~   70 (344)
T 2h6e_A            2 VKSKAALLKKF--SEP----LSIE--DVNIP-EPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHEN--AGT   70 (344)
T ss_dssp             EEEEBCEECSC--CC-----------EEEEC-CCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCE--EEE
T ss_pred             ceeEEEEEecC--CCC----CeEE--EeeCC-CCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccc--eEE
Confidence            47999999887  543    4554  55566 78999999999999999999998874322  335789999995  999


Q ss_pred             EEEecCCCCCCCCCCEEEEc------------------------------cccceeEeec-CCCcceeecCCCCCccchh
Q 018404           86 AKVVDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIK-NPQGLFKIHHTDVPLSYYT  134 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~-~~~~l~~~~p~~~~~~~~~  134 (356)
                      |+++|++ ++|++||+|++.                              |+|+||++++ ++. ++++  +++++. ++
T Consensus        71 V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~-~~~i--~~l~~~-~a  145 (344)
T 2h6e_A           71 IVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRW-LVKL--NSLSPV-EA  145 (344)
T ss_dssp             EEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGG-EEEE--SSSCHH-HH
T ss_pred             EEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCccc-EEEe--CCCCHH-Hh
Confidence            9999999 999999999853                              7899999999 998 9998  564444 57


Q ss_pred             cccCcchHHHHHHHHHH----cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHH
Q 018404          135 GILGMPGMTAWAGFYEI----CAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLK  208 (356)
Q Consensus       135 a~l~~~~~tA~~~l~~~----~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~  208 (356)
                      |+++++++|||+++...    +++ +|++|||+|+ |++|++++|+|+.+  |++|++++++++++          +.++
T Consensus       146 a~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~----------~~~~  213 (344)
T 2h6e_A          146 APLADAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHR----------DFAL  213 (344)
T ss_dssp             GGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHH----------HHHH
T ss_pred             hhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHH----------HHHH
Confidence            88999999999999765    288 9999999997 99999999999999  99999999999998          8898


Q ss_pred             hhcCCCEEEecCC-cccHHHHHHHhCCC-CccEEEeCCCch-HHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH
Q 018404          209 NKFGFDDAFNYKE-ENDLDAALKRCFPE-GIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV  285 (356)
Q Consensus       209 ~~~g~~~vv~~~~-~~~~~~~~~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  285 (356)
                       ++|+++++|+++ . ++   +.+.+.+ ++|+||||+|+. .+..++++|+++|+++.+|.....      ...+...+
T Consensus       214 -~lGa~~vi~~~~~~-~~---~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~  282 (344)
T 2h6e_A          214 -ELGADYVSEMKDAE-SL---INKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR------VSLEAFDT  282 (344)
T ss_dssp             -HHTCSEEECHHHHH-HH---HHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSC------CCCCHHHH
T ss_pred             -HhCCCEEeccccch-HH---HHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCC------cccCHHHH
Confidence             999999998764 3 33   3444545 899999999995 999999999999999999975421      13455667


Q ss_pred             HhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          286 VYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +.+++++.++....     .++++++++++++|++++.+ ++|+|+++++||+.+.+++..||+|+++
T Consensus       283 ~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          283 AVWNKKLLGSNYGS-----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             HHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             hhCCcEEEEEecCC-----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            88999999876654     67899999999999999988 9999999999999999888889999863

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.1e-47  Score=357.89  Aligned_cols=305  Identities=20%  Similarity=0.227  Sum_probs=262.7

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCC--------CCCCCCCCCCcce
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD--------PDFSSFTPGSPIE   81 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~--------~~~~p~v~G~e~~   81 (356)
                      |||++++++  |.+    +++  .++|.| +++++||+|||.+++||++|++.+.+...        ...+|.++|||+ 
T Consensus         1 Mka~~~~~~--g~~----l~~--~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~-   70 (347)
T 1jvb_A            1 MRAVRLVEI--GKP----LSL--QEIGVP-KPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI-   70 (347)
T ss_dssp             CEEEEECST--TSC----CEE--EECCCC-CCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEE-
T ss_pred             CeEEEEecC--CCC----eEE--EEeeCC-CCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccc-
Confidence            789999887  654    455  456777 78999999999999999999998763211        235789999995 


Q ss_pred             ecEEEEEecCCCCCCCCCCEEEEc------------------------------cccceeEeecC-CCcceeecCCCCCc
Q 018404           82 GFGVAKVVDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKN-PQGLFKIHHTDVPL  130 (356)
Q Consensus        82 ~~G~V~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~-~~~l~~~~p~~~~~  130 (356)
                       +|+|+++|++|++|++||+|++.                              |+|+||+++++ +. ++++  +++++
T Consensus        71 -~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~-~~~i--~~~~~  146 (347)
T 1jvb_A           71 -AGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY-MYKL--RRLNA  146 (347)
T ss_dssp             -EEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGG-EEEC--SSSCH
T ss_pred             -eEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccc-eEEe--CCCCH
Confidence             99999999999999999999752                              78999999999 88 9998  56444


Q ss_pred             cchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHh
Q 018404          131 SYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKN  209 (356)
Q Consensus       131 ~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~  209 (356)
                      . ++|++++++.|||+++.. +++++|++|||+|++|++|++++|+++.+ |++|++++++++++          +.++ 
T Consensus       147 ~-~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~----------~~~~-  213 (347)
T 1jvb_A          147 V-EAAPLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV----------EAAK-  213 (347)
T ss_dssp             H-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH----------HHHH-
T ss_pred             H-HcccchhhHHHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHH----------HHHH-
Confidence            4 577899999999999964 88999999999998889999999999999 99999999999888          8888 


Q ss_pred             hcCCCEEEecCCcccHHHHHHHhCC-CCccEEEeCCCch-HHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHh
Q 018404          210 KFGFDDAFNYKEENDLDAALKRCFP-EGIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVY  287 (356)
Q Consensus       210 ~~g~~~vv~~~~~~~~~~~~~~~~~-~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  287 (356)
                      ++|++.++|+.+. ++.+.+.+.+. +++|++||++|+. .+..++++|+++|+++.+|.....     . ..+...++.
T Consensus       214 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~-~~~~~~~~~  286 (347)
T 1jvb_A          214 RAGADYVINASMQ-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGAD-----L-HYHAPLITL  286 (347)
T ss_dssp             HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCC-----C-CCCHHHHHH
T ss_pred             HhCCCEEecCCCc-cHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC-----C-CCCHHHHHh
Confidence            8999999998876 78888888886 5899999999995 889999999999999999975411     1 345556788


Q ss_pred             hcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          288 KRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +++++.++....     .++++++++++++|++++.++++|+|+++++||+.+.+++..||+|+++
T Consensus       287 ~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          287 SEIQFVGSLVGN-----QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             HTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CceEEEEEeccC-----HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            999999877655     6789999999999999999999999999999999999998889999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.5e-47  Score=358.32  Aligned_cols=307  Identities=17%  Similarity=0.170  Sum_probs=256.3

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      .+|+|+++++.+.    +.  .+++  .++|.| +++++||+|||.++|||++|++.+.+......+|.++|||+  +|+
T Consensus         6 ~~m~~~a~~~~~~----~~--~l~~--~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~--~G~   74 (357)
T 2cf5_A            6 AERKTTGWAARDP----SG--ILSP--YTYTLR-ETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEV--VGE   74 (357)
T ss_dssp             CCCEEEEEEECST----TC--CEEE--EEEECC-CCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEE--EEE
T ss_pred             CcceeEEEEEccC----CC--CcEE--EEecCC-CCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcce--eEE
Confidence            5677888777553    32  3555  456666 78999999999999999999998874333345789999995  999


Q ss_pred             EEEecCCCCCCCCCCEEEE--------------------------------------ccccceeEeecCCCcceeecCCC
Q 018404           86 AKVVDSGHPEFKKGDLVWG--------------------------------------TTGWEEYSLIKNPQGLFKIHHTD  127 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~l~~~~p~~  127 (356)
                      |+++|++|++|++||+|++                                      .|+|+||++++++. ++++ |++
T Consensus        75 V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~  152 (357)
T 2cf5_A           75 VVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKF-VVKI-PEG  152 (357)
T ss_dssp             EEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGG-EEEC-CSS
T ss_pred             EEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhh-EEEC-cCC
Confidence            9999999999999999973                                      37899999999998 9999 999


Q ss_pred             CCccchhcccCcchHHHHHHHHHHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHH
Q 018404          128 VPLSYYTGILGMPGMTAWAGFYEICAPK-KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVEL  206 (356)
Q Consensus       128 ~~~~~~~a~l~~~~~tA~~~l~~~~~~~-~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~  206 (356)
                      +++. ++|+++++++|||+++.+ .+++ +|++|+|+| +|++|++++|+|+.+|++|++++++++++          +.
T Consensus       153 ls~~-~aa~l~~~~~ta~~~l~~-~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~----------~~  219 (357)
T 2cf5_A          153 MAVE-QAAPLLCAGVTVYSPLSH-FGLKQPGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSNKKR----------EE  219 (357)
T ss_dssp             CCHH-HHTGGGTHHHHHHHHHHH-TSTTSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSTTHH----------HH
T ss_pred             CCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCChHHH----------HH
Confidence            6555 588899999999999965 6788 999999999 69999999999999999999999998887          77


Q ss_pred             HHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH
Q 018404          207 LKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV  285 (356)
Q Consensus       207 ~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  285 (356)
                      +++++|+++++|+++.    +.+++.++ ++|+||||+|+ ..+..++++|+++|+++.+|.....     ....+.. +
T Consensus       220 ~~~~lGa~~vi~~~~~----~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~-~  288 (357)
T 2cf5_A          220 ALQDLGADDYVIGSDQ----AKMSELAD-SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNP-----LQFLTPL-L  288 (357)
T ss_dssp             HHTTSCCSCEEETTCH----HHHHHSTT-TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSC-----CCCCHHH-H
T ss_pred             HHHHcCCceeeccccH----HHHHHhcC-CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCC-----ccccCHH-H
Confidence            7658999999998753    34555553 79999999998 4789999999999999999975432     1113344 7


Q ss_pred             HhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          286 VYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      +.+++++.++....     .++++++++++++|++++.+ ++|+|+++++||+.+.+++..||+|+.+++
T Consensus       289 ~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          289 MLGRKVITGSFIGS-----MKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             HHHTCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             HhCccEEEEEccCC-----HHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            88999999887654     56789999999999999876 689999999999999999888999999865

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=3e-48  Score=368.79  Aligned_cols=313  Identities=16%  Similarity=0.148  Sum_probs=263.0

Q ss_pred             ccccEEEEeecccCCCCccce---------------------EEEEeecccccC-CCCCeEEEEEEEeecCHHhhhhhcc
Q 018404            8 LSNKQVILKNYVEGFPKETDM---------------------LVKASSISLKVE-EGSNAILVKNLYLSCDPYMRARMSF   65 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l---------------------~~~~~~~~~p~~-~~~~evlV~v~~~~i~~~d~~~~~~   65 (356)
                      |+|||++++.+  |.|.+...                     .++..++|.| + ++++||+|||.+++||++|++.+.+
T Consensus         1 ~~m~a~~~~~~--~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P-~~~~~~eVlVkv~a~gi~~~D~~~~~g   77 (404)
T 3ip1_A            1 MSLRAVRLHAK--WDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEP-RIEKPTEIIIKVKACGICGSDVHMAQT   77 (404)
T ss_dssp             -CEEEEEEEEE--ECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCC-CCCSTTEEEEEEEEEECCHHHHHHHCB
T ss_pred             CcceEEEecCC--CCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCC-CCCCcCEEEEEEeEeeeCHHHHHHhcC
Confidence            46899999988  77752211                     3455677777 6 8999999999999999999998763


Q ss_pred             C-------CCCCCCCCCCCCcceecEEEEEecCCC------CCCCCCCEEEE----------------------------
Q 018404           66 N-------QDPDFSSFTPGSPIEGFGVAKVVDSGH------PEFKKGDLVWG----------------------------  104 (356)
Q Consensus        66 ~-------~~~~~~p~v~G~e~~~~G~V~~vG~~v------~~~~~Gd~V~~----------------------------  104 (356)
                      .       .....+|.++|||+  +|+|+++|++|      ++|++||+|++                            
T Consensus        78 ~~~~~~~~~~~~~~P~i~G~E~--~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~  155 (404)
T 3ip1_A           78 DEEGYILYPGLTGFPVTLGHEF--SGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGF  155 (404)
T ss_dssp             CTTSBBSCCSCBCSSEECCCEE--EEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTT
T ss_pred             CCCccccccccCCCCcccCccc--eEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCC
Confidence            2       22346789999995  99999999999      88999999997                            


Q ss_pred             --ccccceeEeecCCCcceeecCCCCCc-----cchhcccCcchHHHHHHHHHH-cCCCCCCEEEEecCCchHHHHHHHH
Q 018404          105 --TTGWEEYSLIKNPQGLFKIHHTDVPL-----SYYTGILGMPGMTAWAGFYEI-CAPKKGEYIYVSAASGAVGQLVGQF  176 (356)
Q Consensus       105 --~g~~~~~~~v~~~~~l~~~~p~~~~~-----~~~~a~l~~~~~tA~~~l~~~-~~~~~g~~VlI~ga~g~vG~~ai~l  176 (356)
                        .|+|+||++++++. ++++ |++++.     ..++|+++.++.|||+++... +++++|++|||+|+ |++|++++|+
T Consensus       156 ~~~G~~aey~~v~~~~-~~~i-P~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiql  232 (404)
T 3ip1_A          156 NVDGAFAEYVKVDAKY-AWSL-RELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAI  232 (404)
T ss_dssp             TBCCSSBSEEEEEGGG-EEEC-GGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHH
T ss_pred             CCCCCCcceEEechHH-eEec-cccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHH
Confidence              38999999999998 9999 887542     225888999999999999654 48999999999996 9999999999


Q ss_pred             HHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCch--HHHHH
Q 018404          177 AKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGK--MLDAV  252 (356)
Q Consensus       177 a~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~--~~~~~  252 (356)
                      |+.+|+ +|++++++++++          +.++ ++|+++++|+++. ++.+.+++.+++ ++|+||||+|+.  .+..+
T Consensus       233 ak~~Ga~~Vi~~~~~~~~~----------~~~~-~lGa~~vi~~~~~-~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~  300 (404)
T 3ip1_A          233 LKHAGASKVILSEPSEVRR----------NLAK-ELGADHVIDPTKE-NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQI  300 (404)
T ss_dssp             HHHTTCSEEEEECSCHHHH----------HHHH-HHTCSEEECTTTS-CHHHHHHHHTTTCCCSEEEECSSCHHHHHHHH
T ss_pred             HHHcCCCEEEEECCCHHHH----------HHHH-HcCCCEEEcCCCC-CHHHHHHHHhCCCCCCEEEECCCCcHHHHHHH
Confidence            999999 999999999998          8898 9999999999887 899999999988 999999999996  67778


Q ss_pred             HHhh----ccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--cceee
Q 018404          253 LLNM----RLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--YVEDV  326 (356)
Q Consensus       253 ~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~~i~~  326 (356)
                      +++|    +++|+++.+|.....      ...+...++.+++++.|+.....    .++++++++++++| ++  +.+++
T Consensus       301 ~~~l~~~~~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~ll~~g-l~~~~~i~~  369 (404)
T 3ip1_A          301 EEVIWRARGINATVAIVARADAK------IPLTGEVFQVRRAQIVGSQGHSG----HGTFPRVISLMASG-MDMTKIISK  369 (404)
T ss_dssp             HHHHHHCSCCCCEEEECSCCCSC------EEECHHHHHHTTCEEEECCCCCS----TTHHHHHHHHHHTT-CCGGGGCCE
T ss_pred             HHHHHhccCCCcEEEEeCCCCCC------CcccHHHHhccceEEEEecCCCc----hHHHHHHHHHHHcC-CChhheEEE
Confidence            8888    999999999985432      24567778899999998865332    35688999999999 65  56889


Q ss_pred             eeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          327 ADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       327 ~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      +|+|+++++||+.+.    .||+|+++++
T Consensus       370 ~~~l~~~~~A~~~~~----~GKvvl~~~~  394 (404)
T 3ip1_A          370 TVSMEEIPEYIKRLQ----TDKSLVKVTM  394 (404)
T ss_dssp             EECGGGHHHHHHHTT----TCTTCSCEEE
T ss_pred             EeeHHHHHHHHHHHh----CCcEEEecCC
Confidence            999999999999887    5788887754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=7.4e-47  Score=350.46  Aligned_cols=322  Identities=39%  Similarity=0.674  Sum_probs=262.9

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEE
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V   86 (356)
                      +++||++++.+++.|.|.+..++++  ++|.| +++++||+|||.++|||+.|+...    ....+|.++|||.  +|+|
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~--e~~~P-~~~~~eVlVkv~a~gi~~~~~~~~----~~~~~p~~~g~e~--~G~V   75 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELK--TVELP-PLKNGEVLLEALFLSVDPYMRIAS----KRLKEGAVMMGQQ--VARV   75 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEE--EEECC-CCCTTCEEEEEEEEECCTHHHHHT----TTCCTTSBCCCCE--EEEE
T ss_pred             cccccEEEEeecCCCCCCccceEEE--eCCCC-CCCCCEEEEEEEEeccCHHHcccc----CcCCCCcccccce--EEEE
Confidence            4679999999865566655677775  45556 789999999999999999987321    2345678999995  7888


Q ss_pred             EEecCCCCCCCCCCEEEEccccceeEeecCCCcceeecCCC----CCccchhcccCcchHHHHHHHHHHcCCCCCCEEEE
Q 018404           87 KVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTD----VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYV  162 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~l~~~~p~~----~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI  162 (356)
                      ++.  ++++|++||+|++.|+|+||++++++. ++++ |++    +++...+|+++++++|||+++.+.+++++|++|+|
T Consensus        76 v~~--~v~~~~vGdrV~~~g~~aey~~v~~~~-~~~i-P~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV  151 (333)
T 1v3u_A           76 VES--KNSAFPAGSIVLAQSGWTTHFISDGKG-LEKL-LTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLV  151 (333)
T ss_dssp             EEE--SCTTSCTTCEEEECCCSBSEEEESSTT-EEEC-C--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEE
T ss_pred             Eec--CCCCCCCCCEEEecCceEEEEEechHH-eEEc-CcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEE
Confidence            875  678999999999999999999999999 9999 886    55552258999999999999977789999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCC-cccHHHHHHHhCCCCccEEE
Q 018404          163 SAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE-ENDLDAALKRCFPEGIDIYF  241 (356)
Q Consensus       163 ~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~~~~~~~~d~vi  241 (356)
                      +|++|++|++++|+++..|++|++++++++++          +.++ ++|++.++|+.+ . ++.+.+.+.+.+++|++|
T Consensus       152 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~----------~~~~-~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi  219 (333)
T 1v3u_A          152 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI----------AYLK-QIGFDAAFNYKTVN-SLEEALKKASPDGYDCYF  219 (333)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHH-HTTCSEEEETTSCS-CHHHHHHHHCTTCEEEEE
T ss_pred             ecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-hcCCcEEEecCCHH-HHHHHHHHHhCCCCeEEE
Confidence            99999999999999999999999999998887          8887 899998999877 5 888888888766899999


Q ss_pred             eCCCchHHHHHHHhhccCCeEEEEccccccCCCC-CccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHHHHHcCC
Q 018404          242 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQ-PEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       242 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~g~  319 (356)
                      ||+|+..+..++++|+++|+++.+|......... .....+...++.+++++.|+....+ +....+.++++++++++|+
T Consensus       220 ~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~  299 (333)
T 1v3u_A          220 DNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGK  299 (333)
T ss_dssp             ESSCHHHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTS
T ss_pred             ECCChHHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCC
Confidence            9999988999999999999999999754321000 0011245567889999998876554 2445778999999999999


Q ss_pred             CccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          320 VVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       320 l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +++.+...++|+++++||+.+.+++..||+|+++
T Consensus       300 l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          300 IQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             SCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             ccCccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9988777789999999999999988899999874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=1.9e-48  Score=362.50  Aligned_cols=304  Identities=18%  Similarity=0.179  Sum_probs=257.2

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCC---CCCCCCCCCCcceecEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD---PDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~---~~~~p~v~G~e~~~~G~V   86 (356)
                      |||+++.++  |.|    ++++  ++|.| +++++||+|||.++|||++|++.+.+...   ...+|.++|||+  +|+|
T Consensus         1 Mka~~~~~~--g~~----l~~~--~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~--~G~V   69 (343)
T 2dq4_A            1 MRALAKLAP--EEG----LTLV--DRPVP-EPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEF--SGVV   69 (343)
T ss_dssp             CEEEEECSS--SSS----CEEE--ECCCC-CCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEE--EEEE
T ss_pred             CeEEEEeCC--CCc----EEEE--eccCC-CCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccc--eEEE
Confidence            689999887  654    5664  66677 78999999999999999999998773222   245789999995  9999


Q ss_pred             EEecCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhcc
Q 018404           87 KVVDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGI  136 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~  136 (356)
                      +++|++|++|++||+|++.                              |+|+||++++++. ++++ |+++++. ++|.
T Consensus        70 ~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~  146 (343)
T 2dq4_A           70 EAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAEN-AWVN-PKDLPFE-VAAI  146 (343)
T ss_dssp             EEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-EEEE-CTTSCHH-HHTT
T ss_pred             EEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHH-eEEC-CCCCCHH-HHHh
Confidence            9999999999999999972                              7999999999998 9999 9995554 3444


Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD  215 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  215 (356)
                      + .++.|||+++.+.+++ +|++|||+|+ |++|++++|+|+.+|+ +|++++++++++          +.++ ++ +++
T Consensus       147 ~-~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~----------~~~~-~l-a~~  211 (343)
T 2dq4_A          147 L-EPFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRL----------AFAR-PY-ADR  211 (343)
T ss_dssp             H-HHHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH----------GGGT-TT-CSE
T ss_pred             h-hHHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----------HHHH-Hh-HHh
Confidence            4 6788999999647889 9999999998 9999999999999999 999999999988          8888 88 999


Q ss_pred             EEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccch-HHHHhhcceee
Q 018404          216 AFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNL-MNVVYKRIRME  293 (356)
Q Consensus       216 vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~  293 (356)
                      ++|+++. ++.+.+++.+++++|+||||+|+ ..+..++++|+++|+++.+|....      ....+. ..++.+++++.
T Consensus       212 v~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~  284 (343)
T 2dq4_A          212 LVNPLEE-DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD------PIRFDLAGELVMRGITAF  284 (343)
T ss_dssp             EECTTTS-CHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CEEECHHHHTGGGTCEEE
T ss_pred             ccCcCcc-CHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CceeCcHHHHHhCceEEE
Confidence            9999876 88889988883399999999999 789999999999999999987432      123445 56788999998


Q ss_pred             ceeeecchhhHHHHHHHHHHHHHcCCC--ccceeeeeCCCcHHHHHHHHHcCCCcceEEEEec
Q 018404          294 GFVVFDYFPQYSRFLDAVLPYIREGKV--VYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       294 ~~~~~~~~~~~~~~l~~~~~~~~~g~l--~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      |+....    ..++++++++++++|++  ++.++++|+|+++++||+.+.+++. ||+|++++
T Consensus       285 g~~~~~----~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          285 GIAGRR----LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             ECCSCC----TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             EeecCC----CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            876541    15678999999999994  6778899999999999999988877 99999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=5e-48  Score=362.50  Aligned_cols=309  Identities=15%  Similarity=0.097  Sum_probs=255.9

Q ss_pred             cccccccEEEEeecccCCCCccceEEEEeeccccc-------CCCCCeEEEEEEEeecCHHhhhhhc-c--CCCCCCCCC
Q 018404            5 SEVLSNKQVILKNYVEGFPKETDMLVKASSISLKV-------EEGSNAILVKNLYLSCDPYMRARMS-F--NQDPDFSSF   74 (356)
Q Consensus         5 ~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~-------~~~~~evlV~v~~~~i~~~d~~~~~-~--~~~~~~~p~   74 (356)
                      +++++|||+++..+     .  .++++  ++|.|.       +++++||+|||.+++||++|++.+. .  ......+|.
T Consensus         4 ~~~~~mka~~~~~~-----~--~l~~~--~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~   74 (363)
T 3m6i_A            4 SASKTNIGVFTNPQ-----H--DLWIS--EASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDH   74 (363)
T ss_dssp             -CCSCCEEEEECTT-----C--CEEEE--ECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCE
T ss_pred             CCcccceeEEEeCC-----C--cEEEE--EecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCc
Confidence            47789999999753     2  35554  555551       3689999999999999999998876 2  222346689


Q ss_pred             CCCCcceecEEEEEecCCCCCCCCCCEEEE-------------------------------ccccceeEeecCCCcceee
Q 018404           75 TPGSPIEGFGVAKVVDSGHPEFKKGDLVWG-------------------------------TTGWEEYSLIKNPQGLFKI  123 (356)
Q Consensus        75 v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~l~~~  123 (356)
                      ++|||+  +|+|+++|++|++|++||+|++                               .|+|+||++++++. ++++
T Consensus        75 v~G~E~--~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~-~~~i  151 (363)
T 3m6i_A           75 VLGHES--AGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVW-CHKI  151 (363)
T ss_dssp             ECCCEE--EEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGG-EEEC
T ss_pred             ccCcce--EEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhh-EEEC
Confidence            999995  9999999999999999999985                               27999999999998 9999


Q ss_pred             cCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhH
Q 018404          124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQ  202 (356)
Q Consensus       124 ~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~  202 (356)
                       |+ +++. ++|.+ .++.|||+++ +.+++++|++|||+|+ |++|++++|+||.+|++ |++++++++++        
T Consensus       152 -P~-~s~~-~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~--------  217 (363)
T 3m6i_A          152 -GN-MSYE-NGAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRL--------  217 (363)
T ss_dssp             -TT-CCHH-HHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHH--------
T ss_pred             -CC-CCHH-HHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH--------
Confidence             88 7665 45555 6889999999 6689999999999996 99999999999999997 99999999998        


Q ss_pred             HHHHHHhhcCCCEEEecC----CcccHHHHHHHhCCC-CccEEEeCCCch-HHHHHHHhhccCCeEEEEccccccCCCCC
Q 018404          203 LVELLKNKFGFDDAFNYK----EENDLDAALKRCFPE-GIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMISQYNLSQP  276 (356)
Q Consensus       203 ~~~~~~~~~g~~~vv~~~----~~~~~~~~~~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  276 (356)
                        +.++ ++ ++.++++.    +..++.+.+++.+++ ++|++|||+|+. .+..++++|+++|+++.+|.....     
T Consensus       218 --~~a~-~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----  288 (363)
T 3m6i_A          218 --KFAK-EI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNE-----  288 (363)
T ss_dssp             --HHHH-HH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSC-----
T ss_pred             --HHHH-Hh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCC-----
Confidence              8888 88 65566654    112788899999987 999999999995 889999999999999999974332     


Q ss_pred             ccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCC--ccceeeeeCCCcHHHHHHHHHcC-CCcceEEEEe
Q 018404          277 EGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKV--VYVEDVADGLENAPAALVGLFSG-RNVGKQLVVV  353 (356)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l--~~~i~~~~~l~~~~~a~~~~~~~-~~~gk~vv~~  353 (356)
                       ...+...++.+++++.++...      .++++++++++++|++  ++.++++|+|+++++||+.+.++ ...+|+|+++
T Consensus       289 -~~~~~~~~~~~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~  361 (363)
T 3m6i_A          289 -IQIPFMRASVREVDLQFQYRY------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQS  361 (363)
T ss_dssp             -CCCCHHHHHHHTCEEEECCSC------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEEC
T ss_pred             -ccccHHHHHhcCcEEEEccCC------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEec
Confidence             224566788899998887643      3457889999999998  56788999999999999999987 6778999988


Q ss_pred             cC
Q 018404          354 SR  355 (356)
Q Consensus       354 ~~  355 (356)
                      ++
T Consensus       362 ~~  363 (363)
T 3m6i_A          362 LE  363 (363)
T ss_dssp             C-
T ss_pred             CC
Confidence            64

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=3.3e-49  Score=365.83  Aligned_cols=316  Identities=20%  Similarity=0.251  Sum_probs=256.7

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G   84 (356)
                      ||++|||++++++  |.+  ..++++  ++|.| +++++||+|||.++|||++|++.+.+. .....+|.++|||+  +|
T Consensus         1 m~~~mka~~~~~~--g~~--~~l~~~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~--~G   71 (330)
T 1tt7_A            1 MSTLFQALQAEKN--ADD--VSVHVK--TISTE-DLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDA--AG   71 (330)
T ss_dssp             -CCEEEEEEECCG--GGS--CCCEEE--EEESS-SSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEE--EE
T ss_pred             CCCcceEEEEecC--CCC--cceeEe--ecCCC-CCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceE--EE
Confidence            4668999999987  644  235564  55666 789999999999999999999987732 22235789999995  89


Q ss_pred             EEEEecCCCCCCCCCCEEEEc---------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHH--HcC
Q 018404           85 VAKVVDSGHPEFKKGDLVWGT---------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYE--ICA  153 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~--~~~  153 (356)
                      +|+++  ++++|++||+|++.         |+|+||++++++. ++++ |+++++. ++|+++++++|||.++..  ..+
T Consensus        72 ~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~  146 (330)
T 1tt7_A           72 TVVSS--NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW-LVPL-PQNLSLK-EAMVYGTAGFTAALSVHRLEQNG  146 (330)
T ss_dssp             EEEEC--SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGG-EEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEc--CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHH-eEEC-CCCCCHH-HHhhccchHHHHHHHHHHHHhcC
Confidence            99996  46889999999963         8999999999998 9999 9996665 688888899999988753  367


Q ss_pred             CCCCC-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHh
Q 018404          154 PKKGE-YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       154 ~~~g~-~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  232 (356)
                      +++|+ +|||+|++|++|++++|+|+.+|++|++++++++++          +.++ ++|+++++|+++. + .+.+++.
T Consensus       147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~----------~~~~-~lGa~~v~~~~~~-~-~~~~~~~  213 (330)
T 1tt7_A          147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA----------DYLK-QLGASEVISREDV-Y-DGTLKAL  213 (330)
T ss_dssp             CCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH----------HHHH-HHTCSEEEEHHHH-C-SSCCCSS
T ss_pred             cCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HcCCcEEEECCCc-h-HHHHHHh
Confidence            88997 999999999999999999999999999999999998          8888 8999999987532 2 1223344


Q ss_pred             CCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-hhhHHHHHHHH
Q 018404          233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAV  311 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~  311 (356)
                      +++++|++|||+|+..+..++++++++|+++.+|...+.     ....+...++.+++++.|+..... .....+.++++
T Consensus       214 ~~~~~d~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  288 (330)
T 1tt7_A          214 SKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERM  288 (330)
T ss_dssp             CCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHT
T ss_pred             hcCCccEEEECCcHHHHHHHHHhhcCCCEEEEEecCCCC-----ccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHH
Confidence            444899999999999999999999999999999975432     122344567789999988753322 22335677888


Q ss_pred             HHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          312 LPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       312 ~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      ++++++|++++.++++|+|+++++||+.+.+++..||+|+++
T Consensus       289 ~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          289 SSDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             TTTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            888899999999999999999999999999888889999863

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.3e-48  Score=357.43  Aligned_cols=313  Identities=19%  Similarity=0.252  Sum_probs=250.9

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V   86 (356)
                      .+|||++++++  |.+.  .+++  .++|.| +++++||+|||.++|||++|++.+.+. .....+|.++|||+  +|+|
T Consensus         2 ~~mka~~~~~~--g~~~--~l~~--~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~--~G~V   72 (328)
T 1xa0_A            2 SAFQAFVVNKT--ETEF--TAGV--QTISMD-DLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDL--AGVV   72 (328)
T ss_dssp             CEEEEEEEEEE--TTEE--EEEE--EEEEGG-GSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEE--EEEE
T ss_pred             CcceEEEEecC--CCcc--eeEE--EeccCC-CCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcce--EEEE
Confidence            47999999997  6542  3444  566666 789999999999999999999887632 22245789999995  8999


Q ss_pred             EEecCCCCCCCCCCEEEEc---------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHH--HcCCC
Q 018404           87 KVVDSGHPEFKKGDLVWGT---------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYE--ICAPK  155 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~--~~~~~  155 (356)
                      ++.  ++++|++||+|++.         |+|+||++++++. ++++ |+++++. ++|++++++.|||.++..  ..+++
T Consensus        73 ~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~~  147 (328)
T 1xa0_A           73 VSS--QHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW-LVPL-PKGLTLK-EAMAIGTAGFTAALSIHRLEEHGLT  147 (328)
T ss_dssp             EEC--CSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGG-CEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             Eec--CCCCCCCCCEEEEccccCCCCCCccceeEEEechHH-eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHHhhcCCC
Confidence            995  57889999999963         8999999999998 9999 9996655 688888899999988753  36789


Q ss_pred             CCC-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          156 KGE-YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~-~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      +|+ +|||+|++|++|++++|+|+.+|++|++++++++++          +.++ ++|+++++|+.+. + .+.+++.++
T Consensus       148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~----------~~~~-~lGa~~~i~~~~~-~-~~~~~~~~~  214 (328)
T 1xa0_A          148 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH----------DYLR-VLGAKEVLAREDV-M-AERIRPLDK  214 (328)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH----------HHHH-HTTCSEEEECC-----------CCS
T ss_pred             CCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHH-HcCCcEEEecCCc-H-HHHHHHhcC
Confidence            997 999999999999999999999999999999999998          8898 8999999998764 3 344555555


Q ss_pred             CCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHH
Q 018404          235 EGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLP  313 (356)
Q Consensus       235 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~  313 (356)
                      +++|++|||+|+..+..++++++++|+++.+|...+.+     ...+...++.+++++.|+..... .....+.++.+++
T Consensus       215 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~-----~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  289 (328)
T 1xa0_A          215 QRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAE-----VPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAG  289 (328)
T ss_dssp             CCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSC-----CCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHT
T ss_pred             CcccEEEECCcHHHHHHHHHhhccCCEEEEEeecCCCC-----CCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999754321     12334567789999988743222 2233566788888


Q ss_pred             HHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEec
Q 018404          314 YIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVS  354 (356)
Q Consensus       314 ~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~  354 (356)
                      ++++| +++ +.++|+|+++++||+.+.+++..||+|++++
T Consensus       290 ~~~~g-l~~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          290 DLKPD-LER-IAQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             TTCCC-HHH-HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             HHHcC-Cce-eeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            88888 776 4689999999999999999888999999863

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=4.6e-48  Score=364.17  Aligned_cols=322  Identities=20%  Similarity=0.268  Sum_probs=254.7

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccC-CCCCeEEEEEEEeecCHHhhhhhccCC-------------C--C
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVE-EGSNAILVKNLYLSCDPYMRARMSFNQ-------------D--P   69 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~-~~~~evlV~v~~~~i~~~d~~~~~~~~-------------~--~   69 (356)
                      ++++|||+++.++  |.|.  .+++. .++|.| . ++++||+|||.++|||++|++.+.+..             .  .
T Consensus        18 ~~~~mka~~~~~~--g~~~--~l~~~-~~~p~P-~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~   91 (375)
T 2vn8_A           18 LYFQSMAWVIDKY--GKNE--VLRFT-QNMMMP-IIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKG   91 (375)
T ss_dssp             CCCCEEEEEBSSC--CSGG--GCEEE-EEECCC-CCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTT
T ss_pred             cCccceeEEeccC--CCcc--ceEEe-ccccCC-CCCCCCEEEEEEEEEEcCHHHHHHhccCcccccccccccccccccc
Confidence            4578999999988  7663  45551 355666 5 489999999999999999999876321             1  1


Q ss_pred             CCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc------cccceeEeecCCCcceeecCCCCCccchhcccCcchHH
Q 018404           70 DFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMT  143 (356)
Q Consensus        70 ~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~t  143 (356)
                      ..+|.++|||+  +|+|+++|++|++|++||+|++.      |+|+||++++++. ++++ |+++++. ++|+++++++|
T Consensus        92 ~~~P~v~G~E~--~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~ls~~-~Aa~l~~~~~t  166 (375)
T 2vn8_A           92 EEFPLTLGRDV--SGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNE-VSHK-PKSLTHT-QAASLPYVALT  166 (375)
T ss_dssp             TTCSBCCCCEE--EEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGG-EEEC-CTTSCHH-HHTTSHHHHHH
T ss_pred             ccCCcccceee--eEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHH-eeeC-CCCCCHH-HHhhhHHHHHH
Confidence            23789999995  99999999999999999999983      8999999999999 9999 9996665 68888889999


Q ss_pred             HHHHHHHHcC----CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          144 AWAGFYEICA----PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       144 A~~~l~~~~~----~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      ||+++.+.++    +++|++|+|+||+|++|++++|+|+.+|++|++++ +++++          +.++ ++|++.++|+
T Consensus       167 A~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~----------~~~~-~lGa~~v~~~  234 (375)
T 2vn8_A          167 AWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDAS----------ELVR-KLGADDVIDY  234 (375)
T ss_dssp             HHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH----------HHHH-HTTCSEEEET
T ss_pred             HHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHH----------HHHH-HcCCCEEEEC
Confidence            9999977788    89999999999999999999999999999999998 56777          8888 9999999999


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCch--HHHHHHHhhccCCeEEEEccccccCCCCCccccc----hHHHHhhcc-ee
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGGK--MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHN----LMNVVYKRI-RM  292 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~-~~  292 (356)
                      ++. ++.+.+.+.  +++|++|||+|+.  .+..++++++++|+++.+|...............    ...++.+++ ++
T Consensus       235 ~~~-~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (375)
T 2vn8_A          235 KSG-SVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHF  311 (375)
T ss_dssp             TSS-CHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred             Cch-HHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhcccccccc
Confidence            876 777777653  3799999999986  4488899999999999998643210000000000    012333333 22


Q ss_pred             -eceeee-cchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          293 -EGFVVF-DYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       293 -~~~~~~-~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                       .+.... .+.....+.++++++++++|++++.++++|+|+++++||+.+.+++..||+|+++
T Consensus       312 ~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          312 WKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HTTCEEEECCCCCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             ccCcceEEEEeCCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence             232221 1111125678999999999999999999999999999999999988889999975

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=8.3e-47  Score=354.28  Aligned_cols=306  Identities=15%  Similarity=0.146  Sum_probs=255.2

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      +||+..+..+  +.+.  .+.+  .++|.| +++++||+|||.++|||++|++.+.+......+|.++|||+  +|+|++
T Consensus        14 ~mk~~~~~~~--~~~~--~l~~--~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~--~G~V~~   84 (366)
T 1yqd_A           14 PVKAFGWAAR--DQSG--HLSP--FNFSRR-ATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEI--VGEVTE   84 (366)
T ss_dssp             SEEEEEEEEC--STTC--CEEE--EEEEEC-CCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCE--EEEEEE
T ss_pred             CeeEEEEEEc--CCCC--CcEE--EEccCC-CCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccce--EEEEEE
Confidence            4666666655  4443  3555  456666 78999999999999999999998774333345789999996  999999


Q ss_pred             ecCCCCCCCCCCEEEE--------------------------------------ccccceeEeecCCCcceeecCCCCCc
Q 018404           89 VDSGHPEFKKGDLVWG--------------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPL  130 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~  130 (356)
                      +|++|++|++||+|++                                      .|+|+||++++++. ++++ |+++++
T Consensus        85 vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~ls~  162 (366)
T 1yqd_A           85 VGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERY-IIRF-PDNMPL  162 (366)
T ss_dssp             ECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGG-CEEC-CTTSCT
T ss_pred             ECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhh-EEEC-CCCCCH
Confidence            9999999999999973                                      27899999999998 9999 999666


Q ss_pred             cchhcccCcchHHHHHHHHHHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh
Q 018404          131 SYYTGILGMPGMTAWAGFYEICAPK-KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN  209 (356)
Q Consensus       131 ~~~~a~l~~~~~tA~~~l~~~~~~~-~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~  209 (356)
                      . ++|++++++.|||+++.. .+++ +|++|||+| +|++|++++|+|+.+|++|++++++++++          +.+++
T Consensus       163 ~-~aa~l~~~~~ta~~al~~-~~~~~~g~~VlV~G-aG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~----------~~~~~  229 (366)
T 1yqd_A          163 D-GGAPLLCAGITVYSPLKY-FGLDEPGKHIGIVG-LGGLGHVAVKFAKAFGSKVTVISTSPSKK----------EEALK  229 (366)
T ss_dssp             T-TTGGGGTHHHHHHHHHHH-TTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGH----------HHHHH
T ss_pred             H-HhhhhhhhHHHHHHHHHh-cCcCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHH
Confidence            5 588899999999999965 5788 999999999 59999999999999999999999998887          77655


Q ss_pred             hcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhh
Q 018404          210 KFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYK  288 (356)
Q Consensus       210 ~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  288 (356)
                      ++|++.++|+.+.    +.+++.++ ++|+||||+|+ ..+..++++|+++|+++.+|....      ....+...++.+
T Consensus       230 ~lGa~~v~~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~  298 (366)
T 1yqd_A          230 NFGADSFLVSRDQ----EQMQAAAG-TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK------PLELPAFSLIAG  298 (366)
T ss_dssp             TSCCSEEEETTCH----HHHHHTTT-CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSS------CEEECHHHHHTT
T ss_pred             hcCCceEEeccCH----HHHHHhhC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCC------CCCcCHHHHHhC
Confidence            8999999998763    24555553 79999999998 478999999999999999997432      122455677889


Q ss_pred             cceeeceeeecchhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          289 RIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      ++++.++....     .++++++++++++|++++.+ ++|+|+++++||+.+.+++..||+|+.+++
T Consensus       299 ~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~  359 (366)
T 1yqd_A          299 RKIVAGSGIGG-----MKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVGN  359 (366)
T ss_dssp             TCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred             CcEEEEecCCC-----HHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence            99998876654     56789999999999999877 589999999999999999888999998753

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=5.3e-47  Score=359.58  Aligned_cols=310  Identities=18%  Similarity=0.176  Sum_probs=257.9

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCC-CC-----CeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCccee
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEE-GS-----NAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEG   82 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~-~~-----~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~   82 (356)
                      +|||++++++  +     .+++  .++|.| ++ ++     +||+|||.++|||++|++.+.+.. ...+|.++|||+  
T Consensus         2 ~MkA~~~~~~--~-----~l~~--~~~p~P-~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~-~~~~p~v~GhE~--   68 (398)
T 2dph_A            2 GNKSVVYHGT--R-----DLRV--ETVPYP-KLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF-IVPKGHVLGHEI--   68 (398)
T ss_dssp             CEEEEEEEET--T-----EEEE--EEECCC-CSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS-CCCTTCBCCCCE--
T ss_pred             ccEEEEEEcC--C-----CEEE--EEccCC-CCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC-CCCCCcccCCce--
Confidence            5899999875  2     2455  466666 55 57     999999999999999999887432 345789999995  


Q ss_pred             cEEEEEecCCCCCCCCCCEEEE-----------------------------------------ccccceeEeecCC--Cc
Q 018404           83 FGVAKVVDSGHPEFKKGDLVWG-----------------------------------------TTGWEEYSLIKNP--QG  119 (356)
Q Consensus        83 ~G~V~~vG~~v~~~~~Gd~V~~-----------------------------------------~g~~~~~~~v~~~--~~  119 (356)
                      +|+|+++|++|++|++||+|++                                         .|+|+||++++++  . 
T Consensus        69 ~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~-  147 (398)
T 2dph_A           69 TGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYM-  147 (398)
T ss_dssp             EEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHH-
T ss_pred             EEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCe-
Confidence            9999999999999999999985                                         2789999999986  6 


Q ss_pred             ceeecCCCCCccch----hcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchh
Q 018404          120 LFKIHHTDVPLSYY----TGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKV  194 (356)
Q Consensus       120 l~~~~p~~~~~~~~----~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~  194 (356)
                      ++++ |+++++. +    +|+++++++|||+++ +.+++++|++|||+| +|++|++++|+|+.+|+ +|++++++++++
T Consensus       148 ~~~i-P~~~~~~-~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  223 (398)
T 2dph_A          148 LLKF-GDKEQAM-EKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAG-AGPVGRCAAAGARLLGAACVIVGDQNPERL  223 (398)
T ss_dssp             CEEC-SSHHHHH-HTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred             EEEC-CCCCChh-hhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence            9999 9984444 4    688999999999999 578999999999999 59999999999999999 999999999998


Q ss_pred             ccccchhHHHHHHHhhcCCCEEEecCCcccH-HHHHHHhCCC-CccEEEeCCCch---------------HHHHHHHhhc
Q 018404          195 WLIPMQSQLVELLKNKFGFDDAFNYKEENDL-DAALKRCFPE-GIDIYFEHVGGK---------------MLDAVLLNMR  257 (356)
Q Consensus       195 ~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~-~~~~~~~~~~-~~d~vid~~g~~---------------~~~~~~~~l~  257 (356)
                                +.++ ++|++ ++|+.+. ++ .+.+++.+++ ++|+||||+|+.               .+..++++|+
T Consensus       224 ----------~~a~-~lGa~-~i~~~~~-~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~  290 (398)
T 2dph_A          224 ----------KLLS-DAGFE-TIDLRNS-APLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVR  290 (398)
T ss_dssp             ----------HHHH-TTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEE
T ss_pred             ----------HHHH-HcCCc-EEcCCCc-chHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHh
Confidence                      8998 99995 8898775 65 8889888887 899999999974               6899999999


Q ss_pred             cCCeEEEEcccc-ccCCC------CCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc--c--ceee
Q 018404          258 LHGRIAACGMIS-QYNLS------QPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV--Y--VEDV  326 (356)
Q Consensus       258 ~~G~~v~~g~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~--~--~i~~  326 (356)
                      ++|+++.+|... +.+..      ......+...++.+++++.++....     .++++++++++++|+++  +  .+++
T Consensus       291 ~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~~~i~~  365 (398)
T 2dph_A          291 AGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV-----TNYNRHLTEAILWDQMPYLSKVMNIE  365 (398)
T ss_dssp             EEEEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG-----GGTHHHHHHHHHTTCCHHHHHHHCEE
T ss_pred             cCCEEEEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccCc-----HHHHHHHHHHHHcCCCCccchhhEEE
Confidence            999999999752 11000      0112345566788999988765433     45688999999999998  6  5789


Q ss_pred             eeCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          327 ADGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       327 ~~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      +|+|+++++||+.+.+++. ||+|+.++.
T Consensus       366 ~~~l~~~~~A~~~~~~~~~-gKvvv~~~~  393 (398)
T 2dph_A          366 VITLDQAPDGYAKFDKGSP-AKFVIDPHG  393 (398)
T ss_dssp             EECSTTHHHHHHHHHTTCS-CEEEECTTS
T ss_pred             EEcHHHHHHHHHHHhcCCc-eEEEEecCc
Confidence            9999999999999998887 999998753

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2e-46  Score=355.77  Aligned_cols=311  Identities=18%  Similarity=0.168  Sum_probs=255.7

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCC-CCe------EEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcce
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEG-SNA------ILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIE   81 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~-~~e------vlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~   81 (356)
                      +|||+++.++  +     .+++  .++|.| +++ ++|      |+|||.+++||++|++.+.+.. ...+|.++|||+ 
T Consensus         2 ~Mka~~~~~~--~-----~l~~--~~~p~P-~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~-~~~~p~v~GhE~-   69 (398)
T 1kol_A            2 GNRGVVYLGS--G-----KVEV--QKIDYP-KMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT-TAQVGLVLGHEI-   69 (398)
T ss_dssp             CEEEEEEEET--T-----EEEE--EEECCC-CSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS-CCCTTCBCCCCE-
T ss_pred             ccEEEEEecC--C-----ceEE--EEecCC-CCCCCCcccccceEEEEEEEEeechhhHHHHcCCC-CCCCCcccCccc-
Confidence            6899999875  2     2455  466666 675 888      9999999999999999887432 234689999995 


Q ss_pred             ecEEEEEecCCCCCCCCCCEEEE----------------------------------------ccccceeEeecCC--Cc
Q 018404           82 GFGVAKVVDSGHPEFKKGDLVWG----------------------------------------TTGWEEYSLIKNP--QG  119 (356)
Q Consensus        82 ~~G~V~~vG~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~--~~  119 (356)
                       +|+|+++|++|++|++||+|++                                        .|+|+||+++++.  . 
T Consensus        70 -~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~-  147 (398)
T 1kol_A           70 -TGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFN-  147 (398)
T ss_dssp             -EEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHH-
T ss_pred             -EEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCe-
Confidence             9999999999999999999973                                        1789999999986  7 


Q ss_pred             ceeecCCCCCccch----hcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchh
Q 018404          120 LFKIHHTDVPLSYY----TGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKV  194 (356)
Q Consensus       120 l~~~~p~~~~~~~~----~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~  194 (356)
                      ++++ |++++.. +    +|++++++.|||+++. .+++++|++|||+| +|++|++++|+||.+|+ +|++++++++++
T Consensus       148 ~~~~-P~~~~~~-~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~  223 (398)
T 1kol_A          148 LLKL-PDRDKAM-EKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARL  223 (398)
T ss_dssp             CEEC-SCHHHHH-HTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             EEEC-CCCcchh-hhcccccccccHHHHHHHHHH-HcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence            9999 9984333 3    5789999999999996 68999999999999 69999999999999999 899999999998


Q ss_pred             ccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCch----------------HHHHHHHhhc
Q 018404          195 WLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGK----------------MLDAVLLNMR  257 (356)
Q Consensus       195 ~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~----------------~~~~~~~~l~  257 (356)
                                +.++ ++|++ ++|+.+.+++.+.+++.+++ ++|+||||+|+.                .+..++++|+
T Consensus       224 ----------~~a~-~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~  291 (398)
T 1kol_A          224 ----------AHAK-AQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTR  291 (398)
T ss_dssp             ----------HHHH-HTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEE
T ss_pred             ----------HHHH-HcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHh
Confidence                      8998 99997 78887652488899998887 999999999985                6899999999


Q ss_pred             cCCeEEEEccc-cccCCCC------CccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc---cceeee
Q 018404          258 LHGRIAACGMI-SQYNLSQ------PEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV---YVEDVA  327 (356)
Q Consensus       258 ~~G~~v~~g~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~---~~i~~~  327 (356)
                      ++|+++.+|.. .+.+...      .....+...++.+++++.+....     ..++++++++++.+|+++   +.++++
T Consensus       292 ~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~l~~~g~l~~~~~~i~~~  366 (398)
T 1kol_A          292 VAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP-----VMKYNRALMQAIMWDRINIAEVVGVQV  366 (398)
T ss_dssp             EEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC-----HHHHHHHHHHHHHTTSCCHHHHHTEEE
T ss_pred             cCCEEEEeccccCCcccccccccccccccccHHHHhhcccEEEecccC-----hHHHHHHHHHHHHcCCCCCccceeEEE
Confidence            99999999975 2211100      01223455677888888765332     256788999999999998   467899


Q ss_pred             eCCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          328 DGLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       328 ~~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      |+|+++++||+.+.+++. ||+|++++.
T Consensus       367 ~~l~~~~~A~~~~~~~~~-gKvvi~~~~  393 (398)
T 1kol_A          367 ISLDDAPRGYGEFDAGVP-KKFVIDPHK  393 (398)
T ss_dssp             ECGGGHHHHHHHHHHTCS-CEEEECTTC
T ss_pred             EcHHHHHHHHHHHhCCCc-eEEEEEeCC
Confidence            999999999999998887 999998754

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1.3e-47  Score=358.81  Aligned_cols=298  Identities=15%  Similarity=0.097  Sum_probs=253.6

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCC---CCCCCCcceecEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFS---SFTPGSPIEGFGVA   86 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~---p~v~G~e~~~~G~V   86 (356)
                      |||++++++  |.+    +++  .++|.| +++++||+|||.++|||++|++.+.+......+   |.++|||+  +| |
T Consensus         1 MkA~~~~~~--~~~----l~~--~~~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~--~G-V   68 (357)
T 2b5w_A            1 MKAIAVKRG--EDR----PVV--IEKPRP-EPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEA--VG-V   68 (357)
T ss_dssp             CEEEEEETT--CSS----CEE--EECCCC-CCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEE--EE-E
T ss_pred             CeEEEEeCC--CCc----eEE--EECCCC-CCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCcee--EE-E
Confidence            789999887  553    456  466677 789999999999999999999988743222345   89999995  99 9


Q ss_pred             EEecCCCCCCCCCCEEEEc-----------------------------------cccceeEeecCCCcceeecCCCCCcc
Q 018404           87 KVVDSGHPEFKKGDLVWGT-----------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLS  131 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~-----------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~  131 (356)
                      +++|++ ++|++||+|++.                                   |+|+||++++++. ++++ |+++  +
T Consensus        69 ~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~~--~  143 (357)
T 2b5w_A           69 VVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKY-LVRI-PRSQ--A  143 (357)
T ss_dssp             EEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGG-EEEC-CGGG--S
T ss_pred             EEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHH-eEEC-CCCc--c
Confidence            999999 999999999863                                   7899999999999 9999 9994  4


Q ss_pred             chhcccCcchHHHHHHHHHHcCCCCC------CEEEEecCCchHHHHH-HHHH-HHcCCE-EEEEeCCcc---hhccccc
Q 018404          132 YYTGILGMPGMTAWAGFYEICAPKKG------EYIYVSAASGAVGQLV-GQFA-KLMGCY-VVGSAGSRE---KVWLIPM  199 (356)
Q Consensus       132 ~~~a~l~~~~~tA~~~l~~~~~~~~g------~~VlI~ga~g~vG~~a-i~la-~~~g~~-Vi~~~~~~~---~~~~~~~  199 (356)
                       ++|+++.+++|||+++ +.+++++|      ++|||+|+ |++|+++ +|+| +.+|++ |++++++++   ++     
T Consensus       144 -~~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~-----  215 (357)
T 2b5w_A          144 -ELGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI-----  215 (357)
T ss_dssp             -TTGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH-----
T ss_pred             -hhhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH-----
Confidence             5677889999999999 56789999      99999997 9999999 9999 999996 999999998   88     


Q ss_pred             hhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCcc
Q 018404          200 QSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEG  278 (356)
Q Consensus       200 ~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  278 (356)
                           +.++ ++|++++ |+++. ++.+ +++. .+++|+||||+|+ ..+..++++|+++|+++.+|.....     ..
T Consensus       216 -----~~~~-~lGa~~v-~~~~~-~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~  280 (357)
T 2b5w_A          216 -----DIIE-ELDATYV-DSRQT-PVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDW-----AF  280 (357)
T ss_dssp             -----HHHH-HTTCEEE-ETTTS-CGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCC-----CC
T ss_pred             -----HHHH-HcCCccc-CCCcc-CHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCC-----Cc
Confidence                 8898 9999988 98876 7777 7777 5589999999999 4889999999999999999975421     11


Q ss_pred             ccchHHH----HhhcceeeceeeecchhhHHHHHHHHHHHHHcC--C-CccceeeeeCCCcHHHHHHHHHcCCCcceEEE
Q 018404          279 VHNLMNV----VYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREG--K-VVYVEDVADGLENAPAALVGLFSGRNVGKQLV  351 (356)
Q Consensus       279 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g--~-l~~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv  351 (356)
                      ..+...+    +.+++++.++....     .++++++++++++|  + +++.++++|+|+++++||+.+   ...||+|+
T Consensus       281 ~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi  352 (357)
T 2b5w_A          281 EVDAGAFHREMVLHNKALVGSVNSH-----VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAI  352 (357)
T ss_dssp             CCCHHHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEE
T ss_pred             eecHHHHhHHHHhCCeEEEEeccCC-----HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEE
Confidence            2344455    78999998876654     67899999999999  8 688899999999999999988   35789999


Q ss_pred             EecC
Q 018404          352 VVSR  355 (356)
Q Consensus       352 ~~~~  355 (356)
                      ++++
T Consensus       353 ~~~~  356 (357)
T 2b5w_A          353 EFST  356 (357)
T ss_dssp             ECCC
T ss_pred             EecC
Confidence            9864

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=8.6e-48  Score=362.52  Aligned_cols=314  Identities=16%  Similarity=0.147  Sum_probs=258.3

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC------------------
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ------------------   67 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~------------------   67 (356)
                      ...+|||++...   |..   .+++  .++|.| +++++||+|||.+++||++|++.+.+..                  
T Consensus         4 ~~~~mka~v~~~---~~~---~l~~--~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~   74 (379)
T 3iup_A            4 SALQLRSRIKSS---GEL---ELSL--DSIDTP-HPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTA   74 (379)
T ss_dssp             EEEEEEEEECTT---SEE---EEEE--EEEECC-CCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEE
T ss_pred             chhhHHHHHhcC---CCC---ceEE--EeccCC-CCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccc
Confidence            356789988754   222   2444  566666 7899999999999999999998876321                  


Q ss_pred             -----------CCCCCCCCCCCcceecEEEEEecCCC-CCCCCCCEEEEc--cccceeEeecCCCcceeecCCCCCccch
Q 018404           68 -----------DPDFSSFTPGSPIEGFGVAKVVDSGH-PEFKKGDLVWGT--TGWEEYSLIKNPQGLFKIHHTDVPLSYY  133 (356)
Q Consensus        68 -----------~~~~~p~v~G~e~~~~G~V~~vG~~v-~~~~~Gd~V~~~--g~~~~~~~v~~~~~l~~~~p~~~~~~~~  133 (356)
                                 ....+|.++|||+  +|+|+++|++| ++|++||+|++.  |+|+||++++++. ++++ |+++++. +
T Consensus        75 ~~p~~~~~~~~~~~~~p~i~G~e~--~G~V~~vG~~v~~~~~vGdrV~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~  149 (379)
T 3iup_A           75 RVPEGAMRSMAGRLDASMPVGNEG--AGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQ-CLVL-PEGATPA-D  149 (379)
T ss_dssp             ECCHHHHHHHGGGTTEEEECCSCE--EEEEEEECSSHHHHTTTTCEEEECCSCCSBSEEEEEGGG-EEEC-CTTCCHH-H
T ss_pred             cCccccccccccccCCCccceeee--EEEEEEeCCCcccCCCCCCEEEecCCCcceeEEEeCHHH-eEEC-CCCCCHH-H
Confidence                       0234689999995  99999999999 889999999998  8999999999998 9999 9996665 6


Q ss_pred             hcccCcchHHHHHHHHHHcCCCCCCEEEEec-CCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          134 TGILGMPGMTAWAGFYEICAPKKGEYIYVSA-ASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       134 ~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-a~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      +|++++.++|||+++... . ++|++|||+| |+|++|++++|+|+.+|++|++++++++++          +.++ ++|
T Consensus       150 aa~l~~~~~ta~~~~~~~-~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~----------~~~~-~lG  216 (379)
T 3iup_A          150 GASSFVNPLTALGMVETM-R-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA----------DLLK-AQG  216 (379)
T ss_dssp             HTTSSHHHHHHHHHHHHH-H-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHH----------HHHH-HTT
T ss_pred             HHhhhhhHHHHHHHHHHh-c-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHH-hCC
Confidence            888999999999888654 4 8999999996 899999999999999999999999999998          9999 999


Q ss_pred             CCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhc-----cC-----------CeEEEEccccccCCC
Q 018404          213 FDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMR-----LH-----------GRIAACGMISQYNLS  274 (356)
Q Consensus       213 ~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~  274 (356)
                      +++++|+++. ++.+.+++.+++ ++|++|||+|+ ..+..++++|+     ++           |+++.+|.....   
T Consensus       217 a~~~~~~~~~-~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~---  292 (379)
T 3iup_A          217 AVHVCNAASP-TFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS---  292 (379)
T ss_dssp             CSCEEETTST-THHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE---
T ss_pred             CcEEEeCCCh-HHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC---
Confidence            9999999887 899999999887 99999999998 57788888885     44           566666553321   


Q ss_pred             CCccccchHHHHhhcceeeceeeecc-----hhhHHHHHHHHHHHHHcCCCccceeeeeCCCcH--HHHHHHHHcCCCcc
Q 018404          275 QPEGVHNLMNVVYKRIRMEGFVVFDY-----FPQYSRFLDAVLPYIREGKVVYVEDVADGLENA--PAALVGLFSGRNVG  347 (356)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~--~~a~~~~~~~~~~g  347 (356)
                          +......+.+++++.|++...+     ++...+.++++++++.+ .+++.++++|+|+++  ++||+.+.+++..|
T Consensus       293 ----~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~g  367 (379)
T 3iup_A          293 ----PTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGE  367 (379)
T ss_dssp             ----EEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTC
T ss_pred             ----ccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCc
Confidence                1122234567888888877654     23345667788888888 588999999999999  99999999999999


Q ss_pred             eEEEEecC
Q 018404          348 KQLVVVSR  355 (356)
Q Consensus       348 k~vv~~~~  355 (356)
                      |+|+++++
T Consensus       368 KvVv~~~~  375 (379)
T 3iup_A          368 KYLINPNK  375 (379)
T ss_dssp             CEEEETTT
T ss_pred             eEEEeCCC
Confidence            99999875

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=3.3e-46  Score=341.43  Aligned_cols=294  Identities=20%  Similarity=0.232  Sum_probs=245.9

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC-CCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN-QDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~-~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||++++++  |.|.    .++  ++|.| +++++||+|||.++|||++|++.+.+. .....+|.++|||+  +|+|+ 
T Consensus         1 Mka~~~~~~--g~~~----~l~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~--~G~V~-   68 (302)
T 1iz0_A            1 MKAWVLKRL--GGPL----ELV--DLPEP-EAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEV--VGVVE-   68 (302)
T ss_dssp             CEEEEECST--TSCE----EEE--ECCCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEE--EEEET-
T ss_pred             CeEEEEcCC--CCch----heE--ECCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceE--EEEEE-
Confidence            689999887  7773    454  67777 789999999999999999999987742 22235789999995  88886 


Q ss_pred             ecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecC
Q 018404           89 VDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAA  165 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga  165 (356)
                                ||+|++.   |+|+||++++++. ++++ |+++++. ++|+++++++|||+++.+.+ +++|++|+|+|+
T Consensus        69 ----------GdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga  134 (302)
T 1iz0_A           69 ----------GRRYAALVPQGGLAERVAVPKGA-LLPL-PEGLSPE-EAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAA  134 (302)
T ss_dssp             ----------TEEEEEECSSCCSBSEEEEEGGG-CEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHTT-CCTTCEEEESST
T ss_pred             ----------CcEEEEecCCcceeeEEEEcHHH-cEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECC
Confidence                      9999987   8999999999998 9999 9996554 58899999999999998777 999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCC-cccHHHHHHHhCCCCccEEEeCC
Q 018404          166 SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE-ENDLDAALKRCFPEGIDIYFEHV  244 (356)
Q Consensus       166 ~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~~~~~~~~d~vid~~  244 (356)
                      +|++|++++|+++.+|++|++++++++++          +.++ ++|+++++|+++ . ++.+.+     +++|++|| +
T Consensus       135 ~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~----------~~~~-~~ga~~~~~~~~~~-~~~~~~-----~~~d~vid-~  196 (302)
T 1iz0_A          135 AGALGTAAVQVARAMGLRVLAAASRPEKL----------ALPL-ALGAEEAATYAEVP-ERAKAW-----GGLDLVLE-V  196 (302)
T ss_dssp             TBHHHHHHHHHHHHTTCEEEEEESSGGGS----------HHHH-HTTCSEEEEGGGHH-HHHHHT-----TSEEEEEE-C
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-hcCCCEEEECCcch-hHHHHh-----cCceEEEE-C
Confidence            99999999999999999999999999998          8888 899999998875 4 555444     47999999 9


Q ss_pred             CchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHHHH---HHHcCCCc
Q 018404          245 GGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLP---YIREGKVV  321 (356)
Q Consensus       245 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~g~l~  321 (356)
                      |+..+..++++++++|+++.+|......     ...+...++.+++++.++....+ ....++++++++   ++.+|+++
T Consensus       197 g~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~  270 (302)
T 1iz0_A          197 RGKEVEESLGLLAHGGRLVYIGAAEGEV-----APIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGFLLPRLGRELR  270 (302)
T ss_dssp             SCTTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH-TTCHHHHHHHHHHHGGGBTTTBC
T ss_pred             CHHHHHHHHHhhccCCEEEEEeCCCCCC-----CCcCHHHHHhCCCeEEEEeccch-hhhHHHHHHHHhhhHHHHcCCcc
Confidence            9999999999999999999999754321     12344567889999988765432 223677889999   99999999


Q ss_pred             cceeeeeCCCcHHHHHHHHHcCCCcceEEEEe
Q 018404          322 YVEDVADGLENAPAALVGLFSGRNVGKQLVVV  353 (356)
Q Consensus       322 ~~i~~~~~l~~~~~a~~~~~~~~~~gk~vv~~  353 (356)
                      +.++++|+++++++|++.+.+++..||+|+.+
T Consensus       271 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          271 PVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             CCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             cccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999999999999999888889999864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=2.8e-46  Score=380.52  Aligned_cols=309  Identities=16%  Similarity=0.169  Sum_probs=261.6

Q ss_pred             EEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEecCC
Q 018404           13 VILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSG   92 (356)
Q Consensus        13 ~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~vG~~   92 (356)
                      +.+..+  |.++  .|.++..+.|.| +++++||+|||.++|||++|++...+.   ...|.++|||+  +|+|+++|++
T Consensus       213 l~~~~~--G~~~--~L~~~~~~~p~~-~~~~~eVlV~V~a~gin~~D~~~~~G~---~~~~~~lG~E~--aG~V~~vG~~  282 (795)
T 3slk_A          213 LEATRP--GSLD--GLALVDEPTATA-PLGDGEVRIAMRAAGVNFRDALIALGM---YPGVASLGSEG--AGVVVETGPG  282 (795)
T ss_dssp             EEESST--TSST--TEEECCCHHHHS-CCCSSEEEEEEEEEEECHHHHHHTTTC---CSSCCCSCCCE--EEEEEEECSS
T ss_pred             EecCCC--CCcc--ceEEEeCCccCC-CCCCCEEEEEEEEEccCHHHHHHHcCC---CCCCcccccee--EEEEEEeCCC
Confidence            344454  7774  677765555556 789999999999999999999887632   23456899995  9999999999


Q ss_pred             CCCCCCCCEEEEc--cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHH
Q 018404           93 HPEFKKGDLVWGT--TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVG  170 (356)
Q Consensus        93 v~~~~~Gd~V~~~--g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG  170 (356)
                      |++|++||+|+++  |+|+||+++++.. ++++ |+++++. ++|++++.++|||+++.+.+++++|++|||+||+|++|
T Consensus       283 V~~~~vGDrV~~~~~G~~ae~~~v~~~~-~~~i-P~~ls~~-~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG  359 (795)
T 3slk_A          283 VTGLAPGDRVMGMIPKAFGPLAVADHRM-VTRI-PAGWSFA-RAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVG  359 (795)
T ss_dssp             CCSSCTTCEEEECCSSCSSSEEEEETTS-EEEC-CTTCCHH-HHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHH
T ss_pred             CCcCCCCCEEEEEecCCCcCEEEeehHH-EEEC-CCCCCHH-HHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHH
Confidence            9999999999987  8999999999999 9999 9996555 68889999999999998889999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHH
Q 018404          171 QLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKML  249 (356)
Q Consensus       171 ~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~  249 (356)
                      ++++|+||.+|++||++++++ +.          +.+  ++|+++++|+++. ++.+.+++.|++ |+|+||||+|++.+
T Consensus       360 ~~aiqlAk~~Ga~V~~t~~~~-k~----------~~l--~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~gg~~~  425 (795)
T 3slk_A          360 MAAIQLARHLGAEVYATASED-KW----------QAV--ELSREHLASSRTC-DFEQQFLGATGGRGVDVVLNSLAGEFA  425 (795)
T ss_dssp             HHHHHHHHHTTCCEEEECCGG-GG----------GGS--CSCGGGEECSSSS-THHHHHHHHSCSSCCSEEEECCCTTTT
T ss_pred             HHHHHHHHHcCCEEEEEeChH-Hh----------hhh--hcChhheeecCCh-hHHHHHHHHcCCCCeEEEEECCCcHHH
Confidence            999999999999999999766 54          433  4899999999887 999999999998 99999999999999


Q ss_pred             HHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecc-hhhHHHHHHHHHHHHHcCCCccceeeee
Q 018404          250 DAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY-FPQYSRFLDAVLPYIREGKVVYVEDVAD  328 (356)
Q Consensus       250 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~g~l~~~i~~~~  328 (356)
                      ..++++|+++|+++.+|.....       .........+++++.++.+... +....+.++++++++++|++++.+.++|
T Consensus       426 ~~~l~~l~~~Gr~v~iG~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~  498 (795)
T 3slk_A          426 DASLRMLPRGGRFLELGKTDVR-------DPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAW  498 (795)
T ss_dssp             HHHHTSCTTCEEEEECCSTTCC-------CHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEE
T ss_pred             HHHHHHhcCCCEEEEecccccc-------CcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcceeE
Confidence            9999999999999999974321       0111222346777777665433 4456788999999999999999999999


Q ss_pred             CCCcHHHHHHHHHcCCCcceEEEEecC
Q 018404          329 GLENAPAALVGLFSGRNVGKQLVVVSR  355 (356)
Q Consensus       329 ~l~~~~~a~~~~~~~~~~gk~vv~~~~  355 (356)
                      +++++++||+.+.+++..||+|+++.+
T Consensus       499 ~l~~~~eA~~~l~~g~~~GKvVl~~~~  525 (795)
T 3slk_A          499 DVRQAPEALRHLSQARHVGKLVLTMPP  525 (795)
T ss_dssp             EGGGHHHHHHHHHHTCCCBEEEEECCC
T ss_pred             cHHHHHHHHHHHhcCCccceEEEecCc
Confidence            999999999999999999999998753

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1.8e-44  Score=338.60  Aligned_cols=299  Identities=16%  Similarity=0.099  Sum_probs=245.3

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCC-CeEEEEEEEeecCHHhhhhhcc--CCCCCCC---CCCCCCcceec
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGS-NAILVKNLYLSCDPYMRARMSF--NQDPDFS---SFTPGSPIEGF   83 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~-~evlV~v~~~~i~~~d~~~~~~--~~~~~~~---p~v~G~e~~~~   83 (356)
                      |||+++.++  |.+    ++++  ++|.| ++++ +||+|||.++|||++|++.+.+  ......+   |.++|||+  +
T Consensus         1 MkA~~~~~~--g~~----l~~~--~~~~P-~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~--~   69 (366)
T 2cdc_A            1 MKAIIVKPP--NAG----VQVK--DVDEK-KLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEA--I   69 (366)
T ss_dssp             CEEEEECTT--SCC----CEEE--ECCGG-GSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEE--E
T ss_pred             CeEEEEeCC--CCc----eEEE--ECcCC-CCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcce--E
Confidence            689999886  542    5664  56666 7889 9999999999999999998874  2222345   89999995  8


Q ss_pred             EEEEEecCCCCCCCCCCEEEE---------------------------------ccccceeEeecCCCcceeecCCCCCc
Q 018404           84 GVAKVVDSGHPEFKKGDLVWG---------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPL  130 (356)
Q Consensus        84 G~V~~vG~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~  130 (356)
                      |+|++  ++ ++|++||+|++                                 .|+|+||++++++. ++++ |++++ 
T Consensus        70 G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~l~-  143 (366)
T 2cdc_A           70 GVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKY-LVKI-PKSIE-  143 (366)
T ss_dssp             EEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGG-EEEE-CGGGT-
T ss_pred             EEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHH-eEEC-cCCcc-
Confidence            99999  77 88999999985                                 27899999999998 9999 99954 


Q ss_pred             cchhcccCcchHHHHHHHH--H--HcCCC--C-------CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc---chh
Q 018404          131 SYYTGILGMPGMTAWAGFY--E--ICAPK--K-------GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR---EKV  194 (356)
Q Consensus       131 ~~~~a~l~~~~~tA~~~l~--~--~~~~~--~-------g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~---~~~  194 (356)
                        +.|+++.++.|||+++.  +  .++++  +       |++|||+|+ |++|++++|+++.+|++|+++++++   +++
T Consensus       144 --~~Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~  220 (366)
T 2cdc_A          144 --DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ  220 (366)
T ss_dssp             --TTGGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH
T ss_pred             --hhhhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH
Confidence              44568889999999997  4  67888  8       999999998 9999999999999999999999998   887


Q ss_pred             ccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHH-HHHHHhhccCCeEEEEccccccC
Q 018404          195 WLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KML-DAVLLNMRLHGRIAACGMISQYN  272 (356)
Q Consensus       195 ~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~-~~~~~~l~~~G~~v~~g~~~~~~  272 (356)
                                +.++ ++|++.+ | .+  ++.+.+.+ +++++|++|||+|+ ..+ +.++++|+++|+++.+|..... 
T Consensus       221 ----------~~~~-~~ga~~v-~-~~--~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~-  283 (366)
T 2cdc_A          221 ----------TVIE-ETKTNYY-N-SS--NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSG-  283 (366)
T ss_dssp             ----------HHHH-HHTCEEE-E-CT--TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSC-
T ss_pred             ----------HHHH-HhCCcee-c-hH--HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCC-
Confidence                      8888 9999887 7 44  55556666 44689999999999 578 9999999999999999975431 


Q ss_pred             CCCCccccchHH---HHhhcceeeceeeecchhhHHHHHHHHHHHHHcCC------CccceeeeeCCCcHHHHHHHH-Hc
Q 018404          273 LSQPEGVHNLMN---VVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGK------VVYVEDVADGLENAPAALVGL-FS  342 (356)
Q Consensus       273 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~------l~~~i~~~~~l~~~~~a~~~~-~~  342 (356)
                          ....+...   ++.+++++.|+....     .++++++++++++|+      +++.++++|+|+++++||+.+ .+
T Consensus       284 ----~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~  354 (366)
T 2cdc_A          284 ----SVPLDYKTLQEIVHTNKTIIGLVNGQ-----KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREK  354 (366)
T ss_dssp             ----EEEEEHHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCC
T ss_pred             ----ccccChhhhHHHHhcCcEEEEecCCC-----HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhh
Confidence                12344555   788999998876654     678899999999999      567788999999999999984 34


Q ss_pred             CCCcceEEEEec
Q 018404          343 GRNVGKQLVVVS  354 (356)
Q Consensus       343 ~~~~gk~vv~~~  354 (356)
                      +...||+|++++
T Consensus       355 ~~~~gKvvi~~~  366 (366)
T 2cdc_A          355 EHGEIKIRILWE  366 (366)
T ss_dssp             CTTCCEEEEECC
T ss_pred             cCCceEEEEecC
Confidence            667899999864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=9.2e-35  Score=323.85  Aligned_cols=282  Identities=20%  Similarity=0.216  Sum_probs=235.8

Q ss_pred             CCeEEEEEEEeecCHHhhhhhccCCCC-------CCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc---cccceeE
Q 018404           43 SNAILVKNLYLSCDPYMRARMSFNQDP-------DFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT---TGWEEYS  112 (356)
Q Consensus        43 ~~evlV~v~~~~i~~~d~~~~~~~~~~-------~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~---g~~~~~~  112 (356)
                      ++||+|||.++|+|+.|+....+....       ...|.++|+|+  +|+|          ++||+|+++   |+|+||+
T Consensus      1559 ~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~--aG~V----------~vGdrV~g~~~~G~~Aeyv 1626 (2512)
T 2vz8_A         1559 CQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEF--SGRD----------ASGRRVMGMVPAEGLATSV 1626 (2512)
T ss_dssp             HHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEE--EEEE----------TTSCCEEEECSSCCSBSEE
T ss_pred             CCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEE--EEEE----------ccCCEEEEeecCCceeeEE
Confidence            799999999999999999877632211       12357899885  7776          379999987   7999999


Q ss_pred             eecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       113 ~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +++++. ++++ |+++++. ++|++++.++|||+++.+.+++++|++|||+||+|++|++++|+||.+|++|++++++++
T Consensus      1627 ~vp~~~-v~~i-Pd~ls~~-eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~ 1703 (2512)
T 2vz8_A         1627 LLLQHA-TWEV-PSTWTLE-EAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAE 1703 (2512)
T ss_dssp             ECCGGG-EEEC-CTTSCHH-HHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             Ecccce-EEEe-CCCCCHH-HHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChh
Confidence            999998 9999 9996555 688899999999999988889999999999999999999999999999999999999999


Q ss_pred             hhccccchhHHHHHHHhh---cCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          193 KVWLIPMQSQLVELLKNK---FGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                      +.          +.+++.   +|+++++++++. ++.+.+++.+++ |+|+||||+|++.+..++++|+++|+++.+|..
T Consensus      1704 k~----------~~l~~~~~~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~ 1772 (2512)
T 2vz8_A         1704 KR----------AYLQARFPQLDETCFANSRDT-SFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKF 1772 (2512)
T ss_dssp             HH----------HHHHHHCTTCCSTTEEESSSS-HHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCH
T ss_pred             hh----------HHHHhhcCCCCceEEecCCCH-HHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeecc
Confidence            88          888832   678899999887 899999999988 999999999999999999999999999999964


Q ss_pred             cccCCCCCccccchHHHHhhcceeeceeeecc----hhhHHHHHHHHHHHHHcCCCccceeeeeCCCcHHHHHHHHHcCC
Q 018404          269 SQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDY----FPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALVGLFSGR  344 (356)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~g~l~~~i~~~~~l~~~~~a~~~~~~~~  344 (356)
                      ....     ........+.+++++.++....+    +....+.++.+.+.+.+|.+++.++++|+++++++|++.+.+++
T Consensus      1773 ~~~~-----~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~ 1847 (2512)
T 2vz8_A         1773 DLSN-----NHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGK 1847 (2512)
T ss_dssp             HHHT-----TCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTC
T ss_pred             cccc-----cCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccC
Confidence            3211     01122345678888888766443    23345556666667778999999999999999999999999999


Q ss_pred             CcceEEEEecC
Q 018404          345 NVGKQLVVVSR  355 (356)
Q Consensus       345 ~~gk~vv~~~~  355 (356)
                      ..||+|+.+++
T Consensus      1848 ~~GKvVi~~~~ 1858 (2512)
T 2vz8_A         1848 HIGKVVIQVRE 1858 (2512)
T ss_dssp             CSSEEEEECSC
T ss_pred             ccceEEEECCC
Confidence            99999998854

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.90  E-value=2.3e-23  Score=178.17  Aligned_cols=189  Identities=20%  Similarity=0.327  Sum_probs=144.1

Q ss_pred             ceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccc
Q 018404          120 LFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPM  199 (356)
Q Consensus       120 l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~  199 (356)
                      ++++ |+++++. ++|++++++.|||+++.+.+++++|++|+|+||+|++|++++|+++..|++|+++++++++.     
T Consensus         4 ~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-----   76 (198)
T 1pqw_A            4 VVPI-PDTLADN-EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-----   76 (198)
T ss_dssp             -----------C-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-----
T ss_pred             eeEC-CCCCCHH-HHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH-----
Confidence            8899 9996555 68888899999999997778999999999999999999999999999999999999998887     


Q ss_pred             hhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCcc
Q 018404          200 QSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEG  278 (356)
Q Consensus       200 ~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  278 (356)
                           +.++ ++|.+.++|+.+. ++.+.+.+.+.+ ++|++|||+|...+..++++|+++|+++.+|......    ..
T Consensus        77 -----~~~~-~~g~~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~  145 (198)
T 1pqw_A           77 -----EMLS-RLGVEYVGDSRSV-DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA----DA  145 (198)
T ss_dssp             -----HHHH-TTCCSEEEETTCS-THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT----TC
T ss_pred             -----HHHH-HcCCCEEeeCCcH-HHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcC----cC
Confidence                 7888 8899888888776 778888887766 8999999999889999999999999999999754311    01


Q ss_pred             ccchHHHHhhcceeeceeeec----chhhHHHHHHHHHHHHHcCCCccceeee
Q 018404          279 VHNLMNVVYKRIRMEGFVVFD----YFPQYSRFLDAVLPYIREGKVVYVEDVA  327 (356)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~g~l~~~i~~~  327 (356)
                      ..+. ..+.+++++.++....    .+....+.++++++++++|++++.+..+
T Consensus       146 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          146 SLGL-AALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             EEEG-GGGTTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             cCCh-hHhcCCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            1122 2346778777654311    1222357899999999999999876543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.80  E-value=1.2e-08  Score=94.56  Aligned_cols=145  Identities=13%  Similarity=0.051  Sum_probs=96.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHHHHHHhCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~~~~~  234 (356)
                      +++|+|+|+ |++|+++++.++.+|++|++++++++++          +.++ +++...  +++.... ++.+.+.    
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~----------~~~~-~~~~~~~~~~~~~~~-~~~~~~~----  229 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL----------SYLE-TLFGSRVELLYSNSA-EIETAVA----  229 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHH-HHHGGGSEEEECCHH-HHHHHHH----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH----------HHHH-HhhCceeEeeeCCHH-HHHHHHc----
Confidence            489999995 9999999999999999999999999988          7777 554432  3443332 4444443    


Q ss_pred             CCccEEEeCCCchH-------HHHHHHhhccCCeEEEEccccccCCCCC-ccccchHHHHhhcceeeceeee--cch---
Q 018404          235 EGIDIYFEHVGGKM-------LDAVLLNMRLHGRIAACGMISQYNLSQP-EGVHNLMNVVYKRIRMEGFVVF--DYF---  301 (356)
Q Consensus       235 ~~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~---  301 (356)
                       ++|+||+|++...       ...+++.++++|+++.++...+...+.. ....+...+..+++++.+....  .++   
T Consensus       230 -~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~  308 (361)
T 1pjc_A          230 -EADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTA  308 (361)
T ss_dssp             -TCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHH
T ss_pred             -CCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHH
Confidence             5899999998743       5778899999999999987543221100 0111211233466666554321  111   


Q ss_pred             -hhH-HHHHHHHHHHHHcCC
Q 018404          302 -PQY-SRFLDAVLPYIREGK  319 (356)
Q Consensus       302 -~~~-~~~l~~~~~~~~~g~  319 (356)
                       ..+ +..++.+++++.+|.
T Consensus       309 s~~~~~~~~~~l~~l~~~G~  328 (361)
T 1pjc_A          309 TQALNNSTLPYVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHHHHHhCCc
Confidence             112 456788889998884

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.71  E-value=1.2e-07  Score=88.13  Aligned_cols=148  Identities=16%  Similarity=0.091  Sum_probs=91.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      ++++|+|+|+ |++|+++++.++.+|++|++++++.++.          +.+++.+|.....+..+..++.+.+.     
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~----------~~~~~~~g~~~~~~~~~~~~l~~~~~-----  228 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRL----------QYLDDVFGGRVITLTATEANIKKSVQ-----  228 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHTTTSEEEEECCHHHHHHHHH-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHH----------HHHHHhcCceEEEecCCHHHHHHHHh-----
Confidence            3689999996 9999999999999999999999998887          77763477764344333224444443     


Q ss_pred             CccEEEeCCCchH-------HHHHHHhhccCCeEEEEccccccCCCCC-ccccchHHHHhhcceeeceeee--cchh---
Q 018404          236 GIDIYFEHVGGKM-------LDAVLLNMRLHGRIAACGMISQYNLSQP-EGVHNLMNVVYKRIRMEGFVVF--DYFP---  302 (356)
Q Consensus       236 ~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~---  302 (356)
                      ++|+||+|+|...       ...+++.++++|+++.++...+..++.. ....+...+..+++.+.+....  ..+.   
T Consensus       229 ~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as  308 (369)
T 2eez_A          229 HADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTST  308 (369)
T ss_dssp             HCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHH
T ss_pred             CCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHH
Confidence            4899999999642       5788999999999999987543211100 0111122233456665554311  1111   


Q ss_pred             -h-HHHHHHHHHHHHHcCC
Q 018404          303 -Q-YSRFLDAVLPYIREGK  319 (356)
Q Consensus       303 -~-~~~~l~~~~~~~~~g~  319 (356)
                       . ....++.+++++.+|.
T Consensus       309 ~~~~~~~~~~l~~l~~~g~  327 (369)
T 2eez_A          309 FALTNQTLPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhcCh
Confidence             1 1456778888888774

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.68  E-value=9.2e-08  Score=89.17  Aligned_cols=98  Identities=17%  Similarity=0.160  Sum_probs=76.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      +|++|+|+| .|++|+++++.++.+|++|++++++.+++          +.+++.+|.....++....++.+.+.     
T Consensus       167 ~g~~V~ViG-~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l----------~~~~~~~g~~~~~~~~~~~~l~~~l~-----  230 (377)
T 2vhw_A          167 EPADVVVIG-AGTAGYNAARIANGMGATVTVLDINIDKL----------RQLDAEFCGRIHTRYSSAYELEGAVK-----  230 (377)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHTTTSSEEEECCHHHHHHHHH-----
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHH----------HHHHHhcCCeeEeccCCHHHHHHHHc-----
Confidence            578999999 59999999999999999999999999887          77773477753333322214444443     


Q ss_pred             CccEEEeCCCchH-------HHHHHHhhccCCeEEEEcccc
Q 018404          236 GIDIYFEHVGGKM-------LDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       236 ~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      ++|+||+|++...       ...+++.++++|.++.++...
T Consensus       231 ~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~  271 (377)
T 2vhw_A          231 RADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQ  271 (377)
T ss_dssp             HCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred             CCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEecCC
Confidence            4899999998643       578899999999999998643

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.62  E-value=4.8e-09  Score=98.81  Aligned_cols=169  Identities=15%  Similarity=0.053  Sum_probs=119.4

Q ss_pred             CCCCCcceecEEEEEecCCCCCCCCCCEEEE------------ccccceeEeecCCCcceeecCCCCCccchhcccCcch
Q 018404           74 FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWG------------TTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPG  141 (356)
Q Consensus        74 ~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~  141 (356)
                      ...|+|  +.+.+..+|++++++.+|+.++.            .|++++|+...... ++++ |.+  +..+.+....++
T Consensus        75 ~~~g~~--a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~-a~~~-~k~--v~~~~~~~~~~~  148 (404)
T 1gpj_A           75 VKRGSE--AVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRR-AINL-GKR--AREETRISEGAV  148 (404)
T ss_dssp             EEEHHH--HHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH-HHHH-HHH--HHHHSSTTCSCC
T ss_pred             eecCch--HhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHH-Hhhh-hcc--CcchhhhcCCCc
Confidence            345655  47788889999999999998731            17788888888777 8888 777  443333445567


Q ss_pred             HHHHHHHHHHc---CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE
Q 018404          142 MTAWAGFYEIC---APKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF  217 (356)
Q Consensus       142 ~tA~~~l~~~~---~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv  217 (356)
                      .++|.++....   .-.+|++|+|+| +|++|.++++.++.+|+ +|+++.++.++.          +.+..++|.+ ++
T Consensus       149 s~a~~av~~a~~~~~~l~g~~VlIiG-aG~iG~~~a~~l~~~G~~~V~v~~r~~~ra----------~~la~~~g~~-~~  216 (404)
T 1gpj_A          149 SIGSAAVELAERELGSLHDKTVLVVG-AGEMGKTVAKSLVDRGVRAVLVANRTYERA----------VELARDLGGE-AV  216 (404)
T ss_dssp             SHHHHHHHHHHHHHSCCTTCEEEEES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHH----------HHHHHHHTCE-EC
T ss_pred             cHHHHHHHHHHHHhccccCCEEEEEC-hHHHHHHHHHHHHHCCCCEEEEEeCCHHHH----------HHHHHHcCCc-ee
Confidence            78888774422   125799999999 69999999999999999 999999998775          4443378875 33


Q ss_pred             ecCCcccHHHHHHHhCCCCccEEEeCCCch-HH--HHHHHh--h--ccCCeEEEEccc
Q 018404          218 NYKEENDLDAALKRCFPEGIDIYFEHVGGK-ML--DAVLLN--M--RLHGRIAACGMI  268 (356)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~--~~~~~~--l--~~~G~~v~~g~~  268 (356)
                      ++.   ++.+.+.     ++|+||+|+|.. .+  ...+..  +  +++|.++.++..
T Consensus       217 ~~~---~l~~~l~-----~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          217 RFD---ELVDHLA-----RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             CGG---GHHHHHH-----TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             cHH---hHHHHhc-----CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            332   4444442     589999999873 22  244555  4  567777777653

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.49  E-value=1.7e-07  Score=87.70  Aligned_cols=125  Identities=16%  Similarity=0.138  Sum_probs=83.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCC-------------
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKE-------------  221 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~-------------  221 (356)
                      ++++|+|+| .|.+|++++++++.+|++|++.+++.++.          +.++ ++|++.+ ++..+             
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~----------~~~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~  238 (384)
T 1l7d_A          171 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATK----------EQVE-SLGGKFITVDDEAMKTAETAGGYAKE  238 (384)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTH----------HHHH-HTTCEECCC-----------------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HcCCeEEeecccccccccccccchhh
Confidence            689999999 79999999999999999999999998887          8888 7887544 22211             


Q ss_pred             --c---ccHHHHHHHhCCCCccEEEeCC---Cch---H-HHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhc
Q 018404          222 --E---NDLDAALKRCFPEGIDIYFEHV---GGK---M-LDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR  289 (356)
Q Consensus       222 --~---~~~~~~~~~~~~~~~d~vid~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  289 (356)
                        .   ....+.+.+... ++|+||+|+   |..   . ...+++.|++++.++.++...+...+..   .+...+..++
T Consensus       239 ~s~~~~~~~~~~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~---~~~~~~~~~~  314 (384)
T 1l7d_A          239 MGEEFRKKQAEAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLS---EPGKIVVKHG  314 (384)
T ss_dssp             ------CCHHHHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTC---CTTCEEEETT
T ss_pred             cCHHHHhhhHHHHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecc---cCCcEEEECC
Confidence              0   001122444333 599999999   642   2 3788999999999999986433222110   1111233566


Q ss_pred             ceeecee
Q 018404          290 IRMEGFV  296 (356)
Q Consensus       290 ~~~~~~~  296 (356)
                      +++.+..
T Consensus       315 v~i~g~~  321 (384)
T 1l7d_A          315 VKIVGHT  321 (384)
T ss_dssp             EEEECCS
T ss_pred             EEEEEeC
Confidence            7766654

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.44  E-value=5.8e-07  Score=86.00  Aligned_cols=105  Identities=18%  Similarity=0.190  Sum_probs=83.1

Q ss_pred             chHHHHHHHHHHc-CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          140 PGMTAWAGFYEIC-APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       140 ~~~tA~~~l~~~~-~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      ...++|+++.+.. ...+|++|+|.| .|.+|..+++.++.+|++|+++++++.+.          +.++ ++|++ ++ 
T Consensus       256 ~~~s~~~g~~r~~~~~l~GktV~IiG-~G~IG~~~A~~lka~Ga~Viv~d~~~~~~----------~~A~-~~Ga~-~~-  321 (494)
T 3ce6_A          256 TRHSLIDGINRGTDALIGGKKVLICG-YGDVGKGCAEAMKGQGARVSVTEIDPINA----------LQAM-MEGFD-VV-  321 (494)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTCE-EC-
T ss_pred             hhhhhhHHHHhccCCCCCcCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HcCCE-Ee-
Confidence            4456777765432 267899999999 79999999999999999999999998887          7777 88875 22 


Q ss_pred             cCCcccHHHHHHHhCCCCccEEEeCCCc-hHHH-HHHHhhccCCeEEEEccc
Q 018404          219 YKEENDLDAALKRCFPEGIDIYFEHVGG-KMLD-AVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~  268 (356)
                           ++.+.+     .++|+|++|+|. ..+. ..++.++++|+++.+|..
T Consensus       322 -----~l~e~l-----~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          322 -----TVEEAI-----GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             -----CHHHHG-----GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             -----cHHHHH-----hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCC
Confidence                 333333     258999999998 4454 789999999999999873

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.26  E-value=2.6e-06  Score=79.82  Aligned_cols=125  Identities=14%  Similarity=0.131  Sum_probs=82.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE-ecC-------------C
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF-NYK-------------E  221 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv-~~~-------------~  221 (356)
                      ++++|+|+| .|.+|+.++++++.+|++|++++++.+++          +.++ ++|+..+. +..             .
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~v~D~~~~~~----------~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~  238 (401)
T 1x13_A          171 PPAKVMVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVK----------EQVQ-SMGAEFLELDFKEEAGSGDGYAKVMS  238 (401)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCGGGH----------HHHH-HTTCEECCC--------CCHHHHHHS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHH----------HHHH-HcCCEEEEecccccccccccchhhcc
Confidence            578999999 79999999999999999999999999987          7777 88875431 210             0


Q ss_pred             cccH----HHHHHHhCCCCccEEEeCC---Cc---hHH-HHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcc
Q 018404          222 ENDL----DAALKRCFPEGIDIYFEHV---GG---KML-DAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRI  290 (356)
Q Consensus       222 ~~~~----~~~~~~~~~~~~d~vid~~---g~---~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  290 (356)
                      . ++    .+.+.+... ++|+||+|+   |.   ..+ ..+++.|++++.++.++...+...+......+  .+..+++
T Consensus       239 ~-~~~~~~~~~l~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p--~~~~~gv  314 (401)
T 1x13_A          239 D-AFIKAEMELFAAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEI--FTTENGV  314 (401)
T ss_dssp             H-HHHHHHHHHHHHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSE--EECTTSC
T ss_pred             H-HHHHHHHHHHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCc--eEEECCE
Confidence            0 11    112333322 589999995   32   122 68899999999999999643322221100000  1345677


Q ss_pred             eeecee
Q 018404          291 RMEGFV  296 (356)
Q Consensus       291 ~~~~~~  296 (356)
                      ++.+..
T Consensus       315 ~i~g~~  320 (401)
T 1x13_A          315 KVIGYT  320 (401)
T ss_dssp             EEECCS
T ss_pred             EEEeeC
Confidence            777654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.25  E-value=2.6e-06  Score=75.43  Aligned_cols=106  Identities=13%  Similarity=0.185  Sum_probs=75.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+.++.+...|++|++++++++++          +.+.+++|...   ..|-.+.++..+.+.+.
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l----------~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   97 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVL----------DAAIAEIGGGAVGIQADSANLAELDRLYEKV   97 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHcCCCeEEEEecCCCHHHHHHHHHHH
Confidence            589999999999999999999999999999999998887          54444776532   23444432333333322


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEcccccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMISQY  271 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~  271 (356)
                      ..  |++|+++++.|..                          ..+.+++.|+++|++|.++...+.
T Consensus        98 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~  164 (273)
T 4fgs_A           98 KAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS  164 (273)
T ss_dssp             HHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc
Confidence            21  3799999999831                          125556678889999999876553

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.16  E-value=1.4e-05  Score=70.07  Aligned_cols=108  Identities=21%  Similarity=0.310  Sum_probs=73.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++++      ++..++++ +.|...   ..|-.+.++..+.+.+.
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~------~~~~~~i~-~~g~~~~~~~~Dvt~~~~v~~~~~~~   78 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRL------NQIVQELR-GMGKEVLGVKADVSKKKDVEEFVRRT   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999998876      44445555 556532   23444432333333222


Q ss_pred             CC--CCccEEEeCCCc-h--------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGG-K--------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~-~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      ..  |++|+++++.|. .                          ..+.+++.|.  .+|++|.+++..+
T Consensus        79 ~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g  147 (254)
T 4fn4_A           79 FETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG  147 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhh
Confidence            11  379999999882 1                          1144555553  3689999988655

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.15  E-value=1.1e-05  Score=70.22  Aligned_cols=105  Identities=13%  Similarity=0.090  Sum_probs=73.1

Q ss_pred             HHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecC
Q 018404          144 AWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYK  220 (356)
Q Consensus       144 A~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~  220 (356)
                      +.+.+ ....+.++++||..| +| .|..+..+++. +.+|++++.+++..          +.+++   ..+...-++..
T Consensus        80 ~~~~~-~~~~~~~~~~vldiG-~G-~G~~~~~l~~~-~~~v~~vD~~~~~~----------~~a~~~~~~~~~~~~~~~~  145 (248)
T 2yvl_A           80 SFYIA-LKLNLNKEKRVLEFG-TG-SGALLAVLSEV-AGEVWTFEAVEEFY----------KTAQKNLKKFNLGKNVKFF  145 (248)
T ss_dssp             HHHHH-HHTTCCTTCEEEEEC-CT-TSHHHHHHHHH-SSEEEEECSCHHHH----------HHHHHHHHHTTCCTTEEEE
T ss_pred             HHHHH-HhcCCCCCCEEEEeC-CC-ccHHHHHHHHh-CCEEEEEecCHHHH----------HHHHHHHHHcCCCCcEEEE
Confidence            33444 456788999999999 56 69999999998 88999999998877          44442   33541111111


Q ss_pred             CcccHHHHHHHhC-C-CCccEEEeCCCc--hHHHHHHHhhccCCeEEEEcc
Q 018404          221 EENDLDAALKRCF-P-EGIDIYFEHVGG--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       221 ~~~~~~~~~~~~~-~-~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .. ++.    +.. . +++|+||...+.  ..+..+.+.|+++|+++....
T Consensus       146 ~~-d~~----~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          146 NV-DFK----DAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             CS-CTT----TSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             Ec-Chh----hcccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            11 221    122 2 379999988775  578999999999999987743

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.14  E-value=1.2e-05  Score=70.58  Aligned_cols=109  Identities=18%  Similarity=0.267  Sum_probs=74.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++++      ++..+.++ +.|....   .|-.++++..+.+.+.
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~------~~~~~~l~-~~g~~~~~~~~Dv~~~~~v~~~~~~~   80 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLL------AESVDTLT-RKGYDAHGVAFDVTDELAIEAAFSKL   80 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHH------HHHHHHHH-HTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            588999999999999999999999999999999988776      33344555 4554322   2434432333333333


Q ss_pred             C--CCCccEEEeCCCch--------------------------HHHHHHHhh---ccCCeEEEEcccccc
Q 018404          233 F--PEGIDIYFEHVGGK--------------------------MLDAVLLNM---RLHGRIAACGMISQY  271 (356)
Q Consensus       233 ~--~~~~d~vid~~g~~--------------------------~~~~~~~~l---~~~G~~v~~g~~~~~  271 (356)
                      .  -|++|+++++.|..                          ..+.+++.|   ..+|++|.++.....
T Consensus        81 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~  150 (255)
T 4g81_D           81 DAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ  150 (255)
T ss_dssp             HHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             HHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc
Confidence            2  23799999999831                          124555556   246899999986553

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.03  E-value=2.6e-06  Score=67.96  Aligned_cols=108  Identities=11%  Similarity=0.102  Sum_probs=76.0

Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      +.+++++++... ....+.+|+|+| +|.+|.+.++.++..|++|++.+++.++.          +.+.++++.. +...
T Consensus         5 ~~sv~~~a~~~~-~~~~~~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~----------~~~a~~~~~~-~~~~   71 (144)
T 3oj0_A            5 KVSIPSIVYDIV-RKNGGNKILLVG-NGMLASEIAPYFSYPQYKVTVAGRNIDHV----------RAFAEKYEYE-YVLI   71 (144)
T ss_dssp             CCSHHHHHHHHH-HHHCCCEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESCHHHH----------HHHHHHHTCE-EEEC
T ss_pred             cccHHHHHHHHH-HhccCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCHHHH----------HHHHHHhCCc-eEee
Confidence            345666676443 334489999999 79999999999988999999999998886          5544477753 2223


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                      .   ++.+.+.     ++|+||.|++..........+++++.++.++.+
T Consensus        72 ~---~~~~~~~-----~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           72 N---DIDSLIK-----NNDVIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             S---CHHHHHH-----TCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             c---CHHHHhc-----CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence            2   4444444     489999999974221122678888999888763

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.00  E-value=1.4e-05  Score=69.45  Aligned_cols=102  Identities=13%  Similarity=0.186  Sum_probs=70.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-CEEEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      +|+++||+||++|+|.+.++.+...|++|++++++.+++          +... .-.. ....|-.+++++.+.+.++  
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~----------~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~--   76 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV----------HAPR-HPRIRREELDITDSQRLQRLFEAL--   76 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST----------TSCC-CTTEEEEECCTTCHHHHHHHHHHC--
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------hhhh-cCCeEEEEecCCCHHHHHHHHHhc--
Confidence            689999999999999999999999999999999988776          3222 1111 1233444442343344433  


Q ss_pred             CCccEEEeCCCc-h-----------------------HHHHHHHhhc-cCCeEEEEccccc
Q 018404          235 EGIDIYFEHVGG-K-----------------------MLDAVLLNMR-LHGRIAACGMISQ  270 (356)
Q Consensus       235 ~~~d~vid~~g~-~-----------------------~~~~~~~~l~-~~G~~v~~g~~~~  270 (356)
                      +++|+++++.|. .                       ..+.++..|+ .+|++|.+++..+
T Consensus        77 g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           77 PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            479999999983 1                       1134455564 4799999998655

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.00  E-value=3e-05  Score=68.05  Aligned_cols=109  Identities=11%  Similarity=0.125  Sum_probs=71.2

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-C-E--EEecCCcccHHHHH
Q 018404          156 KGEYIYVSAASG--AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-D-D--AFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g--~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~-~--vv~~~~~~~~~~~~  229 (356)
                      +|+++||+||+|  |+|++.++.+...|++|+.+.++++..      +++.+.++ +.+. . .  .+|-.+.++..+.+
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~   77 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSR------KELEKLLE-QLNQPEAHLYQIDVQSDEEVINGF   77 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGH------HHHHHHHG-GGTCSSCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCCcEEEEEccCCCHHHHHHHH
Confidence            488999999876  999999999999999999999987765      33334444 4443 1 2  23444432333333


Q ss_pred             HHhCC--CCccEEEeCCCch---------------HH---------------HHHHHhhccCCeEEEEcccccc
Q 018404          230 KRCFP--EGIDIYFEHVGGK---------------ML---------------DAVLLNMRLHGRIAACGMISQY  271 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~~~  271 (356)
                      .+...  |++|+++++.|..               .+               +.+.+.++++|++|.+++..+.
T Consensus        78 ~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~  151 (256)
T 4fs3_A           78 EQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE  151 (256)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT
T ss_pred             HHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc
Confidence            22211  4799999988730               11               2233456778999999876553

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.00  E-value=1.5e-05  Score=70.02  Aligned_cols=105  Identities=13%  Similarity=0.141  Sum_probs=71.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.          +.+.++++.. .  ..|..+.+++...+.+.
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNI----------ARIREEFGPRVHALRSDIADLNEIAVLGAAA   76 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhCCcceEEEccCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999998876          5555355432 1  22444432233222222


Q ss_pred             C--CCCccEEEeCCCch-----------H---------------HHHHHHhhccCCeEEEEccccc
Q 018404          233 F--PEGIDIYFEHVGGK-----------M---------------LDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~--~~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      .  .+++|+++++.|..           .               .+.++..++++|++|.++....
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            1  13799999998731           1               1333445566899999987654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.94  E-value=5.6e-05  Score=66.69  Aligned_cols=108  Identities=19%  Similarity=0.303  Sum_probs=70.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+...   .+|..+.+++...+.+.
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dv~d~~~v~~~~~~~   75 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARI------EAIATEIR-DAGGTALAQVLDVTDRHSVAAFAQAA   75 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH------HHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999988776      23333444 344421   23444432333333322


Q ss_pred             CC--CCccEEEeCCCch-----------H---------------HHHHHHhh--ccCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK-----------M---------------LDAVLLNM--RLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~~  270 (356)
                      ..  +++|+++++.|..           .               .+.+++.|  +.+|++|.+++...
T Consensus        76 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~  143 (264)
T 3tfo_A           76 VDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGA  143 (264)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHH
Confidence            11  3699999998831           1               12334444  34689999987654

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.93  E-value=7.4e-05  Score=66.24  Aligned_cols=103  Identities=19%  Similarity=0.280  Sum_probs=70.6

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCc
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEE  222 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~  222 (356)
                      +.....+.++++||-.| +|. |..++.+++..  +.+|++++.+++..          +.+++   ..+...-+.....
T Consensus       104 i~~~~~~~~~~~VLDiG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~----------~~a~~~~~~~~~~~~v~~~~~  171 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTG-VGS-GAMCAVLARAVGSSGKVFAYEKREEFA----------KLAESNLTKWGLIERVTIKVR  171 (277)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHTTTTCEEEEECCCHHHH----------HHHHHHHHHTTCGGGEEEECC
T ss_pred             HHHHhCCCCCCEEEEEC-CcC-CHHHHHHHHHhCCCcEEEEEECCHHHH----------HHHHHHHHHcCCCCCEEEEEC
Confidence            33556789999999999 555 88899999986  56999999988876          44442   3454111222121


Q ss_pred             ccHHHHHHHhCCCCccEEEeCCCc--hHHHHHHHhhccCCeEEEEc
Q 018404          223 NDLDAALKRCFPEGIDIYFEHVGG--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       223 ~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                       ++.+.   +..+.+|+|+.....  ..+..+.+.|+++|+++...
T Consensus       172 -d~~~~---~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          172 -DISEG---FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             -CGGGC---CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             -CHHHc---ccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence             22211   122379999976665  57889999999999998764

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.92  E-value=3e-05  Score=69.11  Aligned_cols=103  Identities=12%  Similarity=0.059  Sum_probs=72.6

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALK  230 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~  230 (356)
                      .++++++++||.+| +|+.|+.++.+++..|++|++++.+++..      +.+.+.++ +.|.+. +..... +..+   
T Consensus       117 la~l~~g~rVLDIG-cG~G~~ta~~lA~~~ga~V~gIDis~~~l------~~Ar~~~~-~~gl~~-v~~v~g-Da~~---  183 (298)
T 3fpf_A          117 LGRFRRGERAVFIG-GGPLPLTGILLSHVYGMRVNVVEIEPDIA------ELSRKVIE-GLGVDG-VNVITG-DETV---  183 (298)
T ss_dssp             HTTCCTTCEEEEEC-CCSSCHHHHHHHHTTCCEEEEEESSHHHH------HHHHHHHH-HHTCCS-EEEEES-CGGG---
T ss_pred             HcCCCCcCEEEEEC-CCccHHHHHHHHHccCCEEEEEECCHHHH------HHHHHHHH-hcCCCC-eEEEEC-chhh---
Confidence            47889999999999 88777888888888899999999998887      22223333 446532 122111 2111   


Q ss_pred             HhCCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          231 RCFPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       231 ~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                       +..+.||+||.+...    ..+..+.+.|+|+|+++....
T Consensus       184 -l~d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          184 -IDGLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             -GGGCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             -CCCCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence             223479999975543    378899999999999997654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.92  E-value=9.3e-05  Score=65.05  Aligned_cols=85  Identities=19%  Similarity=0.241  Sum_probs=56.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKR  231 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~  231 (356)
                      -++.+|||+||+|++|.++++.+...|++|++++++.++.      +++.+.+. +.+.. .  .+|..+.+++...+.+
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~   99 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKL------RAVEREIV-AAGGEAESHACDLSHSDAIAAFATG   99 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-HhCCceeEEEecCCCHHHHHHHHHH
Confidence            3578999999999999999999889999999999988775      22223333 33432 1  2244443233333333


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +.+|++|.+.|.
T Consensus       100 ~~~~~g~id~lv~~Ag~  116 (262)
T 3rkr_A          100 VLAAHGRCDVLVNNAGV  116 (262)
T ss_dssp             HHHHHSCCSEEEECCCC
T ss_pred             HHHhcCCCCEEEECCCc
Confidence            211  369999999884

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.91  E-value=8.7e-05  Score=64.58  Aligned_cols=81  Identities=19%  Similarity=0.301  Sum_probs=56.7

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAALK  230 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~  230 (356)
                      -.++++|||+||+|++|.++++.+...|++|++++++.++.          +.+.+++.....   .|..+.+.+.+.+.
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   80 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKL----------KSLGNALKDNYTIEVCNLANKEECSNLIS   80 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHCSSEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH----------HHHHHHhccCccEEEcCCCCHHHHHHHHH
Confidence            35688999999999999999999999999999999988876          555435443322   23333212333333


Q ss_pred             HhCCCCccEEEeCCCc
Q 018404          231 RCFPEGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~~~~d~vid~~g~  246 (356)
                      +.  +++|++|.+.|.
T Consensus        81 ~~--~~id~li~~Ag~   94 (249)
T 3f9i_A           81 KT--SNLDILVCNAGI   94 (249)
T ss_dssp             TC--SCCSEEEECCC-
T ss_pred             hc--CCCCEEEECCCC
Confidence            32  369999999883

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.90  E-value=7.2e-05  Score=65.15  Aligned_cols=103  Identities=10%  Similarity=-0.019  Sum_probs=69.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHHHHHHhCC-
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDAALKRCFP-  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~~~~~-  234 (356)
                      ++|||+||++|+|.+.++.+...|++|+.+++++++.          +.+.++.+-..  ..|-.+.++....+.+... 
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~----------~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   72 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS----------ADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK   72 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999998876          66652332211  2244443233333322221 


Q ss_pred             -CCccEEEeCCCch-----------H---------------HHHHHHhh-ccCCeEEEEccccc
Q 018404          235 -EGIDIYFEHVGGK-----------M---------------LDAVLLNM-RLHGRIAACGMISQ  270 (356)
Q Consensus       235 -~~~d~vid~~g~~-----------~---------------~~~~~~~l-~~~G~~v~~g~~~~  270 (356)
                       |++|+++++.|..           .               .+.+++.| +.+|++|.+++..+
T Consensus        73 ~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~  136 (247)
T 3ged_A           73 LQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA  136 (247)
T ss_dssp             HSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence             3799999998721           1               13344444 45799999987654

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.90  E-value=7.3e-05  Score=66.11  Aligned_cols=81  Identities=14%  Similarity=0.150  Sum_probs=57.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.          +.+.++++..   ...|..+.+++.+.+.+.
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDL----------AGAAASVGRGAVHHVVDLTNEVSVRALIDFT   79 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCH----------HHHHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHH----------HHHHHHhCCCeEEEECCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999998876          5544355542   223444432333333322


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|+++++.|.
T Consensus        80 ~~~~g~id~lv~nAg~   95 (271)
T 3tzq_B           80 IDTFGRLDIVDNNAAH   95 (271)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence            11  369999998873

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.89  E-value=5.3e-05  Score=66.86  Aligned_cols=81  Identities=21%  Similarity=0.320  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.          +.+.++++... .  .|..+.+++.+.+.+.
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKL----------KEIAADLGKDVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHCSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhCCceEEEEeecCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776          54443666532 2  2334432333333322


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|++.|.
T Consensus        96 ~~~~g~iD~lvnnAg~  111 (266)
T 3grp_A           96 EREMEGIDILVNNAGI  111 (266)
T ss_dssp             HHHHTSCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence            11  379999999984

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.89  E-value=2.4e-05  Score=72.12  Aligned_cols=105  Identities=19%  Similarity=0.107  Sum_probs=75.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE-e--------cCC---c-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF-N--------YKE---E-  222 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv-~--------~~~---~-  222 (356)
                      ++.+|+|+| .|.+|+.+++.++.+|++|++.+++.+++          +.++ ++|.+.+- +        |..   + 
T Consensus       183 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l----------~~~~-~lGa~~~~l~~~~~~~~gya~~~~~~  250 (381)
T 3p2y_A          183 KPASALVLG-VGVAGLQALATAKRLGAKTTGYDVRPEVA----------EQVR-SVGAQWLDLGIDAAGEGGYARELSEA  250 (381)
T ss_dssp             CCCEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSGGGH----------HHHH-HTTCEECCCC-------------CHH
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HcCCeEEeccccccccccchhhhhHH
Confidence            578999999 79999999999999999999999999998          8888 78874321 0        000   0 


Q ss_pred             --ccHHHHHHHhCCCCccEEEeCCCch-------HHHHHHHhhccCCeEEEEccccccCC
Q 018404          223 --NDLDAALKRCFPEGIDIYFEHVGGK-------MLDAVLLNMRLHGRIAACGMISQYNL  273 (356)
Q Consensus       223 --~~~~~~~~~~~~~~~d~vid~~g~~-------~~~~~~~~l~~~G~~v~~g~~~~~~~  273 (356)
                        ..-.+.+.+.. ..+|+||.|+..+       ....+++.+++++.++.++...+.+.
T Consensus       251 ~~~~~~~~l~e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~  309 (381)
T 3p2y_A          251 ERAQQQQALEDAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNC  309 (381)
T ss_dssp             HHHHHHHHHHHHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred             HHhhhHHHHHHHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence              00011233322 2699999986321       24799999999999999987655443

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.88  E-value=9.5e-05  Score=65.77  Aligned_cols=109  Identities=19%  Similarity=0.282  Sum_probs=70.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|.++++.+...|++|++++++.++.     .+++.+.++ +.+... .  .|..+.+++...+.+.
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTES-----AEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-----HHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH-----HHHHHHHHH-HhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999876542     011223344 445432 2  2433332333333322


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ..  +++|++|++.|..                          ..+.+++.|+.+|++|.++....
T Consensus       102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A          102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence            11  3699999998831                          12444555666799999987654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.87  E-value=7.4e-05  Score=65.57  Aligned_cols=81  Identities=15%  Similarity=0.232  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.          +.+.++++.. .  ..|..+.+++.+.+.+.
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   76 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERA----------RQAAAEIGPAAYAVQMDVTRQDSIDAAIAAT   76 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhCCCceEEEeeCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776          4444355542 1  22444432333333322


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|++|.+.|.
T Consensus        77 ~~~~g~id~lv~~Ag~   92 (259)
T 4e6p_A           77 VEHAGGLDILVNNAAL   92 (259)
T ss_dssp             HHHSSSCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence            1  1379999999883

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.87  E-value=7e-05  Score=65.16  Aligned_cols=80  Identities=10%  Similarity=0.179  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~  234 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.++++... ..|..+.+++.+.+.+...
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPL----------REAAEAVGAHPVVMDVADPASVERGFAEALA   73 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHTTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHcCCEEEEecCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999988776          55543555422 2344443233333333211


Q ss_pred             --CCccEEEeCCC
Q 018404          235 --EGIDIYFEHVG  245 (356)
Q Consensus       235 --~~~d~vid~~g  245 (356)
                        +++|++|++.|
T Consensus        74 ~~g~id~lvn~Ag   86 (245)
T 1uls_A           74 HLGRLDGVVHYAG   86 (245)
T ss_dssp             HHSSCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              36999999998

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.87  E-value=8.5e-05  Score=66.77  Aligned_cols=84  Identities=20%  Similarity=0.302  Sum_probs=57.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      -.|.+|||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ ..+...   .+|..+.+++.+.+.+
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dv~d~~~v~~~~~~  101 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPAL------EQAVNGLR-GQGFDAHGVVCDVRHLDEMVRLADE  101 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999999998776      22233344 334321   2344443233333333


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|++|.+.|
T Consensus       102 ~~~~~g~id~lvnnAg  117 (301)
T 3tjr_A          102 AFRLLGGVDVVFSNAG  117 (301)
T ss_dssp             HHHHHSSCSEEEECCC
T ss_pred             HHHhCCCCCEEEECCC
Confidence            211  37999999988

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.87  E-value=4.3e-05  Score=71.02  Aligned_cols=104  Identities=15%  Similarity=0.123  Sum_probs=74.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe-------------cCC-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN-------------YKE-  221 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~-------------~~~-  221 (356)
                      ++.+|+|+| .|.+|+.++++++.+|++|++.+++.+++          +.++ ++|...+..             |.. 
T Consensus       189 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l----------~~~~-~~G~~~~~~~~~~~~d~~~~~~ya~e  256 (405)
T 4dio_A          189 PAAKIFVMG-AGVAGLQAIATARRLGAVVSATDVRPAAK----------EQVA-SLGAKFIAVEDEEFKAAETAGGYAKE  256 (405)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSTTHH----------HHHH-HTTCEECCCCC---------------
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEcCCHHHH----------HHHH-HcCCceeecccccccccccccchhhh
Confidence            568999999 79999999999999999999999999998          8888 788742210             110 


Q ss_pred             -cccH----HHHHHHhCCCCccEEEeCCCch-------HHHHHHHhhccCCeEEEEccccccC
Q 018404          222 -ENDL----DAALKRCFPEGIDIYFEHVGGK-------MLDAVLLNMRLHGRIAACGMISQYN  272 (356)
Q Consensus       222 -~~~~----~~~~~~~~~~~~d~vid~~g~~-------~~~~~~~~l~~~G~~v~~g~~~~~~  272 (356)
                       .+.+    .+.+.+... +.|+||.|+..+       ....+++.+++++.+|.++...+.+
T Consensus       257 ~s~~~~~~~~~~l~e~l~-~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~  318 (405)
T 4dio_A          257 MSGEYQVKQAALVAEHIA-KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGN  318 (405)
T ss_dssp             --CHHHHHHHHHHHHHHH-TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCS
T ss_pred             cchhhhhhhHhHHHHHhc-CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCC
Confidence             0011    112222211 589999996421       3478999999999999998644433

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.87  E-value=0.00011  Score=64.91  Aligned_cols=107  Identities=17%  Similarity=0.256  Sum_probs=70.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc-hhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE-KVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      .|+++||+||+|++|.++++.+...|++|+++.++.. +.      +++.+.++ +.+...   ..|..+.+++.+.+.+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~------~~~~~~l~-~~~~~~~~~~~Dv~d~~~v~~~~~~  102 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERA------QAVVSEIE-QAGGRAVAIRADNRDAEAIEQAIRE  102 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            5789999999999999999999999999999876543 32      22334444 445432   2243443233333333


Q ss_pred             hCC--CCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEcccc
Q 018404          232 CFP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      ...  +++|++|.+.|..                          ..+.+++.++++|++|.++...
T Consensus       103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            221  3799999998830                          1245556677889999998743

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.86  E-value=8.1e-05  Score=56.45  Aligned_cols=93  Identities=17%  Similarity=0.190  Sum_probs=63.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~  233 (356)
                      .+.+|+|+|+ |.+|..+++.+...| .+|+++++++++.          +.+. ..+...+ .|..+.    +.+.+..
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~----------~~~~-~~~~~~~~~d~~~~----~~~~~~~   67 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAAL----------AVLN-RMGVATKQVDAKDE----AGLAKAL   67 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHH----------HHHH-TTTCEEEECCTTCH----HHHHHHT
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHH----------HHHH-hCCCcEEEecCCCH----HHHHHHH
Confidence            3568999997 999999999999999 7999999998887          7666 6665432 233321    2344333


Q ss_pred             CCCccEEEeCCCchHHHHHHH-hhccCCeEEEE
Q 018404          234 PEGIDIYFEHVGGKMLDAVLL-NMRLHGRIAAC  265 (356)
Q Consensus       234 ~~~~d~vid~~g~~~~~~~~~-~l~~~G~~v~~  265 (356)
                      . ++|+||+|++........+ ++..+.+++.+
T Consensus        68 ~-~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           68 G-GFDAVISAAPFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             T-TCSEEEECSCGGGHHHHHHHHHHTTCEEECC
T ss_pred             c-CCCEEEECCCchhhHHHHHHHHHhCCCEEEe
Confidence            2 6999999998754444444 44444455443

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.86  E-value=6.9e-05  Score=66.56  Aligned_cols=105  Identities=19%  Similarity=0.275  Sum_probs=70.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.          +.+.++++.. .  ..|..+.+++.+.+.+.
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   97 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAA----------DAAATKIGCGAAACRVDVSDEQQIIAMVDAC   97 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHHHHHCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHcCCcceEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776          5544355542 2  22444432333333322


Q ss_pred             CC--CCccEEEeCCCch-----------H---------------HHHHHHhh--ccCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK-----------M---------------LDAVLLNM--RLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~~  270 (356)
                      ..  +++|+++++.|..           .               .+.+++.+  +.+|++|.++....
T Consensus        98 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~  165 (277)
T 3gvc_A           98 VAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAG  165 (277)
T ss_dssp             HHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh
Confidence            11  3799999998831           1               23344444  45689999987654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.86  E-value=0.0001  Score=65.14  Aligned_cols=108  Identities=17%  Similarity=0.232  Sum_probs=71.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||++++|.++++.+...|++|+++.++..+.     .+++.+.++ +.+...   ..|..+.+++.+.+.+.
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~   90 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKD-----AEKVVSEIK-ALGSDAIAIKADIRQVPEIVKLFDQA   90 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-----HHHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-----HHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999987654331     123334444 455432   22444432333333332


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEcccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      ..  +++|+++++.|..                          ..+.+++.+.++|++|.++...
T Consensus        91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            21  3699999998831                          1245566777899999998754

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.86  E-value=5.8e-05  Score=65.83  Aligned_cols=80  Identities=25%  Similarity=0.432  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||+|++|.++++.+...|++|+++++++++.          +.+.+.++..   ..+|..+.+++.+.+.+.
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA----------QAISDYLGDNGKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHHHHHGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhcccceEEEEeCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776          4443233321   223444432333333332


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|+++++.|
T Consensus        78 ~~~~g~iD~lv~nAg   92 (248)
T 3op4_A           78 TDEFGGVDILVNNAG   92 (248)
T ss_dssp             HHHHCCCSEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            21  37999999988

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.86  E-value=8.9e-05  Score=65.83  Aligned_cols=105  Identities=15%  Similarity=0.236  Sum_probs=70.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.          +.+.++++...   ..|..+.+++.+.+.+.
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAA----------VRVANEIGSKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776          55543555432   23444432333333322


Q ss_pred             CC--CCccEEEeCCCc-----------hH---------------HHHHHHhhcc--CCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGG-----------KM---------------LDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~-----------~~---------------~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      ..  +++|++|.+.|.           +.               .+.+++.+++  +|++|.++....
T Consensus        96 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  163 (277)
T 4dqx_A           96 TAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA  163 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh
Confidence            11  369999999982           11               2344555544  579999987654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.85  E-value=8.6e-05  Score=65.36  Aligned_cols=85  Identities=11%  Similarity=0.171  Sum_probs=57.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      -.+.++||+||++++|.+.++.+...|++|++++++.++.      +++.+.++ +.+...   ..|..+.+++.+.+.+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERL------EDVAKQVT-DTGRRALSVGTDITDDAQVAHLVDE   81 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999999988776      22333344 344321   2244443233333332


Q ss_pred             hC--CCCccEEEeCCCc
Q 018404          232 CF--PEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~--~~~~d~vid~~g~  246 (356)
                      ..  .+++|++|++.|.
T Consensus        82 ~~~~~g~id~lv~nAg~   98 (264)
T 3ucx_A           82 TMKAYGRVDVVINNAFR   98 (264)
T ss_dssp             HHHHTSCCSEEEECCCS
T ss_pred             HHHHcCCCcEEEECCCC
Confidence            21  1379999998863

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.85  E-value=0.00013  Score=65.29  Aligned_cols=108  Identities=14%  Similarity=0.208  Sum_probs=69.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EE--ecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AF--NYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv--~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||+|++|.++++.+...|++|++++++.++.     .+++.+.++ +.+... .+  |..+.+++.+.+.+.
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-----~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~  119 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGD-----ANETKQYVE-KEGVKCVLLPGDLSDEQHCKDIVQET  119 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-----HHHHHHHHH-TTTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH-----HHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999886642     112223334 445432 22  444432333333322


Q ss_pred             CC--CCccEEEeCCCch---------------------------HHHHHHHhhccCCeEEEEcccc
Q 018404          233 FP--EGIDIYFEHVGGK---------------------------MLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      ..  +++|++|.+.|..                           ..+.+++.++++|++|.++...
T Consensus       120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~  185 (291)
T 3ijr_A          120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV  185 (291)
T ss_dssp             HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence            11  3699999987731                           1234445566789999998754

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.85  E-value=9.1e-05  Score=65.23  Aligned_cols=105  Identities=10%  Similarity=0.120  Sum_probs=69.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.++++.. .  ..|..+.+++.+.+.+.
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   74 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLL----------AEAVAALEAEAIAVVADVSDPKAVEAVFAEA   74 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHTCCSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhcCceEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999998776          5554355422 1  22444432333333332


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ..  +++|++|++.|..                          ..+.+++.++..|++|.++....
T Consensus        75 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  140 (263)
T 2a4k_A           75 LEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  140 (263)
T ss_dssp             HHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            11  3689999998831                          11233344433799999987544

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.85  E-value=3.4e-05  Score=68.73  Aligned_cols=109  Identities=17%  Similarity=0.229  Sum_probs=68.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.+.+..+.. .  ..|..+.+++.+.+.+.
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  105 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVL------DAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAV  105 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999988775      22223333111222 2  23444432333333322


Q ss_pred             CC--CCccEEEeCCCch---------------------------HHHHHHHhhcc----CCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK---------------------------MLDAVLLNMRL----HGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~---------------------------~~~~~~~~l~~----~G~~v~~g~~~~  270 (356)
                      ..  +++|++|++.|..                           ..+.+++.+..    +|++|.++....
T Consensus       106 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  176 (281)
T 4dry_A          106 RAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISA  176 (281)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGG
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHh
Confidence            11  3799999998841                           02344445543    589999987654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.84  E-value=8.6e-05  Score=65.65  Aligned_cols=83  Identities=17%  Similarity=0.338  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+..   ..+|..+.+++...+.+.
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~   99 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGA------EGIGAAFK-QAGLEGRGAVLNVNDATAVDALVEST   99 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHH------HHHHHHHH-HHTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEEeCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999987765      22233344 33432   223444432333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|++.|
T Consensus       100 ~~~~g~iD~lvnnAg  114 (270)
T 3ftp_A          100 LKEFGALNVLVNNAG  114 (270)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  36999999998

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.84  E-value=5.6e-05  Score=66.95  Aligned_cols=105  Identities=19%  Similarity=0.223  Sum_probs=69.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.          +.+.++++.. .  ..|..+.+++.+.+.+.
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDAL----------QETAAEIGDDALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHTSCCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhCCCeEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999998876          5444355432 2  22444432333333322


Q ss_pred             CC--CCccEEEeCCCch---------------------------HHHHHHHhhcc----CCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK---------------------------MLDAVLLNMRL----HGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~---------------------------~~~~~~~~l~~----~G~~v~~g~~~~  270 (356)
                      ..  +++|+++.+.|..                           ..+.+++.+..    +|++|.++....
T Consensus        97 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  167 (272)
T 4dyv_A           97 VEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA  167 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSST
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhh
Confidence            11  3799999998831                           02344455543    589999987654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.84  E-value=9.9e-05  Score=64.78  Aligned_cols=107  Identities=10%  Similarity=0.113  Sum_probs=70.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+.++.+...|++|++++++.++.       +..+.+. +.+..   ...|-.++++..+.+.+.
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~-------~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~v~~~   77 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG-------AFLDALA-QRQPRATYLPVELQDDAQCRDAVAQT   77 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH-------HHHHHHH-HHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH-------HHHHHHH-hcCCCEEEEEeecCCHHHHHHHHHHH
Confidence            488999999999999999999999999999999887654       1113344 33432   223444432333333322


Q ss_pred             CC--CCccEEEeCCCc----------h---------------HHHHHHHhhc-cCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGG----------K---------------MLDAVLLNMR-LHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~----------~---------------~~~~~~~~l~-~~G~~v~~g~~~~  270 (356)
                      ..  |++|+++++.|.          +               ..+.+++.|+ .+|++|.+++..+
T Consensus        78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  143 (258)
T 4gkb_A           78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA  143 (258)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred             HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence            21  479999999983          1               1244455554 4799999987654

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.83  E-value=6.3e-05  Score=70.14  Aligned_cols=102  Identities=19%  Similarity=0.175  Sum_probs=76.6

Q ss_pred             HHHHHHHHHc-CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCC
Q 018404          143 TAWAGFYEIC-APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE  221 (356)
Q Consensus       143 tA~~~l~~~~-~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~  221 (356)
                      ..+.++.+.. ..-.|++|+|.| .|.+|..+++.++.+|++|+++++++.+.          ..+. ..|.. +.    
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG-~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra----------~~A~-~~G~~-v~----  267 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCG-YGEVGKGCCAALKAMGSIVYVTEIDPICA----------LQAC-MDGFR-LV----  267 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTCE-EC----
T ss_pred             HHHHHHHHhhCceecCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEeCChhhh----------HHHH-HcCCE-ec----
Confidence            4455555443 345799999999 89999999999999999999999887665          4454 55642 11    


Q ss_pred             cccHHHHHHHhCCCCccEEEeCCCc-hHHH-HHHHhhccCCeEEEEccc
Q 018404          222 ENDLDAALKRCFPEGIDIYFEHVGG-KMLD-AVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       222 ~~~~~~~~~~~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~  268 (356)
                        ++.+.+.     ..|+|+.|.|. ..+. ..++.|++++.++.+|..
T Consensus       268 --~Leeal~-----~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg  309 (435)
T 3gvp_A          268 --KLNEVIR-----QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHS  309 (435)
T ss_dssp             --CHHHHTT-----TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSST
T ss_pred             --cHHHHHh-----cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCC
Confidence              3333333     48999999887 4454 889999999999999864

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.82  E-value=0.00013  Score=64.65  Aligned_cols=108  Identities=22%  Similarity=0.319  Sum_probs=69.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-CE--E--EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DD--A--FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~--v--v~~~~~~~~~~~~~  230 (356)
                      ++.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ ..+. ..  .  .|..+.+++...+.
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~  103 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI------EELAAECK-SAGYPGTLIPYRCDLSNEEDILSMFS  103 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCSSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHH------HHHHHHHH-hcCCCceEEEEEecCCCHHHHHHHHH
Confidence            468999999999999999999999999999999987765      22223344 3342 11  1  24444323333333


Q ss_pred             HhCC--CCccEEEeCCCch-----------H---------------HHHHHHhhcc----CCeEEEEccccc
Q 018404          231 RCFP--EGIDIYFEHVGGK-----------M---------------LDAVLLNMRL----HGRIAACGMISQ  270 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~~-----------~---------------~~~~~~~l~~----~G~~v~~g~~~~  270 (356)
                      +...  +++|++|.+.|..           .               .+.+++.+..    +|++|.++....
T Consensus       104 ~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~  175 (279)
T 1xg5_A          104 AIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSG  175 (279)
T ss_dssp             HHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGG
T ss_pred             HHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhh
Confidence            2211  3699999998831           0               3444555543    379999987654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.81  E-value=0.00015  Score=62.91  Aligned_cols=84  Identities=23%  Similarity=0.294  Sum_probs=57.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.++++.+...|++|+.++++.++.      +++.+.++ +.+...   ..|..+.+++.+.+.+.
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASA------EKFENSMK-EKGFKARGLVLNISDIESIQNFFAEI   76 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHH
Confidence            367999999999999999999999999999999988775      22333444 445431   22444432333333333


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|++|.+.|.
T Consensus        77 ~~~~~~id~li~~Ag~   92 (247)
T 3lyl_A           77 KAENLAIDILVNNAGI   92 (247)
T ss_dssp             HHTTCCCSEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence            2  2379999999883

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.81  E-value=0.00016  Score=64.15  Aligned_cols=107  Identities=21%  Similarity=0.241  Sum_probs=70.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCccc---HHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEEND---LDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~---~~~~~  229 (356)
                      .|++++|+||++++|.++++.+...|++|++++++.++.      +++.+.++ +.+...   ..|..+.+.   +.+.+
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGST------AAVQQRII-ASGGTAQELAGDLSEAGAGTDLIERA  104 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTT------HHHHHHHH-HTTCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH------HHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776      23333344 334321   123333312   33333


Q ss_pred             HHhCCCCccEEEeCCCc-----------h---------------HHHHHHHhh--ccCCeEEEEcccccc
Q 018404          230 KRCFPEGIDIYFEHVGG-----------K---------------MLDAVLLNM--RLHGRIAACGMISQY  271 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~g~~~~~  271 (356)
                      .+.  +++|+++.+.|.           +               ..+.++..+  ...|++|.++.....
T Consensus       105 ~~~--g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~  172 (275)
T 4imr_A          105 EAI--APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQL  172 (275)
T ss_dssp             HHH--SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHh--CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhC
Confidence            333  579999999983           0               123334444  346899999876543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.80  E-value=9.5e-05  Score=65.61  Aligned_cols=105  Identities=19%  Similarity=0.290  Sum_probs=70.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.          +.+.++++.. ..  .|..+.+.+.+.+.+.
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   73 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL----------DDLVAAYPDRAEAISLDVTDGERIDVVAADV   73 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG----------HHHHHHCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHhccCCceEEEeeCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999998887          5555355442 12  2444432333333332


Q ss_pred             CC--CCccEEEeCCCch-----------H---------------HHHHHHhhc--cCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK-----------M---------------LDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      ..  +++|++|.+.|..           .               .+.+++.++  ..|++|.+++...
T Consensus        74 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~  141 (281)
T 3m1a_A           74 LARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGG  141 (281)
T ss_dssp             HHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccc
Confidence            11  3699999998831           1               334444443  3589999987654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.79  E-value=0.00016  Score=64.28  Aligned_cols=84  Identities=15%  Similarity=0.193  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC---C-E--EEecCCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF---D-D--AFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~-~--vv~~~~~~~~~~~~  229 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+.   . .  ..|..+.+++.+.+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~~~~Dv~~~~~v~~~~   82 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKL------AGAVQELE-ALGANGGAIRYEPTDITNEDETARAV   82 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-TTCCSSCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-HhCCCCceEEEEeCCCCCHHHHHHHH
Confidence            478999999999999999999999999999999987765      22334444 4443   1 1  12444432333333


Q ss_pred             HHhCC--CCccEEEeCCCc
Q 018404          230 KRCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g~  246 (356)
                      .+...  +++|+++.+.|.
T Consensus        83 ~~~~~~~g~id~lv~nAg~  101 (281)
T 3svt_A           83 DAVTAWHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCc
Confidence            33221  369999999884

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.79  E-value=0.00014  Score=65.30  Aligned_cols=84  Identities=19%  Similarity=0.224  Sum_probs=54.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-C-E--EEecCCc-ccHHH--
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-D-D--AFNYKEE-NDLDA--  227 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~-~--vv~~~~~-~~~~~--  227 (356)
                      ..+.+|||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+. . .  .+|..+. .....  
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~~Dl~~~~~~v~~~~   82 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKG------HEAVEKLK-NSNHENVVFHQLDVTDPIATMSSLA   82 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-TTTCCSEEEEECCTTSCHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCCceEEEEccCCCcHHHHHHHH
Confidence            3578999999999999999999989999999999998775      22223344 3332 1 1  2244332 12222  


Q ss_pred             -HHHHhCCCCccEEEeCCCc
Q 018404          228 -ALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       228 -~~~~~~~~~~d~vid~~g~  246 (356)
                       .+.+.. +++|++|.+.|.
T Consensus        83 ~~~~~~~-g~iD~lv~nAg~  101 (311)
T 3o26_A           83 DFIKTHF-GKLDILVNNAGV  101 (311)
T ss_dssp             HHHHHHH-SSCCEEEECCCC
T ss_pred             HHHHHhC-CCCCEEEECCcc
Confidence             232222 379999999983

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.79  E-value=0.00012  Score=64.42  Aligned_cols=84  Identities=19%  Similarity=0.310  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.+.+..+...   ..|..+.+++.+.+.+.
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSEL------DAARRALGEQFGTDVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999987775      222233331244421   23444432333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|++.|
T Consensus        93 ~~~~g~id~lv~nAg  107 (266)
T 4egf_A           93 AEAFGGLDVLVNNAG  107 (266)
T ss_dssp             HHHHTSCSEEEEECC
T ss_pred             HHHcCCCCEEEECCC
Confidence            21  37999999988

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.78  E-value=0.0001  Score=65.11  Aligned_cols=107  Identities=15%  Similarity=0.188  Sum_probs=68.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-chhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-EKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      .+.++||+||+|++|.++++.+...|++|+++.+.. +..      +++.+.++ ..+...   ..|..+.+++.+.+.+
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~   98 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAA------EEVAGKIE-AAGGKALTAQADVSDPAAVRRLFAT   98 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            578999999999999999998888999999885443 333      22333444 444432   2244443233333332


Q ss_pred             hCC--CCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEcccc
Q 018404          232 CFP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      ...  +++|++|++.|..                          .++.+++.++++|++|.++...
T Consensus        99 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~  164 (267)
T 3u5t_A           99 AEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ  164 (267)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence            211  3799999999831                          1245556677789999998643

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.77  E-value=0.00014  Score=65.89  Aligned_cols=83  Identities=14%  Similarity=0.197  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--C---EEEecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--D---DAFNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~~~  230 (356)
                      .+.+|||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ ..+.  .   ..+|..+.+.+.+.+.
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~~~Dl~~~~~v~~~~~   79 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSI------DKALATLE-AEGSGPEVMGVQLDVASREGFKMAAD   79 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HHTCGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCCCeEEEEECCCCCHHHHHHHHH
Confidence            477999999999999999999999999999999998876      22223333 2332  1   1234444323333333


Q ss_pred             HhC--CCCccEEEeCCC
Q 018404          231 RCF--PEGIDIYFEHVG  245 (356)
Q Consensus       231 ~~~--~~~~d~vid~~g  245 (356)
                      +..  .+++|++|.+.|
T Consensus        80 ~~~~~~g~id~lv~nAg   96 (319)
T 3ioy_A           80 EVEARFGPVSILCNNAG   96 (319)
T ss_dssp             HHHHHTCCEEEEEECCC
T ss_pred             HHHHhCCCCCEEEECCC
Confidence            321  137999999998

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.76  E-value=0.00014  Score=63.77  Aligned_cols=108  Identities=15%  Similarity=0.195  Sum_probs=68.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS-AGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~  231 (356)
                      ++.++||+||+|++|.++++.+...|++|+++ .++.++.      +++.+.++ +.+... .  .|..+.+++.+.+.+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAA------LETAEEIE-KLGVKVLVVKANVGQPAKIKEMFQQ   75 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-TTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            57899999999999999999999999999987 6666654      22223344 444432 2  244443233333333


Q ss_pred             hCC--CCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      ...  +++|++|.+.|..                          ..+.+++.++.  .|++|.++....
T Consensus        76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~  144 (258)
T 3oid_A           76 IDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGS  144 (258)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGG
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence            211  3699999999720                          11334444544  579999987654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.75  E-value=0.00024  Score=62.46  Aligned_cols=109  Identities=15%  Similarity=0.133  Sum_probs=69.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--E--EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--D--AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~--vv~~~~~~~~~~~~~~  231 (356)
                      .+.++||+||++++|.++++.+...|++|++++++.++.      +++.+.+.+..+..  .  ..|..+.+++...+.+
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERL------RAAESALRQRFPGARLFASVCDVLDALQVRAFAEA   80 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999987765      22333344123332  1  1244443233333332


Q ss_pred             hCC--CCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      ...  +++|+++++.|..                          ..+.+++.+..  +|++|.++....
T Consensus        81 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  149 (265)
T 3lf2_A           81 CERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLA  149 (265)
T ss_dssp             HHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGG
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCccc
Confidence            211  3799999999831                          12344445543  589999887554

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.75  E-value=0.00019  Score=63.15  Aligned_cols=109  Identities=18%  Similarity=0.172  Sum_probs=67.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc-CCC-E--EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFD-D--AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~-~--vv~~~~~~~~~~~~~~  231 (356)
                      .+.+++|+||+|++|.+.++.+...|++|++++++.++.      +++.+.+.+.. +.. .  ..|..+.+++.+.+.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAG------VQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRK   79 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999987765      11112222111 111 1  1244443233333333


Q ss_pred             hCC--CCccEEEeCCCc---h---------------HHHHHHHhhcc-----CCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGG---K---------------MLDAVLLNMRL-----HGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~---~---------------~~~~~~~~l~~-----~G~~v~~g~~~~  270 (356)
                      ...  +++|++|++.|.   +               ..+.+++.+.+     .|++|.++....
T Consensus        80 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  143 (267)
T 2gdz_A           80 VVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  143 (267)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             HHHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc
Confidence            211  368999999983   1               12344555543     589999987654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.74  E-value=0.00012  Score=63.86  Aligned_cols=105  Identities=16%  Similarity=0.142  Sum_probs=68.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.          +.+.++++... .  .|..+.+++.+.+.+.
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   74 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG----------QQLAAELGERSMFVRHDVSSEADWTLVMAAV   74 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHHHHHCTTEEEECCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHcCCceEEEEccCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999987776          44443544321 1  2333332333333332


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhcc-CCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRL-HGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~-~G~~v~~g~~~~  270 (356)
                      ..  +++|++|++.|..                          ..+.+++.++. +|++|.++....
T Consensus        75 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (253)
T 1hxh_A           75 QRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             HHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhh
Confidence            11  3689999998831                          11234444533 489999987654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.74  E-value=0.0001  Score=64.85  Aligned_cols=109  Identities=16%  Similarity=0.171  Sum_probs=67.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||++++|.++++.+...|++|+++.++....   +.-+++.+.++ +.+...   ..|..+.+++...+.+.
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~---~~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDS---DTANKLKDELE-DQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGH---HHHHHHHHHHH-TTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCH---HHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999987654321   11122333344 334321   22444432333333322


Q ss_pred             CC--CCccEEEeCCCc-----------hH---------------HHHHHHhhccCCeEEEEccc
Q 018404          233 FP--EGIDIYFEHVGG-----------KM---------------LDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       233 ~~--~~~d~vid~~g~-----------~~---------------~~~~~~~l~~~G~~v~~g~~  268 (356)
                      ..  +++|+++++.|.           +.               .+.+++.|+++|++|.++..
T Consensus        86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            11  379999999982           11               13334445677999998764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.74  E-value=0.00012  Score=64.31  Aligned_cols=80  Identities=16%  Similarity=0.078  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhC-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCF-  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~-  233 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.         .+.++ +.+... ..|..+.+++.+.+.+.. 
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---------~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS---------VTELR-QAGAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHH---------HHHHH-HHTCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHH---------HHHHH-hcCCeEEECCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999987764         14444 556432 234444323333333221 


Q ss_pred             -CCCccEEEeCCC
Q 018404          234 -PEGIDIYFEHVG  245 (356)
Q Consensus       234 -~~~~d~vid~~g  245 (356)
                       .+++|++|.+.|
T Consensus        96 ~~g~iD~lv~nAg  108 (260)
T 3gem_A           96 QTSSLRAVVHNAS  108 (260)
T ss_dssp             HCSCCSEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence             137999999988

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.74  E-value=0.00017  Score=63.31  Aligned_cols=83  Identities=17%  Similarity=0.248  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+...   ..|..+.+++...+.+.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREAL------EKAEASVR-EKGVEARSYVCDVTSEEAVIGTVDSV   78 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-TTTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999987765      22223333 334321   12444432333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|++.|
T Consensus        79 ~~~~g~id~lv~nAg   93 (262)
T 1zem_A           79 VRDFGKIDFLFNNAG   93 (262)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHhCCCCEEEECCC
Confidence            11  36999999887

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.73  E-value=0.0001  Score=64.75  Aligned_cols=83  Identities=14%  Similarity=0.126  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKL-MGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~-~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~  231 (356)
                      ++.+|+|+||+|++|.++++.+.. .|++|++++++.++.      +++.+.++ ..+.. ..  .|..+.+++...+.+
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dl~~~~~~~~~~~~   75 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRG------QAAVQQLQ-AEGLSPRFHQLDIDDLQSIRALRDF   75 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHH------HHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHH------HHHHHHHH-hcCCeeEEEECCCCCHHHHHHHHHH
Confidence            568999999999999999988887 899999999987665      12223333 33432 22  343433233333332


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|++|.+.|
T Consensus        76 ~~~~~g~id~li~~Ag   91 (276)
T 1wma_A           76 LRKEYGGLDVLVNNAG   91 (276)
T ss_dssp             HHHHHSSEEEEEECCC
T ss_pred             HHHhcCCCCEEEECCc
Confidence            211  36999999987

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.73  E-value=0.00019  Score=63.68  Aligned_cols=84  Identities=12%  Similarity=0.246  Sum_probs=54.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-------------cchhccccchhHHHHHHHhhcCCCE---EEe
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-------------REKVWLIPMQSQLVELLKNKFGFDD---AFN  218 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-------------~~~~~~~~~~~~~~~~~~~~~g~~~---vv~  218 (356)
                      -.|+++||+||++++|.++++.+...|++|++++++             .++.      +++.+.++ +.+...   ..|
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~D   85 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDL------DETARLVE-DQGRKALTRVLD   85 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHH------HHHHHHHH-TTTCCEEEEECC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHH------HHHHHHHH-hcCCeEEEEEcC
Confidence            457899999999999999999999999999999873             3332      22333444 444432   234


Q ss_pred             cCCcccHHHHHHHhCC--CCccEEEeCCC
Q 018404          219 YKEENDLDAALKRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~--~~~d~vid~~g  245 (356)
                      ..+.+++.+.+.+...  +++|+++++.|
T Consensus        86 v~~~~~v~~~~~~~~~~~g~id~lvnnAg  114 (280)
T 3pgx_A           86 VRDDAALRELVADGMEQFGRLDVVVANAG  114 (280)
T ss_dssp             TTCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            4443233333332211  37999999988

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.73  E-value=0.00016  Score=62.80  Aligned_cols=83  Identities=24%  Similarity=0.372  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      .+.+++|+||+|++|.++++.+...|++|+++++ +.++.      +++.+.++ +.+...   ..|..+.+++.+.+.+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~   75 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKA------NEVVDEIK-KLGSDAIAVRADVANAEDVTNMVKQ   75 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            4679999999999999999999999999999998 65554      22223333 334321   2244443233333332


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|++|++.|
T Consensus        76 ~~~~~g~id~lv~nAg   91 (246)
T 2uvd_A           76 TVDVFGQVDILVNNAG   91 (246)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            211  36999999988

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.73  E-value=0.00021  Score=62.49  Aligned_cols=82  Identities=15%  Similarity=0.173  Sum_probs=54.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~~  233 (356)
                      +.+++|+||+|++|.++++.+...|++|++++++.++.      +++.+.++ ..+.. ..  .|..+.+++.+.+.+..
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~   74 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATA------KAVASEIN-QAGGHAVAVKVDVSDRDQVFAAVEQAR   74 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999987765      12223333 33432 12  24444323333333221


Q ss_pred             --CCCccEEEeCCC
Q 018404          234 --PEGIDIYFEHVG  245 (356)
Q Consensus       234 --~~~~d~vid~~g  245 (356)
                        -+++|++|++.|
T Consensus        75 ~~~g~id~lv~nAg   88 (256)
T 1geg_A           75 KTLGGFDVIVNNAG   88 (256)
T ss_dssp             HHTTCCCEEEECCC
T ss_pred             HHhCCCCEEEECCC
Confidence              137999999987

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.73  E-value=0.00011  Score=64.58  Aligned_cols=108  Identities=19%  Similarity=0.192  Sum_probs=67.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-cchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-REKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~  231 (356)
                      .|.++||+||++++|.++++.+...|++|+++.+. .+..      ++..+.++ +.+.. ..  .|..+.+++.+.+.+
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGA------ATAVAEIE-KLGRSALAIKADLTNAAEVEAAISA   79 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHH------HHHHHHHH-TTTSCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHH
Confidence            47899999999999999999999999999998544 3333      22223344 44432 22  244443233333333


Q ss_pred             hCC--CCccEEEeCCCch------------H---------------HHHHHHhhccCCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGGK------------M---------------LDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ...  +++|+++.+.|..            .               .+.+++.+.++|++|.++....
T Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~  147 (259)
T 3edm_A           80 AADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAG  147 (259)
T ss_dssp             HHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             HHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHh
Confidence            221  3799999988731            1               1233345556789999987543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.73  E-value=8.9e-05  Score=65.07  Aligned_cols=108  Identities=21%  Similarity=0.245  Sum_probs=68.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc--CCC-EE--EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF--GFD-DA--FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~-~v--v~~~~~~~~~~~~~  230 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.+. ..  +.. ..  .|..+.+.+.+.+.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKL------EAAASRIA-SLVSGAQVDIVAGDIREPGDIDRLFE   78 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HHSTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCCCeEEEEEccCCCHHHHHHHHH
Confidence            467999999999999999999989999999999987765      11222222 21  211 12  34444323333344


Q ss_pred             HhCCC-CccEEEeCCCch-----------H---------------HHHHHHhhc--cCCeEEEEccccc
Q 018404          231 RCFPE-GIDIYFEHVGGK-----------M---------------LDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       231 ~~~~~-~~d~vid~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      +.... ++|++|.+.|..           .               .+.+++.+.  ..|++|.++....
T Consensus        79 ~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  147 (260)
T 2z1n_A           79 KARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTL  147 (260)
T ss_dssp             HHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence            33222 499999998831           1               134444443  2489999987554

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.72  E-value=0.00018  Score=63.86  Aligned_cols=113  Identities=11%  Similarity=0.091  Sum_probs=68.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhc------cccchhHHHHHHHhhcCCCE---EEecCCcccHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW------LIPMQSQLVELLKNKFGFDD---AFNYKEENDLD  226 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~  226 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.....      .....+++...++ ..+...   .+|..+.+++.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE-KTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHH-HTTSCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHH-hcCCceEEEEccCCCHHHHH
Confidence            4789999999999999999999999999999987621100      0001122223333 444322   22444432333


Q ss_pred             HHHHHhCC--CCccEEEeCCCc---------hH---------------HHHHHHhhccCCeEEEEcccc
Q 018404          227 AALKRCFP--EGIDIYFEHVGG---------KM---------------LDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       227 ~~~~~~~~--~~~d~vid~~g~---------~~---------------~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      +.+.+...  +++|++|++.|.         +.               .+.++..+.++|++|.++...
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  156 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence            33333221  369999999884         11               133344556789999988743

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.71  E-value=0.00024  Score=61.95  Aligned_cols=110  Identities=15%  Similarity=0.136  Sum_probs=68.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC--CC-EEEec--CCcccHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG--FD-DAFNY--KEENDLDAAL  229 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~-~vv~~--~~~~~~~~~~  229 (356)
                      -.|.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.+.+..+  .. ..+|.  .+.++..+.+
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKL------RQVASHINEETGRQPQWFILDLLTCTSENCQQLA   83 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHhhcCCCceEEEEecccCCHHHHHHHH
Confidence            3578999999999999999999999999999999988775      222233331222  11 12333  3321222223


Q ss_pred             HHhC--CCCccEEEeCCCc-h--------------------------HHHHHHHhh--ccCCeEEEEccccc
Q 018404          230 KRCF--PEGIDIYFEHVGG-K--------------------------MLDAVLLNM--RLHGRIAACGMISQ  270 (356)
Q Consensus       230 ~~~~--~~~~d~vid~~g~-~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~  270 (356)
                      .+..  .+++|++|++.|. .                          ..+.+++.|  ...|++|.++....
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~  155 (252)
T 3f1l_A           84 QRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG  155 (252)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             HHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhh
Confidence            2221  2379999999883 1                          113344445  34589999987554

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.70  E-value=0.00028  Score=63.09  Aligned_cols=111  Identities=15%  Similarity=0.147  Sum_probs=69.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~~~  232 (356)
                      +|.++||+||+|++|.++++.+...|++|+++.++.+..    ..+++.+.++ +.+....   .|..+.+++.+.+.+.
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~  122 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEE----DAQQVKALIE-ECGRKAVLLPGDLSDESFARSLVHKA  122 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHH----HHHHHHHHHH-HTTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchh----HHHHHHHHHH-HcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999988763321    1122333444 5554322   2333331222223222


Q ss_pred             CC--CCccEEEeCCCc-h--------------------------HHHHHHHhhccCCeEEEEcccccc
Q 018404          233 FP--EGIDIYFEHVGG-K--------------------------MLDAVLLNMRLHGRIAACGMISQY  271 (356)
Q Consensus       233 ~~--~~~d~vid~~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~  271 (356)
                      ..  +++|+++.+.|. .                          ..+.++..++++|++|.++.....
T Consensus       123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~  190 (294)
T 3r3s_A          123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAY  190 (294)
T ss_dssp             HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGT
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhc
Confidence            11  379999998883 1                          113344456678999999876543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.69  E-value=0.00023  Score=61.95  Aligned_cols=77  Identities=18%  Similarity=0.326  Sum_probs=54.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHhCC-
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRCFP-  234 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~~~-  234 (356)
                      +++|+||+|++|.++++.+...|++|++++++.++.          +.+.++++.. .  ..|..+.+++.+.+.+... 
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   71 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL----------QELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE   71 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999988776          5444344432 1  2344443234444444332 


Q ss_pred             -CCccEEEeCCC
Q 018404          235 -EGIDIYFEHVG  245 (356)
Q Consensus       235 -~~~d~vid~~g  245 (356)
                       +++|++|++.|
T Consensus        72 ~g~iD~lvnnAg   83 (248)
T 3asu_A           72 WCNIDILVNNAG   83 (248)
T ss_dssp             TCCCCEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence             37999999887

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.69  E-value=0.00011  Score=64.48  Aligned_cols=105  Identities=17%  Similarity=0.163  Sum_probs=68.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.++++.. .  ..|..+.+++.+.+.+.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   75 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG----------KAMAAELADAARYVHLDVTQPAQWKAAVDTA   75 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhhcCceEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999988999999999987775          4443233321 1  22444432333333322


Q ss_pred             CC--CCccEEEeCCCch-----------HH---------------HHHHHhhc--cCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK-----------ML---------------DAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      ..  +++|++|++.|..           .+               +.+++.++  ..|++|.++....
T Consensus        76 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  143 (260)
T 1nff_A           76 VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG  143 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhh
Confidence            11  3699999998831           11               33444443  3589999987554

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.69  E-value=0.00026  Score=62.46  Aligned_cols=84  Identities=14%  Similarity=0.206  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.+++..+...|++|++++++.++.      +++.+.++ +.+.. ..  .|..+.+.+.+.+.+.
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dl~~~~~v~~~~~~~  102 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGL------EETAAKCK-GLGAKVHTFVVDCSNREDIYSSAKKV  102 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHH------HHHHHHHH-hcCCeEEEEEeeCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999987765      12223333 33432 12  2434332333333322


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|++|.+.|.
T Consensus       103 ~~~~g~iD~li~~Ag~  118 (272)
T 1yb1_A          103 KAEIGDVSILVNNAGV  118 (272)
T ss_dssp             HHHTCCCSEEEECCCC
T ss_pred             HHHCCCCcEEEECCCc
Confidence            1  1369999999883

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.68  E-value=0.00028  Score=61.27  Aligned_cols=102  Identities=20%  Similarity=0.263  Sum_probs=68.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++.++.        ..+.++ +.|...   ..|-.++ .   .+++.
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~--------~~~~~~-~~g~~~~~~~~Dv~d~-~---~v~~~   74 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDE--------TLDIIA-KDGGNASALLIDFADP-L---AAKDS   74 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--------HHHHHH-HTTCCEEEEECCTTST-T---TTTTS
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHH--------HHHHHH-HhCCcEEEEEccCCCH-H---HHHHH
Confidence            488999999999999999999999999999999875431        225566 666532   2233332 1   12222


Q ss_pred             C-CCCccEEEeCCCch--------------------------HHHHHHHhh-c--cCCeEEEEccccc
Q 018404          233 F-PEGIDIYFEHVGGK--------------------------MLDAVLLNM-R--LHGRIAACGMISQ  270 (356)
Q Consensus       233 ~-~~~~d~vid~~g~~--------------------------~~~~~~~~l-~--~~G~~v~~g~~~~  270 (356)
                      . .+++|+++++.|..                          ..+.+++.| +  ++|+||.+++..+
T Consensus        75 ~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~  142 (247)
T 4hp8_A           75 FTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS  142 (247)
T ss_dssp             STTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             HHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh
Confidence            2 24899999999831                          124445544 2  3699999998655

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.68  E-value=0.00029  Score=63.13  Aligned_cols=83  Identities=16%  Similarity=0.300  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC---C-E--EEecCCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF---D-D--AFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~-~--vv~~~~~~~~~~~~  229 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.+. +.+.   . .  ..|..+.+++.+.+
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~~~~Dv~d~~~v~~~~   97 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRL------EETKQQIL-KAGVPAEKINAVVADVTEASGQDDII   97 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCCCceEEEEecCCCCHHHHHHHH
Confidence            468999999999999999999999999999999987765      12223333 3332   1 1  12444432333333


Q ss_pred             HHhCC--CCccEEEeCCC
Q 018404          230 KRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g  245 (356)
                      .+...  +++|++|++.|
T Consensus        98 ~~~~~~~g~iD~lvnnAG  115 (297)
T 1xhl_A           98 NTTLAKFGKIDILVNNAG  115 (297)
T ss_dssp             HHHHHHHSCCCEEEECCC
T ss_pred             HHHHHhcCCCCEEEECCC
Confidence            32211  36999999988

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.68  E-value=0.00027  Score=62.61  Aligned_cols=84  Identities=13%  Similarity=0.200  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-------------cchhccccchhHHHHHHHhhcCCCE---EEec
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-------------REKVWLIPMQSQLVELLKNKFGFDD---AFNY  219 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-------------~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~  219 (356)
                      .|.++||+||++++|.++++.+...|++|++++++             .++.      ++..+.+. ..+...   ..|.
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~D~   82 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDL------SETVRLVE-AANRRIVAAVVDT   82 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHH------HHHHHHHH-HTTCCEEEEECCT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHH------HHHHHHHH-hcCCeEEEEECCC
Confidence            47899999999999999999999999999999873             2222      22223333 334322   2244


Q ss_pred             CCcccHHHHHHHhCC--CCccEEEeCCCc
Q 018404          220 KEENDLDAALKRCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~--~~~d~vid~~g~  246 (356)
                      .+.+++.+.+.+...  +++|++|++.|.
T Consensus        83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           83 RDFDRLRKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            443233333333221  369999999883

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.68  E-value=0.00021  Score=62.20  Aligned_cols=80  Identities=13%  Similarity=0.212  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-chhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-EKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++. ++.         .+.++ +.+...   ..|..+.+++.+.+.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEA---------EAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQ   75 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH---------HHHHH-HTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHH---------HHHHH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence            467999999999999999999999999999999887 554         12344 555421   2244443233333332


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|++|++.|
T Consensus        76 ~~~~~g~id~lv~nAg   91 (249)
T 2ew8_A           76 VISTFGRCDILVNNAG   91 (249)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            211  36999999988

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.68  E-value=0.00028  Score=64.71  Aligned_cols=114  Identities=18%  Similarity=0.226  Sum_probs=71.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhcc-ccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWL-IPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      .|.++||+||++++|.++++.+...|++|++++++.++... ...-.++.+.++ +.|...   .+|..+.+++.+.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHH
Confidence            47899999999999999999999999999999998775210 001122334455 555421   2344443233333333


Q ss_pred             hCC--CCccEEEeCCCc-----------h---------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGG-----------K---------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      ...  +++|++|++.|.           +               ..+.++..|+.  .|+||.++....
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~  191 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLN  191 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHH
Confidence            221  379999999983           1               12344455544  489999987543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.67  E-value=0.00029  Score=62.14  Aligned_cols=84  Identities=15%  Similarity=0.222  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-cchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-REKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      .+.++||+||+|++|.++++.+...|++|+++++. .+..      +++.+.++ +.+...   ..|..+.+++.+.+.+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~D~~d~~~v~~~~~~   99 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAA------DEVVAAIA-AAGGEAFAVKADVSQESEVEALFAA   99 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHH------HHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            47899999999999999999999999999998884 3333      22334444 444432   2244443233333332


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|++|.+.|.
T Consensus       100 ~~~~~g~id~lv~nAg~  116 (269)
T 4dmm_A          100 VIERWGRLDVLVNNAGI  116 (269)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            211  379999999883

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.67  E-value=0.0002  Score=62.94  Aligned_cols=108  Identities=11%  Similarity=0.085  Sum_probs=67.9

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-C-E--EEecCCcccHHHHH
Q 018404          156 KGEYIYVSAASG--AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-D-D--AFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g--~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~-~--vv~~~~~~~~~~~~  229 (356)
                      .+.++||+||+|  |+|.++++.+...|++|+++.++....      +.+.+... +.+. . .  ..|..+.+++.+.+
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~   78 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLE------KSVHELAG-TLDRNDSIILPCDVTNDAEIETCF   78 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH------HHHHHHHH-TSSSCCCEEEECCCSSSHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH------HHHHHHHH-hcCCCCceEEeCCCCCHHHHHHHH
Confidence            478999999994  599999999889999999999875443      12222233 4443 1 2  23444432333333


Q ss_pred             HHhCC--CCccEEEeCCCch------------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          230 KRCFP--EGIDIYFEHVGGK------------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      .+...  +++|+++.+.|..                              ..+.++..++++|++|.++....
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  151 (266)
T 3oig_A           79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG  151 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence            33221  3699999988731                              11334445566899999987554

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.67  E-value=0.00032  Score=62.24  Aligned_cols=85  Identities=14%  Similarity=0.139  Sum_probs=55.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALK  230 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~  230 (356)
                      ..+.++||+||+|++|.++++.+...|++|+++++ +.++.      +++.+.+. ..+...   ..|..+.+++.+.+.
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~   99 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGV------APVIAELS-GLGARVIFLRADLADLSSHQATVD   99 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHH------HHHHHHHH-HTTCCEEEEECCTTSGGGHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHH------HHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHH
Confidence            35789999999999999999999999999999985 44443      22223444 444421   224444324443333


Q ss_pred             HhCC--CCccEEEeCCCc
Q 018404          231 RCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~  246 (356)
                      +...  +++|++|.+.|.
T Consensus       100 ~~~~~~g~iD~lvnnAg~  117 (280)
T 4da9_A          100 AVVAEFGRIDCLVNNAGI  117 (280)
T ss_dssp             HHHHHHSCCCEEEEECC-
T ss_pred             HHHHHcCCCCEEEECCCc
Confidence            3221  369999999885

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.66  E-value=0.00026  Score=62.67  Aligned_cols=114  Identities=14%  Similarity=0.165  Sum_probs=68.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh------ccccchhHHHHHHHhhcCCCE---EEecCCcccHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV------WLIPMQSQLVELLKNKFGFDD---AFNYKEENDLD  226 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~  226 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++....      ...+..++..+.++ ..+...   ..|..+.+++.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE-DIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHH-HHTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHH-hcCCeEEEEeCCCCCHHHHH
Confidence            478999999999999999999999999999998762100      00011122223333 444432   22444432333


Q ss_pred             HHHHHhCC--CCccEEEeCCCch----------------------HHHHHHHhhcc---CCeEEEEccccc
Q 018404          227 AALKRCFP--EGIDIYFEHVGGK----------------------MLDAVLLNMRL---HGRIAACGMISQ  270 (356)
Q Consensus       227 ~~~~~~~~--~~~d~vid~~g~~----------------------~~~~~~~~l~~---~G~~v~~g~~~~  270 (356)
                      +.+.+...  +++|++|.+.|..                      ..+.+++.+.+   +|++|.++....
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  161 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG  161 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence            33333211  3799999998831                      12334444433   689999987554

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.66  E-value=0.00022  Score=62.26  Aligned_cols=98  Identities=15%  Similarity=0.137  Sum_probs=67.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC--
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP--  234 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~--  234 (356)
                      +.+|||+||+|++|.++++.+...|++|++++++.++.          +..  .    ..++..+.+++...+.+...  
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~----------~~~--~----~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN----------ADH--S----FTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SSE--E----EECSCSSHHHHHHHHHHHHTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccc--c----eEEEeCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999999999987764          210  1    12233332234444444322  


Q ss_pred             CCccEEEeCCCc--------h-------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          235 EGIDIYFEHVGG--------K-------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       235 ~~~d~vid~~g~--------~-------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      +++|++|.+.|.        +                   ..+.++..++++|++|.++....
T Consensus        86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (251)
T 3orf_A           86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA  148 (251)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence            379999999882        0                   12344556667899999987554

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.66  E-value=0.00016  Score=63.17  Aligned_cols=81  Identities=17%  Similarity=0.223  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCccc---HHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEEND---LDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~---~~~~~  229 (356)
                      ++.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+.. .  ..|..+.++   +.+.+
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL------APLVAEIE-AAGGRIVARSLDARNEDEVTAFLNAA   78 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGG------HHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEECcCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988876      23333444 33432 1  224444322   23333


Q ss_pred             HHhCCCCccEEEeCCC
Q 018404          230 KRCFPEGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g  245 (356)
                      .+.  +++|++|.+.|
T Consensus        79 ~~~--g~id~lv~nAg   92 (252)
T 3h7a_A           79 DAH--APLEVTIFNVG   92 (252)
T ss_dssp             HHH--SCEEEEEECCC
T ss_pred             Hhh--CCceEEEECCC
Confidence            333  57999999998

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.66  E-value=0.00021  Score=63.97  Aligned_cols=108  Identities=12%  Similarity=0.050  Sum_probs=69.0

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASG--AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g--~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~~  231 (356)
                      .+.++||+||+|  ++|.++++.+...|++|++++++++..      +++.+... +.+....  .|..+.+++.+.+.+
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~  101 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFK------KRVDPLAE-SLGVKLTVPCDVSDAESVDNMFKV  101 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH------HHHHHHHH-HHTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHH------HHHHHHHH-hcCCeEEEEcCCCCHHHHHHHHHH
Confidence            478999999987  999999999989999999999886543      12222333 4443322  344443233333333


Q ss_pred             hCC--CCccEEEeCCCch---------------H---------------HHHHHHhhccCCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGGK---------------M---------------LDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ...  +++|++|++.|..               .               .+.++..+.++|++|.++....
T Consensus       102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~  172 (296)
T 3k31_A          102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA  172 (296)
T ss_dssp             HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence            221  3799999998841               1               1233335566899999987554

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.66  E-value=0.00016  Score=64.16  Aligned_cols=84  Identities=18%  Similarity=0.214  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+.. ..  .|..+.+++.+.+.+.
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~  103 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDAL------QVVADEIA-GVGGKALPIRCDVTQPDQVRGMLDQM  103 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGG------HHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776      23334444 34432 22  3444432333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|++.|.
T Consensus       104 ~~~~g~iD~lvnnAg~  119 (276)
T 3r1i_A          104 TGELGGIDIAVCNAGI  119 (276)
T ss_dssp             HHHHSCCSEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence            21  369999999883

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.66  E-value=0.00027  Score=61.95  Aligned_cols=84  Identities=14%  Similarity=0.205  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch-hccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK-VWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++.++ .      +++.+.+.+..+... .  .|..+.+++.+.+.+
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   76 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEI------EKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDN   76 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHH------HHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHH------HHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHH
Confidence            46799999999999999999999999999999988765 4      122223331114321 1  244443233333332


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|++|++.|
T Consensus        77 ~~~~~g~iD~lv~~Ag   92 (260)
T 1x1t_A           77 AVRQMGRIDILVNNAG   92 (260)
T ss_dssp             HHHHHSCCSEEEECCC
T ss_pred             HHHhcCCCCEEEECCC
Confidence            211  36999999988

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.65  E-value=0.00014  Score=64.94  Aligned_cols=78  Identities=12%  Similarity=0.212  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      +|.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.++++.. .  .+|..+.+++.+.+.+.
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG----------EAAARTMAGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHTTSSSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc
Confidence            578999999999999999999999999999999998887          6655355432 1  22444432333334433


Q ss_pred             CCCCccEEEeCCC
Q 018404          233 FPEGIDIYFEHVG  245 (356)
Q Consensus       233 ~~~~~d~vid~~g  245 (356)
                        +++|++|.+.|
T Consensus        85 --~~iD~lv~nAg   95 (291)
T 3rd5_A           85 --SGADVLINNAG   95 (291)
T ss_dssp             --CCEEEEEECCC
T ss_pred             --CCCCEEEECCc
Confidence              47999999988

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.65  E-value=0.00021  Score=63.27  Aligned_cols=81  Identities=15%  Similarity=0.262  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc---C---CC-E--EEecCCcccHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF---G---FD-D--AFNYKEENDLD  226 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~---g---~~-~--vv~~~~~~~~~  226 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.+++   +   .. .  ..|..+.+++.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   74 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERL----------EETRQQILAAGVSEQNVNSVVADVTTDAGQD   74 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHHHTTCCGGGEEEEECCTTSHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHHHhcccCCCceeEEecccCCHHHHH
Confidence            467999999999999999999888999999999987765          3332232   2   11 1  12444432333


Q ss_pred             HHHHHhCC--CCccEEEeCCCc
Q 018404          227 AALKRCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       227 ~~~~~~~~--~~~d~vid~~g~  246 (356)
                      +.+.+...  +++|++|++.|.
T Consensus        75 ~~~~~~~~~~g~id~lv~~Ag~   96 (278)
T 1spx_A           75 EILSTTLGKFGKLDILVNNAGA   96 (278)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC-
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            33332211  369999999884

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.65  E-value=0.00031  Score=61.61  Aligned_cols=80  Identities=15%  Similarity=0.197  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC--CC-EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG--FD-DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~-~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.          +.+.+++.  .. ...|..+.+++.+.+.+.
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~   80 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAA----------QAVVAGLENGGFAVEVDVTKRASVDAAMQKA   80 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHTCTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHHhcCCeEEEEeCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999987776          44442443  21 123444432333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|++.|
T Consensus        81 ~~~~g~iD~lv~~Ag   95 (263)
T 3ak4_A           81 IDALGGFDLLCANAG   95 (263)
T ss_dssp             HHHHTCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  36999999988

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.64  E-value=0.00055  Score=59.93  Aligned_cols=83  Identities=12%  Similarity=0.166  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ ..+.. .  ..|..+.+++...+.+.
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTL------RVVAQEAQ-SLGGQCVPVVCDSSQESEVRSLFEQV   76 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HHSSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-HcCCceEEEECCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999987765      12223333 33432 1  12444432333333332


Q ss_pred             ---CCCCccEEEeCCC
Q 018404          233 ---FPEGIDIYFEHVG  245 (356)
Q Consensus       233 ---~~~~~d~vid~~g  245 (356)
                         ..+++|++|++.|
T Consensus        77 ~~~~~g~id~lvnnAg   92 (260)
T 2qq5_A           77 DREQQGRLDVLVNNAY   92 (260)
T ss_dssp             HHHHTTCCCEEEECCC
T ss_pred             HHhcCCCceEEEECCc
Confidence               1347999999994

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.64  E-value=0.00029  Score=63.06  Aligned_cols=109  Identities=12%  Similarity=0.063  Sum_probs=69.3

Q ss_pred             CCCCEEEEecCCch--HHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHH
Q 018404          155 KKGEYIYVSAASGA--VGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALK  230 (356)
Q Consensus       155 ~~g~~VlI~ga~g~--vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~  230 (356)
                      -.|+++||+||+|+  +|.++++.+...|++|+++.++++..      +.+.+... +.+....  .|..+.+++.+.+.
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~  101 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK------KRVEPLAE-ELGAFVAGHCDVADAASIDAVFE  101 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH------HHHHHHHH-HHTCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH------HHHHHHHH-hcCCceEEECCCCCHHHHHHHHH
Confidence            45789999999955  99999999999999999999885432      11122222 4443222  24444323333333


Q ss_pred             HhC--CCCccEEEeCCCch------------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          231 RCF--PEGIDIYFEHVGGK------------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       231 ~~~--~~~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      +..  .+++|++|++.|..                              ..+.+++.++++|++|.++....
T Consensus       102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A          102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            221  13799999998841                              12345556677899999987554

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.64  E-value=0.00033  Score=60.17  Aligned_cols=104  Identities=14%  Similarity=0.161  Sum_probs=67.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHHHhCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKRCFP  234 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~~~~~  234 (356)
                      +.+|+|+||+|++|.++++.+...|++|++++++.++.          +.+.++++-...  .|..+.+++.+.+.+...
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRL----------QALAAELEGALPLPGDVREEGDWARAVAAMEE   74 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHSTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhhhceEEEecCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999987776          544424432122  244443233333332211


Q ss_pred             --CCccEEEeCCCch-----------H---------------HHHHHHhhcc--CCeEEEEccccc
Q 018404          235 --EGIDIYFEHVGGK-----------M---------------LDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       235 --~~~d~vid~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                        +++|++|.+.|..           .               .+.+++.+..  .|+++.++....
T Consensus        75 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  140 (234)
T 2ehd_A           75 AFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAG  140 (234)
T ss_dssp             HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTT
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchh
Confidence              3699999998831           1               1244444543  589999987544

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.63  E-value=0.00033  Score=60.78  Aligned_cols=80  Identities=10%  Similarity=0.123  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--C-EE--EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--D-DA--FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~-~v--v~~~~~~~~~~~~~  230 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.+++..  . ..  .|..+.+.+.+.+.
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVG----------EKAAKSVGTPDQIQFFQHDSSDEDGWTKLFD   74 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhhccCceEEEECCCCCHHHHHHHHH
Confidence            467999999999999999999999999999999987765          433323321  1 12  24444323333333


Q ss_pred             HhCC--CCccEEEeCCC
Q 018404          231 RCFP--EGIDIYFEHVG  245 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g  245 (356)
                      +...  +++|++|.+.|
T Consensus        75 ~~~~~~~~id~li~~Ag   91 (251)
T 1zk4_A           75 ATEKAFGPVSTLVNNAG   91 (251)
T ss_dssp             HHHHHHSSCCEEEECCC
T ss_pred             HHHHHhCCCCEEEECCC
Confidence            3211  36999999988

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.62  E-value=8.8e-05  Score=64.63  Aligned_cols=80  Identities=18%  Similarity=0.227  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~~~  232 (356)
                      .|+++||+||+|++|.++++.+...|++|++++++.++.          +.+.++++....   .|..+.+++.+.+.+.
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   74 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGA----------KAAAASIGKKARAIAADISDPGSVKALFAEI   74 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHHHHHCTTEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776          544435554321   2333332333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|+++++.|
T Consensus        75 ~~~~g~id~lv~nAg   89 (247)
T 3rwb_A           75 QALTGGIDILVNNAS   89 (247)
T ss_dssp             HHHHSCCSEEEECCC
T ss_pred             HHHCCCCCEEEECCC
Confidence            11  36999999998

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.62  E-value=0.00027  Score=56.78  Aligned_cols=93  Identities=22%  Similarity=0.248  Sum_probs=60.9

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR  231 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  231 (356)
                      ..-.++.+|+|.| .|.+|..+++.++..|.+|+++++++++.          +.++++.|.. ++..+.. + .+.+.+
T Consensus        14 ~~~~~~~~v~IiG-~G~iG~~la~~L~~~g~~V~vid~~~~~~----------~~~~~~~g~~-~~~~d~~-~-~~~l~~   79 (155)
T 2g1u_A           14 SKKQKSKYIVIFG-CGRLGSLIANLASSSGHSVVVVDKNEYAF----------HRLNSEFSGF-TVVGDAA-E-FETLKE   79 (155)
T ss_dssp             ---CCCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGG----------GGSCTTCCSE-EEESCTT-S-HHHHHT
T ss_pred             hcccCCCcEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHH----------HHHHhcCCCc-EEEecCC-C-HHHHHH
Confidence            3446678999999 79999999999999999999999998886          5443234543 3332221 2 223433


Q ss_pred             hCCCCccEEEeCCCch-HHHHHHHhhcc
Q 018404          232 CFPEGIDIYFEHVGGK-MLDAVLLNMRL  258 (356)
Q Consensus       232 ~~~~~~d~vid~~g~~-~~~~~~~~l~~  258 (356)
                      ..-.++|+||.|++.. ....+...++.
T Consensus        80 ~~~~~ad~Vi~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           80 CGMEKADMVFAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             TTGGGCSEEEECSSCHHHHHHHHHHHHH
T ss_pred             cCcccCCEEEEEeCCcHHHHHHHHHHHH
Confidence            2112799999999984 33344444443

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.61  E-value=0.00035  Score=65.30  Aligned_cols=102  Identities=20%  Similarity=0.121  Sum_probs=75.6

Q ss_pred             HHHHHHHHH-cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCC
Q 018404          143 TAWAGFYEI-CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE  221 (356)
Q Consensus       143 tA~~~l~~~-~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~  221 (356)
                      ..+.++.+. ...-.|++|+|.| .|.+|..+++.++.+|++|+++.+++.+.          ..+. ..|.. ++    
T Consensus       232 slvdgI~Ratg~~L~GKTVgVIG-~G~IGr~vA~~lrafGa~Viv~d~dp~~a----------~~A~-~~G~~-vv----  294 (464)
T 3n58_A          232 SLVDGIRRGTDVMMAGKVAVVCG-YGDVGKGSAQSLAGAGARVKVTEVDPICA----------LQAA-MDGFE-VV----  294 (464)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHH----------HHHH-HTTCE-EC----
T ss_pred             HHHHHHHHhcCCcccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCcchh----------hHHH-hcCce-ec----
Confidence            344455443 3356799999999 89999999999999999999998876654          4444 45653 21    


Q ss_pred             cccHHHHHHHhCCCCccEEEeCCCch-HH-HHHHHhhccCCeEEEEccc
Q 018404          222 ENDLDAALKRCFPEGIDIYFEHVGGK-ML-DAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       222 ~~~~~~~~~~~~~~~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~  268 (356)
                        ++.+.+.     ..|+|+.+.|.. .+ ...+..|++++.++.+|..
T Consensus       295 --~LeElL~-----~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRg  336 (464)
T 3n58_A          295 --TLDDAAS-----TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHF  336 (464)
T ss_dssp             --CHHHHGG-----GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSS
T ss_pred             --cHHHHHh-----hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCC
Confidence              3433443     389999999874 43 6889999999999999863

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.61  E-value=0.00029  Score=62.03  Aligned_cols=108  Identities=22%  Similarity=0.314  Sum_probs=67.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~  231 (356)
                      ++.+|+|+||+|++|.++++.+...|++|+++++ +.++.      +++.+.++ +.+... .  .|..+.+.+.+.+.+
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~------~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~   92 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAA------EEVVAELK-KLGAQGVAIQADISKPSEVVALFDK   92 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHH------HHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHH
Confidence            4679999999999999999999999999999998 55443      12223333 345431 2  244443233333332


Q ss_pred             hCC--CCccEEEeCCCch-----------HH---------------HHHHHhhccCCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGGK-----------ML---------------DAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      ...  +++|++|.+.|..           .+               +.+++.++++|++|.++....
T Consensus        93 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~  159 (274)
T 1ja9_A           93 AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAA  159 (274)
T ss_dssp             HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHh
Confidence            211  3699999988731           11               222344444689999987544

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.61  E-value=0.00045  Score=61.04  Aligned_cols=89  Identities=20%  Similarity=0.218  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccc-cchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLI-PMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~  231 (356)
                      .|++++|+||++++|.++++.+...|++|+.++++.++.... ..-++..+.++ ..+..   ...|..+.+++.+.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN-AAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHH-HHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHH-hcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999987642000 01122233344 34432   12344443233333333


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|+++++.|
T Consensus        84 ~~~~~g~iD~lvnnAG   99 (274)
T 3e03_A           84 TVDTFGGIDILVNNAS   99 (274)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            221  37999999998

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.61  E-value=0.00036  Score=62.21  Aligned_cols=109  Identities=17%  Similarity=0.233  Sum_probs=70.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCcchhccccchhHHHHHHHhhc-CCC---EEEecCCcccHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC---YVVGSAGSREKVWLIPMQSQLVELLKNKF-GFD---DAFNYKEENDLDAA  228 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~---~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~---~vv~~~~~~~~~~~  228 (356)
                      .|.++||+||+|++|.++++.+...|+   +|+.++++.++.      +++.+.++... +..   ...|..+.+++.+.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~  105 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL------EELKKTIDQEFPNAKVHVAQLDITQAEKIKPF  105 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHH------HHHHHHHHHHCTTCEEEEEECCTTCGGGHHHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHH------HHHHHHHHhhCCCCeEEEEECCCCCHHHHHHH
Confidence            368999999999999999887777776   999999998776      22333333121 321   12344454355555


Q ss_pred             HHHhCC--CCccEEEeCCCc-h-----------H---------------HHHHHHhh--ccCCeEEEEccccc
Q 018404          229 LKRCFP--EGIDIYFEHVGG-K-----------M---------------LDAVLLNM--RLHGRIAACGMISQ  270 (356)
Q Consensus       229 ~~~~~~--~~~d~vid~~g~-~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~~  270 (356)
                      +.+...  +++|++|++.|. .           .               .+.++..|  ...|++|.++....
T Consensus       106 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~  178 (287)
T 3rku_A          106 IENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAG  178 (287)
T ss_dssp             HHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhh
Confidence            554433  379999999883 1           1               13334444  34699999987654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.60  E-value=0.00013  Score=63.86  Aligned_cols=80  Identities=21%  Similarity=0.303  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||++++|.++++.+...|++|++++++.++.          +.+.++++...   ..|..+.+++.+.+.+.
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGA----------ERVAGEIGDAALAVAADISKEADVDAAVEAA   77 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHCTTEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH----------HHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999998876          55553555431   22434432333333332


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        78 ~~~~g~id~li~~Ag   92 (261)
T 3n74_A           78 LSKFGKVDILVNNAG   92 (261)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHhcCCCCEEEECCc
Confidence            11  36999999987

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.60  E-value=0.00039  Score=60.76  Aligned_cols=83  Identities=17%  Similarity=0.239  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~  231 (356)
                      ++.+|||+||+|++|.++++.+...|++|+++++ +.++.      +++.+.++ +.+.. ..  .|..+.+++.+.+.+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~   78 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEA------NSVLEEIK-KVGGEAIAVKGDVTVESDVINLVQS   78 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-HTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHH------HHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHH
Confidence            4679999999999999999988889999999998 65544      12223333 33432 12  233333233333333


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|++|.+.|
T Consensus        79 ~~~~~g~id~li~~Ag   94 (261)
T 1gee_A           79 AIKEFGKLDVMINNAG   94 (261)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            211  36999999987

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.60  E-value=0.00031  Score=61.46  Aligned_cols=83  Identities=11%  Similarity=0.229  Sum_probs=53.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch--hccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK--VWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKR  231 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~  231 (356)
                      +.+++|+||+|++|.++++.+...|++|++++++.++  .      +++.+.++ ..+.. ..  .|..+.+++.+.+.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   74 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQA------AETIKLIE-AADQKAVFVGLDVTDKANFDSAIDE   74 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHH------HHHHHHHH-TTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHH
Confidence            5789999999999999999888889999999988765  3      12223333 33432 11  244443233333332


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|++|++.|.
T Consensus        75 ~~~~~g~iD~lv~nAg~   91 (258)
T 3a28_C           75 AAEKLGGFDVLVNNAGI   91 (258)
T ss_dssp             HHHHHTCCCEEEECCCC
T ss_pred             HHHHhCCCCEEEECCCC
Confidence            211  369999999883

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.59  E-value=0.00017  Score=64.10  Aligned_cols=85  Identities=22%  Similarity=0.315  Sum_probs=55.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      ..+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+...   ..|..+.+++.+.+.+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dv~d~~~v~~~~~~   94 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNV------SAAVDGLR-AAGHDVDGSSCDVTSTDEVHAAVAA   94 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-TTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            3578999999999999999999889999999999988775      22233344 344432   2244443233333333


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|++|.+.|.
T Consensus        95 ~~~~~g~id~lv~nAg~  111 (279)
T 3sju_A           95 AVERFGPIGILVNSAGR  111 (279)
T ss_dssp             HHHHHCSCCEEEECCCC
T ss_pred             HHHHcCCCcEEEECCCC
Confidence            211  379999999883

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.59  E-value=0.00036  Score=59.98  Aligned_cols=99  Identities=18%  Similarity=0.169  Sum_probs=67.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .+.+|+|+||+|++|..+++.+...|++|++++++.++.          +.+. ..+...++..    |+.+.+.+... 
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~----------~~~~-~~~~~~~~~~----Dl~~~~~~~~~-   83 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG----------PELR-ERGASDIVVA----NLEEDFSHAFA-   83 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH----------HHHH-HTTCSEEEEC----CTTSCCGGGGT-
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH----------HHHH-hCCCceEEEc----ccHHHHHHHHc-
Confidence            367999999999999999999999999999999998887          6666 5565123322    11122333322 


Q ss_pred             CccEEEeCCCch--------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          236 GIDIYFEHVGGK--------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       236 ~~d~vid~~g~~--------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      ++|+||.+.|..              ....+++.++.  .+++|.++..+.
T Consensus        84 ~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           84 SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence            699999999852              11233333332  378999887543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.58  E-value=0.00011  Score=63.56  Aligned_cols=80  Identities=14%  Similarity=0.086  Sum_probs=54.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~  233 (356)
                      +.++||+||+|++|.+++..+...|++|++++++.++.          +.+.++++..   ...|..+.+++.+.+.+..
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   72 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRL----------QQQELLLGNAVIGIVADLAHHEDVDVAFAAAV   72 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999998876          4444243321   1234444323333333221


Q ss_pred             C--CCccEEEeCCCc
Q 018404          234 P--EGIDIYFEHVGG  246 (356)
Q Consensus       234 ~--~~~d~vid~~g~  246 (356)
                      .  +++|+++.+.|.
T Consensus        73 ~~~g~id~lvnnAg~   87 (235)
T 3l6e_A           73 EWGGLPELVLHCAGT   87 (235)
T ss_dssp             HHHCSCSEEEEECCC
T ss_pred             HhcCCCcEEEECCCC
Confidence            1  379999999884

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.58  E-value=0.00012  Score=64.17  Aligned_cols=83  Identities=16%  Similarity=0.234  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+.. .  ..|..+.+++.+.+.+.
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~   77 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKL------EEAKLEIE-QFPGQILTVQMDVRNTDDIQKMIEQI   77 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHC-CSTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999998876      12222222 23322 1  22444432333333332


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        78 ~~~~g~id~lv~nAg   92 (257)
T 3imf_A           78 DEKFGRIDILINNAA   92 (257)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  37999999998

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.57  E-value=0.00026  Score=62.17  Aligned_cols=100  Identities=16%  Similarity=0.254  Sum_probs=65.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH---HHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL---DAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~---~~~~~~~  232 (356)
                      +|+++||+||++|+|++.++.+...|++|+.+.+++++.           ..+ .+  ....|-.+.++.   .+.+.+.
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~-~~--~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------LPE-EL--FVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------SCT-TT--EEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------CCc-EE--EEEcCCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999876542           001 11  122344443222   2333333


Q ss_pred             CCCCccEEEeCCCc-h---------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          233 FPEGIDIYFEHVGG-K---------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~~~~d~vid~~g~-~---------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      . |++|+++++.|. .                           ..+.+++.|.  .+|++|.++...+
T Consensus        76 ~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~  142 (261)
T 4h15_A           76 L-GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQR  142 (261)
T ss_dssp             T-SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             c-CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhh
Confidence            2 369999998772 0                           1134444553  3689999987654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.57  E-value=0.00018  Score=62.97  Aligned_cols=109  Identities=17%  Similarity=0.228  Sum_probs=70.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+...   ..|..+.+++.+.+.+.
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~   83 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGA------EAVAAAIR-QAGGKAIGLECNVTDEQHREAVIKAA   83 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            478999999999999999998888999999999987765      22333444 444432   22444432333333322


Q ss_pred             CC--CCccEEEeCCCch-------------------------HHHHHHHhhcc--CCeEEEEcccccc
Q 018404          233 FP--EGIDIYFEHVGGK-------------------------MLDAVLLNMRL--HGRIAACGMISQY  271 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~~  271 (356)
                      ..  +++|+++++.|..                         ..+.+++.+.+  +|++|.++.....
T Consensus        84 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  151 (256)
T 3gaf_A           84 LDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGE  151 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred             HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHc
Confidence            11  3699999998831                         11333444433  5899999876543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.57  E-value=0.00051  Score=62.14  Aligned_cols=90  Identities=18%  Similarity=0.207  Sum_probs=54.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhc------cccchhHHHHHHHhhcCCCE---EEecCCcccH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW------LIPMQSQLVELLKNKFGFDD---AFNYKEENDL  225 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~  225 (356)
                      -.|.++||+||+|++|.++++.+...|++|++++++.....      ..+..++..+.++ +.+...   ..|..+.+++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE-EQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHH-hcCCeEEEEECCCCCHHHH
Confidence            35789999999999999999999999999999987622100      0011122223344 445432   2244443233


Q ss_pred             HHHHHHhCC--CCccEEEeCCC
Q 018404          226 DAALKRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       226 ~~~~~~~~~--~~~d~vid~~g  245 (356)
                      .+.+.+...  +++|++|++.|
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg  144 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCC
Confidence            333333221  37999999988

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.57  E-value=0.00064  Score=57.80  Aligned_cols=97  Identities=9%  Similarity=0.112  Sum_probs=65.2

Q ss_pred             CEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCcc-hhccccchhHHHHHHHhhcCCC-EEE--ecCCcccHHHHHHHh
Q 018404          158 EYIYVSAASGAVGQLVGQFAK-LMGCYVVGSAGSRE-KVWLIPMQSQLVELLKNKFGFD-DAF--NYKEENDLDAALKRC  232 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~-~~g~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~-~vv--~~~~~~~~~~~~~~~  232 (356)
                      .+|+|+||+|++|.++++.+. ..|++|++++++++ +.          +.+. ..+.. .++  |..+.    +.+.+.
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~----------~~~~-~~~~~~~~~~~D~~d~----~~~~~~   70 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI----------PPEI-IDHERVTVIEGSFQNP----GXLEQA   70 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHS----------CHHH-HTSTTEEEEECCTTCH----HHHHHH
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccc----------hhhc-cCCCceEEEECCCCCH----HHHHHH
Confidence            479999999999999998887 89999999999988 76          4443 22221 222  33332    223332


Q ss_pred             CCCCccEEEeCCCchH--HHHHHHhhccC--CeEEEEccccc
Q 018404          233 FPEGIDIYFEHVGGKM--LDAVLLNMRLH--GRIAACGMISQ  270 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~--~~~~~~~l~~~--G~~v~~g~~~~  270 (356)
                      .. ++|++|.+.|...  .+.+++.++..  |++|.++....
T Consensus        71 ~~-~~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           71 VT-NAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             HT-TCSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             Hc-CCCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence            22 5899999999622  44555555543  58998877543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.56  E-value=0.00036  Score=69.03  Aligned_cols=107  Identities=21%  Similarity=0.221  Sum_probs=65.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---------CcchhccccchhHHHHHHHhhcCCCEEEecCCcccHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG---------SREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLD  226 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~  226 (356)
                      .|.++||+||++++|.+.++.+...|++|+++++         +.+..      +++.+.++ +.+...+.|..+..+..
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~------~~~~~~i~-~~~~~~~~D~~d~~~~~   90 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAA------DIVVDEIR-KAGGEAVADYNSVIDGA   90 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CH------HHHHHHHH-HTTCCEEECCCCGGGHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHH------HHHHHHHH-HhCCeEEEEeCCHHHHH
Confidence            4789999999999999999999999999999876         33332      33344555 55655666666643444


Q ss_pred             HHHHHhCC--CCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEcccc
Q 018404          227 AALKRCFP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMIS  269 (356)
Q Consensus       227 ~~~~~~~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~  269 (356)
                      +.+.+...  +++|++|++.|..                          ..+.++..|+.  .|+||.+++..
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a  163 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNS  163 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHH
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHH
Confidence            44444332  3799999999831                          12344555544  48999998754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.56  E-value=0.00015  Score=63.49  Aligned_cols=105  Identities=15%  Similarity=0.164  Sum_probs=69.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|.++++.+...|++|++++++.++.          +.+.++++.. .  ..|..+.+++.+.+.+.
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG----------AATARELGDAARYQHLDVTIEEDWQRVVAYA   73 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHTTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999988776          5444344432 1  22444432333333332


Q ss_pred             CC--CCccEEEeCCCch-----------HH---------------HHHHHhhcc--CCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK-----------ML---------------DAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      ..  +++|++|++.|..           .+               +.+++.++.  .|++|.++....
T Consensus        74 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (254)
T 1hdc_A           74 REEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh
Confidence            21  3699999998831           11               234444533  589999987654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.56  E-value=0.00015  Score=64.36  Aligned_cols=81  Identities=20%  Similarity=0.247  Sum_probs=56.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||++++|.++++.+...|++|++++++.++.          +.+.++++...   ..|..+.+++.+.+.+.
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   73 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERL----------RELEVAHGGNAVGVVGDVRSLQDQKRAAERC   73 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHTBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHH----------HHHHHHcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999998876          55553555432   22444432333333322


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|+++++.|.
T Consensus        74 ~~~~g~iD~lvnnAg~   89 (281)
T 3zv4_A           74 LAAFGKIDTLIPNAGI   89 (281)
T ss_dssp             HHHHSCCCEEECCCCC
T ss_pred             HHhcCCCCEEEECCCc
Confidence            11  379999999883

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.56  E-value=0.00022  Score=62.08  Aligned_cols=84  Identities=17%  Similarity=0.173  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+.. ..  .|..+.+++.+.+.+.
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAA------EAVAKQIV-ADGGTAISVAVDVSDPESAKAMADRT   80 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776      22223333 33432 12  2333332333333322


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        81 ~~~~g~id~li~~Ag~   96 (253)
T 3qiv_A           81 LAEFGGIDYLVNNAAI   96 (253)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence            11  369999999874

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.56  E-value=0.00016  Score=63.95  Aligned_cols=84  Identities=10%  Similarity=0.046  Sum_probs=53.9

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~~  231 (356)
                      .+.+++|+||+  |++|.++++.+...|++|++++++.+..       +..+.+.++.+...  ..|..+.+.+.+.+.+
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~-------~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~   77 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE-------KRVRPIAQELNSPYVYELDVSKEEHFKSLYNS   77 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTH-------HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHH
Confidence            46899999998  9999999999999999999999886511       01133432334222  2344443233333332


Q ss_pred             hC--CCCccEEEeCCCc
Q 018404          232 CF--PEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~--~~~~d~vid~~g~  246 (356)
                      ..  -+++|++|++.|.
T Consensus        78 ~~~~~g~id~lv~nAg~   94 (275)
T 2pd4_A           78 VKKDLGSLDFIVHSVAF   94 (275)
T ss_dssp             HHHHTSCEEEEEECCCC
T ss_pred             HHHHcCCCCEEEECCcc
Confidence            21  1379999999873

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.55  E-value=0.00024  Score=61.79  Aligned_cols=83  Identities=23%  Similarity=0.352  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.      +++.+.++ ..+.. ..  .|..+.+++...+.+.
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dv~~~~~~~~~~~~~   78 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKL------RALGDELT-AAGAKVHVLELDVADRQGVDAAVAST   78 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999987765      22223333 33432 12  2444432333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|++.|
T Consensus        79 ~~~~g~id~lv~nAg   93 (247)
T 2jah_A           79 VEALGGLDILVNNAG   93 (247)
T ss_dssp             HHHHSCCSEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  36999999888

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.55  E-value=0.00085  Score=58.76  Aligned_cols=84  Identities=14%  Similarity=0.261  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHH--
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALK--  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~--  230 (356)
                      ++.+|||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+... .  .|..+.+.+.+.+.  
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYEL------NECLSKWQ-KKGFQVTGSVCDASLRPEREKLMQTV   85 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCeeEEEECCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999987765      12222333 334321 1  23333212222222  


Q ss_pred             -HhCCCCccEEEeCCCc
Q 018404          231 -RCFPEGIDIYFEHVGG  246 (356)
Q Consensus       231 -~~~~~~~d~vid~~g~  246 (356)
                       +..++++|++|.+.|.
T Consensus        86 ~~~~~~~id~li~~Ag~  102 (266)
T 1xq1_A           86 SSMFGGKLDILINNLGA  102 (266)
T ss_dssp             HHHHTTCCSEEEEECCC
T ss_pred             HHHhCCCCcEEEECCCC
Confidence             2222479999999884

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.55  E-value=0.00014  Score=63.68  Aligned_cols=80  Identities=21%  Similarity=0.172  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||++++|.++++.+...|++|++++++.++.          +.+.++++.. ..  .|..+.+++.+.+.+.
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   75 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAG----------EEPAAELGAAVRFRNADVTNEADATAALAFA   75 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------------CEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH----------HHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776          4443244432 12  2444432333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|++.|
T Consensus        76 ~~~~g~id~lv~nAg   90 (257)
T 3tpc_A           76 KQEFGHVHGLVNCAG   90 (257)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  36999999988

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.54  E-value=0.00054  Score=60.95  Aligned_cols=85  Identities=14%  Similarity=0.191  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-chhccccchhHHHHHHHhhcCCC-E--EEecCC----cccHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-EKVWLIPMQSQLVELLKNKFGFD-D--AFNYKE----ENDLDA  227 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~----~~~~~~  227 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++. ++.      +++.+.++...+.. .  ..|..+    .+.+..
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~------~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~   95 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAA------VSLADELNKERSNTAVVCQADLTNSNVLPASCEE   95 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHH------HHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHH------HHHHHHHHhhcCCceEEEEeecCCccCCHHHHHH
Confidence            467999999999999999999989999999999987 554      11222222122332 1  224444    212222


Q ss_pred             HHHHhCC--CCccEEEeCCCc
Q 018404          228 ALKRCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       228 ~~~~~~~--~~~d~vid~~g~  246 (356)
                      .+.+...  +++|++|++.|.
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A           96 IINSCFRAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            2332211  369999999883

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.54  E-value=0.00062  Score=60.88  Aligned_cols=92  Identities=18%  Similarity=0.283  Sum_probs=71.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      -.|.+|+|+| .|.+|.++++.++.+|++|++.+++.++.          +.+. ++|.. .++..   ++.+.+.    
T Consensus       153 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~----------~~~~-~~g~~-~~~~~---~l~~~l~----  212 (293)
T 3d4o_A          153 IHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLL----------ARIA-EMGME-PFHIS---KAAQELR----  212 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHH-HTTSE-EEEGG---GHHHHTT----
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHH----------HHHH-HCCCe-ecChh---hHHHHhc----
Confidence            4689999999 89999999999999999999999988776          6666 77764 33321   3333332    


Q ss_pred             CCccEEEeCCCchHH-HHHHHhhccCCeEEEEcc
Q 018404          235 EGIDIYFEHVGGKML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~  267 (356)
                       ..|+|+.++....+ ...+..+++++.++.++.
T Consensus       213 -~aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          213 -DVDVCINTIPALVVTANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             -TCSEEEECCSSCCBCHHHHHHSCTTCEEEECSS
T ss_pred             -CCCEEEECCChHHhCHHHHHhcCCCCEEEEecC
Confidence             48999999986332 457788999999999986

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.54  E-value=0.0003  Score=60.79  Aligned_cols=82  Identities=20%  Similarity=0.232  Sum_probs=52.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCcchhccccchhHHHHHHHhhcCCC-EE-E--ecCCcccHHHHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGS-AGSREKVWLIPMQSQLVELLKNKFGFD-DA-F--NYKEENDLDAALKR  231 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v-v--~~~~~~~~~~~~~~  231 (356)
                      +.+++|+||+|++|.++++.+...|++|+++ .++.++.      +++.+.++ ..+.. .. +  |..+.+.+.+.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKA------EEVAEEAR-RRGSPLVAVLGANLLEAEAATALVHQ   73 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHH------HHHHHHHH-HTTCSCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHH-hcCCceEEEEeccCCCHHHHHHHHHH
Confidence            3589999999999999999999999999998 6776654      12223333 33432 12 2  44433233333332


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|++|.+.|
T Consensus        74 ~~~~~~~~d~li~~Ag   89 (245)
T 2ph3_A           74 AAEVLGGLDTLVNNAG   89 (245)
T ss_dssp             HHHHHTCCCEEEECCC
T ss_pred             HHHhcCCCCEEEECCC
Confidence            211  36999999988

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.53  E-value=0.00049  Score=59.55  Aligned_cols=84  Identities=21%  Similarity=0.285  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS-AGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+||+|++|.++++.+...|++|+++ .++.++.      +++.+.++ +.+.. ..  .|..+.+.+.+.+.+
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~   76 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSL------DATAEEFK-AAGINVVVAKGDVKNPEDVENMVKT   76 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHH------HHHHHHHH-HTTCCEEEEESCTTSHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHH------HHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            46799999999999999999999999999998 4554443      12223333 33432 12  233333233333332


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|++|.+.|.
T Consensus        77 ~~~~~~~~d~vi~~Ag~   93 (247)
T 2hq1_A           77 AMDAFGRIDILVNNAGI   93 (247)
T ss_dssp             HHHHHSCCCEEEECC--
T ss_pred             HHHhcCCCCEEEECCCC
Confidence            211  369999999884

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.53  E-value=0.00069  Score=59.71  Aligned_cols=80  Identities=16%  Similarity=0.289  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--C-EE--EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--D-DA--FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~-~v--v~~~~~~~~~~~~~  230 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.++++.  . ..  .|..+.+++.+.+.
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   84 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHG----------QKVCNNIGSPDVISFVHCDVTKDEDVRNLVD   84 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHH----------HHHHHHhCCCCceEEEECCCCCHHHHHHHHH
Confidence            467999999999999999999989999999999887664          333323332  1 12  24443323333333


Q ss_pred             HhCC--CCccEEEeCCC
Q 018404          231 RCFP--EGIDIYFEHVG  245 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g  245 (356)
                      +...  +++|++|.+.|
T Consensus        85 ~~~~~~~~id~li~~Ag  101 (278)
T 2bgk_A           85 TTIAKHGKLDIMFGNVG  101 (278)
T ss_dssp             HHHHHHSCCCEEEECCC
T ss_pred             HHHHHcCCCCEEEECCc
Confidence            2211  36999999887

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.52  E-value=0.00038  Score=60.73  Aligned_cols=77  Identities=9%  Similarity=-0.026  Sum_probs=51.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCC--
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFP--  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~--  234 (356)
                      .++||+||+|++|.++++.+...|++|++++++.++.      +++.+ ++ ..+.. ..+|..   ++.+.+.+...  
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~-l~-~~~~~~~~~d~~---~v~~~~~~~~~~~   70 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQK------DELEA-FA-ETYPQLKPMSEQ---EPAELIEAVTSAY   70 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH------HHHHH-HH-HHCTTSEECCCC---SHHHHHHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHH-HH-hcCCcEEEECHH---HHHHHHHHHHHHh
Confidence            3799999999999999999999999999999887765      11222 33 33442 222222   33333332211  


Q ss_pred             CCccEEEeCCC
Q 018404          235 EGIDIYFEHVG  245 (356)
Q Consensus       235 ~~~d~vid~~g  245 (356)
                      +++|++|++.|
T Consensus        71 g~iD~lv~nAg   81 (254)
T 1zmt_A           71 GQVDVLVSNDI   81 (254)
T ss_dssp             SCCCEEEEECC
T ss_pred             CCCCEEEECCC
Confidence            36999999887

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.52  E-value=0.00026  Score=61.75  Aligned_cols=84  Identities=14%  Similarity=0.169  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc--C-C-CEE--EecCCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF--G-F-DDA--FNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~--g-~-~~v--v~~~~~~~~~~~~  229 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.+. +.  + . ...  .|..+.+++.+.+
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~v~~~~   78 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNL------EKVHDEIM-RSNKHVQEPIVLPLDITDCTKADTEI   78 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHH------HHHHHHHH-HHCTTSCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-HhccccCcceEEeccCCCHHHHHHHH
Confidence            467999999999999999999888999999999998776      22223333 22  2 1 122  3444432333333


Q ss_pred             HHhCC--CCccEEEeCCCc
Q 018404          230 KRCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g~  246 (356)
                      .+...  +++|++|++.|.
T Consensus        79 ~~~~~~~g~iD~lvnnAg~   97 (250)
T 3nyw_A           79 KDIHQKYGAVDILVNAAAM   97 (250)
T ss_dssp             HHHHHHHCCEEEEEECCCC
T ss_pred             HHHHHhcCCCCEEEECCCc
Confidence            33211  379999999984

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.52  E-value=0.00041  Score=61.03  Aligned_cols=107  Identities=16%  Similarity=0.240  Sum_probs=68.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE----EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD----AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----vv~~~~~~~~~~~~~~  231 (356)
                      .+.++||+||+|++|.+.++.+...|++|++++++.++.      ++..+.++...+...    ..|..+.+.+.+.+.+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENV------NETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK   82 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHH------HHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh
Confidence            478999999999999999999999999999999987765      222233441221111    1233333123333333


Q ss_pred             hCCCCccEEEeCCCch-----------H---------------HHHHHHhh--ccCCeEEEEccccc
Q 018404          232 CFPEGIDIYFEHVGGK-----------M---------------LDAVLLNM--RLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~~~~d~vid~~g~~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~~  270 (356)
                      +  +++|+++++.|..           .               .+.+++.+  ...|++|.++....
T Consensus        83 ~--g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  147 (267)
T 3t4x_A           83 Y--PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAA  147 (267)
T ss_dssp             C--CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGG
T ss_pred             c--CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhh
Confidence            2  4699999999831           1               23344444  34589999987654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.52  E-value=0.00073  Score=58.05  Aligned_cols=84  Identities=13%  Similarity=0.220  Sum_probs=54.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~~~  233 (356)
                      +.++||+||+|++|.+.++.+...|++|+.++++.++.      +++.+.+.+..+... .  .|..+.+++.+.+.+..
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRL------EKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVL   75 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999998775      122222221334432 2  24443312222222211


Q ss_pred             C--CCccEEEeCCCc
Q 018404          234 P--EGIDIYFEHVGG  246 (356)
Q Consensus       234 ~--~~~d~vid~~g~  246 (356)
                      .  +++|++|.+.|.
T Consensus        76 ~~~g~id~li~~Ag~   90 (235)
T 3l77_A           76 ERFGDVDVVVANAGL   90 (235)
T ss_dssp             HHHSSCSEEEECCCC
T ss_pred             HhcCCCCEEEECCcc
Confidence            1  369999999883

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.51  E-value=0.00046  Score=61.03  Aligned_cols=84  Identities=21%  Similarity=0.289  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.+++..+...|++|++++++.++.      +++.+.++ ..+.. ..  .|..+.+++.+.+.+.
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~  105 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPAD------EKAEHLQK-TYGVHSKAYKCNISDPKSVEETISQQ  105 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCH------HHHHHHHH-HHCSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcceEEEeecCCHHHHHHHHHHH
Confidence            468999999999999999988888899999999887654      12223333 33432 12  2433332333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +.+|++|.+.|.
T Consensus       106 ~~~~g~id~li~~Ag~  121 (279)
T 3ctm_A          106 EKDFGTIDVFVANAGV  121 (279)
T ss_dssp             HHHHSCCSEEEECGGG
T ss_pred             HHHhCCCCEEEECCcc
Confidence            11  369999998873

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.51  E-value=0.00017  Score=62.76  Aligned_cols=76  Identities=13%  Similarity=0.152  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP-  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~-  234 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.   +  ...|..+.+++.+.+.+... 
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~---~--~~~D~~~~~~~~~~~~~~~~~   78 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------KGLF---G--VEVDVTDSDAVDRAFTAVEEH   78 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSE---E--EECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH----------HHhc---C--eeccCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999987765          3221   1  22344443233333332211 


Q ss_pred             -CCccEEEeCCCc
Q 018404          235 -EGIDIYFEHVGG  246 (356)
Q Consensus       235 -~~~d~vid~~g~  246 (356)
                       +++|++|++.|.
T Consensus        79 ~g~id~lv~~Ag~   91 (247)
T 1uzm_A           79 QGPVEVLVSNAGL   91 (247)
T ss_dssp             HSSCSEEEEECSC
T ss_pred             cCCCCEEEECCCC
Confidence             368999998884

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.51  E-value=0.00058  Score=59.58  Aligned_cols=106  Identities=18%  Similarity=0.243  Sum_probs=66.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.        ..+.+. +.+... .  .|..+.+++.+.+.+.
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~--------~~~~l~-~~~~~~~~~~~D~~~~~~v~~~~~~~   73 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAP--------ALAEIA-RHGVKAVHHPADLSDVAQIEALFALA   73 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH--------HHHHHH-TTSCCEEEECCCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH--------HHHHHH-hcCCceEEEeCCCCCHHHHHHHHHHH
Confidence            367999999999999999999999999999998876521        113344 334322 1  2333332333333322


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      ..  +++|++|++.|..                          ..+.+++.+..  .|++|.++....
T Consensus        74 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (255)
T 2q2v_A           74 EREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHG  141 (255)
T ss_dssp             HHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchh
Confidence            11  3699999998831                          12334444433  489999987654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.51  E-value=0.00029  Score=61.49  Aligned_cols=85  Identities=22%  Similarity=0.271  Sum_probs=52.4

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAAL  229 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~  229 (356)
                      ..++++|||+||+|++|.+++..+...|++|++++ ++.++.      .+..+.++ +.+.. ..  .|..+.+++.+.+
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~   82 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRR------VKWLEDQK-ALGFDFYASEGNVGDWDSTKQAF   82 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSH------HHHHHHHH-HTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHH-hcCCeeEEEecCCCCHHHHHHHH
Confidence            35678999999999999999999999999999988 444433      12223334 44432 22  2333332333333


Q ss_pred             HHhC--CCCccEEEeCCC
Q 018404          230 KRCF--PEGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~--~~~~d~vid~~g  245 (356)
                      .+..  -+++|++|.+.|
T Consensus        83 ~~~~~~~g~id~lv~~Ag  100 (256)
T 3ezl_A           83 DKVKAEVGEIDVLVNNAG  100 (256)
T ss_dssp             HHHHHHTCCEEEEEECCC
T ss_pred             HHHHHhcCCCCEEEECCC
Confidence            3221  137999999988

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.50  E-value=0.0004  Score=61.39  Aligned_cols=79  Identities=11%  Similarity=0.201  Sum_probs=54.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--C-E--EEecCCcccHHHHHHHh
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--D-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      .++||+||+|++|.++++.+...|++|++++++.++.          +.+.+++..  . .  ..|..+.+++...+.+.
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   91 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERL----------QALAGELSAKTRVLPLTLDVRDRAAMSAAVDNL   91 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            6899999999999999999999999999999987776          443323321  1 1  22444432344444443


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|++.|.
T Consensus        92 ~~~~g~iD~lvnnAG~  107 (272)
T 2nwq_A           92 PEEFATLRGLINNAGL  107 (272)
T ss_dssp             CGGGSSCCEEEECCCC
T ss_pred             HHHhCCCCEEEECCCC
Confidence            22  378999999873

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.50  E-value=0.00037  Score=61.55  Aligned_cols=84  Identities=15%  Similarity=0.285  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHH---HH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDA---AL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~---~~  229 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+...   ..|..+.+++.+   .+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   92 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKEL------DECLEIWR-EKGLNVEGSVCDLLSRTERDKLMQTV   92 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999987765      12223333 334321   224444322322   33


Q ss_pred             HHhCCCCccEEEeCCCc
Q 018404          230 KRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~  246 (356)
                      .+..++++|++|++.|.
T Consensus        93 ~~~~~g~id~lv~nAg~  109 (273)
T 1ae1_A           93 AHVFDGKLNILVNNAGV  109 (273)
T ss_dssp             HHHTTSCCCEEEECCCC
T ss_pred             HHHcCCCCcEEEECCCC
Confidence            33333579999999883

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.50  E-value=0.00029  Score=62.43  Aligned_cols=83  Identities=17%  Similarity=0.274  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+.. .  ..|..+.+++...+.+.
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dv~~~~~v~~~~~~~   93 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGL------RTTLKELR-EAGVEADGRTCDVRSVPEIEALVAAV   93 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999987765      12223333 33432 1  22444432333333322


Q ss_pred             C--CCCccEEEeCCC
Q 018404          233 F--PEGIDIYFEHVG  245 (356)
Q Consensus       233 ~--~~~~d~vid~~g  245 (356)
                      .  -+++|++|++.|
T Consensus        94 ~~~~g~iD~lv~~Ag  108 (277)
T 2rhc_B           94 VERYGPVDVLVNNAG  108 (277)
T ss_dssp             HHHTCSCSEEEECCC
T ss_pred             HHHhCCCCEEEECCC
Confidence            1  136999999988

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.50  E-value=0.00039  Score=61.83  Aligned_cols=84  Identities=13%  Similarity=0.334  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.++++.+...|++|+++.++.++.      +++.+.++ +.+... .  .|..+.+.+.+.+.+.
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dl~d~~~v~~~~~~~  115 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC------DSVVDEIK-SFGYESSGYAGDVSKKEEISEVINKI  115 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHH------HHHHHHHH-TTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHH------HHHHHHHH-hcCCceeEEECCCCCHHHHHHHHHHH
Confidence            367999999999999999998888899999988776665      12223333 334421 1  2444432333333332


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|++|.+.|.
T Consensus       116 ~~~~~~id~li~~Ag~  131 (285)
T 2c07_A          116 LTEHKNVDILVNNAGI  131 (285)
T ss_dssp             HHHCSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            1  2369999999883

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.50  E-value=0.00024  Score=63.24  Aligned_cols=84  Identities=14%  Similarity=0.175  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ ..+...   ..|..+.+++.+.+.+.
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEV------EEVADEIV-GAGGQAIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHH------HHHHHHHT-TTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776      22222232 233321   22444432333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|+++.+.|.
T Consensus       100 ~~~~g~iD~lVnnAg~  115 (283)
T 3v8b_A          100 VLKFGHLDIVVANAGI  115 (283)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHhCCCCEEEECCCC
Confidence            11  379999999883

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.50  E-value=0.00091  Score=57.73  Aligned_cols=78  Identities=15%  Similarity=0.196  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE--ecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF--NYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~~~~~  233 (356)
                      ++.+|+|+||+|++|.++++.+...|++|++++++.++.          +.+.++.....++  |..+.+.+.+.+.+  
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   73 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----------DSLVRECPGIEPVCVDLGDWEATERALGS--   73 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHSTTCEEEECCTTCHHHHHHHHTT--
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHcCCCCEEEEeCCCHHHHHHHHHH--
Confidence            478999999999999999999999999999999987776          5444244222233  33332122222221  


Q ss_pred             CCCccEEEeCCC
Q 018404          234 PEGIDIYFEHVG  245 (356)
Q Consensus       234 ~~~~d~vid~~g  245 (356)
                      -+++|++|++.|
T Consensus        74 ~~~id~vi~~Ag   85 (244)
T 3d3w_A           74 VGPVDLLVNNAA   85 (244)
T ss_dssp             CCCCCEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence            136999999988

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.50  E-value=0.00025  Score=62.34  Aligned_cols=83  Identities=19%  Similarity=0.291  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-C-E--EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-D-D--AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~-~--vv~~~~~~~~~~~~~~  231 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+. . .  ..|..+.+++.+.+.+
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADI------DACVADLD-QLGSGKVIGVQTDVSDRAQCDALAGR   81 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-TTSSSCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hhCCCcEEEEEcCCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999988775      22333444 3342 1 1  2244443233333332


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|+++++.|
T Consensus        82 ~~~~~g~id~lvnnAg   97 (262)
T 3pk0_A           82 AVEEFGGIDVVCANAG   97 (262)
T ss_dssp             HHHHHSCCSEEEECCC
T ss_pred             HHHHhCCCCEEEECCC
Confidence            211  36999999988

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.50  E-value=0.00054  Score=59.61  Aligned_cols=76  Identities=16%  Similarity=0.282  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhC-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCF-  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~-  233 (356)
                      ++.+++|+||+|++|.+.++.+...|++|++++++.+..               +.+.. ...|..+.+++.+.+.+.. 
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~D~~d~~~~~~~~~~~~~   70 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE---------------QYPFATEVMDVADAAQVAQVCQRLLA   70 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS---------------CCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh---------------cCCceEEEcCCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999876532               23321 1234444323333333321 


Q ss_pred             -CCCccEEEeCCCc
Q 018404          234 -PEGIDIYFEHVGG  246 (356)
Q Consensus       234 -~~~~d~vid~~g~  246 (356)
                       .+++|++|++.|.
T Consensus        71 ~~g~id~lv~~Ag~   84 (250)
T 2fwm_X           71 ETERLDALVNAAGI   84 (250)
T ss_dssp             HCSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence             1379999999883

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.49  E-value=0.00026  Score=62.03  Aligned_cols=80  Identities=18%  Similarity=0.140  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.++++.. ..  .|..+.+++.+.+.+.
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG----------EAQAKKLGNNCVFAPADVTSEKDVQTALALA   80 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH----------HHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhH----------HHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999988776          4444355542 12  2444432333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        81 ~~~~g~id~li~~Ag   95 (265)
T 2o23_A           81 KGKFGRVDVAVNCAG   95 (265)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHCCCCCEEEECCc
Confidence            11  36999999887

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.48  E-value=0.00019  Score=62.65  Aligned_cols=96  Identities=16%  Similarity=0.218  Sum_probs=62.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      .+++|+||+|++|.++++.+...|++|++++++.++.          +.   .+    ..|..+.+.+.+.+.++ .+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----------~~---~~----~~Dl~~~~~v~~~~~~~-~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------IA---DL----STAEGRKQAIADVLAKC-SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------EC---CT----TSHHHHHHHHHHHHTTC-TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhh----------cc---cc----ccCCCCHHHHHHHHHHh-CCCC
Confidence            3799999999999999999999999999999887664          10   00    01111111222223322 2468


Q ss_pred             cEEEeCCCchH-------------------HHHHHHhhccC--CeEEEEcccccc
Q 018404          238 DIYFEHVGGKM-------------------LDAVLLNMRLH--GRIAACGMISQY  271 (356)
Q Consensus       238 d~vid~~g~~~-------------------~~~~~~~l~~~--G~~v~~g~~~~~  271 (356)
                      |++|++.|...                   .+.+++.+.+.  |++|.++.....
T Consensus        64 d~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  118 (257)
T 1fjh_A           64 DGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA  118 (257)
T ss_dssp             SEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             CEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence            99999888522                   34455555443  899999876543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.48  E-value=0.00055  Score=59.86  Aligned_cols=39  Identities=18%  Similarity=0.190  Sum_probs=35.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      .+.+|+|+||+|++|.++++.+...|++|++++++.++.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~   44 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAA   44 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence            467999999999999999999888999999999987765

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.47  E-value=0.00031  Score=62.09  Aligned_cols=83  Identities=20%  Similarity=0.344  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+....   .|..+.+++.+.+.+.
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dv~d~~~v~~~~~~~   97 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRV------AQTVQEFR-NVGHDAEAVAFDVTSESEIIEAFARL   97 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHH------HHHHHHHH-HTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999887765      23334444 4454321   2333332333333322


Q ss_pred             C--CCCccEEEeCCC
Q 018404          233 F--PEGIDIYFEHVG  245 (356)
Q Consensus       233 ~--~~~~d~vid~~g  245 (356)
                      .  .+++|+++.+.|
T Consensus        98 ~~~~g~iD~lv~nAg  112 (271)
T 4ibo_A           98 DEQGIDVDILVNNAG  112 (271)
T ss_dssp             HHHTCCCCEEEECCC
T ss_pred             HHHCCCCCEEEECCC
Confidence            1  237999999988

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.47  E-value=0.00026  Score=62.36  Aligned_cols=85  Identities=20%  Similarity=0.283  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.+.+..+...   ..|..+.+++.+.+.+.
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   93 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEA------SEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV   93 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999987765      112222211335432   22444432333333322


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|++.|.
T Consensus        94 ~~~~g~iD~lvnnAg~  109 (267)
T 1vl8_A           94 KEKFGKLDTVVNAAGI  109 (267)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence            11  369999999883

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.47  E-value=0.00036  Score=61.84  Aligned_cols=78  Identities=21%  Similarity=0.175  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.          +.+.++++...   ..|..+.+++.+.+.+.
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~----------~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKG----------KALADELGNRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHH----------HHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999998876          55554555431   23444432344444444


Q ss_pred             CC-CCccEEEeC
Q 018404          233 FP-EGIDIYFEH  243 (356)
Q Consensus       233 ~~-~~~d~vid~  243 (356)
                      .. +++|+++.+
T Consensus        99 ~~~~~id~lv~~  110 (281)
T 3ppi_A           99 NQLGRLRYAVVA  110 (281)
T ss_dssp             TTSSEEEEEEEC
T ss_pred             HHhCCCCeEEEc
Confidence            11 278999988

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.46  E-value=0.00051  Score=59.30  Aligned_cols=82  Identities=21%  Similarity=0.321  Sum_probs=52.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHh
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGS-AGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRC  232 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~  232 (356)
                      |.+|+|+||+|++|.++++.+...|++|+++ .++.++.      +++.+.++ +.+.. .  ..|..+.+++.+.+.+.
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAA------EEVSKQIE-AYGGQAITFGGDVSKEADVEAMMKTA   73 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-HHTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH------HHHHHHHH-hcCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999985 6666554      12223333 33432 1  12444332333333332


Q ss_pred             C--CCCccEEEeCCC
Q 018404          233 F--PEGIDIYFEHVG  245 (356)
Q Consensus       233 ~--~~~~d~vid~~g  245 (356)
                      .  .+++|++|.+.|
T Consensus        74 ~~~~g~id~li~~Ag   88 (244)
T 1edo_A           74 IDAWGTIDVVVNNAG   88 (244)
T ss_dssp             HHHSSCCSEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            1  136999999987

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.46  E-value=0.00047  Score=60.38  Aligned_cols=83  Identities=13%  Similarity=0.262  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHH---H
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAA---L  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~---~  229 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ ..+.. .  ..|..+.+++.+.   +
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKEL------NDCLTQWR-SKGFKVEASVCDLSSRSERQELMNTV   80 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            478999999999999999999989999999999987765      12223333 33432 1  1244443223322   3


Q ss_pred             HHhCCCCccEEEeCCC
Q 018404          230 KRCFPEGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g  245 (356)
                      .+..++++|++|++.|
T Consensus        81 ~~~~~g~id~lv~~Ag   96 (260)
T 2ae2_A           81 ANHFHGKLNILVNNAG   96 (260)
T ss_dssp             HHHTTTCCCEEEECCC
T ss_pred             HHHcCCCCCEEEECCC
Confidence            3333257999999988

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.46  E-value=0.00027  Score=63.21  Aligned_cols=83  Identities=14%  Similarity=0.244  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-C-E--EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-D-D--AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~-~--vv~~~~~~~~~~~~~~  231 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+. . .  ..|..+.+++.+.+.+
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~~Dv~d~~~v~~~~~~  112 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPREL------SSVTAELG-ELGAGNVIGVRLDVSDPGSCADAART  112 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG------HHHHHHHT-TSSSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hhCCCcEEEEEEeCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999998876      22223333 3331 1 1  2244443233333332


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|++|++.|
T Consensus       113 ~~~~~g~iD~lvnnAg  128 (293)
T 3rih_A          113 VVDAFGALDVVCANAG  128 (293)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            211  36999999988

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.46  E-value=0.00025  Score=62.49  Aligned_cols=81  Identities=15%  Similarity=0.223  Sum_probs=54.4

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCcch-hccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHH
Q 018404          156 KGEYIYVSAA--SGAVGQLVGQFAKLMGCYVVGSAGSREK-VWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga--~g~vG~~ai~la~~~g~~Vi~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~  229 (356)
                      ++.+++|+||  +|++|.++++.+...|++|++++++.++ .          +.+.++++..   ...|..+.+++.+.+
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   75 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI----------QRITDRLPAKAPLLELDVQNEEHLASLA   75 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHH----------HHHHTTSSSCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHH----------HHHHHhcCCCceEEEccCCCHHHHHHHH
Confidence            4789999999  9999999999999999999999988655 3          3443244432   123444432333333


Q ss_pred             H---HhCC--CCccEEEeCCCc
Q 018404          230 K---RCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       230 ~---~~~~--~~~d~vid~~g~  246 (356)
                      .   +..+  +++|++|++.|.
T Consensus        76 ~~~~~~~g~~~~iD~lv~nAg~   97 (269)
T 2h7i_A           76 GRVTEAIGAGNKLDGVVHSIGF   97 (269)
T ss_dssp             HHHHHHHCTTCCEEEEEECCCC
T ss_pred             HHHHHHhCCCCCceEEEECCcc
Confidence            2   2222  169999998873

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.45  E-value=0.0003  Score=62.31  Aligned_cols=85  Identities=15%  Similarity=0.238  Sum_probs=56.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      -.|.++||+||++++|.++++.+...|++|++++++.++.      +++.+.+.+..+...   ..|..+.+++.+.+.+
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   98 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRV------LTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQ   98 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHH------HHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999999987765      122222321234321   2244443233333333


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|+++++.|
T Consensus        99 ~~~~~g~id~lv~nAg  114 (277)
T 4fc7_A           99 ALKEFGRIDILINCAA  114 (277)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCc
Confidence            221  37999999998

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.45  E-value=0.00028  Score=62.03  Aligned_cols=83  Identities=12%  Similarity=0.141  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc--CCC-E--EEecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF--GFD-D--AFNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~-~--vv~~~~~~~~~~~~~  230 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.  +.. .  ..|..+.+++.+.+.
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~   84 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGL------EASKAAVL-ETAPDAEVLTTVADVSDEAQVEAYVT   84 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HHCTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hhcCCceEEEEEccCCCHHHHHHHHH
Confidence            468999999999999999999989999999999987765      12222333 22  332 1  224444323333333


Q ss_pred             HhCC--CCccEEEeCCC
Q 018404          231 RCFP--EGIDIYFEHVG  245 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g  245 (356)
                      +...  +++|++|++.|
T Consensus        85 ~~~~~~g~id~lv~nAg  101 (267)
T 1iy8_A           85 ATTERFGRIDGFFNNAG  101 (267)
T ss_dssp             HHHHHHSCCSEEEECCC
T ss_pred             HHHHHcCCCCEEEECCC
Confidence            3211  36999999987

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.44  E-value=0.00031  Score=61.62  Aligned_cols=84  Identities=20%  Similarity=0.317  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.+++..+.. ..  .|..+.+++.+.+.+.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRL------HEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESV   79 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH------HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999987765      12222233111432 11  2444432333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        80 ~~~~g~id~lv~~Ag   94 (263)
T 3ai3_A           80 RSSFGGADILVNNAG   94 (263)
T ss_dssp             HHHHSSCSEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  36999999988

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.43  E-value=0.00033  Score=61.80  Aligned_cols=81  Identities=14%  Similarity=0.150  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~~~~  233 (356)
                      ++.++||+||+|++|.++++.+...|++|++++++.++.          +.+.+++.....  .|..+.+++.+.+.+..
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   77 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----------RALEQELPGAVFILCDVTQEDDVKTLVSETI   77 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhcCCeEEEcCCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999987776          544424432122  24344323333333221


Q ss_pred             C--CCccEEEeCCCc
Q 018404          234 P--EGIDIYFEHVGG  246 (356)
Q Consensus       234 ~--~~~d~vid~~g~  246 (356)
                      .  +++|++|++.|.
T Consensus        78 ~~~g~iD~lv~nAg~   92 (270)
T 1yde_A           78 RRFGRLDCVVNNAGH   92 (270)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            1  369999998873

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.43  E-value=0.00038  Score=60.95  Aligned_cols=83  Identities=19%  Similarity=0.269  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+...   ..|..+.+++.+.+.+.
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENV------DRTVATLQ-GEGLSVTGTVCHVGKAEDRERLVAMA   85 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999987765      12223333 334321   12333332333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|++.|
T Consensus        86 ~~~~g~iD~lv~~Ag  100 (260)
T 2zat_A           86 VNLHGGVDILVSNAA  100 (260)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  36999999987

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.42  E-value=0.00032  Score=62.34  Aligned_cols=83  Identities=22%  Similarity=0.283  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~~~  232 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+....   .|..+.+.+...+.+.
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNAL------AELTDEIA-GGGGEAAALAGDVGDEALHEALVELA   79 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHH------HHHHHHHT-TTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999988776      12222222 2233211   2333331233223322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|++.|
T Consensus        80 ~~~~g~iD~lvnnAg   94 (280)
T 3tox_A           80 VRRFGGLDTAFNNAG   94 (280)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  36999999988

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.41  E-value=0.00096  Score=65.83  Aligned_cols=107  Identities=18%  Similarity=0.196  Sum_probs=69.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc---------chhccccchhHHHHHHHhhcCCCEEEecCCcccHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR---------EKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLD  226 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~  226 (356)
                      .|++++|+||++|+|.+.++.+...|++|++.+++.         +..      +++.+.++ +.|...+.|..+..+..
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~------~~~~~~i~-~~g~~~~~d~~d~~~~~   79 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAA------DVVVDEIV-KNGGVAVADYNNVLDGD   79 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHH------HHHHHHHH-HTTCEEEEECCCTTCHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHH------HHHHHHHH-hcCCeEEEEcCCHHHHH
Confidence            478999999999999999999999999999987654         222      22334454 44544455655532322


Q ss_pred             ---HHHHHhCCCCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          227 ---AALKRCFPEGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       227 ---~~~~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                         +.+.+.. |.+|+++++.|..                          ..+.++..|++  +|+||.+++..+
T Consensus        80 ~~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag  153 (604)
T 2et6_A           80 KIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG  153 (604)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence               3332222 4699999999830                          12455556643  589999987543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.41  E-value=0.00043  Score=61.03  Aligned_cols=85  Identities=20%  Similarity=0.300  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEE--ecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAF--NYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv--~~~~~~~~~~~~~~~  232 (356)
                      .+.+|||+||+|++|.++++.+...|++|++++++.++.     .+++.+.++ +.+.. .++  |..+.+++.+.+.+.
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEV-----ADALKNELE-EKGYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-----HHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHH-----HHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHH
Confidence            478999999999999999999989999999999854432     122334444 44543 222  333332333333332


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus       102 ~~~~g~id~li~nAg~  117 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGV  117 (271)
T ss_dssp             HHHHSSCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCc
Confidence            21  379999999883

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.41  E-value=0.00086  Score=59.53  Aligned_cols=84  Identities=12%  Similarity=0.105  Sum_probs=53.6

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~~  231 (356)
                      .+.++||+||+  |++|.++++.+...|++|++++++.+..       +..+.+.++.+....  .|..+.+++.+.+.+
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   92 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLE-------KRVREIAKGFGSDLVVKCDVSLDEDIKNLKKF   92 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-------HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHH
Confidence            47899999998  9999999999888999999999886411       111333323342222  344443233333332


Q ss_pred             hC--CCCccEEEeCCCc
Q 018404          232 CF--PEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~--~~~~d~vid~~g~  246 (356)
                      ..  -+++|++|.+.|.
T Consensus        93 ~~~~~g~iD~lv~~Ag~  109 (285)
T 2p91_A           93 LEENWGSLDIIVHSIAY  109 (285)
T ss_dssp             HHHHTSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            21  1379999999873

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.41  E-value=0.00045  Score=60.24  Aligned_cols=83  Identities=16%  Similarity=0.210  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.+|+|+||+|++|.++++.+...|++|++++++.++.      +++.+.++ ..+.. ..  .|..+.+++.+.+.+.
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMA------TKAVEDLR-MEGHDVSSVVMDVTNTESVQNAVRSV   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999987664      12223333 33432 12  2434432333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        85 ~~~~~~id~vi~~Ag   99 (260)
T 3awd_A           85 HEQEGRVDILVACAG   99 (260)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  36999999987

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.40  E-value=0.00023  Score=67.51  Aligned_cols=100  Identities=16%  Similarity=0.193  Sum_probs=72.2

Q ss_pred             HHHHHHHcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcc
Q 018404          145 WAGFYEICAP-KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEN  223 (356)
Q Consensus       145 ~~~l~~~~~~-~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~  223 (356)
                      +.++.+.... -.|++|+|.| .|++|.++++.++..|++|+++++++.+.          ..+. ..+.+ +.+..   
T Consensus       252 ~dgi~r~tg~~L~GKtVvVtG-aGgIG~aiA~~Laa~GA~Viv~D~~~~~a----------~~Aa-~~g~d-v~~le---  315 (488)
T 3ond_A          252 PDGLMRATDVMIAGKVAVVAG-YGDVGKGCAAALKQAGARVIVTEIDPICA----------LQAT-MEGLQ-VLTLE---  315 (488)
T ss_dssp             HHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTCE-ECCGG---
T ss_pred             HHHHHHHcCCcccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHH----------HHHH-HhCCc-cCCHH---
Confidence            3344343333 4789999999 56999999999999999999999887776          5555 55642 21111   


Q ss_pred             cHHHHHHHhCCCCccEEEeCCCc-hHH-HHHHHhhccCCeEEEEccc
Q 018404          224 DLDAALKRCFPEGIDIYFEHVGG-KML-DAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid~~g~-~~~-~~~~~~l~~~G~~v~~g~~  268 (356)
                      +   .+     ..+|+++++.|. ..+ ...++.+++++.++.+|..
T Consensus       316 e---~~-----~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          316 D---VV-----SEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             G---TT-----TTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             H---HH-----HhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            1   11     258999999997 444 4588899999999998863

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.39  E-value=0.00088  Score=57.79  Aligned_cols=100  Identities=16%  Similarity=0.252  Sum_probs=65.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCC-
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFP-  234 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~-  234 (356)
                      +.+++|+||+|++|.++++.+...|++|++++++.++.          .  + +++... ..|..+. +..+.+.+... 
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~----------~--~-~~~~~~~~~D~~~~-~~~~~~~~~~~~   67 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA----------A--Q-SLGAVPLPTDLEKD-DPKGLVKRALEA   67 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH----------H--H-HHTCEEEECCTTTS-CHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------H--H-hhCcEEEecCCchH-HHHHHHHHHHHH
Confidence            56899999999999999999999999999999886543          1  1 334321 2243332 44443333221 


Q ss_pred             -CCccEEEeCCCch--------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          235 -EGIDIYFEHVGGK--------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       235 -~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                       +++|++|++.|..                          ..+.+++.+.  ..|++|.++....
T Consensus        68 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  132 (239)
T 2ekp_A           68 LGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTT  132 (239)
T ss_dssp             HTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh
Confidence             3699999998831                          1233444443  3589999987654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.39  E-value=0.00068  Score=59.19  Aligned_cols=76  Identities=13%  Similarity=0.121  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC--
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF--  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~--  233 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.     ....|..+.+++.+.+.+..  
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~-----~~~~Dl~d~~~v~~~~~~~~~~   84 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------EGFL-----AVKCDITDTEQVEQAYKEIEET   84 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSE-----EEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------ccce-----EEEecCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999887665          2111     11224444323333333221  


Q ss_pred             CCCccEEEeCCCc
Q 018404          234 PEGIDIYFEHVGG  246 (356)
Q Consensus       234 ~~~~d~vid~~g~  246 (356)
                      .+++|++|.+.|.
T Consensus        85 ~g~iD~lv~nAg~   97 (253)
T 2nm0_A           85 HGPVEVLIANAGV   97 (253)
T ss_dssp             TCSCSEEEEECSC
T ss_pred             cCCCCEEEECCCC
Confidence            1368999998873

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.38  E-value=0.0013  Score=58.01  Aligned_cols=104  Identities=15%  Similarity=0.110  Sum_probs=69.9

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHh---hc-C--CCEEEec
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKN---KF-G--FDDAFNY  219 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~-g--~~~vv~~  219 (356)
                      +.....+.++++||-.| +| .|..+..+++..  +.+|++++.+++..          +.+++   .. |  ...+ +.
T Consensus        91 i~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~----------~~a~~~~~~~~g~~~~~v-~~  157 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAG-AG-SGALTLSLLRAVGPAGQVISYEQRADHA----------EHARRNVSGCYGQPPDNW-RL  157 (280)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHH----------HHHHHHHHHHHTSCCTTE-EE
T ss_pred             HHHHcCCCCCCEEEEEc-cc-ccHHHHHHHHHhCCCCEEEEEeCCHHHH----------HHHHHHHHHhcCCCCCcE-EE
Confidence            33456789999999998 55 788899999976  56999999988876          44442   22 4  2211 11


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCc--hHHHHHHHhhccCCeEEEEcc
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGG--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ... ++.+.  ....+.+|+|+.....  ..+..+.+.|+++|+++.+..
T Consensus       158 ~~~-d~~~~--~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          158 VVS-DLADS--ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             ECS-CGGGC--CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             EEC-chHhc--CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            111 21111  1112379999976654  578899999999999987643

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.38  E-value=0.00034  Score=61.61  Aligned_cols=39  Identities=21%  Similarity=0.296  Sum_probs=35.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      .|.++||+||+|++|.++++.+...|++|++++++.+..
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~   65 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI   65 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            478999999999999999999999999999999886654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.37  E-value=0.00051  Score=61.03  Aligned_cols=83  Identities=19%  Similarity=0.251  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--E--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--A--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--v--v~~~~~~~~~~~~~~  231 (356)
                      ++.+|+|+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+...  .  .|..+.+.+.+.+.+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~Dl~d~~~v~~~~~~   99 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETL------QKVVSHCL-ELGAASAHYIAGTMEDMTFAEQFVAQ   99 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HHTCSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-HhCCCceEEEeCCCCCHHHHHHHHHH
Confidence            467999999999999999999999999999999988775      22223333 334321  2  233332123222322


Q ss_pred             hC--CCCccEEEeC-CC
Q 018404          232 CF--PEGIDIYFEH-VG  245 (356)
Q Consensus       232 ~~--~~~~d~vid~-~g  245 (356)
                      ..  .+++|++|.+ .|
T Consensus       100 ~~~~~g~iD~li~naag  116 (286)
T 1xu9_A          100 AGKLMGGLDMLILNHIT  116 (286)
T ss_dssp             HHHHHTSCSEEEECCCC
T ss_pred             HHHHcCCCCEEEECCcc
Confidence            21  1379999998 44

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.37  E-value=0.00061  Score=61.73  Aligned_cols=83  Identities=20%  Similarity=0.283  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---------CcchhccccchhHHHHHHHhhcCCCEEEecCCcccHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG---------SREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLD  226 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~  226 (356)
                      .|.++||+||+|++|.++++.+...|++|+++++         +.++.      +++.+.++ ..+...+.|..+..++.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~------~~~~~~l~-~~~~~~~~D~~~~~~~~   80 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAA------DKVVEEIR-RRGGKAVANYDSVEAGE   80 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHH------HHHHHHHH-HTTCEEEEECCCGGGHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHH------HHHHHHHH-hhCCeEEEeCCCHHHHH
Confidence            4789999999999999999999999999999754         33332      22334444 44544456666543333


Q ss_pred             HHHHHhC--CCCccEEEeCCC
Q 018404          227 AALKRCF--PEGIDIYFEHVG  245 (356)
Q Consensus       227 ~~~~~~~--~~~~d~vid~~g  245 (356)
                      ..+.+..  .+++|++|++.|
T Consensus        81 ~~~~~~~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           81 KLVKTALDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHHHHHHTSCCCEEEECCC
T ss_pred             HHHHHHHHHcCCCCEEEECCC
Confidence            3333221  137999999988

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.37  E-value=0.0005  Score=59.55  Aligned_cols=84  Identities=17%  Similarity=0.175  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--CEEE--ec--CCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--DDAF--NY--KEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~vv--~~--~~~~~~~~~~  229 (356)
                      ++.+++|+||+|++|.++++.+...|++|+.++++.++.      +++.+.++ +.+.  ..++  |.  .+.+++.+.+
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~d~d~~~~~~~~~~~   85 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASL------AEVSDQIK-SAGQPQPLIIALNLENATAQQYRELA   85 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTSCCCEEEECCTTTCCHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHH------HHHHHHHH-hcCCCCceEEEeccccCCHHHHHHHH
Confidence            578999999999999999999999999999999998776      23333444 3332  1222  22  2221222222


Q ss_pred             HHhCC--CCccEEEeCCCc
Q 018404          230 KRCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g~  246 (356)
                      .+...  +++|++|.+.|.
T Consensus        86 ~~~~~~~g~id~lv~nAg~  104 (247)
T 3i1j_A           86 ARVEHEFGRLDGLLHNASI  104 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCC
T ss_pred             HHHHHhCCCCCEEEECCcc
Confidence            22211  369999999883

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.36  E-value=0.0013  Score=57.27  Aligned_cols=105  Identities=17%  Similarity=0.121  Sum_probs=65.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcc--hhccccchhHHHHHHHhhc-CCC-EE--EecCCc-ccHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSRE--KVWLIPMQSQLVELLKNKF-GFD-DA--FNYKEE-NDLDA  227 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~--~~~~~~~~~~~~~~~~~~~-g~~-~v--v~~~~~-~~~~~  227 (356)
                      ++.+++|+||+|++|.++++.+...|++ |++++++.+  ..          +.+.+.. +.. ..  .|..+. +++.+
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~----------~~l~~~~~~~~~~~~~~D~~~~~~~~~~   73 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL----------AELKAINPKVNITFHTYDVTVPVAESKK   73 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH----------HHHHHHCTTSEEEEEECCTTSCHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHH----------HHHHHhCCCceEEEEEEecCCChHHHHH
Confidence            4679999999999999999999999995 998888763  22          4444232 221 11  233332 23333


Q ss_pred             HHHHhCC--CCccEEEeCCCc---h---------------HHHHHHHhhcc-----CCeEEEEccccc
Q 018404          228 ALKRCFP--EGIDIYFEHVGG---K---------------MLDAVLLNMRL-----HGRIAACGMISQ  270 (356)
Q Consensus       228 ~~~~~~~--~~~d~vid~~g~---~---------------~~~~~~~~l~~-----~G~~v~~g~~~~  270 (356)
                      .+.+...  +++|++|.+.|.   +               ..+.+++.+.+     +|+++.+++...
T Consensus        74 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (254)
T 1sby_A           74 LLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             HHHHHHHhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh
Confidence            3333221  369999999983   1               12334444533     589999987654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.36  E-value=0.00037  Score=60.60  Aligned_cols=80  Identities=13%  Similarity=0.167  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~v--v~~~~~~~~~~~~~~  231 (356)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.++++..  ..  .|..+.+.+.+.+.+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAAL----------DRAAQELGAAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHGGGEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhcccceeEEEEecCCHHHHHHHHHH
Confidence            467999999999999999999999999999999987765          4443244332  11  243333123322222


Q ss_pred             hC-CCCccEEEeCCC
Q 018404          232 CF-PEGIDIYFEHVG  245 (356)
Q Consensus       232 ~~-~~~~d~vid~~g  245 (356)
                      .. .+++|++|.+.|
T Consensus        80 ~~~~~~id~li~~Ag   94 (254)
T 2wsb_A           80 AEAVAPVSILVNSAG   94 (254)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHhhCCCcEEEECCc
Confidence            11 146999999988

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.36  E-value=0.00073  Score=56.91  Aligned_cols=102  Identities=19%  Similarity=0.286  Sum_probs=69.2

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLD  226 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~  226 (356)
                      ....+.++++||-.| +|. |..++.+++. +++|++++.+++..      +.+.+.++ .+|..   .++..    +..
T Consensus        49 ~~l~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~v~~vD~s~~~~------~~a~~~~~-~~g~~~~v~~~~~----d~~  114 (204)
T 3njr_A           49 AALAPRRGELLWDIG-GGS-GSVSVEWCLA-GGRAITIEPRADRI------ENIQKNID-TYGLSPRMRAVQG----TAP  114 (204)
T ss_dssp             HHHCCCTTCEEEEET-CTT-CHHHHHHHHT-TCEEEEEESCHHHH------HHHHHHHH-HTTCTTTEEEEES----CTT
T ss_pred             HhcCCCCCCEEEEec-CCC-CHHHHHHHHc-CCEEEEEeCCHHHH------HHHHHHHH-HcCCCCCEEEEeC----chh
Confidence            445788999999999 554 8889999988 99999999998876      22223333 45554   22222    211


Q ss_pred             HHHHHhCCCCccEEEeCCCc--hHHHHHHHhhccCCeEEEEcc
Q 018404          227 AALKRCFPEGIDIYFEHVGG--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      +.+..  .+.+|+||...+.  ..+..+.+.|+|+|+++....
T Consensus       115 ~~~~~--~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          115 AALAD--LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             GGGTT--SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             hhccc--CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence            11111  1269999976554  267899999999999987643

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.36  E-value=0.00054  Score=61.40  Aligned_cols=89  Identities=11%  Similarity=0.149  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh------ccccchhHHHHHHHhhcCCCE---EEecCCcccHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV------WLIPMQSQLVELLKNKFGFDD---AFNYKEENDLD  226 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~  226 (356)
                      .|.++||+||++++|.++++.+...|++|++++++++..      +..+.-++..+.++ ..+...   .+|..+.+++.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE-ALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHH-hcCCceEEEECCCCCHHHHH
Confidence            478999999999999999999999999999998762200      00011122233444 445432   23444432333


Q ss_pred             HHHHHhCC--CCccEEEeCCC
Q 018404          227 AALKRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       227 ~~~~~~~~--~~~d~vid~~g  245 (356)
                      +.+.+...  +++|++|++.|
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHhCCCCEEEECCC
Confidence            33333211  37999999888

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.35  E-value=0.00057  Score=59.44  Aligned_cols=84  Identities=15%  Similarity=0.276  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-cchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-REKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~  231 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++ .++.      +++.+.++ ..+.. ..  .|..+.+++.+.+.+
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~   78 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANI------DETIASMR-ADGGDAAFFAADLATSEACQQLVDE   78 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTH------HHHHHHHH-HTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhH------HHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHH
Confidence            46799999999999999999998899999999988 6554      12223333 33432 12  243333233333332


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|++|.+.|.
T Consensus        79 ~~~~~g~id~vi~~Ag~   95 (258)
T 3afn_B           79 FVAKFGGIDVLINNAGG   95 (258)
T ss_dssp             HHHHHSSCSEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            221  369999999884

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.35  E-value=0.00053  Score=60.92  Aligned_cols=35  Identities=14%  Similarity=0.183  Sum_probs=32.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      .|.++||+||++++|.++++.+...|++|++++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEecc
Confidence            47899999999999999999999999999999876

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.35  E-value=0.00011  Score=63.39  Aligned_cols=39  Identities=23%  Similarity=0.239  Sum_probs=34.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ++.++||+||+|++|.++++.+...|++|++++++.++.
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~   40 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ   40 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccc
Confidence            357899999999999999999999999999999887664

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.35  E-value=0.00078  Score=60.44  Aligned_cols=92  Identities=21%  Similarity=0.292  Sum_probs=70.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      -.|.+|+|+| .|.+|..+++.++.+|++|++.+++.++.          +.+. ++|.. ++++.   ++.+.+     
T Consensus       155 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~----------~~~~-~~g~~-~~~~~---~l~~~l-----  213 (300)
T 2rir_A          155 IHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHL----------ARIT-EMGLV-PFHTD---ELKEHV-----  213 (300)
T ss_dssp             STTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHH-HTTCE-EEEGG---GHHHHS-----
T ss_pred             CCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHH-HCCCe-EEchh---hHHHHh-----
Confidence            4688999999 79999999999999999999999998776          6666 66763 33321   333322     


Q ss_pred             CCccEEEeCCCchHH-HHHHHhhccCCeEEEEcc
Q 018404          235 EGIDIYFEHVGGKML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~  267 (356)
                      ...|+|+.++....+ ...++.+++++.++.++.
T Consensus       214 ~~aDvVi~~~p~~~i~~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          214 KDIDICINTIPSMILNQTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             TTCSEEEECCSSCCBCHHHHTTSCTTCEEEECSS
T ss_pred             hCCCEEEECCChhhhCHHHHHhCCCCCEEEEEeC
Confidence            258999999987433 456788999999999986

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.34  E-value=0.00083  Score=58.97  Aligned_cols=99  Identities=13%  Similarity=0.172  Sum_probs=63.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~  234 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.          .      ... ...|..+.+++.+.+.+...
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~------~~~~~~~Dl~~~~~v~~~~~~~~~   70 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE----------A------KYDHIECDVTNPDQVKASIDHIFK   70 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS----------C------SSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccC----------C------ceEEEEecCCCHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999875431          1      111 12344443233333332211


Q ss_pred             --CCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          235 --EGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       235 --~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                        +++|++|.+.|..                          ..+.+++.+.+  .|++|.++....
T Consensus        71 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  136 (264)
T 2dtx_A           71 EYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA  136 (264)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchh
Confidence              3689999988831                          12344555543  589999987654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.34  E-value=0.00027  Score=60.93  Aligned_cols=96  Identities=17%  Similarity=0.115  Sum_probs=64.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .+|||+||+|++|.++++.+...| ++|+++++++++.          +.+. ..++.. ..|..+.    +.+.+... 
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~----------~~~~-~~~~~~~~~Dl~d~----~~~~~~~~-   87 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI----------HKPY-PTNSQIIMGDVLNH----AALKQAMQ-   87 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS----------CSSC-CTTEEEEECCTTCH----HHHHHHHT-
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh----------cccc-cCCcEEEEecCCCH----HHHHHHhc-
Confidence            589999999999999999999999 8999999998775          3222 212221 1233332    22333222 


Q ss_pred             CccEEEeCCCchH----HHHHHHhhccC--CeEEEEcccc
Q 018404          236 GIDIYFEHVGGKM----LDAVLLNMRLH--GRIAACGMIS  269 (356)
Q Consensus       236 ~~d~vid~~g~~~----~~~~~~~l~~~--G~~v~~g~~~  269 (356)
                      ++|+||.+.|...    .+.+++.++..  +++|.++...
T Consensus        88 ~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           88 GQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             TCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            5899999998732    34455555543  6899888754

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.33  E-value=0.00051  Score=59.69  Aligned_cols=84  Identities=20%  Similarity=0.317  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      ++.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ ..+.. ..  .|..+.+.+.+.+.+.
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   82 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA------NHVVDEIQ-QLGGQAFACRCDITSEQELSALADFA   82 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH------HHHHHHHH-HhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999999988999999999987765      12223333 33432 12  2333332333333322


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  +++|++|.+.|.
T Consensus        83 ~~~~~~~d~vi~~Ag~   98 (255)
T 1fmc_A           83 ISKLGKVDILVNNAGG   98 (255)
T ss_dssp             HHHHSSCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            11  369999999873

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.32  E-value=0.0002  Score=62.00  Aligned_cols=40  Identities=15%  Similarity=0.137  Sum_probs=35.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ..+.+++|+||+|++|.++++.+...|++|++++++.++.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~   44 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE   44 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc
Confidence            3578999999999999999999999999999999887654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.32  E-value=0.0013  Score=55.59  Aligned_cols=92  Identities=17%  Similarity=0.138  Sum_probs=64.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|||+||+|.+|..+++.+...|.+|++++++.++.          +.+.  .+... ..|..+. +. +.+     +++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----------~~~~--~~~~~~~~D~~d~-~~-~~~-----~~~   62 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKI----------TQTH--KDINILQKDIFDL-TL-SDL-----SDQ   62 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHH----------HHHC--SSSEEEECCGGGC-CH-HHH-----TTC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhh----------hhcc--CCCeEEeccccCh-hh-hhh-----cCC
Confidence            599999999999999999999999999999998775          4332  23322 2233332 22 222     259


Q ss_pred             cEEEeCCCch---------HHHHHHHhhccC--CeEEEEcccc
Q 018404          238 DIYFEHVGGK---------MLDAVLLNMRLH--GRIAACGMIS  269 (356)
Q Consensus       238 d~vid~~g~~---------~~~~~~~~l~~~--G~~v~~g~~~  269 (356)
                      |+||.+.|..         ....+++.++..  ++++.++...
T Consensus        63 d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~  105 (221)
T 3ew7_A           63 NVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA  105 (221)
T ss_dssp             SEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred             CEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence            9999999862         335666666654  6888887643

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.31  E-value=0.00065  Score=60.17  Aligned_cols=89  Identities=16%  Similarity=0.181  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhc------cccchhHHHHHHHhhcCCCE---EEecCCcccHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW------LIPMQSQLVELLKNKFGFDD---AFNYKEENDLD  226 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~  226 (356)
                      .|.++||+||+|++|.++++.+...|++|+++++++....      ..+..++..+.++ +.+...   ..|..+.+++.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE-KTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHH-hcCCeEEEEeCCCCCHHHHH
Confidence            4789999999999999999999999999999998632100      0011122223344 445432   22444432333


Q ss_pred             HHHHHhCC--CCccEEEeCCC
Q 018404          227 AALKRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       227 ~~~~~~~~--~~~d~vid~~g  245 (356)
                      +.+.+...  +++|+++++.|
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg  108 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCC
T ss_pred             HHHHHHHHhcCCCCEEEECCC
Confidence            33332211  36999999988

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.31  E-value=0.00033  Score=62.07  Aligned_cols=83  Identities=16%  Similarity=0.304  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC---C-E--EEecCCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF---D-D--AFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~-~--vv~~~~~~~~~~~~  229 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      +++.+.++ +.+.   . .  ..|..+.+++.+.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~v~~~~   77 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERL------EETRQIIL-KSGVSEKQVNSVVADVTTEDGQDQII   77 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-TTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-HcCCCCcceEEEEecCCCHHHHHHHH
Confidence            467999999999999999999999999999999987765      12222333 2232   1 1  12444432333333


Q ss_pred             HHhCC--CCccEEEeCCC
Q 018404          230 KRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g  245 (356)
                      .+...  +++|++|++.|
T Consensus        78 ~~~~~~~g~iD~lv~nAg   95 (280)
T 1xkq_A           78 NSTLKQFGKIDVLVNNAG   95 (280)
T ss_dssp             HHHHHHHSCCCEEEECCC
T ss_pred             HHHHHhcCCCCEEEECCC
Confidence            32211  36999999987

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.31  E-value=0.00018  Score=63.45  Aligned_cols=105  Identities=18%  Similarity=0.186  Sum_probs=67.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~  234 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.          +.+. ..... ..+|..+.+++.+.+.+...
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL----------KALN-LPNTLCAQVDVTDKYTFDTAITRAEK   83 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH----------HTTC-CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHhh-cCCceEEEecCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999987665          3332 11111 12344443233333332211


Q ss_pred             --CCccEEEeCCCch-----------H---------------HHHHHHhhc--cCCeEEEEcccccc
Q 018404          235 --EGIDIYFEHVGGK-----------M---------------LDAVLLNMR--LHGRIAACGMISQY  271 (356)
Q Consensus       235 --~~~d~vid~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~  271 (356)
                        +++|++|++.|..           .               .+.++..+.  ..|++|.+++....
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~  150 (266)
T 3p19_A           84 IYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGK  150 (266)
T ss_dssp             HHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             HCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhC
Confidence              3799999999831           1               122344443  45899999876543

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.30  E-value=0.00095  Score=62.36  Aligned_cols=100  Identities=15%  Similarity=0.159  Sum_probs=73.2

Q ss_pred             HHHHHHHHc-CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc
Q 018404          144 AWAGFYEIC-APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE  222 (356)
Q Consensus       144 A~~~l~~~~-~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~  222 (356)
                      .+.++.+.. ..-.|.+|.|.| .|.+|..+++.++.+|++|+++++++.+.          ..+. ..|...+      
T Consensus       197 lldgi~ratg~~L~GktVgIiG-~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a----------~~A~-~~G~~~~------  258 (436)
T 3h9u_A          197 LVDGIKRATDVMIAGKTACVCG-YGDVGKGCAAALRGFGARVVVTEVDPINA----------LQAA-MEGYQVL------  258 (436)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTCEEC------
T ss_pred             HHHHHHHhcCCcccCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCChhhh----------HHHH-HhCCeec------
Confidence            344443332 334689999999 99999999999999999999999887665          4555 5665321      


Q ss_pred             ccHHHHHHHhCCCCccEEEeCCCc-hHHH-HHHHhhccCCeEEEEcc
Q 018404          223 NDLDAALKRCFPEGIDIYFEHVGG-KMLD-AVLLNMRLHGRIAACGM  267 (356)
Q Consensus       223 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~  267 (356)
                       ++.+.+.     ..|+|+.+.+. ..+. ..++.|+++..++.+|.
T Consensus       259 -sL~eal~-----~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          259 -LVEDVVE-----EAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             -CHHHHTT-----TCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             -CHHHHHh-----hCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence             3443443     48999998887 3343 67888999999999885

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.29  E-value=0.00064  Score=60.47  Aligned_cols=89  Identities=18%  Similarity=0.231  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccc-cchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLI-PMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      .+.++||+||++++|.++++.+...|++|++++++.++..-+ ..-++..+.++ +.+...   ..|..+.+++.+.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE-EAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            478999999999999999999989999999999987642000 00122234444 445421   2244443233333333


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|++|++.|
T Consensus        87 ~~~~~g~id~lvnnAg  102 (285)
T 3sc4_A           87 TVEQFGGIDICVNNAS  102 (285)
T ss_dssp             HHHHHSCCSEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            221  37999999988

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.28  E-value=0.0012  Score=57.99  Aligned_cols=84  Identities=17%  Similarity=0.178  Sum_probs=54.5

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~~  231 (356)
                      .+.++||+||+  |++|.++++.+...|++|++++++. +.      ++..+.+.+..+....  .|..+.+++.+.+.+
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL------KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAE   80 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TT------HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HH------HHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHH
Confidence            46899999998  9999999999999999999999876 21      0111333323343222  344443233344443


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|++|.+.|.
T Consensus        81 ~~~~~g~iD~lv~~Ag~   97 (265)
T 1qsg_A           81 LGKVWPKFDGFVHSIGF   97 (265)
T ss_dssp             HHTTCSSEEEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            322  379999999873

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.28  E-value=0.00067  Score=58.14  Aligned_cols=77  Identities=13%  Similarity=0.164  Sum_probs=53.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~~  234 (356)
                      .++||+||+|++|.+++..+...|++|++++++.++.          +.+.++++..   ...|..+.+.+.+.+.+. .
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-~   70 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL----------STVTNCLSNNVGYRARDLASHQEVEQLFEQL-D   70 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH----------HHHHHTCSSCCCEEECCTTCHHHHHHHHHSC-S
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHHhhccCeEeecCCCHHHHHHHHHHH-h
Confidence            3699999999999999999999999999999998887          6555355432   223444432333333332 2


Q ss_pred             CCccEEEeCCC
Q 018404          235 EGIDIYFEHVG  245 (356)
Q Consensus       235 ~~~d~vid~~g  245 (356)
                      +.+|+++.+.|
T Consensus        71 ~~~d~lv~~Ag   81 (230)
T 3guy_A           71 SIPSTVVHSAG   81 (230)
T ss_dssp             SCCSEEEECCC
T ss_pred             hcCCEEEEeCC
Confidence            34599999988

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.28  E-value=0.00054  Score=60.45  Aligned_cols=83  Identities=12%  Similarity=0.076  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CcchhccccchhHHHHHHHhhc-CCC-EE--EecCCc----ccHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG-SREKVWLIPMQSQLVELLKNKF-GFD-DA--FNYKEE----NDLD  226 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~-g~~-~v--v~~~~~----~~~~  226 (356)
                      ++.++||+||+|++|.++++.+...|++|+++++ +.++.      +++.+.++ +. +.. ..  .|..+.    +.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~   82 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAA------QRLVAELN-AARAGSAVLCKGDLSLSSSLLDCCE   82 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-HHSTTCEEEEECCCSSSTTHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHH------HHHHHHHH-HhcCCceEEEeccCCCccccHHHHH
Confidence            4679999999999999999999999999999998 76654      12223333 22 432 11  233332    2333


Q ss_pred             HHHHHhCC--CCccEEEeCCC
Q 018404          227 AALKRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       227 ~~~~~~~~--~~~d~vid~~g  245 (356)
                      +.+.+...  +++|++|++.|
T Consensus        83 ~~~~~~~~~~g~id~lv~nAg  103 (276)
T 1mxh_A           83 DIIDCSFRAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHhcCCCCEEEECCC
Confidence            33332211  36999999988

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.27  E-value=0.0024  Score=52.55  Aligned_cols=93  Identities=13%  Similarity=0.088  Sum_probs=65.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE-ecCCcccHHHHHHHhCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF-NYKEENDLDAALKRCFP  234 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~~~~~  234 (356)
                      +++|+|.| .|.+|..+++.++.. |.+|+++++++++.          +.++ +.|...+. |..+    .+.+.+.++
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~----------~~~~-~~g~~~~~gd~~~----~~~l~~~~~  102 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAA----------QQHR-SEGRNVISGDATD----PDFWERILD  102 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHH----------HHHH-HTTCCEEECCTTC----HHHHHTBCS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHH----------HHHH-HCCCCEEEcCCCC----HHHHHhccC
Confidence            56899999 799999999999999 99999999999888          7787 77875433 3222    223444422


Q ss_pred             -CCccEEEeCCCch-HHHH---HHHhhccCCeEEEE
Q 018404          235 -EGIDIYFEHVGGK-MLDA---VLLNMRLHGRIAAC  265 (356)
Q Consensus       235 -~~~d~vid~~g~~-~~~~---~~~~l~~~G~~v~~  265 (356)
                       .++|+||.|++.. ....   ..+.+.+..+++..
T Consensus       103 ~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          103 TGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence             3799999999973 3223   33444555576654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.27  E-value=0.00068  Score=58.75  Aligned_cols=78  Identities=18%  Similarity=0.025  Sum_probs=53.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-e--CCcchhccccchhHHHHHHHhhc-CCCEEEecCCcccHHHHHHHh
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGS-A--GSREKVWLIPMQSQLVELLKNKF-GFDDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~-~--~~~~~~~~~~~~~~~~~~~~~~~-g~~~vv~~~~~~~~~~~~~~~  232 (356)
                      +.+++|+||+|++|.++++.+...|++|+++ .  ++.++.          +.+.+++ +. .+.|...-..+.+.+.+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~----------~~~~~~~~~~-~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAER----------QRFESENPGT-IALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH----------HHHHHHSTTE-EECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHH----------HHHHHHhCCC-cccCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999 5  887766          5444354 32 233333222344444443


Q ss_pred             CCCCccEEEeCCCc
Q 018404          233 FPEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~~~~d~vid~~g~  246 (356)
                      . +++|++|++.|.
T Consensus        70 ~-g~iD~lv~~Ag~   82 (244)
T 1zmo_A           70 G-EAIDTIVSNDYI   82 (244)
T ss_dssp             S-SCEEEEEECCCC
T ss_pred             c-CCCCEEEECCCc
Confidence            3 379999999873

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.27  E-value=0.0016  Score=55.21  Aligned_cols=92  Identities=14%  Similarity=-0.008  Sum_probs=63.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|||+||+|.+|..+++.+...|.+|++++++.++.          +.+. ..+...+ .|..+. +. +.+     +++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----------~~~~-~~~~~~~~~D~~d~-~~-~~~-----~~~   63 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA----------ADRL-GATVATLVKEPLVL-TE-ADL-----DSV   63 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHT-CTTSEEEECCGGGC-CH-HHH-----TTC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc----------cccc-CCCceEEecccccc-cH-hhc-----ccC
Confidence            599999999999999999999999999999998776          5444 3344322 233333 22 222     269


Q ss_pred             cEEEeCCCch-----------HHHHHHHhhcc-CCeEEEEccc
Q 018404          238 DIYFEHVGGK-----------MLDAVLLNMRL-HGRIAACGMI  268 (356)
Q Consensus       238 d~vid~~g~~-----------~~~~~~~~l~~-~G~~v~~g~~  268 (356)
                      |+||.+.|..           ....+++.++. ++++|.+++.
T Consensus        64 d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           64 DAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             SEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             CEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence            9999999862           23444555543 4788888654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.27  E-value=0.0025  Score=54.86  Aligned_cols=78  Identities=15%  Similarity=0.216  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc-CCCE-EEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFDD-AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~-vv~~~~~~~~~~~~~~~~  233 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++.++.          +.+.++. +... ..|..+.+.+.+.+.+  
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   73 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL----------VSLAKECPGIEPVCVDLGDWDATEKALGG--   73 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHSTTCEEEECCTTCHHHHHHHHTT--
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHhccCCCcEEecCCCHHHHHHHHHH--
Confidence            467999999999999999999999999999999987765          4444233 3321 2233332122222221  


Q ss_pred             CCCccEEEeCCC
Q 018404          234 PEGIDIYFEHVG  245 (356)
Q Consensus       234 ~~~~d~vid~~g  245 (356)
                      .+++|++|.+.|
T Consensus        74 ~~~id~vi~~Ag   85 (244)
T 1cyd_A           74 IGPVDLLVNNAA   85 (244)
T ss_dssp             CCCCSEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence            136899999988

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.26  E-value=0.00049  Score=60.90  Aligned_cols=83  Identities=20%  Similarity=0.217  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~~~~  233 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++.++.      +++.+.+. +.+-...  .|..+.+++.+.+.+..
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~  100 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEAC------ADTATRLS-AYGDCQAIPADLSSEAGARRLAQALG  100 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHH------HHHHHHHT-TSSCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHH-hcCceEEEEeeCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999987765      11112222 2231111  23333323333333221


Q ss_pred             --CCCccEEEeCCC
Q 018404          234 --PEGIDIYFEHVG  245 (356)
Q Consensus       234 --~~~~d~vid~~g  245 (356)
                        .+++|++|++.|
T Consensus       101 ~~~g~iD~lvnnAg  114 (276)
T 2b4q_A          101 ELSARLDILVNNAG  114 (276)
T ss_dssp             HHCSCCSEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence              137999999988

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.26  E-value=0.00068  Score=59.48  Aligned_cols=83  Identities=23%  Similarity=0.392  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCc-hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-C-E--EEecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASG-AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-D-D--AFNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g-~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~-~--vv~~~~~~~~~~~~~  230 (356)
                      .+.++||+||+| ++|.++++.+...|++|++++++.++.      +++.+.++ +.+. . .  ..|..+.+++.+.+.
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRL------GETRDQLA-DLGLGRVEAVVCDVTSTEAVDALIT   93 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-TTCSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHH------HHHHHHHH-hcCCCceEEEEeCCCCHHHHHHHHH
Confidence            478999999985 899999999989999999999988775      22223333 3332 1 1  224444323333333


Q ss_pred             HhCC--CCccEEEeCCC
Q 018404          231 RCFP--EGIDIYFEHVG  245 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g  245 (356)
                      +...  +++|++|.+.|
T Consensus        94 ~~~~~~g~id~li~~Ag  110 (266)
T 3o38_A           94 QTVEKAGRLDVLVNNAG  110 (266)
T ss_dssp             HHHHHHSCCCEEEECCC
T ss_pred             HHHHHhCCCcEEEECCC
Confidence            3211  36999999998

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.25  E-value=0.00048  Score=58.80  Aligned_cols=36  Identities=8%  Similarity=0.017  Sum_probs=31.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      .+.++||+||++++|.+.++.+...|++|++++++.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~   40 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT   40 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc
Confidence            467899999999999999998888899999988663

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.24  E-value=0.0032  Score=49.40  Aligned_cols=94  Identities=16%  Similarity=0.089  Sum_probs=67.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      .++|+|.| .|.+|..+++.++..|.+|+++++++++.          +.++ +.|...+. .+.  .-.+.+++..-..
T Consensus         7 ~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~----------~~~~-~~g~~~i~-gd~--~~~~~l~~a~i~~   71 (140)
T 3fwz_A            7 CNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRV----------DELR-ERGVRAVL-GNA--ANEEIMQLAHLEC   71 (140)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHH----------HHHH-HTTCEEEE-SCT--TSHHHHHHTTGGG
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHH----------HHHH-HcCCCEEE-CCC--CCHHHHHhcCccc
Confidence            46899999 79999999999999999999999999998          8888 77775332 221  1122344332227


Q ss_pred             ccEEEeCCCchH----HHHHHHhhccCCeEEEE
Q 018404          237 IDIYFEHVGGKM----LDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       237 ~d~vid~~g~~~----~~~~~~~l~~~G~~v~~  265 (356)
                      +|+++-+++.+.    +-...+.+.+..+++..
T Consensus        72 ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           72 AKWLILTIPNGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             CSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             CCEEEEECCChHHHHHHHHHHHHHCCCCeEEEE
Confidence            899999999742    22445566677777654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.24  E-value=0.00062  Score=59.43  Aligned_cols=78  Identities=14%  Similarity=0.179  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~~~~  233 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.          +..+ +++. ..  .|..+.+++.+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~-~~~~-~~~~~D~~~~~~~~~~~~~~~   72 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK----------EVAE-AIGG-AFFQVDLEDERERVRFVEEAA   72 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH----------HHHH-HHTC-EEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHH----------HHHH-HhhC-CEEEeeCCCHHHHHHHHHHHH
Confidence            467999999999999999999999999999999876543          3333 4332 22  24444323333333221


Q ss_pred             C--CCccEEEeCCC
Q 018404          234 P--EGIDIYFEHVG  245 (356)
Q Consensus       234 ~--~~~d~vid~~g  245 (356)
                      .  +++|++|++.|
T Consensus        73 ~~~g~iD~lv~~Ag   86 (256)
T 2d1y_A           73 YALGRVDVLVNNAA   86 (256)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence            1  36999999988

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.24  E-value=0.00087  Score=57.92  Aligned_cols=85  Identities=22%  Similarity=0.431  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++.++.      +++.+.+.+..+.. ..  .|..+.+++.+.+.+.
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERA------KAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEI   79 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHH------HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHH------HHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            467999999999999999999888999999999987765      11222232113432 12  2333332333333322


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  -+++|++|.+.|.
T Consensus        80 ~~~~~~~d~vi~~Ag~   95 (248)
T 2pnf_A           80 YNLVDGIDILVNNAGI   95 (248)
T ss_dssp             HHHSSCCSEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            1  1369999999883

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.23  E-value=0.00086  Score=58.16  Aligned_cols=84  Identities=23%  Similarity=0.297  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-chhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-EKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~  231 (356)
                      .+.++||+||+|++|.++++.+...|++|+++.+.. ++.      +++.+.++ ..+... .  .|..+.+++.+.+.+
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~   75 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKA------EAVVEEIK-AKGVDSFAIQANVADADEVKAMIKE   75 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-HTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHH
Confidence            467999999999999999999999999999888744 333      22334444 445432 1  233343233333332


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|+++.+.|.
T Consensus        76 ~~~~~g~id~lv~nAg~   92 (246)
T 3osu_A           76 VVSQFGSLDVLVNNAGI   92 (246)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            211  369999999883

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.22  E-value=0.00063  Score=58.96  Aligned_cols=79  Identities=20%  Similarity=0.181  Sum_probs=52.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc----CCC-EE--EecCCcccHHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF----GFD-DA--FNYKEENDLDAAL  229 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~-~v--v~~~~~~~~~~~~  229 (356)
                      +.+++|+||+|++|.+++..+...|++|++++++.++.          +.+.+++    +.. ..  .|..+.+++.+.+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   71 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETL----------EETARTHWHAYADKVLRVRADVADEGDVNAAI   71 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHSTTTGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            56899999999999999999999999999999987765          3333222    321 11  2333332333333


Q ss_pred             HHhCC--CCccEEEeCCC
Q 018404          230 KRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g  245 (356)
                      .+...  +++|++|.+.|
T Consensus        72 ~~~~~~~~~id~li~~Ag   89 (250)
T 2cfc_A           72 AATMEQFGAIDVLVNNAG   89 (250)
T ss_dssp             HHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHhCCCCEEEECCC
Confidence            32211  36999999887

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.21  E-value=0.0032  Score=55.92  Aligned_cols=81  Identities=19%  Similarity=0.206  Sum_probs=54.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~  233 (356)
                      -+|.+++|+||+|++|.+++..+...|++|+++.++.++.      +++.+.+....+.. ...|..+. +   .+.+..
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~------~~l~~~~~~~~~~~~~~~D~~~~-~---~~~~~~  186 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKA------QAAADSVNKRFKVNVTAAETADD-A---SRAEAV  186 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH------HHHHHHHHHHHTCCCEEEECCSH-H---HHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHH------HHHHHHHHhcCCcEEEEecCCCH-H---HHHHHH
Confidence            3678999999999999999999999999999999987765      22222232112332 23454442 1   233322


Q ss_pred             CCCccEEEeCCCc
Q 018404          234 PEGIDIYFEHVGG  246 (356)
Q Consensus       234 ~~~~d~vid~~g~  246 (356)
                      . .+|++++|+|.
T Consensus       187 ~-~~DvlVn~ag~  198 (287)
T 1lu9_A          187 K-GAHFVFTAGAI  198 (287)
T ss_dssp             T-TCSEEEECCCT
T ss_pred             H-hCCEEEECCCc
Confidence            2 48999999973

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=97.20  E-value=0.0036  Score=53.37  Aligned_cols=105  Identities=12%  Similarity=0.109  Sum_probs=70.2

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAA  228 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~  228 (356)
                      .+.+++.+||=.|  .|.|..++.+++.+  +.+|++++.+++..      +.+.+.++ +.|.. .-+..... +..+.
T Consensus        52 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~------~~a~~~~~-~~g~~~~~i~~~~g-da~~~  121 (221)
T 3dr5_A           52 TNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQ------RQAKALFR-EAGYSPSRVRFLLS-RPLDV  121 (221)
T ss_dssp             SCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHH------HHHHHHHH-HTTCCGGGEEEECS-CHHHH
T ss_pred             hCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCcCcEEEEEc-CHHHH
Confidence            3344556999888  56799999999987  67999999998876      23334444 45654 22333332 44444


Q ss_pred             HHHhCCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          229 LKRCFPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +.....+.||+||-....    ..+..+++.|+|+|.++.-.
T Consensus       122 l~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn  163 (221)
T 3dr5_A          122 MSRLANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD  163 (221)
T ss_dssp             GGGSCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred             HHHhcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence            444334589999865443    36788999999999988643

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.20  E-value=0.0011  Score=57.56  Aligned_cols=109  Identities=18%  Similarity=0.222  Sum_probs=65.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHH---H
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLD---A  227 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~---~  227 (356)
                      -++.+++|+||++++|.++++.+...|++|+++. ++.++.      ++..+.++ +.+.. ..  .|..+..+..   +
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~   77 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA------EETVYEIQ-SNGGSAFSIGANLESLHGVEALYS   77 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHH------HHHHHHHH-HTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHH------HHHHHHHH-hcCCceEEEecCcCCHHHHHHHHH
Confidence            3578999999999999999999999999998875 444433      22223333 33432 11  2333321222   2


Q ss_pred             HHHHhC----C-CCccEEEeCCCch-----------H---------------HHHHHHhhccCCeEEEEccccc
Q 018404          228 ALKRCF----P-EGIDIYFEHVGGK-----------M---------------LDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       228 ~~~~~~----~-~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      .+.+..    + +.+|++|.+.|..           .               .+.+++.++++|+++.++....
T Consensus        78 ~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           78 SLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             HHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence            222111    1 2599999998831           1               1223334456789999987554

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.19  E-value=0.0009  Score=58.94  Aligned_cols=85  Identities=20%  Similarity=0.203  Sum_probs=53.7

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS-AGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAAL  229 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~  229 (356)
                      ..++.+|||+||+|++|.++++.+...|++|+++ .++.+..      +++.+.++ +.+.. ..  .|..+.+++...+
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~   95 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAA------DAVVAAIT-ESGGEAVAIPGDVGNAADIAAMF   95 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-HTTCEEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHH------HHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHH
Confidence            3467899999999999999999999999999877 5555544      22223333 34432 12  2444432333333


Q ss_pred             HHhCC--CCccEEEeCCC
Q 018404          230 KRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g  245 (356)
                      .+...  +++|++|.+.|
T Consensus        96 ~~~~~~~g~id~li~nAg  113 (272)
T 4e3z_A           96 SAVDRQFGRLDGLVNNAG  113 (272)
T ss_dssp             HHHHHHHSCCCEEEECCC
T ss_pred             HHHHHhCCCCCEEEECCC
Confidence            33221  36999999988

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.19  E-value=0.0008  Score=60.12  Aligned_cols=84  Identities=10%  Similarity=0.225  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+||+|++|.+++..+...|++|++++++.++.      +++.+.+++..+.. ..  .|..+.+++...+.+.
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   98 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVL------KATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL   98 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999987765      11222233111432 12  2444432333333322


Q ss_pred             C--CCCccEEEeCCC
Q 018404          233 F--PEGIDIYFEHVG  245 (356)
Q Consensus       233 ~--~~~~d~vid~~g  245 (356)
                      .  .+.+|++|.+.|
T Consensus        99 ~~~~g~id~li~~Ag  113 (302)
T 1w6u_A           99 IKVAGHPNIVINNAA  113 (302)
T ss_dssp             HHHTCSCSEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            1  237899999988

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.19  E-value=0.00074  Score=58.56  Aligned_cols=77  Identities=21%  Similarity=0.379  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC-CC-EEEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG-FD-DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~~~~~~  233 (356)
                      ++.+++|+||+|++|.++++.+...|++|++++++.++.          +.+. +++ .. ...|..+.+.+. .+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~-~~~~~~~~~~D~~~~~~~~-~~~~~~   72 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL----------QELE-KYPGIQTRVLDVTKKKQID-QFANEV   72 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------GGGG-GSTTEEEEECCTTCHHHHH-HHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHH-hccCceEEEeeCCCHHHHH-HHHHHh
Confidence            478999999999999999999999999999999987765          4333 332 11 123444431222 333222


Q ss_pred             CCCccEEEeCCC
Q 018404          234 PEGIDIYFEHVG  245 (356)
Q Consensus       234 ~~~~d~vid~~g  245 (356)
                       +++|++|++.|
T Consensus        73 -~~id~lv~~Ag   83 (246)
T 2ag5_A           73 -ERLDVLFNVAG   83 (246)
T ss_dssp             -SCCSEEEECCC
T ss_pred             -CCCCEEEECCc
Confidence             36999999988

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.19  E-value=0.0011  Score=58.13  Aligned_cols=86  Identities=13%  Similarity=0.136  Sum_probs=55.4

Q ss_pred             CCCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHHHH
Q 018404          154 PKKGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDAAL  229 (356)
Q Consensus       154 ~~~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~  229 (356)
                      ..++.+|||+||+  +++|.++++.+...|++|++++++....      +.+.+... +.+...  ..|..+.+++...+
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~   83 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK------DRITEFAA-EFGSELVFPCDVADDAQIDALF   83 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH------HHHHHHHH-HTTCCCEEECCTTCHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH------HHHHHHHH-HcCCcEEEECCCCCHHHHHHHH
Confidence            4567899999998  9999999999999999999999885432      12222223 444322  23444432333333


Q ss_pred             HHhC--CCCccEEEeCCCc
Q 018404          230 KRCF--PEGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~--~~~~d~vid~~g~  246 (356)
                      .+..  .+++|++|.+.|.
T Consensus        84 ~~~~~~~g~id~lv~nAg~  102 (271)
T 3ek2_A           84 ASLKTHWDSLDGLVHSIGF  102 (271)
T ss_dssp             HHHHHHCSCEEEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCcc
Confidence            3221  1379999999873

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.18  E-value=0.0011  Score=59.01  Aligned_cols=39  Identities=15%  Similarity=0.072  Sum_probs=35.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA-GSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~-~~~~~~  194 (356)
                      .+.++||+||+|++|.++++.+...|++|++++ ++.++.
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~   47 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEA   47 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHH
Confidence            467999999999999999999999999999999 887765

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.18  E-value=0.00074  Score=61.18  Aligned_cols=84  Identities=17%  Similarity=0.253  Sum_probs=54.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC----------cchhccccchhHHHHHHHhhcCCCEE---EecCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS----------REKVWLIPMQSQLVELLKNKFGFDDA---FNYKE  221 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~  221 (356)
                      -.|.++||+||+|++|.++++.+...|++|++++++          .+..      +++.+.+. +.+....   .|..+
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dv~d   97 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAA------QSVVDEIT-AAGGEAVADGSNVAD   97 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHH------HHHHHHHH-HTTCEEEEECCCTTS
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHH------HHHHHHHH-hcCCcEEEEECCCCC
Confidence            357899999999999999999999999999999876          2332      22334444 4444222   23333


Q ss_pred             cccHHHHHHHhCC--CCccEEEeCCC
Q 018404          222 ENDLDAALKRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       222 ~~~~~~~~~~~~~--~~~d~vid~~g  245 (356)
                      .+++.+.+.+...  +++|++|.+.|
T Consensus        98 ~~~v~~~~~~~~~~~g~iD~lv~nAg  123 (322)
T 3qlj_A           98 WDQAAGLIQTAVETFGGLDVLVNNAG  123 (322)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            2233333332211  37999999998

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.17  E-value=0.0023  Score=54.17  Aligned_cols=96  Identities=14%  Similarity=0.150  Sum_probs=63.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      +|+|+||+|.+|..+++.+...|++|++++++.++.          +.+   .+. .++..+-. +..+.+.+... ++|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----------~~~---~~~-~~~~~D~~-d~~~~~~~~~~-~~d   65 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV----------PQY---NNV-KAVHFDVD-WTPEEMAKQLH-GMD   65 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS----------CCC---TTE-EEEECCTT-SCHHHHHTTTT-TCS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch----------hhc---CCc-eEEEeccc-CCHHHHHHHHc-CCC
Confidence            699999999999999999999999999999998775          211   122 22222111 21234444433 699


Q ss_pred             EEEeCCCch----------HHHHHHHhhccC--CeEEEEccccc
Q 018404          239 IYFEHVGGK----------MLDAVLLNMRLH--GRIAACGMISQ  270 (356)
Q Consensus       239 ~vid~~g~~----------~~~~~~~~l~~~--G~~v~~g~~~~  270 (356)
                      +||.+.|..          .....++.++..  +++|.++....
T Consensus        66 ~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  109 (219)
T 3dqp_A           66 AIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS  109 (219)
T ss_dssp             EEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred             EEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence            999999852          133444444443  58998887543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.17  E-value=0.0012  Score=59.15  Aligned_cols=84  Identities=15%  Similarity=0.237  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhh----cCCC-EE--EecCCcccHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNK----FGFD-DA--FNYKEENDLDAA  228 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~-~v--v~~~~~~~~~~~  228 (356)
                      .+.+|+|+||+|++|.++++.+...|++|++++++.++.      +++.+.++..    .+.. ..  .|..+.+.+...
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~   90 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERL------KSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL   90 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence            467999999999999999999999999999999987765      1222333311    2222 11  233333233333


Q ss_pred             HHHhCC--CCccEEEeCCC
Q 018404          229 LKRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       229 ~~~~~~--~~~d~vid~~g  245 (356)
                      +.+...  +++|++|.+.|
T Consensus        91 ~~~~~~~~g~id~li~~Ag  109 (303)
T 1yxm_A           91 VKSTLDTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHcCCCCEEEECCC
Confidence            333211  36999999988

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.16  E-value=0.00071  Score=59.61  Aligned_cols=77  Identities=18%  Similarity=0.181  Sum_probs=51.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHh
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~  232 (356)
                      -.++++|||+||+|++|.++++.+...|++|++++++.+..          .    . ... ..+|..+.+++.+.+.+.
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~----~-~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------V----N-VSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------T----T-SSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------c----C-ceeEEEecCCCHHHHHHHHHHH
Confidence            35688999999999999999999999999999999886653          1    1 111 123444432333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|++|.+.|
T Consensus        76 ~~~~g~iD~lv~nAg   90 (269)
T 3vtz_A           76 TKKYGRIDILVNNAG   90 (269)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  37999999988

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.16  E-value=0.001  Score=60.36  Aligned_cols=112  Identities=19%  Similarity=0.219  Sum_probs=67.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~~  233 (356)
                      +.++||+||+|++|.++++.+...|++|++++++.... ..+.-+++.+.++ ..+.. .  .+|..+.+.+.+.+.+..
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r-~~~~~~~l~~~~~-~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGR-NASNVEAIAGFAR-DNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTT-THHHHHHHHHHHH-HHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCccccc-CHHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            57999999999999999999999999999998763211 0011122233333 34432 1  224444323333333322


Q ss_pred             C--CCccEEEeCCCc-----------h---------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          234 P--EGIDIYFEHVGG-----------K---------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       234 ~--~~~d~vid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      .  +++|++|++.|.           +               ..+.++..|+  ..|++|.+++...
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~  149 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSS  149 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchh
Confidence            1  379999999982           1               1133344443  4589999887654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.16  E-value=0.0013  Score=58.26  Aligned_cols=84  Identities=8%  Similarity=0.138  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-cchhccccchhHHHHHHHhhc-CCCE-E--EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-REKVWLIPMQSQLVELLKNKF-GFDD-A--FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~-g~~~-v--v~~~~~~~~~~~~~  230 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++ .++.      +++.+.++ +. +... .  .|..+.+++.+.+.
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~------~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~   96 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEI------RTVTDEVA-GLSSGTVLHHPADMTKPSEIADMMA   96 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHH------HHHHHHHH-TTCSSCEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHH------HHHHHHHh-hccCCcEEEEeCCCCCHHHHHHHHH
Confidence            46899999999999999999999999999999984 3333      22223333 22 3221 1  23344323333333


Q ss_pred             HhC--CCCccEEEeCCCc
Q 018404          231 RCF--PEGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~--~~~~d~vid~~g~  246 (356)
                      +..  -+++|+++.+.|.
T Consensus        97 ~~~~~~g~iD~lv~nAg~  114 (281)
T 3v2h_A           97 MVADRFGGADILVNNAGV  114 (281)
T ss_dssp             HHHHHTSSCSEEEECCCC
T ss_pred             HHHHHCCCCCEEEECCCC
Confidence            221  1379999999883

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.14  E-value=0.0013  Score=59.80  Aligned_cols=39  Identities=15%  Similarity=0.072  Sum_probs=35.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA-GSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~-~~~~~~  194 (356)
                      .+.++||+||+|++|.++++.+...|++|++++ ++.++.
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~   84 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEA   84 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence            468999999999999999999999999999999 887765

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.13  E-value=0.0013  Score=57.34  Aligned_cols=84  Identities=20%  Similarity=0.219  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH---cCCEEEEEeCCcchhccccchhHHHHHHHhhc-CCC-E--EEecCCcccHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKL---MGCYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFD-D--AFNYKEENDLDAA  228 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~---~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~-~--vv~~~~~~~~~~~  228 (356)
                      ++.++||+||+|++|.++++.+..   .|++|++++++.++.      +++.+.+++.. +.. .  ..|..+.+++.+.
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~   78 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESML------RQLKEELGAQQPDLKVVLAAADLGTEAGVQRL   78 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHH------HHHHHHHHHHCTTSEEEEEECCTTSHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHH------HHHHHHHHhhCCCCeEEEEecCCCCHHHHHHH
Confidence            367899999999999999988777   899999999987765      22223333111 321 1  1244443233333


Q ss_pred             HHHh----CCCCcc--EEEeCCC
Q 018404          229 LKRC----FPEGID--IYFEHVG  245 (356)
Q Consensus       229 ~~~~----~~~~~d--~vid~~g  245 (356)
                      +.+.    ..+++|  ++|++.|
T Consensus        79 ~~~~~~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           79 LSAVRELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HHHHHHSCCCTTCCEEEEEECCC
T ss_pred             HHHHHhccccccCCccEEEECCc
Confidence            4333    223577  9999877

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.11  E-value=0.0016  Score=56.88  Aligned_cols=84  Identities=18%  Similarity=0.166  Sum_probs=53.5

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~~  231 (356)
                      .+.+++|+||+  |++|.++++.+...|++|++++++.+..      +.+ +.+.++.+....  .|..+.+++.+.+.+
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~-~~l~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLR------PEA-EKLAEALGGALLFRADVTQDEELDALFAG   79 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGH------HHH-HHHHHHTTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH------HHH-HHHHHhcCCcEEEECCCCCHHHHHHHHHH
Confidence            46799999998  9999999988888899999999886411      011 334323443222  244443233333332


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|++|++.|.
T Consensus        80 ~~~~~g~iD~lv~~Ag~   96 (261)
T 2wyu_A           80 VKEAFGGLDYLVHAIAF   96 (261)
T ss_dssp             HHHHHSSEEEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            211  379999999884

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.11  E-value=0.0042  Score=58.00  Aligned_cols=94  Identities=12%  Similarity=0.052  Sum_probs=60.4

Q ss_pred             cCC-CCCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCcchhccc------cchhHHHHHHHhhcCCCE-EE--ecC
Q 018404          152 CAP-KKGEYIYVSAASGAVGQLVGQFAKL-MGCYVVGSAGSREKVWLI------PMQSQLVELLKNKFGFDD-AF--NYK  220 (356)
Q Consensus       152 ~~~-~~g~~VlI~ga~g~vG~~ai~la~~-~g~~Vi~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~-vv--~~~  220 (356)
                      ..+ +.++++||+||++|+|++++..+.. .|++|+++.++.+...-.      .+.+++.+.++ +.|... .+  |-.
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-AAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHH-hcCCcEEEEEecCC
Confidence            455 4578999999999999999888877 999999998876653000      01223445555 666532 22  333


Q ss_pred             Ccc---cHHHHHHHhCCCCccEEEeCCCc
Q 018404          221 EEN---DLDAALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       221 ~~~---~~~~~~~~~~~~~~d~vid~~g~  246 (356)
                      +.+   .+.+.+.+..+|++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            321   23344444443579999998875

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.10  E-value=0.0011  Score=57.09  Aligned_cols=82  Identities=12%  Similarity=0.119  Sum_probs=52.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-------EEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-------YVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLD  226 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-------~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~  226 (356)
                      +.+|+|+||+|++|.++++.+...|+       +|++++++.++.      +++.+.++ ..+.. ..  .|..+.+.+.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~D~~~~~~v~   74 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADL------EKISLECR-AEGALTDTITADISDMADVR   74 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHH------HHHHHHHH-TTTCEEEEEECCTTSHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHH------HHHHHHHH-ccCCeeeEEEecCCCHHHHH
Confidence            56899999999999999988888899       999999987765      12222222 22432 12  2333332333


Q ss_pred             HHHHHhC--CCCccEEEeCCC
Q 018404          227 AALKRCF--PEGIDIYFEHVG  245 (356)
Q Consensus       227 ~~~~~~~--~~~~d~vid~~g  245 (356)
                      ..+.+..  .+++|++|.+.|
T Consensus        75 ~~~~~~~~~~g~id~li~~Ag   95 (244)
T 2bd0_A           75 RLTTHIVERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHHHHHHHHTSCCSEEEECCC
T ss_pred             HHHHHHHHhCCCCCEEEEcCC
Confidence            3333221  136999999988

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.09  E-value=0.0012  Score=57.57  Aligned_cols=85  Identities=13%  Similarity=0.147  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.      .+..+.+.++.+...   ..|..+.+.+...+.+.
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   86 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA------VEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   86 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH------HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhh------HHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHH
Confidence            467899999999999999999888999999999865543      111122221334321   22444432333333332


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  -+++|++|.+.|.
T Consensus        87 ~~~~~~id~li~~Ag~  102 (265)
T 1h5q_A           87 DADLGPISGLIANAGV  102 (265)
T ss_dssp             HHHSCSEEEEEECCCC
T ss_pred             HHhcCCCCEEEECCCc
Confidence            1  1369999999883

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.09  E-value=0.0012  Score=56.98  Aligned_cols=80  Identities=16%  Similarity=0.175  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhc-CCC-E--EEecCCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFD-D--AFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~-~--vv~~~~~~~~~~~~  229 (356)
                      ++.+|+|+||+|++|.++++.+...|  ++|++++++.++.          +.+. +. +.. .  ..|..+.+.+.+.+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~----------~~l~-~~~~~~~~~~~~D~~~~~~~~~~~   70 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA----------TELK-SIKDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC----------HHHH-TCCCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHH----------HHHH-hccCCceEEEEeecCCHHHHHHHH
Confidence            36789999999999999999999999  9999999998887          6666 44 222 1  22333321232223


Q ss_pred             H---HhCCC-CccEEEeCCCc
Q 018404          230 K---RCFPE-GIDIYFEHVGG  246 (356)
Q Consensus       230 ~---~~~~~-~~d~vid~~g~  246 (356)
                      .   +..+. ++|++|.+.|.
T Consensus        71 ~~~~~~~g~~~id~li~~Ag~   91 (250)
T 1yo6_A           71 SKVGEIVGSDGLSLLINNAGV   91 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCC
T ss_pred             HHHHHhcCCCCCcEEEECCcc
Confidence            2   22221 69999998873

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.09  E-value=0.00066  Score=59.21  Aligned_cols=80  Identities=23%  Similarity=0.268  Sum_probs=52.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      |+++||+||++++|.++++.+...  |++|+.+.++.++.          +.+.++++...   ..|..+.+++.+.+.+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   71 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPL----------KKLKEKYGDRFFYVVGDITEDSVLKQLVNA   71 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHH----------HHHHHHHGGGEEEEESCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHH----------HHHHHHhCCceEEEECCCCCHHHHHHHHHH
Confidence            578999999999999988766665  57999999988876          55553554321   1244443233333332


Q ss_pred             hCC--CCccEEEeCCCc
Q 018404          232 CFP--EGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~  246 (356)
                      ...  +++|+++++.|.
T Consensus        72 ~~~~~g~id~lvnnAg~   88 (254)
T 3kzv_A           72 AVKGHGKIDSLVANAGV   88 (254)
T ss_dssp             HHHHHSCCCEEEEECCC
T ss_pred             HHHhcCCccEEEECCcc
Confidence            211  379999998884

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.09  E-value=0.001  Score=57.24  Aligned_cols=98  Identities=11%  Similarity=0.093  Sum_probs=62.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~  233 (356)
                      +.+|+|+||+|++|.++++.+...|+  +|++++++.++.          +... .-+... ..|..+.    +.+.+..
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~----------~~~~-~~~~~~~~~D~~d~----~~~~~~~   82 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF----------DEEA-YKNVNQEVVDFEKL----DDYASAF   82 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC----------CSGG-GGGCEEEECCGGGG----GGGGGGG
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCc----------cccc-cCCceEEecCcCCH----HHHHHHh
Confidence            57899999999999999999988999  999999987764          2221 112211 1232222    1233322


Q ss_pred             CCCccEEEeCCCchH---------------HHHHHHhhcc--CCeEEEEccccc
Q 018404          234 PEGIDIYFEHVGGKM---------------LDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       234 ~~~~d~vid~~g~~~---------------~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      . ++|+||.|.|...               ...+++.+.+  .+++|.++....
T Consensus        83 ~-~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           83 Q-GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             S-SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             c-CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            2 6999999998521               1233334433  368999887554

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.08  E-value=0.00081  Score=59.61  Aligned_cols=95  Identities=15%  Similarity=0.098  Sum_probs=64.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      +|||+||+|.+|..+++.+... |.+|++++++.++.          ..+. ..+... ..|..+.    +.+.+... +
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~----------~~~~-~~~v~~~~~D~~d~----~~l~~~~~-~   65 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV----------PDDW-RGKVSVRQLDYFNQ----ESMVEAFK-G   65 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS----------CGGG-BTTBEEEECCTTCH----HHHHHHTT-T
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH----------HHhh-hCCCEEEEcCCCCH----HHHHHHHh-C
Confidence            4899999999999999888887 89999999998876          4443 334432 2244332    23444333 6


Q ss_pred             ccEEEeCCCc--------hHHHHHHHhhccC--CeEEEEcccc
Q 018404          237 IDIYFEHVGG--------KMLDAVLLNMRLH--GRIAACGMIS  269 (356)
Q Consensus       237 ~d~vid~~g~--------~~~~~~~~~l~~~--G~~v~~g~~~  269 (356)
                      +|+||.+.|.        ......++.++..  +++|.++..+
T Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           66 MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            9999999885        1234455555544  4888887754

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.08  E-value=0.0013  Score=56.90  Aligned_cols=95  Identities=18%  Similarity=0.251  Sum_probs=60.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      .+|||+||+|++|..++..+...|++|++++++.++.          +     ...  ..|..+.+.+.+.+.++ .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~-----~~~--~~D~~~~~~~~~~~~~~-~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADI----------E-----ADL--STPGGRETAVAAVLDRC-GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------E-----CCT--TSHHHHHHHHHHHHHHH-TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHc----------c-----ccc--cCCcccHHHHHHHHHHc-CCCc
Confidence            3799999999999999998888999999999887654          1     000  01111111223333333 2468


Q ss_pred             cEEEeCCCc-h------------------HHHHHHHhhccC--CeEEEEccccc
Q 018404          238 DIYFEHVGG-K------------------MLDAVLLNMRLH--GRIAACGMISQ  270 (356)
Q Consensus       238 d~vid~~g~-~------------------~~~~~~~~l~~~--G~~v~~g~~~~  270 (356)
                      |++|.+.|. .                  .++.+.+.+...  ++++.+++...
T Consensus        64 d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~  117 (255)
T 2dkn_A           64 DGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA  117 (255)
T ss_dssp             SEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             cEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence            999998874 1                  123334444433  89999887544

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.08  E-value=0.004  Score=56.37  Aligned_cols=82  Identities=13%  Similarity=0.093  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEE--ecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAF--NYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv--~~~~~~~~~~~~~~~  232 (356)
                      .+.+|||+||+|.+|..+++.+...|++|++++++.+..      .+..+.+....+.. ..+  |..+.+.+.+.+.+ 
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSK------REAIARIEKITGKTPAFHETDVSDERALARIFDA-   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSC------THHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcch------HHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-
Confidence            456899999999999999999999999999999876654      11112222112321 222  33332133333332 


Q ss_pred             CCCCccEEEeCCCc
Q 018404          233 FPEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~~~~d~vid~~g~  246 (356)
                        +++|+||.+.|.
T Consensus        77 --~~~d~vih~A~~   88 (341)
T 3enk_A           77 --HPITAAIHFAAL   88 (341)
T ss_dssp             --SCCCEEEECCCC
T ss_pred             --cCCcEEEECccc
Confidence              369999999984

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.08  E-value=0.0013  Score=54.76  Aligned_cols=95  Identities=15%  Similarity=0.132  Sum_probs=61.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE--ecCCcccHHHHHHHhCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF--NYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~~~~~~~  235 (356)
                      .+|+|+||+|.+|..+++.+...|.+|+++++++++.          +.+. ..+. .++  |..+.    +.+.+... 
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~----------~~~~-~~~~-~~~~~D~~~~----~~~~~~~~-   66 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL----------PSEG-PRPA-HVVVGDVLQA----ADVDKTVA-   66 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS----------CSSS-CCCS-EEEESCTTSH----HHHHHHHT-
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc----------cccc-CCce-EEEEecCCCH----HHHHHHHc-
Confidence            5899999999999999999988999999999987765          2211 1122 222  33322    22333222 


Q ss_pred             CccEEEeCCCch-----------HHHHHHHhhcc--CCeEEEEcccc
Q 018404          236 GIDIYFEHVGGK-----------MLDAVLLNMRL--HGRIAACGMIS  269 (356)
Q Consensus       236 ~~d~vid~~g~~-----------~~~~~~~~l~~--~G~~v~~g~~~  269 (356)
                      ++|+||.+.|..           .....++.+.+  -++++.++...
T Consensus        67 ~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~  113 (206)
T 1hdo_A           67 GQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF  113 (206)
T ss_dssp             TCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             CCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence            489999999852           13344444433  35888887654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.07  E-value=0.00076  Score=57.44  Aligned_cols=95  Identities=16%  Similarity=0.106  Sum_probs=61.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      .+|||+||+|.+|..+++.+...|.+|++++++.++.          +.+.  .+... ..|..+.    +.+.+... +
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~--~~~~~~~~Dl~d~----~~~~~~~~-~   67 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI----------KIEN--EHLKVKKADVSSL----DEVCEVCK-G   67 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC----------CCCC--TTEEEECCCTTCH----HHHHHHHT-T
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc----------hhcc--CceEEEEecCCCH----HHHHHHhc-C
Confidence            5899999999999999999999999999999998775          2111  11111 1233332    22333222 5


Q ss_pred             ccEEEeCCCch------------HHHHHHHhhccC--CeEEEEcccc
Q 018404          237 IDIYFEHVGGK------------MLDAVLLNMRLH--GRIAACGMIS  269 (356)
Q Consensus       237 ~d~vid~~g~~------------~~~~~~~~l~~~--G~~v~~g~~~  269 (356)
                      +|+||.+.|..            .....++.++..  +++|.++..+
T Consensus        68 ~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           68 ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            89999998853            223445555544  4899887643

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.06  E-value=0.00091  Score=57.40  Aligned_cols=104  Identities=13%  Similarity=0.096  Sum_probs=68.8

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDL  225 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~  225 (356)
                      ......++++||-.| +| .|..+..+++.. +.+|++++.+++..          +.+++   ..|....+..... +.
T Consensus        48 ~~~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~v~~vD~~~~~~----------~~a~~~~~~~~~~~~v~~~~~-d~  114 (233)
T 2gpy_A           48 HLLKMAAPARILEIG-TA-IGYSAIRMAQALPEATIVSIERDERRY----------EEAHKHVKALGLESRIELLFG-DA  114 (233)
T ss_dssp             HHHHHHCCSEEEEEC-CT-TSHHHHHHHHHCTTCEEEEECCCHHHH----------HHHHHHHHHTTCTTTEEEECS-CG
T ss_pred             HHHhccCCCEEEEec-CC-CcHHHHHHHHHCCCCEEEEEECCHHHH----------HHHHHHHHHcCCCCcEEEEEC-CH
Confidence            334456788999998 44 788999999988 68999999998876          44442   3454211111111 22


Q ss_pred             HHHHHHhC-CCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          226 DAALKRCF-PEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       226 ~~~~~~~~-~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .+.+.... .+.+|+||.....    ..+..+.+.|+++|+++...
T Consensus       115 ~~~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          115 LQLGEKLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             GGSHHHHTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             HHHHHhcccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            22222222 2479999876653    46678889999999998753

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.06  E-value=0.00089  Score=58.61  Aligned_cols=83  Identities=16%  Similarity=0.185  Sum_probs=52.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~~~~  233 (356)
                      +.+++|+||+|++|.++++.+...|++|+++.++.+..     .+++.+.++ +.+.. .  ..|..+.+++.+.+.+..
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~   80 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTA-----METMKETYK-DVEERLQFVQADVTKKEDLHKIVEEAM   80 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-----HHHHHHHTG-GGGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHH-----HHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999999997765542     011112222 22321 1  234444323333333322


Q ss_pred             C--CCccEEEeCCC
Q 018404          234 P--EGIDIYFEHVG  245 (356)
Q Consensus       234 ~--~~~d~vid~~g  245 (356)
                      .  +++|++|.+.|
T Consensus        81 ~~~g~id~lv~~Ag   94 (264)
T 3i4f_A           81 SHFGKIDFLINNAG   94 (264)
T ss_dssp             HHHSCCCEEECCCC
T ss_pred             HHhCCCCEEEECCc
Confidence            1  36999999999

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.06  E-value=0.0012  Score=57.90  Aligned_cols=84  Identities=14%  Similarity=0.201  Sum_probs=54.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC---CEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMG---CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAA  228 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g---~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~  228 (356)
                      .++.+|||+||+|++|.++++.+...|   ++|++++++.++.      +++ +.+. +.+.. ..  .|..+.+.+.+.
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~------~~~-~~l~-~~~~~~~~~~~Dl~~~~~v~~~   90 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA------KEL-EDLA-KNHSNIHILEIDLRNFDAYDKL   90 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC------HHH-HHHH-HHCTTEEEEECCTTCGGGHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhh------HHH-HHhh-ccCCceEEEEecCCChHHHHHH
Confidence            346799999999999999999998899   9999999987765      111 2222 11222 12  244443234333


Q ss_pred             HH---HhCCC-CccEEEeCCCc
Q 018404          229 LK---RCFPE-GIDIYFEHVGG  246 (356)
Q Consensus       229 ~~---~~~~~-~~d~vid~~g~  246 (356)
                      +.   +..+. ++|++|.+.|.
T Consensus        91 ~~~~~~~~g~~~id~li~~Ag~  112 (267)
T 1sny_A           91 VADIEGVTKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HHHHHHHHGGGCCSEEEECCCC
T ss_pred             HHHHHHhcCCCCccEEEECCCc
Confidence            33   32232 59999999883

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.06  E-value=0.0013  Score=58.13  Aligned_cols=82  Identities=11%  Similarity=0.119  Sum_probs=54.5

Q ss_pred             CCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCc--chhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHH
Q 018404          155 KKGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSR--EKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAA  228 (356)
Q Consensus       155 ~~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~  228 (356)
                      -++.++||+||+  +|+|.++++.+...|++|++++++.  +..          +.+.++.+....  .|..+.+++.+.
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~----------~~l~~~~~~~~~~~~Dl~~~~~v~~~   93 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRV----------EKLCAEFNPAAVLPCDVISDQEIKDL   93 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHH----------HHHHGGGCCSEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHH----------HHHHHhcCCceEEEeecCCHHHHHHH
Confidence            457899999988  6699999999989999999999887  333          445424443222  344443233333


Q ss_pred             HHHhC--CCCccEEEeCCCc
Q 018404          229 LKRCF--PEGIDIYFEHVGG  246 (356)
Q Consensus       229 ~~~~~--~~~~d~vid~~g~  246 (356)
                      +.+..  .+++|++|.+.|.
T Consensus        94 ~~~~~~~~g~id~li~nAg~  113 (280)
T 3nrc_A           94 FVELGKVWDGLDAIVHSIAF  113 (280)
T ss_dssp             HHHHHHHCSSCCEEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCcc
Confidence            33321  1379999999874

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.05  E-value=0.0022  Score=55.65  Aligned_cols=106  Identities=19%  Similarity=0.207  Sum_probs=72.0

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL  225 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  225 (356)
                      +.....+.++++||-.| +|. |..+..+++.+  +.+|++++.+++..      +.+.+.++ ..|....++.... ++
T Consensus        85 i~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~------~~a~~~~~-~~~~~~~v~~~~~-d~  154 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAG-VGS-GALTLFLANIVGPEGRVVSYEIREDFA------KLAWENIK-WAGFDDRVTIKLK-DI  154 (255)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTSEEEEECSCHHHH------HHHHHHHH-HHTCTTTEEEECS-CG
T ss_pred             HHHhhCCCCCCEEEEec-CCc-hHHHHHHHHHhCCCeEEEEEecCHHHH------HHHHHHHH-HcCCCCceEEEEC-ch
Confidence            33557789999999998 444 88999999986  57999999998876      22223333 3465321222121 22


Q ss_pred             HHHHHHhCCCCccEEEeCCCc--hHHHHHHHhhccCCeEEEEc
Q 018404          226 DAALKRCFPEGIDIYFEHVGG--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       226 ~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .+   ....+.+|+|+.....  ..+..+.+.|+++|+++.+.
T Consensus       155 ~~---~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          155 YE---GIEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             GG---CCCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             hh---ccCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            21   1222379999987776  48899999999999998774

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.04  E-value=0.0036  Score=51.83  Aligned_cols=96  Identities=13%  Similarity=0.125  Sum_probs=64.8

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcC----------CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE---e
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMG----------CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF---N  218 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g----------~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv---~  218 (356)
                      ..++++++||-+| +|. |..+..+++..+          .+|++++.++... +        .      ++ ..+   |
T Consensus        18 ~~~~~~~~vLDlG-cG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-~--------~------~~-~~~~~~d   79 (196)
T 2nyu_A           18 QILRPGLRVLDCG-AAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-L--------E------GA-TFLCPAD   79 (196)
T ss_dssp             CCCCTTCEEEEET-CCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-C--------T------TC-EEECSCC
T ss_pred             CCCCCCCEEEEeC-CCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-C--------C------CC-eEEEecc
Confidence            4478899999999 666 999999999986          7899999887541 0        1      11 222   1


Q ss_pred             cCCcccHHHHHHHhCCC-CccEEEe-----CCCc-------------hHHHHHHHhhccCCeEEEEc
Q 018404          219 YKEENDLDAALKRCFPE-GIDIYFE-----HVGG-------------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~-~~d~vid-----~~g~-------------~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .... .....+.+..++ .+|+|+.     +.+.             ..+..+.+.|+|+|+++...
T Consensus        80 ~~~~-~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           80 VTDP-RTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             TTSH-HHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCH-HHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            1121 234444444544 7999994     3342             34677889999999998763

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.04  E-value=0.0012  Score=57.17  Aligned_cols=101  Identities=16%  Similarity=0.066  Sum_probs=63.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKL-MGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~-~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      ++.++||+||+|++|.++++.+.. .|++|+.+.++++...         +.+.     ....|..+.+++.+.+.....
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~---------~~~~-----~~~~Dv~~~~~v~~~~~~~~~   68 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA---------ENLK-----FIKADLTKQQDITNVLDIIKN   68 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC---------TTEE-----EEECCTTCHHHHHHHHHHTTT
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc---------ccce-----EEecCcCCHHHHHHHHHHHHh
Confidence            467899999999999998876666 7889999887765210         1110     112344443244444433333


Q ss_pred             CCccEEEeCCCch-----------HH---------------HHHHHhhccCCeEEEEccccc
Q 018404          235 EGIDIYFEHVGGK-----------ML---------------DAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       235 ~~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      +++|+++++.|..           .+               +.+++.+.++|++|.++....
T Consensus        69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  130 (244)
T 4e4y_A           69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC  130 (244)
T ss_dssp             CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH
Confidence            3899999999841           11               223334556789999887554

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.03  E-value=0.0034  Score=52.52  Aligned_cols=103  Identities=16%  Similarity=0.122  Sum_probs=69.0

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLD  226 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~  226 (356)
                      ....+.++++||-.| +| .|..++.+++.. +.+|++++.+++..      +.+.+.++ ..+..  .++..    ++.
T Consensus        34 ~~l~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~------~~a~~~~~-~~~~~~v~~~~~----d~~  100 (204)
T 3e05_A           34 SKLRLQDDLVMWDIG-AG-SASVSIEASNLMPNGRIFALERNPQYL------GFIRDNLK-KFVARNVTLVEA----FAP  100 (204)
T ss_dssp             HHTTCCTTCEEEEET-CT-TCHHHHHHHHHCTTSEEEEEECCHHHH------HHHHHHHH-HHTCTTEEEEEC----CTT
T ss_pred             HHcCCCCCCEEEEEC-CC-CCHHHHHHHHHCCCCEEEEEeCCHHHH------HHHHHHHH-HhCCCcEEEEeC----Chh
Confidence            446788999999999 55 488999999986 47999999998877      22222233 34542  22222    111


Q ss_pred             HHHHHhCCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          227 AALKRCFPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      +.+..  .+.+|+|+.....    ..+..+.+.|+++|+++....
T Consensus       101 ~~~~~--~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          101 EGLDD--LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             TTCTT--SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             hhhhc--CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            11111  1369999987652    577899999999999987643

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.03  E-value=0.0015  Score=57.41  Aligned_cols=84  Identities=17%  Similarity=0.273  Sum_probs=52.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc-hhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE-KVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALK  230 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~  230 (356)
                      ..+.+++|+||+|++|.++++.+...|++|+++.+... ..      ++..+.++ ..+.. ..  +|..+.+++.+.+.
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~   95 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHV------STWLMHER-DAGRDFKAYAVDVADFESCERCAE   95 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHH------HHHHHHHH-TTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHH------HHHHHHHH-hcCCceEEEEecCCCHHHHHHHHH
Confidence            35679999999999999999999999999999984433 32      11112223 33332 22  34444323333333


Q ss_pred             HhCC--CCccEEEeCCC
Q 018404          231 RCFP--EGIDIYFEHVG  245 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g  245 (356)
                      +...  +++|++|.+.|
T Consensus        96 ~~~~~~g~id~li~nAg  112 (269)
T 3gk3_A           96 KVLADFGKVDVLINNAG  112 (269)
T ss_dssp             HHHHHHSCCSEEEECCC
T ss_pred             HHHHHcCCCCEEEECCC
Confidence            2211  36999999988

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.02  E-value=0.0046  Score=53.38  Aligned_cols=75  Identities=13%  Similarity=0.087  Sum_probs=48.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHH-----HH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA-----LK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-----~~  230 (356)
                      .+.++||+||+|++|.++++.+.. |++|++++++.++.          +.+. +..-...+..    ++.+.     +.
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~----------~~~~-~~~~~~~~~~----D~~~~~~~~~~~   67 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHL----------AALA-EIEGVEPIES----DIVKEVLEEGGV   67 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHH----------HHHH-TSTTEEEEEC----CHHHHHHTSSSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHH----------HHHH-hhcCCcceec----ccchHHHHHHHH
Confidence            367999999999999998887765 99999999988876          6665 4322122221    22221     11


Q ss_pred             HhCC--CCccEEEeCCCc
Q 018404          231 RCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~  246 (356)
                      +...  +++|++|.+.|.
T Consensus        68 ~~~~~~~~id~lv~~Ag~   85 (245)
T 3e9n_A           68 DKLKNLDHVDTLVHAAAV   85 (245)
T ss_dssp             GGGTTCSCCSEEEECC--
T ss_pred             HHHHhcCCCCEEEECCCc
Confidence            1111  379999999984

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.01  E-value=0.0021  Score=56.66  Aligned_cols=81  Identities=12%  Similarity=0.174  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCcccHH---HHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEENDLD---AAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~---~~~  229 (356)
                      .|.++||+||+|++|.++++.+...|++|+++++++...       +..+.+. +.+.. .  ..|..+.++..   +.+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-------~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVK-------EVADEIA-DGGGSAEAVVADLADLEGAANVAEEL  101 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHH-------HHHHHHH-TTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHH-------HHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999654322       2223333 33432 1  22333331222   222


Q ss_pred             HHhCCCCccEEEeCCCc
Q 018404          230 KRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~  246 (356)
                      .+.  +++|++|.+.|.
T Consensus       102 ~~~--g~iD~lv~nAg~  116 (273)
T 3uf0_A          102 AAT--RRVDVLVNNAGI  116 (273)
T ss_dssp             HHH--SCCCEEEECCCC
T ss_pred             Hhc--CCCcEEEECCCC
Confidence            222  479999999883

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.00  E-value=0.0024  Score=49.86  Aligned_cols=76  Identities=16%  Similarity=0.147  Sum_probs=53.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      +++|+|.|+ |.+|..+++.++..|++|+++++++++.          +.++ +.+.. ++..+.. + .+.+.+..-++
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~----------~~~~-~~~~~-~~~~d~~-~-~~~l~~~~~~~   70 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV----------NAYA-SYATH-AVIANAT-E-ENELLSLGIRN   70 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH----------HTTT-TTCSE-EEECCTT-C-HHHHHTTTGGG
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HhCCE-EEEeCCC-C-HHHHHhcCCCC
Confidence            467999995 9999999999999999999999887776          5555 44543 3322221 2 23344331236


Q ss_pred             ccEEEeCCCch
Q 018404          237 IDIYFEHVGGK  247 (356)
Q Consensus       237 ~d~vid~~g~~  247 (356)
                      +|+++.|++.+
T Consensus        71 ~d~vi~~~~~~   81 (144)
T 2hmt_A           71 FEYVIVAIGAN   81 (144)
T ss_dssp             CSEEEECCCSC
T ss_pred             CCEEEECCCCc
Confidence            99999999963

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.99  E-value=0.0032  Score=56.26  Aligned_cols=105  Identities=10%  Similarity=0.038  Sum_probs=69.8

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  227 (356)
                      +.....++++++||-+| +| .|..+..+++..|++|++++.+++..      +.+.+.+. ..|...-+..... ++. 
T Consensus        64 ~~~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~gvD~s~~~~------~~a~~~~~-~~~~~~~v~~~~~-d~~-  132 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIG-CG-WGSTMRHAVAEYDVNVIGLTLSENQY------AHDKAMFD-EVDSPRRKEVRIQ-GWE-  132 (302)
T ss_dssp             HHHTTCCCTTCEEEEET-CT-TSHHHHHHHHHHCCEEEEEECCHHHH------HHHHHHHH-HSCCSSCEEEEEC-CGG-
T ss_pred             HHHHcCCCCcCEEEEee-cc-CcHHHHHHHHhCCCEEEEEECCHHHH------HHHHHHHH-hcCCCCceEEEEC-CHH-
Confidence            33446788999999999 44 58999999999899999999998876      12222233 3454311111111 221 


Q ss_pred             HHHHhCCCCccEEEeCCCc----------------hHHHHHHHhhccCCeEEEEcc
Q 018404          228 ALKRCFPEGIDIYFEHVGG----------------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                         ++ .+.+|+|+....-                ..+..+.+.|+|+|+++....
T Consensus       133 ---~~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          133 ---EF-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             ---GC-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             ---Hc-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence               22 4579999874321                456888999999999987654

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.98  E-value=0.0018  Score=56.31  Aligned_cols=108  Identities=14%  Similarity=0.045  Sum_probs=70.3

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  227 (356)
                      ......++.+||-+| + |.|..++.+++.+  +.+|++++.+++..      +.+.+.++ +.|....+..... +..+
T Consensus        57 ~l~~~~~~~~VLdiG-~-G~G~~~~~la~~~~~~~~v~~vD~s~~~~------~~a~~~~~-~~g~~~~v~~~~~-d~~~  126 (248)
T 3tfw_A           57 LLVRLTQAKRILEIG-T-LGGYSTIWMARELPADGQLLTLEADAHHA------QVARENLQ-LAGVDQRVTLREG-PALQ  126 (248)
T ss_dssp             HHHHHHTCSEEEEEC-C-TTSHHHHHHHTTSCTTCEEEEEECCHHHH------HHHHHHHH-HTTCTTTEEEEES-CHHH
T ss_pred             HHHhhcCCCEEEEec-C-CchHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCcEEEEEc-CHHH
Confidence            334456789999998 3 4588889999987  57999999998876      22223333 4465321222222 4444


Q ss_pred             HHHHhCCC-CccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          228 ALKRCFPE-GIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       228 ~~~~~~~~-~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+...... .+|+||-....    ..+..+.+.|+|+|.++....
T Consensus       127 ~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~  171 (248)
T 3tfw_A          127 SLESLGECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV  171 (248)
T ss_dssp             HHHTCCSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred             HHHhcCCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence            45544332 79999843332    367888999999999886543

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.95  E-value=0.0012  Score=56.86  Aligned_cols=102  Identities=19%  Similarity=0.219  Sum_probs=67.8

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ....+.++++||-.| +| .|..+..+++..+.+|++++.+++..      +.+.+.+. ..|...+ ..... +..   
T Consensus        85 ~~l~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~v~~vD~~~~~~------~~a~~~~~-~~~~~~v-~~~~~-d~~---  150 (235)
T 1jg1_A           85 EIANLKPGMNILEVG-TG-SGWNAALISEIVKTDVYTIERIPELV------EFAKRNLE-RAGVKNV-HVILG-DGS---  150 (235)
T ss_dssp             HHHTCCTTCCEEEEC-CT-TSHHHHHHHHHHCSCEEEEESCHHHH------HHHHHHHH-HTTCCSE-EEEES-CGG---
T ss_pred             HhcCCCCCCEEEEEe-CC-cCHHHHHHHHHhCCEEEEEeCCHHHH------HHHHHHHH-HcCCCCc-EEEEC-Ccc---
Confidence            345788999999999 55 79999999998878999999988776      12222233 3454322 11111 221   


Q ss_pred             HHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          230 KRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       230 ~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      ..+..+ ++|+|+.+... .....+.+.|+++|+++..
T Consensus       151 ~~~~~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~  188 (235)
T 1jg1_A          151 KGFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  188 (235)
T ss_dssp             GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cCCCCCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEE
Confidence            111112 59999987765 4557889999999998754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.94  E-value=0.00097  Score=58.43  Aligned_cols=76  Identities=14%  Similarity=0.118  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~  234 (356)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.          +.    .... ...|..+.+++.+.+.+...
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~----~~~~~~~~Dv~d~~~v~~~~~~~~~   92 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS----------AD----PDIHTVAGDISKPETADRIVREGIE   92 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC----------SS----TTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc----------cc----CceEEEEccCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999887664          21    1111 11233343233333332211


Q ss_pred             --CCccEEEeCCC
Q 018404          235 --EGIDIYFEHVG  245 (356)
Q Consensus       235 --~~~d~vid~~g  245 (356)
                        +++|++|.+.|
T Consensus        93 ~~g~iD~lv~nAg  105 (260)
T 3un1_A           93 RFGRIDSLVNNAG  105 (260)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HCCCCCEEEECCC
Confidence              36999999987

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.93  E-value=0.0044  Score=53.74  Aligned_cols=73  Identities=23%  Similarity=0.302  Sum_probs=51.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCF  233 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~  233 (356)
                      -++.++||+||+|++|.++++.+...|++|++++++.+..          +    +++.... .|. .. +....+.+..
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----------~----~~~~~~~~~D~-~~-~~~~~~~~~~   80 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----------K----RSGHRYVVCDL-RK-DLDLLFEKVK   80 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------H----HTCSEEEECCT-TT-CHHHHHHHSC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----------H----hhCCeEEEeeH-HH-HHHHHHHHhc
Confidence            4578999999999999999999999999999999876433          2    3342122 233 21 4444444432


Q ss_pred             CCCccEEEeCCC
Q 018404          234 PEGIDIYFEHVG  245 (356)
Q Consensus       234 ~~~~d~vid~~g  245 (356)
                        ++|++|++.|
T Consensus        81 --~iD~lv~~Ag   90 (249)
T 1o5i_A           81 --EVDILVLNAG   90 (249)
T ss_dssp             --CCSEEEECCC
T ss_pred             --CCCEEEECCC
Confidence              6999999988

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.92  E-value=0.005  Score=59.11  Aligned_cols=88  Identities=17%  Similarity=0.238  Sum_probs=58.5

Q ss_pred             CCC--CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHH
Q 018404          155 KKG--EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAA  228 (356)
Q Consensus       155 ~~g--~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~  228 (356)
                      +++  .++||+||+|++|..+++.+...|+ +|+.+.++....   +..+++.+.++ +.|....   .|..+.+.+...
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~---~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~  310 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADA---PGAAELRAELE-QLGVRVTIAACDAADREALAAL  310 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGS---TTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCCh---HHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHH
Confidence            445  8999999999999999988888899 888888764322   22234445566 6675322   233443244444


Q ss_pred             HHHhCCC-CccEEEeCCCc
Q 018404          229 LKRCFPE-GIDIYFEHVGG  246 (356)
Q Consensus       229 ~~~~~~~-~~d~vid~~g~  246 (356)
                      +.+.... ++|+||.+.|.
T Consensus       311 ~~~i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          311 LAELPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             HHTCCTTSCEEEEEECCCC
T ss_pred             HHHHHHhCCCeEEEECCcc
Confidence            5544333 79999999883

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.92  E-value=0.0057  Score=60.28  Aligned_cols=105  Identities=16%  Similarity=0.156  Sum_probs=66.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc----ccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE----NDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~----~~~~~~~~~  231 (356)
                      .|++++|+||++|+|.+.++.+...|++|++.++...+        ++.+.++ +.|...+....+-    ..+.+.+.+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~--------~~~~~i~-~~g~~~~~~~~Dv~~~~~~~~~~~~~  391 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT--------KTVDEIK-AAGGEAWPDQHDVAKDSEAIIKNVID  391 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCH--------HHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHH
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHH--------HHHHHHH-hcCCeEEEEEcChHHHHHHHHHHHHH
Confidence            46789999999999999999999999999988753211        2224555 4554333222221    012222322


Q ss_pred             hCCCCccEEEeCCCch--------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          232 CFPEGIDIYFEHVGGK--------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      .. |++|+++++.|..                          ..+.++..|+  .+|+||.+++..+
T Consensus       392 ~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag  457 (604)
T 2et6_A          392 KY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG  457 (604)
T ss_dssp             HH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred             hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            22 4699999998820                          1245555663  3589999987544

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.91  E-value=0.0038  Score=50.71  Aligned_cols=105  Identities=18%  Similarity=0.249  Sum_probs=69.4

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~  227 (356)
                      ....+.++++||-.| +| .|..+..+++.. +++|++++.+++..      +.+.+.++ +.+.. .+ ....  +..+
T Consensus        19 ~~~~~~~~~~vldiG-~G-~G~~~~~l~~~~~~~~v~~vD~~~~~~------~~a~~~~~-~~~~~~~~-~~~~--d~~~   86 (178)
T 3hm2_A           19 SALAPKPHETLWDIG-GG-SGSIAIEWLRSTPQTTAVCFEISEERR------ERILSNAI-NLGVSDRI-AVQQ--GAPR   86 (178)
T ss_dssp             HHHCCCTTEEEEEES-TT-TTHHHHHHHTTSSSEEEEEECSCHHHH------HHHHHHHH-TTTCTTSE-EEEC--CTTG
T ss_pred             HHhcccCCCeEEEeC-CC-CCHHHHHHHHHCCCCeEEEEeCCHHHH------HHHHHHHH-HhCCCCCE-EEec--chHh
Confidence            345678999999999 55 499999999987 67999999998876      22223333 44553 33 2212  2111


Q ss_pred             HHHHhCCCCccEEEeCCCc---hHHHHHHHhhccCCeEEEEcc
Q 018404          228 ALKRCFPEGIDIYFEHVGG---KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+... .+.+|+|+.....   ..+..+.+.|+++|+++....
T Consensus        87 ~~~~~-~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           87 AFDDV-PDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             GGGGC-CSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             hhhcc-CCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            22221 1479999976554   378999999999999987643

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.91  E-value=0.0023  Score=55.15  Aligned_cols=106  Identities=15%  Similarity=0.109  Sum_probs=69.0

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA  228 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  228 (356)
                      .....++++||-.| +| .|..+..+++..  +.+|++++.+++..      +.+.+.++ +.|....+..... +..+.
T Consensus        55 l~~~~~~~~VLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~------~~a~~~~~-~~g~~~~v~~~~~-d~~~~  124 (239)
T 2hnk_A           55 LTKISGAKRIIEIG-TF-TGYSSLCFASALPEDGKILCCDVSEEWT------NVARKYWK-ENGLENKIFLKLG-SALET  124 (239)
T ss_dssp             HHHHHTCSEEEEEC-CT-TCHHHHHHHHHSCTTCEEEEEESCHHHH------HHHHHHHH-HTTCGGGEEEEES-CHHHH
T ss_pred             HHHhhCcCEEEEEe-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCCEEEEEC-CHHHH
Confidence            34456788999998 44 699999999998  57999999998876      11222233 3455321222122 33333


Q ss_pred             HHHhC--------------C-CCccEEEeCCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          229 LKRCF--------------P-EGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       229 ~~~~~--------------~-~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +.+..              . +.+|+||...+.    ..+..+.+.|+++|.++...
T Consensus       125 ~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          125 LQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             HHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            33321              1 569999987654    35678889999999998653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.91  E-value=0.0028  Score=55.55  Aligned_cols=83  Identities=11%  Similarity=0.104  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CcchhccccchhHHHHHHHhhcCCC-EE--EecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFD-DA--FNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~-~v--v~~~~~~~~~~~~~~  231 (356)
                      .+.+|||+||+|++|.++++.+...|++|+++.+ +.++.      ++..+.++ +.+.. ..  +|..+.+++.+.+.+
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dl~~~~~~~~~~~~   97 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGA------QETLNAIV-ANGGNGRLLSFDVANREQCREVLEH   97 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHH------HHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHH
Confidence            3679999999999999999999999999977654 43333      22223333 33432 22  244443233333332


Q ss_pred             hCC--CCccEEEeCCC
Q 018404          232 CFP--EGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~--~~~d~vid~~g  245 (356)
                      ...  +++|++|.+.|
T Consensus        98 ~~~~~g~id~li~nAg  113 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAG  113 (267)
T ss_dssp             HHHHHCCCSEEEECCC
T ss_pred             HHHHhCCccEEEECCC
Confidence            211  37999999988

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.91  E-value=0.002  Score=54.11  Aligned_cols=101  Identities=13%  Similarity=0.043  Sum_probs=66.8

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~  227 (356)
                      ....+.++++||-.| +| .|..+..+++. +.+|++++.+++..      +.+.+.+. ..+...  ++..    +..+
T Consensus        71 ~~l~~~~~~~vLdiG-~G-~G~~~~~la~~-~~~v~~vD~~~~~~------~~a~~~~~-~~~~~~v~~~~~----d~~~  136 (210)
T 3lbf_A           71 ELLELTPQSRVLEIG-TG-SGYQTAILAHL-VQHVCSVERIKGLQ------WQARRRLK-NLDLHNVSTRHG----DGWQ  136 (210)
T ss_dssp             HHTTCCTTCEEEEEC-CT-TSHHHHHHHHH-SSEEEEEESCHHHH------HHHHHHHH-HTTCCSEEEEES----CGGG
T ss_pred             HhcCCCCCCEEEEEc-CC-CCHHHHHHHHh-CCEEEEEecCHHHH------HHHHHHHH-HcCCCceEEEEC----Cccc
Confidence            456788999999999 44 58888888888 88999999998876      22222233 345432  2211    1111


Q ss_pred             HHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEc
Q 018404          228 ALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ....  .+.+|+|+.+... .....+.+.|+++|+++..-
T Consensus       137 ~~~~--~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~  174 (210)
T 3lbf_A          137 GWQA--RAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPV  174 (210)
T ss_dssp             CCGG--GCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred             CCcc--CCCccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence            1111  2379999987665 34457889999999988653

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.90  E-value=0.011  Score=46.12  Aligned_cols=93  Identities=20%  Similarity=0.105  Sum_probs=63.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      ..+|+|.| .|.+|..+++.+...|.+|+++++++++.          +.++ +.+.. ++..+.  .-.+.+++..-.+
T Consensus         6 ~~~v~I~G-~G~iG~~la~~L~~~g~~V~~id~~~~~~----------~~~~-~~~~~-~~~gd~--~~~~~l~~~~~~~   70 (141)
T 3llv_A            6 RYEYIVIG-SEAAGVGLVRELTAAGKKVLAVDKSKEKI----------ELLE-DEGFD-AVIADP--TDESFYRSLDLEG   70 (141)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHH----------HHHH-HTTCE-EEECCT--TCHHHHHHSCCTT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHH----------HHHH-HCCCc-EEECCC--CCHHHHHhCCccc
Confidence            45799999 59999999999999999999999998887          7777 66654 232221  1123344432237


Q ss_pred             ccEEEeCCCchHH----HHHHHhhccCCeEEEE
Q 018404          237 IDIYFEHVGGKML----DAVLLNMRLHGRIAAC  265 (356)
Q Consensus       237 ~d~vid~~g~~~~----~~~~~~l~~~G~~v~~  265 (356)
                      +|++|.+++....    ....+.+. ..+++..
T Consensus        71 ~d~vi~~~~~~~~n~~~~~~a~~~~-~~~iia~  102 (141)
T 3llv_A           71 VSAVLITGSDDEFNLKILKALRSVS-DVYAIVR  102 (141)
T ss_dssp             CSEEEECCSCHHHHHHHHHHHHHHC-CCCEEEE
T ss_pred             CCEEEEecCCHHHHHHHHHHHHHhC-CceEEEE
Confidence            9999999997422    23334444 5555544

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.88  E-value=0.0017  Score=54.81  Aligned_cols=101  Identities=19%  Similarity=0.225  Sum_probs=68.3

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCccc
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEEND  224 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~  224 (356)
                      ....+.++++||.+| +| .|..+..+++..+  .+|++++.+++..          +.+++   ..+...+ ..... +
T Consensus        71 ~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~----------~~a~~~~~~~~~~~v-~~~~~-d  136 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIG-TG-CGYHAAVTAEIVGEDGLVVSIERIPELA----------EKAERTLRKLGYDNV-IVIVG-D  136 (215)
T ss_dssp             HHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHH----------HHHHHHHHHHTCTTE-EEEES-C
T ss_pred             HhhCCCCCCEEEEEC-CC-ccHHHHHHHHHhCCCCEEEEEeCCHHHH----------HHHHHHHHHcCCCCe-EEEEC-C
Confidence            446788999999999 55 5999999999886  7999999998876          44442   3344321 11111 2


Q ss_pred             HHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEc
Q 018404          225 LDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ....+.  ..+.+|+|+.+... .....+.+.|+++|+++..-
T Consensus       137 ~~~~~~--~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          137 GTLGYE--PLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             GGGCCG--GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cccCCC--CCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence            111111  12379999987766 44478899999999988653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.88  E-value=0.0053  Score=52.61  Aligned_cols=36  Identities=22%  Similarity=0.172  Sum_probs=32.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +.++||+||+|++|.++++.+...|++|++++++.+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~   37 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   37 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc
Confidence            568999999999999999988888999999998765

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.88  E-value=0.0038  Score=56.14  Aligned_cols=100  Identities=13%  Similarity=0.128  Sum_probs=68.3

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLD  226 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~  226 (356)
                      ....+.++++||-+| +|. |..+..+++..|++|++++.+++..          +.+++   +.|....+..... ++ 
T Consensus        84 ~~~~~~~~~~vLDiG-cG~-G~~~~~la~~~~~~v~gvD~s~~~~----------~~a~~~~~~~~~~~~v~~~~~-d~-  149 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIG-CGW-GTTMRRAVERFDVNVIGLTLSKNQH----------ARCEQVLASIDTNRSRQVLLQ-GW-  149 (318)
T ss_dssp             TTSCCCTTCEEEEES-CTT-SHHHHHHHHHHCCEEEEEESCHHHH----------HHHHHHHHTSCCSSCEEEEES-CG-
T ss_pred             HhcCCCCcCEEEEEc-ccc-hHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHHHhcCCCCceEEEEC-Ch-
Confidence            445678999999999 554 8889999998899999999998877          55542   2343211111111 21 


Q ss_pred             HHHHHhCCCCccEEEeC-----CCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          227 AALKRCFPEGIDIYFEH-----VGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                         .+. .+.+|+|+..     .+.    ..+..+.+.|+|+|+++....
T Consensus       150 ---~~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          150 ---EDF-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             ---GGC-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             ---HHC-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence               111 2479999875     432    467888999999999987553

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.87  E-value=0.01  Score=53.35  Aligned_cols=100  Identities=14%  Similarity=0.126  Sum_probs=61.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC---cchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGS---REKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~  230 (356)
                      .+.+++|+| +|++|.+++..+...|+ +|+++.|+   .++.      +++.+.+.+.++.. .++++.+.+++.+.+.
T Consensus       153 ~gk~~lVlG-aGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a------~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~  225 (315)
T 3tnl_A          153 IGKKMTICG-AGGAATAICIQAALDGVKEISIFNRKDDFYANA------EKTVEKINSKTDCKAQLFDIEDHEQLRKEIA  225 (315)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHH------HHHHHHHHHHSSCEEEEEETTCHHHHHHHHH
T ss_pred             cCCEEEEEC-CChHHHHHHHHHHHCCCCEEEEEECCCchHHHH------HHHHHHhhhhcCCceEEeccchHHHHHhhhc
Confidence            578999999 59999999999999999 89999998   5554      23333333233432 3444443212333333


Q ss_pred             HhCCCCccEEEeCCCchHHH------H-HHHhhccCCeEEEEcc
Q 018404          231 RCFPEGIDIYFEHVGGKMLD------A-VLLNMRLHGRIAACGM  267 (356)
Q Consensus       231 ~~~~~~~d~vid~~g~~~~~------~-~~~~l~~~G~~v~~g~  267 (356)
                           .+|+||+|+.-....      . ....++++..++.+-.
T Consensus       226 -----~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY  264 (315)
T 3tnl_A          226 -----ESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVY  264 (315)
T ss_dssp             -----TCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCC
T ss_pred             -----CCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEecc
Confidence                 489999998742211      0 2334566555555543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.85  E-value=0.0014  Score=57.19  Aligned_cols=76  Identities=14%  Similarity=0.124  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHH---HHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLD---AAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~---~~~  229 (356)
                      .+.++||+||++++|.++++.+...|++|++++++.++            ... +++...   ..|..+.+++.   +.+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~------------~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~   74 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED------------VVA-DLGDRARFAAADVTDEAAVASALDLA   74 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH------------HHH-HTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH------------HHH-hcCCceEEEECCCCCHHHHHHHHHHH
Confidence            36799999999999999999998999999999985433            223 444421   23444432222   223


Q ss_pred             HHhCCCCccEEEeCCCc
Q 018404          230 KRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~  246 (356)
                      .+  .+++|+++++.|.
T Consensus        75 ~~--~g~id~lv~nAg~   89 (257)
T 3tl3_A           75 ET--MGTLRIVVNCAGT   89 (257)
T ss_dssp             HH--HSCEEEEEECGGG
T ss_pred             HH--hCCCCEEEECCCC
Confidence            33  2479999999983

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.84  E-value=0.008  Score=52.10  Aligned_cols=105  Identities=12%  Similarity=0.091  Sum_probs=67.9

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ....++.+||-+|  .+.|..++.+++.+  +.+|++++.+++..      +.+.+.++ +.|...-+..... +..+.+
T Consensus        75 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~------~~a~~~~~-~~g~~~~i~~~~g-da~~~l  144 (247)
T 1sui_A           75 LKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENY------ELGLPVIK-KAGVDHKIDFREG-PALPVL  144 (247)
T ss_dssp             HHHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHH------HHHHHHHH-HTTCGGGEEEEES-CHHHHH
T ss_pred             HHhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCCeEEEEC-CHHHHH
Confidence            3445678999998  56788899999987  68999999998876      22223333 4455321222222 333333


Q ss_pred             HHhC-----CCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          230 KRCF-----PEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       230 ~~~~-----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ....     .+.||+||-....    ..+..+.+.|+++|.++.-.
T Consensus       145 ~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          145 DEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             HHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             HHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence            3331     3479999854332    46788999999999998653

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.83  E-value=0.0029  Score=53.87  Aligned_cols=108  Identities=10%  Similarity=0.028  Sum_probs=69.4

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  227 (356)
                      ......++.+||-.| +| .|..++.+++.+  +.+|++++.+++..      +.+.+.++ ..|...-+..... +..+
T Consensus        63 ~l~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~------~~a~~~~~-~~g~~~~i~~~~~-d~~~  132 (229)
T 2avd_A           63 NLARLIQAKKALDLG-TF-TGYSALALALALPADGRVVTCEVDAQPP------ELGRPLWR-QAEAEHKIDLRLK-PALE  132 (229)
T ss_dssp             HHHHHTTCCEEEEEC-CT-TSHHHHHHHTTSCTTCEEEEEESCSHHH------HHHHHHHH-HTTCTTTEEEEES-CHHH
T ss_pred             HHHHhcCCCEEEEEc-CC-ccHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HCCCCCeEEEEEc-CHHH
Confidence            334456788999998 44 889999999986  57999999998876      12222333 3454211222222 3444


Q ss_pred             HHHHhCC----CCccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          228 ALKRCFP----EGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       228 ~~~~~~~----~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+.+...    +.+|+||.....    ..+..+.+.|+++|.++....
T Consensus       133 ~~~~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  180 (229)
T 2avd_A          133 TLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV  180 (229)
T ss_dssp             HHHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             HHHHHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence            4433321    469998865432    367889999999999987643

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.83  E-value=0.0015  Score=57.18  Aligned_cols=85  Identities=21%  Similarity=0.277  Sum_probs=53.6

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHH
Q 018404          156 KGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~  230 (356)
                      ++.+++|+||+  +++|.++++.+...|++|++++++.++.     ..+..+.+.+..+...   ..|..+.+++.+.+.
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQG-----AEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSH-----HHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchh-----HHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence            47899999999  8999999999999999999998775432     0111133332444421   234444323333333


Q ss_pred             HhC--CCCccEEEeCCC
Q 018404          231 RCF--PEGIDIYFEHVG  245 (356)
Q Consensus       231 ~~~--~~~~d~vid~~g  245 (356)
                      +..  .+++|++|.+.|
T Consensus        94 ~~~~~~g~id~li~nAg  110 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAG  110 (267)
T ss_dssp             HHHHHTSCCSEEEECCC
T ss_pred             HHHHHcCCCCEEEECCC
Confidence            221  137999999988

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.82  E-value=0.004  Score=51.67  Aligned_cols=105  Identities=14%  Similarity=0.177  Sum_probs=67.4

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ..++++++||-.| +|. |..+..+++..+  .+|++++.+++..      +.+.+.++ ..|...-+..... ++. .+
T Consensus        18 ~~~~~~~~vLDlG-cG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~------~~a~~~~~-~~~~~~~v~~~~~-d~~-~~   86 (197)
T 3eey_A           18 MFVKEGDTVVDAT-CGN-GNDTAFLASLVGENGRVFGFDIQDKAI------ANTTKKLT-DLNLIDRVTLIKD-GHQ-NM   86 (197)
T ss_dssp             HHCCTTCEEEESC-CTT-SHHHHHHHHHHCTTCEEEEECSCHHHH------HHHHHHHH-HTTCGGGEEEECS-CGG-GG
T ss_pred             hcCCCCCEEEEcC-CCC-CHHHHHHHHHhCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCCeEEEEC-CHH-HH
Confidence            3578899999998 444 888889999864  6999999998876      22223333 3444111111111 211 12


Q ss_pred             HHhCCCCccEEEeCCCc----------------hHHHHHHHhhccCCeEEEEcc
Q 018404          230 KRCFPEGIDIYFEHVGG----------------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .....+.+|+|+...+.                ..+..+.+.|+++|+++.+..
T Consensus        87 ~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           87 DKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             GGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hhhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            22233479999865532                468899999999999987754

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.81  E-value=0.0067  Score=58.51  Aligned_cols=86  Identities=17%  Similarity=0.229  Sum_probs=57.4

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAAL  229 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~  229 (356)
                      ++++.++||+||+|++|..++..+...|+ +|+.+.++....   +..+++.+.++ ..|... +  .|..+.+.+.+.+
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~---~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~  331 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEA---PGAAELAEELR-GHGCEVVHAACDVAERDALAALV  331 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGS---TTHHHHHHHHH-TTTCEEEEEECCSSCHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCccc---HHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHH
Confidence            56788999999999999999988888899 788888876431   12233334555 556432 2  2334432333344


Q ss_pred             HHhCCCCccEEEeCCCc
Q 018404          230 KRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~  246 (356)
                      .+   +.+|+||.+.|.
T Consensus       332 ~~---~~ld~VVh~AGv  345 (511)
T 2z5l_A          332 TA---YPPNAVFHTAGI  345 (511)
T ss_dssp             HH---SCCSEEEECCCC
T ss_pred             hc---CCCcEEEECCcc
Confidence            43   479999999883

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=96.81  E-value=0.0061  Score=56.42  Aligned_cols=94  Identities=13%  Similarity=0.011  Sum_probs=58.0

Q ss_pred             HcCC-CCCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCcchhccc------cchhHHHHHHHhhcCCCE-EE--ec
Q 018404          151 ICAP-KKGEYIYVSAASGAVGQLVGQFAKL-MGCYVVGSAGSREKVWLI------PMQSQLVELLKNKFGFDD-AF--NY  219 (356)
Q Consensus       151 ~~~~-~~g~~VlI~ga~g~vG~~ai~la~~-~g~~Vi~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~-vv--~~  219 (356)
                      ...+ ..++++||+||++|+|++.+..+.. .|++|+++.++.+....-      -+.+++.+.++ +.|... .+  |-
T Consensus        40 ~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~-~~G~~a~~i~~Dv  118 (405)
T 3zu3_A           40 EGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAA-QKGLYAKSINGDA  118 (405)
T ss_dssp             HCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHH-HTTCCEEEEESCT
T ss_pred             cCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHH-hcCCceEEEECCC
Confidence            3444 5578899999999999998888877 999999998765542000      00122334555 566532 22  33


Q ss_pred             CCccc---HHHHHHHhCCCCccEEEeCCCc
Q 018404          220 KEEND---LDAALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       220 ~~~~~---~~~~~~~~~~~~~d~vid~~g~  246 (356)
                      .+.+.   +.+.+.+.. |++|+++++.|.
T Consensus       119 td~~~v~~~v~~i~~~~-G~IDiLVNNAG~  147 (405)
T 3zu3_A          119 FSDEIKQLTIDAIKQDL-GQVDQVIYSLAS  147 (405)
T ss_dssp             TSHHHHHHHHHHHHHHT-SCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHc-CCCCEEEEcCcc
Confidence            33212   223333333 479999999875

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.79  E-value=0.0066  Score=58.21  Aligned_cols=90  Identities=14%  Similarity=0.164  Sum_probs=59.3

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAA  228 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~  228 (356)
                      .++++.++||+||+|++|..+++.+...|+ +|+.+.++....   +..+++.+.++ ..|... +  .|..+.+.+...
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~---~~~~~l~~~l~-~~g~~v~~~~~Dv~d~~~v~~~  297 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA---DGAGELVAELE-ALGARTTVAACDVTDRESVREL  297 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS---TTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHH
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCc---HHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHH
Confidence            357789999999999999999988888898 599998876431   12233334555 556531 2  233343234444


Q ss_pred             HHHhCC-CCccEEEeCCCc
Q 018404          229 LKRCFP-EGIDIYFEHVGG  246 (356)
Q Consensus       229 ~~~~~~-~~~d~vid~~g~  246 (356)
                      +.+... +.+|.||.+.|.
T Consensus       298 ~~~i~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          298 LGGIGDDVPLSAVFHAAAT  316 (486)
T ss_dssp             HHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHhcCCCcEEEECCcc
Confidence            554422 278999999983

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.79  E-value=0.014  Score=51.70  Aligned_cols=100  Identities=11%  Similarity=0.089  Sum_probs=61.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      -.+.+++|+| +|++|.+++..+...|+ +|+++.|+.++.      +++.+.+........+.....+ ++.+.+.+  
T Consensus       125 l~~k~vlVlG-aGG~g~aia~~L~~~G~~~v~i~~R~~~~a------~~la~~~~~~~~~~~i~~~~~~-~l~~~l~~--  194 (283)
T 3jyo_A          125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRA------QALADVINNAVGREAVVGVDAR-GIEDVIAA--  194 (283)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSSHHHH------HHHHHHHHHHHTSCCEEEECST-THHHHHHH--
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEECCHHHH------HHHHHHHHhhcCCceEEEcCHH-HHHHHHhc--
Confidence            4578999999 59999999999999999 799999998876      2222333311111112112212 45445543  


Q ss_pred             CCCccEEEeCCCchHH-----HHHHHhhccCCeEEEEcc
Q 018404          234 PEGIDIYFEHVGGKML-----DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       234 ~~~~d~vid~~g~~~~-----~~~~~~l~~~G~~v~~g~  267 (356)
                         +|+||+|+.....     ......++++..++.+-.
T Consensus       195 ---~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY  230 (283)
T 3jyo_A          195 ---ADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVY  230 (283)
T ss_dssp             ---SSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCC
T ss_pred             ---CCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecC
Confidence               8999999874211     111345666666555543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.77  E-value=0.015  Score=52.74  Aligned_cols=37  Identities=11%  Similarity=0.096  Sum_probs=33.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      +.+|||+||+|.+|..+++.+...|.+|++++++...
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   61 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTG   61 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence            5799999999999999999999999999999987553

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.77  E-value=0.003  Score=54.22  Aligned_cols=106  Identities=10%  Similarity=0.070  Sum_probs=68.4

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ....++.+||-.| + |.|..++.+++.+  +.+|++++.+++..      +.+.+.++ +.|....++.... +..+.+
T Consensus        68 ~~~~~~~~vLdiG-~-G~G~~~~~la~~~~~~~~v~~iD~~~~~~------~~a~~~~~-~~g~~~~i~~~~~-d~~~~l  137 (232)
T 3cbg_A           68 ISLTGAKQVLEIG-V-FRGYSALAMALQLPPDGQIIACDQDPNAT------AIAKKYWQ-KAGVAEKISLRLG-PALATL  137 (232)
T ss_dssp             HHHHTCCEEEEEC-C-TTSHHHHHHHTTSCTTCEEEEEESCHHHH------HHHHHHHH-HHTCGGGEEEEES-CHHHHH
T ss_pred             HHhcCCCEEEEec-C-CCCHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCcEEEEEc-CHHHHH
Confidence            3445678999998 4 4899999999987  57999999998876      11222233 3455321222222 444444


Q ss_pred             HHhC--C--CCccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          230 KRCF--P--EGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       230 ~~~~--~--~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+..  .  +.+|+||-....    ..+..+.+.|+++|.++.-..
T Consensus       138 ~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~  183 (232)
T 3cbg_A          138 EQLTQGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNV  183 (232)
T ss_dssp             HHHHTSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred             HHHHhcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4432  1  469999844332    357888999999999987543

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.77  E-value=0.0013  Score=55.05  Aligned_cols=144  Identities=16%  Similarity=0.175  Sum_probs=84.0

Q ss_pred             CCCCCEEEEccccceeEe-ecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHH-cCCCCCCEEEEecCCchHHHHH
Q 018404           96 FKKGDLVWGTTGWEEYSL-IKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI-CAPKKGEYIYVSAASGAVGQLV  173 (356)
Q Consensus        96 ~~~Gd~V~~~g~~~~~~~-v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~-~~~~~g~~VlI~ga~g~vG~~a  173 (356)
                      ++.|+.+.....|.+|.. .+... .+.+ +..+++.  .+.    ..+....+... ..+.++.+||-.| +|. |..+
T Consensus         6 ~~~~~~~~~~p~w~~~~~~~~~~~-~~~~-~~~~~f~--~~~----~~~~~~~~~~l~~~~~~~~~vLDiG-~G~-G~~~   75 (205)
T 3grz_A            6 INLSRHLAIVPEWEDYQPVFKDQE-IIRL-DPGLAFG--TGN----HQTTQLAMLGIERAMVKPLTVADVG-TGS-GILA   75 (205)
T ss_dssp             EEEETTEEEEETTCCCCCSSTTCE-EEEE-SCC-------CC----HHHHHHHHHHHHHHCSSCCEEEEET-CTT-SHHH
T ss_pred             EEECCcEEEeccccccccCCCCce-eEEe-cCCcccC--CCC----CccHHHHHHHHHHhccCCCEEEEEC-CCC-CHHH
Confidence            456676666677888877 66666 7888 5553232  211    11222222111 1157889999998 444 7777


Q ss_pred             HHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCC--EEEecCCcccHHHHHHHhCCCCccEEEeCCCchH
Q 018404          174 GQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFD--DAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKM  248 (356)
Q Consensus       174 i~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~--~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  248 (356)
                      ..+++.-..+|++++.+++..          +.+++   ..+..  .++..    ++.    +...+.+|+|+.......
T Consensus        76 ~~l~~~~~~~v~~vD~s~~~~----------~~a~~~~~~~~~~~v~~~~~----d~~----~~~~~~fD~i~~~~~~~~  137 (205)
T 3grz_A           76 IAAHKLGAKSVLATDISDESM----------TAAEENAALNGIYDIALQKT----SLL----ADVDGKFDLIVANILAEI  137 (205)
T ss_dssp             HHHHHTTCSEEEEEESCHHHH----------HHHHHHHHHTTCCCCEEEES----STT----TTCCSCEEEEEEESCHHH
T ss_pred             HHHHHCCCCEEEEEECCHHHH----------HHHHHHHHHcCCCceEEEec----ccc----ccCCCCceEEEECCcHHH
Confidence            777764334999999998876          44442   33443  22222    211    112347999997655443


Q ss_pred             ----HHHHHHhhccCCeEEEEcc
Q 018404          249 ----LDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       249 ----~~~~~~~l~~~G~~v~~g~  267 (356)
                          +..+.+.|+++|+++..+.
T Consensus       138 ~~~~l~~~~~~L~~gG~l~~~~~  160 (205)
T 3grz_A          138 LLDLIPQLDSHLNEDGQVIFSGI  160 (205)
T ss_dssp             HHHHGGGSGGGEEEEEEEEEEEE
T ss_pred             HHHHHHHHHHhcCCCCEEEEEec
Confidence                4556678899999987643

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.76  E-value=0.0045  Score=57.97  Aligned_cols=94  Identities=13%  Similarity=0.016  Sum_probs=56.8

Q ss_pred             cCCCCCCEEEEecCCchHHHH--HHHHHHHcCCEEEEEeCCcchhcccc------chhHHHHHHHhhcCCCE-E--EecC
Q 018404          152 CAPKKGEYIYVSAASGAVGQL--VGQFAKLMGCYVVGSAGSREKVWLIP------MQSQLVELLKNKFGFDD-A--FNYK  220 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~--ai~la~~~g~~Vi~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~-v--v~~~  220 (356)
                      .....|.++||+||++|+|++  .+......|++|+++.++......-+      +.+++.+.++ +.|... .  .|-.
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAK-KKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHH-HcCCcEEEEEeeCC
Confidence            445778999999999999998  55555555999999998754420000      1234445555 666532 2  2333


Q ss_pred             CcccHHHHHHHhC--CCCccEEEeCCCc
Q 018404          221 EENDLDAALKRCF--PEGIDIYFEHVGG  246 (356)
Q Consensus       221 ~~~~~~~~~~~~~--~~~~d~vid~~g~  246 (356)
                      +.++....+.+..  .|++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            4323333333322  1479999998875

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=96.75  E-value=0.0029  Score=55.38  Aligned_cols=94  Identities=12%  Similarity=0.039  Sum_probs=68.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~  232 (356)
                      .++.+||..| +|. |..+..+++.. +++|++++.+++..          +.++ +.+.. .++..+-. ++     ..
T Consensus        84 ~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~----------~~a~-~~~~~~~~~~~d~~-~~-----~~  144 (269)
T 1p91_A           84 DKATAVLDIG-CGE-GYYTHAFADALPEITTFGLDVSKVAI----------KAAA-KRYPQVTFCVASSH-RL-----PF  144 (269)
T ss_dssp             TTCCEEEEET-CTT-STTHHHHHHTCTTSEEEEEESCHHHH----------HHHH-HHCTTSEEEECCTT-SC-----SB
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHhCCCCeEEEEeCCHHHH----------HHHH-HhCCCcEEEEcchh-hC-----CC
Confidence            6788999999 666 99999999987 78999999998887          7777 44432 23222211 11     11


Q ss_pred             CCCCccEEEeCCCchHHHHHHHhhccCCeEEEEcc
Q 018404          233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ..+.+|+|+.......+..+.+.|+|+|+++....
T Consensus       145 ~~~~fD~v~~~~~~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          145 SDTSMDAIIRIYAPCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             CTTCEEEEEEESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCceeEEEEeCChhhHHHHHHhcCCCcEEEEEEc
Confidence            22379999965545789999999999999987653

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.74  E-value=0.0031  Score=55.65  Aligned_cols=95  Identities=23%  Similarity=0.252  Sum_probs=63.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~  235 (356)
                      +|||+||+|.+|...++.+...  |.+|++++++.++.          +.+. ..+...+ .|..+.    +.+.+... 
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------~~l~-~~~~~~~~~D~~d~----~~l~~~~~-   65 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA----------STLA-DQGVEVRHGDYNQP----ESLQKAFA-   65 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT----------HHHH-HTTCEEEECCTTCH----HHHHHHTT-
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH----------hHHh-hcCCeEEEeccCCH----HHHHHHHh-
Confidence            5899999999999999888877  89999999988776          5555 4454322 233332    23444333 


Q ss_pred             CccEEEeCCCc--------hHHHHHHHhhccC--CeEEEEcccc
Q 018404          236 GIDIYFEHVGG--------KMLDAVLLNMRLH--GRIAACGMIS  269 (356)
Q Consensus       236 ~~d~vid~~g~--------~~~~~~~~~l~~~--G~~v~~g~~~  269 (356)
                      ++|+||.+.+.        ......++.+...  ++++.++...
T Consensus        66 ~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           66 GVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             TCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             cCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            58999999884        1223444444443  4888887644

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.74  E-value=0.0013  Score=59.70  Aligned_cols=82  Identities=10%  Similarity=0.105  Sum_probs=52.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc------CCC-EE--EecCCcccHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF------GFD-DA--FNYKEENDLDA  227 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~------g~~-~v--v~~~~~~~~~~  227 (356)
                      +.+|+|+||+|++|.+++..+...|++|+.+.++....   ..   +.+.++ ..      +.. ..  .|..+.+++.+
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~---~~---~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~   74 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL---KT---QGRLWE-AARALACPPGSLETLQLDVRDSKSVAA   74 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCG---GG---THHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcH---HH---HHHHHH-HhhhccCCCCceEEEEecCCCHHHHHH
Confidence            56899999999999999999999999988877654432   01   112222 21      121 12  34444324444


Q ss_pred             HHHHhCCCCccEEEeCCC
Q 018404          228 ALKRCFPEGIDIYFEHVG  245 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g  245 (356)
                      .+.+...+.+|++|++.|
T Consensus        75 ~~~~~~~g~iD~lVnnAG   92 (327)
T 1jtv_A           75 ARERVTEGRVDVLVCNAG   92 (327)
T ss_dssp             HHHTCTTSCCSEEEECCC
T ss_pred             HHHHHhcCCCCEEEECCC
Confidence            455443347999999987

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.72  E-value=0.0025  Score=56.18  Aligned_cols=96  Identities=19%  Similarity=0.236  Sum_probs=62.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~  235 (356)
                      +|+|+||+|.+|...++.+...  |.+|++++++.++.          +.+. ..+...+ .|..+.    +.+.+... 
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------~~~~-~~~~~~~~~D~~d~----~~~~~~~~-   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA----------QALA-AQGITVRQADYGDE----AALTSALQ-   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC----------HHHH-HTTCEEEECCTTCH----HHHHHHTT-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh----------hhhh-cCCCeEEEcCCCCH----HHHHHHHh-
Confidence            4899999999999999888887  89999999988776          5555 4454322 233332    23444333 


Q ss_pred             CccEEEeCCCch------HHHHHHHhhccC--CeEEEEccccc
Q 018404          236 GIDIYFEHVGGK------MLDAVLLNMRLH--GRIAACGMISQ  270 (356)
Q Consensus       236 ~~d~vid~~g~~------~~~~~~~~l~~~--G~~v~~g~~~~  270 (356)
                      ++|+||.+.|..      .....++.+...  ++++.++....
T Consensus        65 ~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~  107 (286)
T 2zcu_A           65 GVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHA  107 (286)
T ss_dssp             TCSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTT
T ss_pred             CCCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCC
Confidence            589999998741      234444444432  58888876543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.70  E-value=0.0091  Score=53.95  Aligned_cols=78  Identities=15%  Similarity=0.230  Sum_probs=51.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--C-EE--EecCCcccHHHHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--D-DA--FNYKEENDLDAALKR  231 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~-~v--v~~~~~~~~~~~~~~  231 (356)
                      +.+|||+||+|.+|..+++.+...|++|++++++.++..    .    +.+. .++.  . ..  .|..+.+.+.+.+..
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~----~----~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~   73 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFA----S----WRLK-ELGIENDVKIIHMDLLEFSNIIRTIEK   73 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTT----T----HHHH-HTTCTTTEEECCCCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccc----c----ccHh-hccccCceeEEECCCCCHHHHHHHHHh
Confidence            568999999999999999888888999999998876530    0    2333 3321  1 11  233332133333333


Q ss_pred             hCCCCccEEEeCCCc
Q 018404          232 CFPEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~~~~d~vid~~g~  246 (356)
                      .   ++|+||.+.|.
T Consensus        74 ~---~~d~vih~A~~   85 (345)
T 2z1m_A           74 V---QPDEVYNLAAQ   85 (345)
T ss_dssp             H---CCSEEEECCCC
T ss_pred             c---CCCEEEECCCC
Confidence            2   58999999884

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.69  E-value=0.0037  Score=53.79  Aligned_cols=74  Identities=22%  Similarity=0.158  Sum_probs=50.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+|+|+||+|++|..+++.+...  |++|++++++.++.          +.+.  .+... ..|..+.    +.+.+.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~----------~~~~--~~~~~~~~D~~d~----~~~~~~   66 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK----------EKIG--GEADVFIGDITDA----DSINPA   66 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH----------HHTT--CCTTEEECCTTSH----HHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch----------hhcC--CCeeEEEecCCCH----HHHHHH
Confidence            4678999999999999999988888  89999999986664          3221  12222 2233332    223332


Q ss_pred             CCCCccEEEeCCCc
Q 018404          233 FPEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~~~~d~vid~~g~  246 (356)
                      .. ++|+||.+.|.
T Consensus        67 ~~-~~d~vi~~a~~   79 (253)
T 1xq6_A           67 FQ-GIDALVILTSA   79 (253)
T ss_dssp             HT-TCSEEEECCCC
T ss_pred             Hc-CCCEEEEeccc
Confidence            22 48999998873

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.68  E-value=0.011  Score=51.16  Aligned_cols=101  Identities=14%  Similarity=0.136  Sum_probs=69.5

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHh---hc-CCCEEEecCCcc
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKN---KF-GFDDAFNYKEEN  223 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~-g~~~vv~~~~~~  223 (356)
                      ....+.++++||-.| +| .|..+..+++..  +.+|++++.+++..          +.+++   .. |...+ +.... 
T Consensus        90 ~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~----------~~a~~~~~~~~g~~~v-~~~~~-  155 (258)
T 2pwy_A           90 TLLDLAPGMRVLEAG-TG-SGGLTLFLARAVGEKGLVESYEARPHHL----------AQAERNVRAFWQVENV-RFHLG-  155 (258)
T ss_dssp             HHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHH----------HHHHHHHHHHCCCCCE-EEEES-
T ss_pred             HHcCCCCCCEEEEEC-CC-cCHHHHHHHHHhCCCCEEEEEeCCHHHH----------HHHHHHHHHhcCCCCE-EEEEC-
Confidence            456789999999999 55 488999999986  57999999998877          55542   22 53221 11111 


Q ss_pred             cHHHHHHHhCCCCccEEEeCCCc--hHHHHHHHhhccCCeEEEEc
Q 018404          224 DLDAALKRCFPEGIDIYFEHVGG--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ++.+.  .+..+.+|+|+.....  ..+..+.+.|+++|+++.+.
T Consensus       156 d~~~~--~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          156 KLEEA--ELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             CGGGC--CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             chhhc--CCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            21111  1112379999976665  57899999999999998774

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.66  E-value=0.0074  Score=51.92  Aligned_cols=105  Identities=15%  Similarity=0.098  Sum_probs=67.6

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ....++.+||-+|  .+.|..++.+++.+  +.+|++++.+++..      +.+.+.++ +.|....+..... +..+.+
T Consensus        66 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~------~~a~~~~~-~~g~~~~i~~~~g-da~~~l  135 (237)
T 3c3y_A           66 LKLVNAKKTIEVG--VFTGYSLLLTALSIPDDGKITAIDFDREAY------EIGLPFIR-KAGVEHKINFIES-DAMLAL  135 (237)
T ss_dssp             HHHTTCCEEEEEC--CTTSHHHHHHHHHSCTTCEEEEEESCHHHH------HHHHHHHH-HTTCGGGEEEEES-CHHHHH
T ss_pred             HHhhCCCEEEEeC--CCCCHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCcEEEEEc-CHHHHH
Confidence            3445678999998  45788888999987  57999999998876      22223333 4465321222222 333333


Q ss_pred             HHhC-----CCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          230 KRCF-----PEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       230 ~~~~-----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ....     .+.+|+||-....    ..+..+.+.|+++|.++.-.
T Consensus       136 ~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          136 DNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             HHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence            3331     2479999865432    35788899999999988653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.57  E-value=0.015  Score=53.00  Aligned_cols=76  Identities=20%  Similarity=0.333  Sum_probs=50.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc----CCCE-EEecCCcccHHHHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF----GFDD-AFNYKEENDLDAALKR  231 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~-vv~~~~~~~~~~~~~~  231 (356)
                      +.+|||+||+|.+|..+++.+...|++|++++++.++.          ..+.+.+    +... ..|..+...+.+.+..
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   78 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV----------PSLFETARVADGMQSEIGDIRDQNKLLESIRE   78 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS----------SCHHHHTTTTTTSEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCccc----------chhhHhhccCCceEEEEccccCHHHHHHHHHh
Confidence            56899999999999999998888999999999987654          2222121    2211 1233332123333333


Q ss_pred             hCCCCccEEEeCCC
Q 018404          232 CFPEGIDIYFEHVG  245 (356)
Q Consensus       232 ~~~~~~d~vid~~g  245 (356)
                      .   ++|+||.+.|
T Consensus        79 ~---~~d~vih~A~   89 (357)
T 1rkx_A           79 F---QPEIVFHMAA   89 (357)
T ss_dssp             H---CCSEEEECCS
T ss_pred             c---CCCEEEECCC
Confidence            2   5899999998

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.56  E-value=0.0053  Score=55.56  Aligned_cols=95  Identities=17%  Similarity=0.125  Sum_probs=60.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|||+||+|.+|..+++.+...|.+|++++++.++.          +.+. ..+...+ .|..+.    +.+.+... ++
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~l~-~~~~~~~~~Dl~d~----~~~~~~~~-~~   78 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI----------QRLA-YLEPECRVAEMLDH----AGLERALR-GL   78 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG----------GGGG-GGCCEEEECCTTCH----HHHHHHTT-TC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh----------hhhc-cCCeEEEEecCCCH----HHHHHHHc-CC
Confidence            799999999999999999888999999999987765          4333 3344322 233332    23444333 59


Q ss_pred             cEEEeCCCchH----------------HHHHHHhhcc-C-CeEEEEcccc
Q 018404          238 DIYFEHVGGKM----------------LDAVLLNMRL-H-GRIAACGMIS  269 (356)
Q Consensus       238 d~vid~~g~~~----------------~~~~~~~l~~-~-G~~v~~g~~~  269 (356)
                      |+||.+.|...                ....++.+.+ + +++|.+++..
T Consensus        79 d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~  128 (342)
T 2x4g_A           79 DGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAY  128 (342)
T ss_dssp             SEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGG
T ss_pred             CEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHH
Confidence            99999988411                1233333333 3 6899887654

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.56  E-value=0.0057  Score=58.09  Aligned_cols=83  Identities=17%  Similarity=0.243  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHH---HHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAA---LKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~---~~~  231 (356)
                      ++.++||+||+|++|.++++.+...|++|+.+.++....       ++.+... +.+... .+|..+.+.+...   +.+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~-------~l~~~~~-~~~~~~~~~Dvtd~~~v~~~~~~~~~  283 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAE-------DLKRVAD-KVGGTALTLDVTADDAVDKITAHVTE  283 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHH-------HHHHHHH-HHTCEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHH-------HHHHHHH-HcCCeEEEEecCCHHHHHHHHHHHHH
Confidence            567999999999999999988888899999998764321       2223333 555532 2344443233333   333


Q ss_pred             hCCCCccEEEeCCCc
Q 018404          232 CFPEGIDIYFEHVGG  246 (356)
Q Consensus       232 ~~~~~~d~vid~~g~  246 (356)
                      ..++.+|++|.+.|.
T Consensus       284 ~~g~~id~lV~nAGv  298 (454)
T 3u0b_A          284 HHGGKVDILVNNAGI  298 (454)
T ss_dssp             HSTTCCSEEEECCCC
T ss_pred             HcCCCceEEEECCcc
Confidence            333359999999883

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.55  E-value=0.014  Score=53.36  Aligned_cols=37  Identities=19%  Similarity=0.152  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH--cCCEEEEEeCCcc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKL--MGCYVVGSAGSRE  192 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~--~g~~Vi~~~~~~~  192 (356)
                      .+.+|||+||+|.+|..+++.+..  .|++|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            467999999999999999988888  8999999998654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.54  E-value=0.0084  Score=54.65  Aligned_cols=77  Identities=13%  Similarity=0.179  Sum_probs=53.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHc-CC-EEEEEeCCcchhccccchhHHHHHHHhhcCC-C-EEE--ecCCcccHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLM-GC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGF-D-DAF--NYKEENDLDAA  228 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~-g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~-~vv--~~~~~~~~~~~  228 (356)
                      -.+.+|||+||+|.+|..+++.+... |+ +|+++++++.+.          +.+.+.+.. . ..+  |..+.    +.
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~----------~~~~~~~~~~~v~~~~~Dl~d~----~~   84 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQ----------SEMAMEFNDPRMRFFIGDVRDL----ER   84 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHH----------HHHHHHHCCTTEEEEECCTTCH----HH
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhH----------HHHHHHhcCCCEEEEECCCCCH----HH
Confidence            35689999999999999999888888 98 999999987765          444423321 1 122  33332    23


Q ss_pred             HHHhCCCCccEEEeCCCc
Q 018404          229 LKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g~  246 (356)
                      +.+... ++|+||.+.|.
T Consensus        85 l~~~~~-~~D~Vih~Aa~  101 (344)
T 2gn4_A           85 LNYALE-GVDICIHAAAL  101 (344)
T ss_dssp             HHHHTT-TCSEEEECCCC
T ss_pred             HHHHHh-cCCEEEECCCC
Confidence            444433 59999999984

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.53  E-value=0.0083  Score=50.79  Aligned_cols=110  Identities=14%  Similarity=0.043  Sum_probs=69.2

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL  225 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  225 (356)
                      +.......++.+||-.|  .|.|..++.+++.+  +++|++++.+++..      +.+.+.+. ..|....+..... +.
T Consensus        50 l~~l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~------~~a~~~~~-~~~~~~~v~~~~~-d~  119 (223)
T 3duw_A           50 LQLLVQIQGARNILEIG--TLGGYSTIWLARGLSSGGRVVTLEASEKHA------DIARSNIE-RANLNDRVEVRTG-LA  119 (223)
T ss_dssp             HHHHHHHHTCSEEEEEC--CTTSHHHHHHHTTCCSSCEEEEEESCHHHH------HHHHHHHH-HTTCTTTEEEEES-CH
T ss_pred             HHHHHHhhCCCEEEEec--CCccHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCcEEEEEc-CH
Confidence            33334456788999998  45788888999987  67999999998876      22223333 4465321222121 33


Q ss_pred             HHHHHHhC---CCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          226 DAALKRCF---PEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       226 ~~~~~~~~---~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+.+....   .+.+|+||-....    ..+..+.+.|+|+|.++.-..
T Consensus       120 ~~~~~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  168 (223)
T 3duw_A          120 LDSLQQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNV  168 (223)
T ss_dssp             HHHHHHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred             HHHHHHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            33333321   1369999854432    367888999999998876543

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.52  E-value=0.016  Score=47.24  Aligned_cols=101  Identities=20%  Similarity=0.231  Sum_probs=67.1

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLD  226 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~  226 (356)
                      ....+.++++||-.| +|. |..+..+++.. .+|++++.+++..          +.+++   ..+...-+..... ++.
T Consensus        27 ~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~-~~v~~~D~~~~~~----------~~a~~~~~~~~~~~~~~~~~~-d~~   92 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVG-CGT-GGVTLELAGRV-RRVYAIDRNPEAI----------STTEMNLQRHGLGDNVTLMEG-DAP   92 (192)
T ss_dssp             HHHCCCTTCEEEEES-CTT-SHHHHHHHTTS-SEEEEEESCHHHH----------HHHHHHHHHTTCCTTEEEEES-CHH
T ss_pred             HhcCCCCCCEEEEEC-CCC-CHHHHHHHHhc-CEEEEEECCHHHH----------HHHHHHHHHcCCCcceEEEec-CHH
Confidence            445788999999998 554 88888888876 8999999998876          44442   3444111111111 443


Q ss_pred             HHHHHhCCCCccEEEeCCC----chHHHHHHHhhccCCeEEEEc
Q 018404          227 AALKRCFPEGIDIYFEHVG----GKMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g----~~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +.+...  +.+|+|+....    ...+..+.+.|+++|+++...
T Consensus        93 ~~~~~~--~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           93 EALCKI--PDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             HHHTTS--CCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             HhcccC--CCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            323221  36999997654    246788889999999988764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.50  E-value=0.0076  Score=50.13  Aligned_cols=33  Identities=21%  Similarity=0.229  Sum_probs=29.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +|+|+||+|++|.+.++.+. .|++|++++++.+
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~   37 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG   37 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc
Confidence            79999999999999998888 8999999988743

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.49  E-value=0.018  Score=51.69  Aligned_cols=87  Identities=21%  Similarity=0.219  Sum_probs=65.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++.++           +.+. +.|+...       ++.+.+.+    
T Consensus       141 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~-----------~~~~-~~g~~~~-------~l~ell~~----  196 (307)
T 1wwk_A          141 EGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNE-----------ERAK-EVNGKFV-------DLETLLKE----  196 (307)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-----------HHHH-HTTCEEC-------CHHHHHHH----
T ss_pred             CCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCCh-----------hhHh-hcCcccc-------CHHHHHhh----
Confidence            467999999 8999999999999999999999987665           3344 6675321       33444443    


Q ss_pred             CccEEEeCCCc-h----HH-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|+.++.. .    .+ ...+..|++++.++.++.
T Consensus       197 -aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          197 -SDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             -CSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             -CCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence             7899988774 2    12 456788999999998876

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.49  E-value=0.0073  Score=58.46  Aligned_cols=92  Identities=10%  Similarity=-0.025  Sum_probs=56.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEE-eCCcch-------hccccchhHHHHHHHhhcCCCE---EEecC
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGS-AGSREK-------VWLIPMQSQLVELLKNKFGFDD---AFNYK  220 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~-~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~---vv~~~  220 (356)
                      .++++.++||+||+|++|..+++.+...|++ |+.+ .++...       ....+..+++.+.++ +.|...   ..|..
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDLT  325 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCTT
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCCC
Confidence            3577899999999999999999888888996 6666 666311       000011233445555 566532   12334


Q ss_pred             CcccHHHHHHHhCC-CCccEEEeCCC
Q 018404          221 EENDLDAALKRCFP-EGIDIYFEHVG  245 (356)
Q Consensus       221 ~~~~~~~~~~~~~~-~~~d~vid~~g  245 (356)
                      +.+.+...+.+... +++|.||.+.|
T Consensus       326 d~~~v~~~~~~i~~~g~id~vVh~AG  351 (525)
T 3qp9_A          326 DAEAAARLLAGVSDAHPLSAVLHLPP  351 (525)
T ss_dssp             SHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCc
Confidence            43244444554432 37999999998

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.48  E-value=0.035  Score=42.81  Aligned_cols=94  Identities=16%  Similarity=0.148  Sum_probs=59.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      +.+|+|.| .|.+|...++.+...|.+|+++++++++.          +.+.++++.. ++..+.. + .+.+.+..-.+
T Consensus         4 ~m~i~IiG-~G~iG~~~a~~L~~~g~~v~~~d~~~~~~----------~~~~~~~~~~-~~~~d~~-~-~~~l~~~~~~~   69 (140)
T 1lss_A            4 GMYIIIAG-IGRVGYTLAKSLSEKGHDIVLIDIDKDIC----------KKASAEIDAL-VINGDCT-K-IKTLEDAGIED   69 (140)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHCSSE-EEESCTT-S-HHHHHHTTTTT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHH----------HHHHHhcCcE-EEEcCCC-C-HHHHHHcCccc
Confidence            35799998 69999999999999999999999988876          6665345653 2322211 1 12233321236


Q ss_pred             ccEEEeCCCchHH----HHHHHhhccCCeEEEE
Q 018404          237 IDIYFEHVGGKML----DAVLLNMRLHGRIAAC  265 (356)
Q Consensus       237 ~d~vid~~g~~~~----~~~~~~l~~~G~~v~~  265 (356)
                      +|+||.|++....    ....+.+.+ ++++..
T Consensus        70 ~d~vi~~~~~~~~~~~~~~~~~~~~~-~~ii~~  101 (140)
T 1lss_A           70 ADMYIAVTGKEEVNLMSSLLAKSYGI-NKTIAR  101 (140)
T ss_dssp             CSEEEECCSCHHHHHHHHHHHHHTTC-CCEEEE
T ss_pred             CCEEEEeeCCchHHHHHHHHHHHcCC-CEEEEE
Confidence            9999999997532    233344444 355543

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.47  E-value=0.02  Score=49.80  Aligned_cols=95  Identities=18%  Similarity=0.189  Sum_probs=64.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLDAALK  230 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~~~~~  230 (356)
                      +.++++||-.| +|. |..++.+++ .|++|++++.++...          +.+++   ..+..  +..... ++.+.+ 
T Consensus       118 ~~~~~~VLDiG-cG~-G~l~~~la~-~g~~v~gvDi~~~~v----------~~a~~n~~~~~~~--v~~~~~-d~~~~~-  180 (254)
T 2nxc_A          118 LRPGDKVLDLG-TGS-GVLAIAAEK-LGGKALGVDIDPMVL----------PQAEANAKRNGVR--PRFLEG-SLEAAL-  180 (254)
T ss_dssp             CCTTCEEEEET-CTT-SHHHHHHHH-TTCEEEEEESCGGGH----------HHHHHHHHHTTCC--CEEEES-CHHHHG-
T ss_pred             cCCCCEEEEec-CCC-cHHHHHHHH-hCCeEEEEECCHHHH----------HHHHHHHHHcCCc--EEEEEC-ChhhcC-
Confidence            67899999999 544 777777776 577999999998876          44442   23443  122111 333322 


Q ss_pred             HhCCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          231 RCFPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       231 ~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                        ..+.+|+|+...-.    ..+..+.+.|+|+|+++..+.
T Consensus       181 --~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          181 --PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             --GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence              23479999975432    356788889999999998765

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.44  E-value=0.018  Score=50.80  Aligned_cols=100  Identities=10%  Similarity=0.014  Sum_probs=66.9

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLD  226 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~  226 (356)
                      ....+.++.+||-+| + |.|..+..+++..|++|++++.+++..          +.+++   +.|...-+..... ++ 
T Consensus        58 ~~~~~~~~~~vLDiG-c-G~G~~~~~l~~~~~~~v~gvd~s~~~~----------~~a~~~~~~~~~~~~~~~~~~-d~-  123 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVG-C-GWGATMMRAVEKYDVNVVGLTLSKNQA----------NHVQQLVANSENLRSKRVLLA-GW-  123 (287)
T ss_dssp             TTTTCCTTCEEEEET-C-TTSHHHHHHHHHHCCEEEEEESCHHHH----------HHHHHHHHTCCCCSCEEEEES-CG-
T ss_pred             HHcCCCCcCEEEEEC-C-cccHHHHHHHHHcCCEEEEEECCHHHH----------HHHHHHHHhcCCCCCeEEEEC-Ch-
Confidence            445678899999998 4 448888899988899999999998877          55542   2343211111111 22 


Q ss_pred             HHHHHhCCCCccEEEeC-----CC--c--hHHHHHHHhhccCCeEEEEcc
Q 018404          227 AALKRCFPEGIDIYFEH-----VG--G--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~-----~g--~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                         .+.. +.+|+|+..     .+  .  ..+..+.+.|+|+|+++....
T Consensus       124 ---~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          124 ---EQFD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             ---GGCC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             ---hhCC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence               1121 569999864     22  1  467888999999999986543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.44  E-value=0.016  Score=53.23  Aligned_cols=90  Identities=13%  Similarity=0.028  Sum_probs=58.5

Q ss_pred             CCCCEEEEecCCchHHHHH-HHHHHHcCCEEEEEeCCcchhcc------ccchhHHHHHHHhhcCCCE-EEec--CCcc-
Q 018404          155 KKGEYIYVSAASGAVGQLV-GQFAKLMGCYVVGSAGSREKVWL------IPMQSQLVELLKNKFGFDD-AFNY--KEEN-  223 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~a-i~la~~~g~~Vi~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~-vv~~--~~~~-  223 (356)
                      ..++++||+||++|+|+++ +.+|...|+.++++....+....      ..+.+++.+.++ +.|... .++.  .+.+ 
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~-~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAK-REGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HHTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHH-HcCCCceeEeCCCCCHHH
Confidence            4568999999999999975 45666779999999876553210      124556667777 777643 3332  2221 


Q ss_pred             --cHHHHHHHhCCCCccEEEeCCCc
Q 018404          224 --DLDAALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       224 --~~~~~~~~~~~~~~d~vid~~g~  246 (356)
                        .+.+.+++. .|++|+++.+.+.
T Consensus       127 i~~vi~~i~~~-~G~IDiLVhS~A~  150 (401)
T 4ggo_A          127 KAQVIEEAKKK-GIKFDLIVYSLAS  150 (401)
T ss_dssp             HHHHHHHHHHT-TCCEEEEEECCCC
T ss_pred             HHHHHHHHHHh-cCCCCEEEEeccc
Confidence              233334443 2489999998885

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.42  E-value=0.0043  Score=53.74  Aligned_cols=101  Identities=16%  Similarity=0.119  Sum_probs=66.5

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLD  226 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~  226 (356)
                      ....+.++.+||=.| +|. |..+..+++..+++|++++.+++.+      +.+.+.++ ..|..   .++..+-. ++ 
T Consensus        30 ~~~~~~~~~~VLDiG-cG~-G~~~~~la~~~~~~v~gvD~s~~~l------~~a~~~~~-~~~~~~~v~~~~~d~~-~~-   98 (256)
T 1nkv_A           30 RVLRMKPGTRILDLG-SGS-GEMLCTWARDHGITGTGIDMSSLFT------AQAKRRAE-ELGVSERVHFIHNDAA-GY-   98 (256)
T ss_dssp             HHTCCCTTCEEEEET-CTT-CHHHHHHHHHTCCEEEEEESCHHHH------HHHHHHHH-HTTCTTTEEEEESCCT-TC-
T ss_pred             HhcCCCCCCEEEEEC-CCC-CHHHHHHHHhcCCeEEEEeCCHHHH------HHHHHHHH-hcCCCcceEEEECChH-hC-
Confidence            456788999999998 444 8888999998899999999998876      22222233 34542   12221111 11 


Q ss_pred             HHHHHhCCCCccEEEeCCC-----c--hHHHHHHHhhccCCeEEEEc
Q 018404          227 AALKRCFPEGIDIYFEHVG-----G--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                         .  ..+.+|+|+....     .  ..+..+.+.|+|+|+++...
T Consensus        99 ---~--~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A           99 ---V--ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             ---C--CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ---C--cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence               0  1247999985221     1  45788899999999998754

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.41  E-value=0.0079  Score=50.96  Aligned_cols=107  Identities=11%  Similarity=0.080  Sum_probs=68.2

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA  228 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  228 (356)
                      .....++.+||=.|  .|.|..++.+++.+  +.+|++++.+++..      +.+.+.++ ..|....+..... +..+.
T Consensus        59 l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~------~~a~~~~~-~~~~~~~v~~~~~-d~~~~  128 (225)
T 3tr6_A           59 LVKLMQAKKVIDIG--TFTGYSAIAMGLALPKDGTLITCDVDEKST------ALAKEYWE-KAGLSDKIGLRLS-PAKDT  128 (225)
T ss_dssp             HHHHHTCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHH------HHHHHHHH-HTTCTTTEEEEES-CHHHH
T ss_pred             HHHhhCCCEEEEeC--CcchHHHHHHHHhCCCCCEEEEEeCCHHHH------HHHHHHHH-HCCCCCceEEEeC-CHHHH
Confidence            34455788999998  34588899999886  57999999998876      22223333 4455321222122 34344


Q ss_pred             HHHhCC----CCccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          229 LKRCFP----EGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       229 ~~~~~~----~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      +.....    +.+|+||-....    ..+..+.+.|+|+|.++....
T Consensus       129 ~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~  175 (225)
T 3tr6_A          129 LAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNV  175 (225)
T ss_dssp             HHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred             HHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            433321    479999854442    357888899999999986543

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.40  E-value=0.013  Score=51.61  Aligned_cols=94  Identities=13%  Similarity=0.052  Sum_probs=60.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      ++.+++|+|+ |++|.++++.+...|++|+++.++.++.          +.+.++++....++..+.++    +.+   +
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~----------~~la~~~~~~~~~~~~~~~~----~~~---~  179 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRA----------EELAKLFAHTGSIQALSMDE----LEG---H  179 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH----------HHHHHHTGGGSSEEECCSGG----GTT---C
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHH----------HHHHHHhhccCCeeEecHHH----hcc---C
Confidence            5789999995 8999999999999999999999998876          44443554310111111101    111   4


Q ss_pred             CccEEEeCCCchHHHH----HHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGGKMLDA----VLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~~~~~~----~~~~l~~~G~~v~~g~  267 (356)
                      ++|++++|+|......    ....++++..++.+..
T Consensus       180 ~~DivVn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          180 EFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             CCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred             CCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            6999999999743210    1123555566666654

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.40  E-value=0.0078  Score=57.37  Aligned_cols=91  Identities=18%  Similarity=0.195  Sum_probs=68.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      .-.|.+|.|.| .|.+|..+++.++.+|++|++.+++..+.          .... ..|.. +.      ++.+.+.   
T Consensus       274 ~L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~v~d~~~~~~----------~~a~-~~G~~-~~------~l~ell~---  331 (494)
T 3d64_A          274 MIAGKIAVVAG-YGDVGKGCAQSLRGLGATVWVTEIDPICA----------LQAA-MEGYR-VV------TMEYAAD---  331 (494)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSCHHHH----------HHHH-TTTCE-EC------CHHHHTT---
T ss_pred             ccCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCChHhH----------HHHH-HcCCE-eC------CHHHHHh---
Confidence            34688999999 89999999999999999999999887653          3344 44553 11      3333333   


Q ss_pred             CCCccEEEeCCCc-hHH-HHHHHhhccCCeEEEEccc
Q 018404          234 PEGIDIYFEHVGG-KML-DAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       234 ~~~~d~vid~~g~-~~~-~~~~~~l~~~G~~v~~g~~  268 (356)
                        ..|+|+.+++. ..+ ...++.|+++..++.+|..
T Consensus       332 --~aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          332 --KADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             --TCSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred             --cCCEEEECCCcccccCHHHHhhCCCCcEEEEcCCC
Confidence              48999999876 333 4778899999999999873

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.40  E-value=0.014  Score=59.50  Aligned_cols=89  Identities=17%  Similarity=0.186  Sum_probs=60.4

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAK-LMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAA  228 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~-~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~  228 (356)
                      +.++.+++|.||+|++|.+.++.+. ..|+ +|+.++++....   +..+++.+.++ ..|....   .|-.+.+++...
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~---~~~~~~~~~l~-~~G~~v~~~~~Dvsd~~~v~~~  602 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAA---SGAAELVAQLT-AYGAEVSLQACDVADRETLAKV  602 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGS---TTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHH
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccch---HHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHH
Confidence            3578899999999999999998776 7899 588888874432   22234445566 6676322   244444345555


Q ss_pred             HHHhCCC-CccEEEeCCCc
Q 018404          229 LKRCFPE-GIDIYFEHVGG  246 (356)
Q Consensus       229 ~~~~~~~-~~d~vid~~g~  246 (356)
                      +.+.... ++|++|++.|.
T Consensus       603 ~~~~~~~~~id~lVnnAGv  621 (795)
T 3slk_A          603 LASIPDEHPLTAVVHAAGV  621 (795)
T ss_dssp             HHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHhCCCEEEEECCCc
Confidence            5555433 79999999883

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.38  E-value=0.11  Score=47.10  Aligned_cols=135  Identities=12%  Similarity=0.189  Sum_probs=78.6

Q ss_pred             CEEEEecCCchHHHHHHHHHH-Hc-CCEEEEEe-CCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAK-LM-GCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~-~~-g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      -+|.|+| .|.+|...++.++ .. ++++++++ +++++.          +.+.+++|...+.+     ++.+.+..   
T Consensus         9 ~~v~iiG-~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~----------~~~a~~~g~~~~~~-----~~~~~l~~---   69 (346)
T 3cea_A            9 LRAAIIG-LGRLGERHARHLVNKIQGVKLVAACALDSNQL----------EWAKNELGVETTYT-----NYKDMIDT---   69 (346)
T ss_dssp             EEEEEEC-CSTTHHHHHHHHHHTCSSEEEEEEECSCHHHH----------HHHHHTTCCSEEES-----CHHHHHTT---
T ss_pred             ceEEEEc-CCHHHHHHHHHHHhcCCCcEEEEEecCCHHHH----------HHHHHHhCCCcccC-----CHHHHhcC---
Confidence            4799999 7999998887776 44 77876654 455554          44443677754432     44433321   


Q ss_pred             CCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH---H-hh-cceeeceeeecchhhHHHHH
Q 018404          235 EGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV---V-YK-RIRMEGFVVFDYFPQYSRFL  308 (356)
Q Consensus       235 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~---~-~~-~~~~~~~~~~~~~~~~~~~l  308 (356)
                      ..+|+|+.|+.. .+...+..+|+.+-+ |.+..+...      .......+   . .+ ++.+..    .+...+...+
T Consensus        70 ~~~D~V~i~tp~~~h~~~~~~al~~G~~-v~~eKp~~~------~~~~~~~l~~~a~~~~~~~~~~----~~~~r~~p~~  138 (346)
T 3cea_A           70 ENIDAIFIVAPTPFHPEMTIYAMNAGLN-VFCEKPLGL------DFNEVDEMAKVIKSHPNQIFQS----GFMRRYDDSY  138 (346)
T ss_dssp             SCCSEEEECSCGGGHHHHHHHHHHTTCE-EEECSCCCS------CHHHHHHHHHHHHTCTTSCEEC----CCGGGTCHHH
T ss_pred             CCCCEEEEeCChHhHHHHHHHHHHCCCE-EEEcCCCCC------CHHHHHHHHHHHHhCCCCeEEE----ecccccCHHH
Confidence            269999999998 577778888877544 445432110      01111111   1 22 332211    1122234557


Q ss_pred             HHHHHHHHcCCCcc
Q 018404          309 DAVLPYIREGKVVY  322 (356)
Q Consensus       309 ~~~~~~~~~g~l~~  322 (356)
                      +.+.+++++|.+-.
T Consensus       139 ~~~~~~i~~g~iG~  152 (346)
T 3cea_A          139 RYAKKIVDNGDIGK  152 (346)
T ss_dssp             HHHHHHHHTTTTCS
T ss_pred             HHHHHHHHcCCCCC
Confidence            88888888887643

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.38  E-value=0.0096  Score=54.81  Aligned_cols=91  Identities=12%  Similarity=0.127  Sum_probs=64.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      +|+|+|+ |.+|..+++.+.. ..+|.+.+++.+++          +.++ +......+|..+.    +.+.+... +.|
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~----------~~~~-~~~~~~~~d~~d~----~~l~~~~~-~~D   79 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENL----------EKVK-EFATPLKVDASNF----DKLVEVMK-EFE   79 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHH----------HHHT-TTSEEEECCTTCH----HHHHHHHT-TCS
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHH----------HHHh-ccCCcEEEecCCH----HHHHHHHh-CCC
Confidence            6999995 9999998887754 56899889888877          6665 4432333454443    22333322 489


Q ss_pred             EEEeCCCc-hHHHHHHHhhccCCeEEEEcc
Q 018404          239 IYFEHVGG-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       239 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      +|++|++. -....+-.|+..+-+++.+..
T Consensus        80 vVi~~~p~~~~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           80 LVIGALPGFLGFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             EEEECCCGGGHHHHHHHHHHHTCEEEECCC
T ss_pred             EEEEecCCcccchHHHHHHhcCcceEeeec
Confidence            99999998 456667778888889998764

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.37  E-value=0.009  Score=52.51  Aligned_cols=95  Identities=13%  Similarity=0.024  Sum_probs=62.2

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +||+..-++..|.+...--.|.+++|.|+++.+|..+++++...|++|++..+....+                      
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L----------------------  197 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDL----------------------  197 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH----------------------
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhH----------------------
Confidence            3444344444454433335789999999777799999999999999988776442222                      


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                               .+.++     .+|+||.++|...+ ---+.++++..++.+|..
T Consensus       198 ---------~~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~  234 (285)
T 3p2o_A          198 ---------SLYTR-----QADLIIVAAGCVNL-LRSDMVKEGVIVVDVGIN  234 (285)
T ss_dssp             ---------HHHHT-----TCSEEEECSSCTTC-BCGGGSCTTEEEEECCCE
T ss_pred             ---------HHHhh-----cCCEEEECCCCCCc-CCHHHcCCCeEEEEeccC
Confidence                     11222     26888888886422 112456888888888863

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.36  E-value=0.017  Score=52.47  Aligned_cols=101  Identities=22%  Similarity=0.233  Sum_probs=61.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~  235 (356)
                      ..+|||+||+|.+|..+++.+...|.+|++++++....   +...+..+.+. ..++..+ .|..+.+.+.+.+.+.   
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~---~~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~~~---   82 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS---PSKAKIFKALE-DKGAIIVYGLINEQEAMEKILKEH---   82 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCC---HHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHHHT---
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCC---hhHHHHHHHHH-hCCcEEEEeecCCHHHHHHHHhhC---
Confidence            35799999999999999999988999999999976211   00011112233 3455322 2444332344444321   


Q ss_pred             CccEEEeCCCch---HHHHHHHhhccCC---eEEE
Q 018404          236 GIDIYFEHVGGK---MLDAVLLNMRLHG---RIAA  264 (356)
Q Consensus       236 ~~d~vid~~g~~---~~~~~~~~l~~~G---~~v~  264 (356)
                      ++|+||.+.+..   .....++.++..|   +++.
T Consensus        83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            699999999962   3345555555444   6653

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.36  E-value=0.0037  Score=56.82  Aligned_cols=102  Identities=16%  Similarity=0.172  Sum_probs=65.3

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHh---hcC------------
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKN---KFG------------  212 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g------------  212 (356)
                      ....+.+|++||-.| +|. |..++.+++..|  .+|++++.++...          +.+++   .++            
T Consensus        99 ~~l~~~~g~~VLDiG-~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~----------~~a~~~~~~~~~~~~ln~~~~~~  166 (336)
T 2b25_A           99 SMMDINPGDTVLEAG-SGS-GGMSLFLSKAVGSQGRVISFEVRKDHH----------DLAKKNYKHWRDSWKLSHVEEWP  166 (336)
T ss_dssp             HHHTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESSHHHH----------HHHHHHHHHHHHHHTTTCSSCCC
T ss_pred             HhcCCCCCCEEEEeC-CCc-CHHHHHHHHHhCCCceEEEEeCCHHHH----------HHHHHHHHHhhcccccccccccC
Confidence            345789999999998 555 888888999876  6999999998876          44432   221            


Q ss_pred             CC-EEEecCCcccHHHHHHHhCCCCccEEEeCCCc--hHHHHHHHhhccCCeEEEEcc
Q 018404          213 FD-DAFNYKEENDLDAALKRCFPEGIDIYFEHVGG--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       213 ~~-~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .. .++..    ++.+.+..+..+.+|+||-....  ..+..+.+.|+|+|+++.+..
T Consensus       167 ~~v~~~~~----d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          167 DNVDFIHK----DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             CCEEEEES----CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             CceEEEEC----ChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            11 12221    11111111222369999876554  468899999999999986643

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.36  E-value=0.0053  Score=53.34  Aligned_cols=100  Identities=9%  Similarity=0.013  Sum_probs=68.9

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--C-EEEecCCcccHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--D-DAFNYKEENDLD  226 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~  226 (356)
                      ....+.++.+||-.| +| .|..+..+++..+++|++++.+++..          +.+++....  . .++..+-. ++ 
T Consensus        49 ~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~v~~vD~s~~~~----------~~a~~~~~~~~~~~~~~~d~~-~~-  114 (266)
T 3ujc_A           49 SDIELNENSKVLDIG-SG-LGGGCMYINEKYGAHTHGIDICSNIV----------NMANERVSGNNKIIFEANDIL-TK-  114 (266)
T ss_dssp             TTCCCCTTCEEEEET-CT-TSHHHHHHHHHHCCEEEEEESCHHHH----------HHHHHTCCSCTTEEEEECCTT-TC-
T ss_pred             HhcCCCCCCEEEEEC-CC-CCHHHHHHHHHcCCEEEEEeCCHHHH----------HHHHHHhhcCCCeEEEECccc-cC-
Confidence            445678899999999 44 78889999998899999999998887          777733321  1 12211111 10 


Q ss_pred             HHHHHhCCCCccEEEeCCCc---------hHHHHHHHhhccCCeEEEEcc
Q 018404          227 AALKRCFPEGIDIYFEHVGG---------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                          ....+.+|+|+.+..-         ..+..+.+.|+|+|+++....
T Consensus       115 ----~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          115 ----EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             ----CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ----CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence                1112379999975432         256888999999999987754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.35  E-value=0.014  Score=53.47  Aligned_cols=75  Identities=11%  Similarity=0.069  Sum_probs=51.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecC-CcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYK-EENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~-~~~~~~~~~~~~~  233 (356)
                      +.+|||+||+|.+|..+++.+... |.+|++++++.++.          ..+.+..+...+ .|.. +.+.+.+.++   
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----------~~~~~~~~v~~~~~Dl~~d~~~~~~~~~---   90 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL----------GDLVKHERMHFFEGDITINKEWVEYHVK---   90 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT----------GGGGGSTTEEEEECCTTTCHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh----------hhhccCCCeEEEeCccCCCHHHHHHHhc---
Confidence            468999999999999999888887 89999999988775          433311233222 2443 3212333333   


Q ss_pred             CCCccEEEeCCCc
Q 018404          234 PEGIDIYFEHVGG  246 (356)
Q Consensus       234 ~~~~d~vid~~g~  246 (356)
                        ++|+||.+.+.
T Consensus        91 --~~d~Vih~A~~  101 (372)
T 3slg_A           91 --KCDVILPLVAI  101 (372)
T ss_dssp             --HCSEEEECBCC
T ss_pred             --cCCEEEEcCcc
Confidence              48999998874

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.34  E-value=0.02  Score=51.49  Aligned_cols=88  Identities=23%  Similarity=0.186  Sum_probs=64.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      -.|.+|.|+| .|.+|...++.++.+|++|++.+++.++.           .+. ++|...    .   ++.+.+.+   
T Consensus       140 l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-----------~~~-~~g~~~----~---~l~ell~~---  196 (313)
T 2ekl_A          140 LAGKTIGIVG-FGRIGTKVGIIANAMGMKVLAYDILDIRE-----------KAE-KINAKA----V---SLEELLKN---  196 (313)
T ss_dssp             CTTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSSCCHH-----------HHH-HTTCEE----C---CHHHHHHH---
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCcchh-----------HHH-hcCcee----c---CHHHHHhh---
Confidence            3578999999 89999999999999999999999887653           344 667532    1   33444443   


Q ss_pred             CCccEEEeCCCc-h----HH-HHHHHhhccCCeEEEEcc
Q 018404          235 EGIDIYFEHVGG-K----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g~-~----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                        .|+|+.++.. .    .+ ...+..|++++.++.++.
T Consensus       197 --aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          197 --SDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             --CSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             --CCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence              6888888774 2    12 456778888888888876

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.33  E-value=0.011  Score=51.92  Aligned_cols=95  Identities=18%  Similarity=0.112  Sum_probs=61.3

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +||+..-+...|.+..---.|.+++|.|+++.+|..+++++..+|++|++..+....                       
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~-----------------------  197 (285)
T 3l07_A          141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTD-----------------------  197 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS-----------------------
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchh-----------------------
Confidence            344444444455443333478999999977779999999999999998766533222                       


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                              +.+.++     .+|+||.++|...+ ---..++++..++.+|..
T Consensus       198 --------L~~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  235 (285)
T 3l07_A          198 --------LKSHTT-----KADILIVAVGKPNF-ITADMVKEGAVVIDVGIN  235 (285)
T ss_dssp             --------HHHHHT-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred             --------HHHhcc-----cCCEEEECCCCCCC-CCHHHcCCCcEEEEeccc
Confidence                    122222     26888888886422 112456888888888863

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.32  E-value=0.0088  Score=56.79  Aligned_cols=91  Identities=19%  Similarity=0.216  Sum_probs=68.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      .-.|.+|.|.| .|.+|..+++.++.+|++|++.+++..+.          .... ..|.. +.      ++.+.+.   
T Consensus       254 ~l~GktVgIIG-~G~IG~~vA~~l~~~G~~Viv~d~~~~~~----------~~a~-~~g~~-~~------~l~ell~---  311 (479)
T 1v8b_A          254 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICA----------IQAV-MEGFN-VV------TLDEIVD---  311 (479)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHH----------HHHH-TTTCE-EC------CHHHHTT---
T ss_pred             ccCCCEEEEEe-eCHHHHHHHHHHHhCcCEEEEEeCChhhH----------HHHH-HcCCE-ec------CHHHHHh---
Confidence            35689999999 89999999999999999999999887764          3444 55552 11      3333333   


Q ss_pred             CCCccEEEeCCCc-hHH-HHHHHhhccCCeEEEEccc
Q 018404          234 PEGIDIYFEHVGG-KML-DAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       234 ~~~~d~vid~~g~-~~~-~~~~~~l~~~G~~v~~g~~  268 (356)
                        ..|+|+-+.+. ..+ ...++.|+++..++.+|..
T Consensus       312 --~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          312 --KGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             --TCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             --cCCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence              48999999876 333 4677889999999999863

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.32  E-value=0.021  Score=52.08  Aligned_cols=97  Identities=14%  Similarity=0.131  Sum_probs=61.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-------------EecCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-------------FNYKE  221 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-------------v~~~~  221 (356)
                      -+|++|.|.| .|.+|+.+++.++.+|++|++.+.+.++.          +..+ ++++..+             +....
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~~----------~~a~-~~ga~~v~~~ell~~~~DIliP~A~  240 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERV----------AHAV-ALGHTAVALEDVLSTPCDVFAPCAM  240 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTCEECCGGGGGGCCCSEEEECSC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccHH----------HHHH-hcCCEEeChHHhhcCccceecHhHH
Confidence            5789999999 89999999999999999999777665443          4444 5665322             11100


Q ss_pred             cccH-HHHHHHhCCCCccEEEeCCCchHH-HHHHHhhccCCeEEEEc
Q 018404          222 ENDL-DAALKRCFPEGIDIYFEHVGGKML-DAVLLNMRLHGRIAACG  266 (356)
Q Consensus       222 ~~~~-~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g  266 (356)
                      .+.+ .+.+..+   +.++|+++..+... ..+.+.|..+|.++.-+
T Consensus       241 ~~~I~~~~~~~l---k~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd  284 (355)
T 1c1d_A          241 GGVITTEVARTL---DCSVVAGAANNVIADEAASDILHARGILYAPD  284 (355)
T ss_dssp             SCCBCHHHHHHC---CCSEECCSCTTCBCSHHHHHHHHHTTCEECCH
T ss_pred             HhhcCHHHHhhC---CCCEEEECCCCCCCCHHHHHHHHhCCEEEECC
Confidence            0000 0112211   36777777766543 36677777777665443

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.31  E-value=0.0067  Score=54.77  Aligned_cols=40  Identities=30%  Similarity=0.328  Sum_probs=35.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      .++.+|||+||+|.+|..++..+...|++|++++++.++.
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   48 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL   48 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccH
Confidence            4567999999999999999998888899999999987664

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.31  E-value=0.014  Score=49.49  Aligned_cols=103  Identities=17%  Similarity=0.136  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC------CEEEEEeCCcchhccccchhHHHHHHHhhcC-----CC--EEEec
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMG------CYVVGSAGSREKVWLIPMQSQLVELLKNKFG-----FD--DAFNY  219 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g------~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~--~vv~~  219 (356)
                      .++++++||-.| +|. |..+..+++..+      .+|++++.+++..      +.+.+.+. ..+     ..  .++..
T Consensus        77 ~~~~~~~VLdiG-~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~------~~a~~~~~-~~~~~~~~~~~v~~~~~  147 (227)
T 2pbf_A           77 VLKPGSRAIDVG-SGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLV------NFSLENIK-RDKPELLKIDNFKIIHK  147 (227)
T ss_dssp             TSCTTCEEEEES-CTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHH------HHHHHHHH-HHCGGGGSSTTEEEEEC
T ss_pred             hCCCCCEEEEEC-CCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHH------HHHHHHHH-HcCccccccCCEEEEEC
Confidence            578899999999 544 889999999876      5999999998876      12222223 334     21  22222


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEc
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +-...+.+....  .+.+|+|+..... ..+..+.+.|+++|+++..-
T Consensus       148 d~~~~~~~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~  193 (227)
T 2pbf_A          148 NIYQVNEEEKKE--LGLFDAIHVGASASELPEILVDLLAENGKLIIPI  193 (227)
T ss_dssp             CGGGCCHHHHHH--HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred             ChHhcccccCcc--CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            111011000011  2369999987766 56688999999999988654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.30  E-value=0.02  Score=51.13  Aligned_cols=75  Identities=11%  Similarity=0.149  Sum_probs=48.4

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHh
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRC  232 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~  232 (356)
                      -.+..+|||+||+|.+|..+++.+...|++|++++++.+..          .     ++... ..|..+.+.+.+.+.. 
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~----------~-----l~~~~~~~Dl~d~~~~~~~~~~-   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAK----------L-----PNVEMISLDIMDSQRVKKVISD-   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCC----------C-----TTEEEEECCTTCHHHHHHHHHH-
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc----------c-----ceeeEEECCCCCHHHHHHHHHh-
Confidence            34567999999999999999999888999999999875542          1     12211 1233332123333332 


Q ss_pred             CCCCccEEEeCCCc
Q 018404          233 FPEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~~~~d~vid~~g~  246 (356)
                        +++|+||.+.|.
T Consensus        73 --~~~d~vih~A~~   84 (321)
T 2pk3_A           73 --IKPDYIFHLAAK   84 (321)
T ss_dssp             --HCCSEEEECCSC
T ss_pred             --cCCCEEEEcCcc
Confidence              258999999884

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.28  E-value=0.0046  Score=51.64  Aligned_cols=73  Identities=19%  Similarity=0.252  Sum_probs=48.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHHHhCCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~~~~~~~  236 (356)
                      +++|+||+|++|..+++.+...  +|++++++.++.          +.+.++++. ..  .|..+.+.+.+.+.+  .++
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~----------~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~   66 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGAL----------AELAREVGA-RALPADLADELEAKALLEE--AGP   66 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHH----------HHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCS
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHH----------HHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCC
Confidence            6899999999999888776665  999999987776          444423332 22  233333233344443  247


Q ss_pred             ccEEEeCCCc
Q 018404          237 IDIYFEHVGG  246 (356)
Q Consensus       237 ~d~vid~~g~  246 (356)
                      +|++|.+.|.
T Consensus        67 id~vi~~ag~   76 (207)
T 2yut_A           67 LDLLVHAVGK   76 (207)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999883

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.27  E-value=0.0034  Score=54.08  Aligned_cols=98  Identities=6%  Similarity=-0.095  Sum_probs=65.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhh---cCCCEEEecCCcccHHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNK---FGFDDAFNYKEENDLDAALK  230 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~~~  230 (356)
                      ..+|.+||-+| + |.|..+..+++..+.+|++++.+++.+          +.+++.   .+....+-.  . ++.+.+.
T Consensus        58 ~~~G~rVLdiG-~-G~G~~~~~~~~~~~~~v~~id~~~~~~----------~~a~~~~~~~~~~~~~~~--~-~a~~~~~  122 (236)
T 3orh_A           58 SSKGGRVLEVG-F-GMAIAASKVQEAPIDEHWIIECNDGVF----------QRLRDWAPRQTHKVIPLK--G-LWEDVAP  122 (236)
T ss_dssp             TTTCEEEEEEC-C-TTSHHHHHHTTSCEEEEEEEECCHHHH----------HHHHHHGGGCSSEEEEEE--S-CHHHHGG
T ss_pred             ccCCCeEEEEC-C-CccHHHHHHHHhCCcEEEEEeCCHHHH----------HHHHHHHhhCCCceEEEe--e-hHHhhcc
Confidence            46889999999 3 468888888887778999999998877          666622   222211211  1 3444444


Q ss_pred             HhCCCCccEE-EeCCCc-----------hHHHHHHHhhccCCeEEEEc
Q 018404          231 RCFPEGIDIY-FEHVGG-----------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       231 ~~~~~~~d~v-id~~g~-----------~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .+..+.||.| +|+...           ..+.++.+.|+|||+++.+.
T Consensus       123 ~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          123 TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             cccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            4444479887 554432           24577899999999998764

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.26  E-value=0.0082  Score=54.08  Aligned_cols=104  Identities=17%  Similarity=0.202  Sum_probs=66.8

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  227 (356)
                      ....++++++||-.| +|. |..+..+++..+  .+|++++.+++..      +.+.+.++ ..|... ++.... ++.+
T Consensus        69 ~~l~~~~~~~VLDiG-cG~-G~~~~~la~~~~~~~~v~gvD~s~~~~------~~a~~~~~-~~g~~~-v~~~~~-d~~~  137 (317)
T 1dl5_A           69 EWVGLDKGMRVLEIG-GGT-GYNAAVMSRVVGEKGLVVSVEYSRKIC------EIAKRNVE-RLGIEN-VIFVCG-DGYY  137 (317)
T ss_dssp             HHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESCHHHH------HHHHHHHH-HTTCCS-EEEEES-CGGG
T ss_pred             HhcCCCCcCEEEEec-CCc-hHHHHHHHHhcCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCC-eEEEEC-Chhh
Confidence            456788999999999 554 888888888764  5799999998876      22222233 345432 111111 2211


Q ss_pred             HHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEc
Q 018404          228 ALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .+.  ..+.+|+|+..... .....+.+.|+|+|+++..-
T Consensus       138 ~~~--~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          138 GVP--EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             CCG--GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             ccc--cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            111  12379999987665 33467889999999988653

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.26  E-value=0.01  Score=53.57  Aligned_cols=41  Identities=17%  Similarity=0.187  Sum_probs=33.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .-.++.+|||+||+|.+|..+++.+...|.+|++++++.+.
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   50 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSS   50 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            34678899999999999999999888899999999987654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=96.26  E-value=0.016  Score=51.65  Aligned_cols=36  Identities=22%  Similarity=0.258  Sum_probs=29.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   37 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA   37 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC
Confidence            468999999999999999988889999999987643

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.24  E-value=0.053  Score=48.62  Aligned_cols=100  Identities=14%  Similarity=0.162  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC---cchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGS---REKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~  230 (356)
                      .+.+++|+| +|++|.+++..+...|+ +|+++.|+   .++.      +++.+.+...++.. ..++..+.+.+.+.+.
T Consensus       147 ~gk~~lVlG-AGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a------~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~  219 (312)
T 3t4e_A          147 RGKTMVLLG-AGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKA------VAFAKRVNENTDCVVTVTDLADQHAFTEALA  219 (312)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHH------HHHHHHHHHHSSCEEEEEETTCHHHHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCCEEEEEECCCchHHHH------HHHHHHhhhccCcceEEechHhhhhhHhhcc
Confidence            578999999 69999999999999999 89999999   5554      22333333223332 2333332101123333


Q ss_pred             HhCCCCccEEEeCCCchHH--H-H----HHHhhccCCeEEEEcc
Q 018404          231 RCFPEGIDIYFEHVGGKML--D-A----VLLNMRLHGRIAACGM  267 (356)
Q Consensus       231 ~~~~~~~d~vid~~g~~~~--~-~----~~~~l~~~G~~v~~g~  267 (356)
                           .+|+||+|++....  . .    -...+.++..++.+-.
T Consensus       220 -----~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY  258 (312)
T 3t4e_A          220 -----SADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVY  258 (312)
T ss_dssp             -----HCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCC
T ss_pred             -----CceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEecc
Confidence                 38999999875321  0 0    1234555555555543

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.22  E-value=0.0075  Score=54.45  Aligned_cols=78  Identities=9%  Similarity=0.023  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc-CCCE-EEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFDD-AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~-vv~~~~~~~~~~~~~~~~  233 (356)
                      .+.+|||+||+|.+|..+++.+...|++|++++++....          ..+.+.+ +... ..|..+.+.+.+.+.+. 
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~-   87 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK----------REVLPPVAGLSVIEGSVTDAGLLERAFDSF-   87 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSC----------GGGSCSCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccc----------hhhhhccCCceEEEeeCCCHHHHHHHHhhc-
Confidence            356899999999999999998888899999999865543          1111022 1111 12333321333444433 


Q ss_pred             CCCccEEEeCCCc
Q 018404          234 PEGIDIYFEHVGG  246 (356)
Q Consensus       234 ~~~~d~vid~~g~  246 (356)
                        ++|+||.+.|.
T Consensus        88 --~~D~vih~A~~   98 (330)
T 2pzm_A           88 --KPTHVVHSAAA   98 (330)
T ss_dssp             --CCSEEEECCCC
T ss_pred             --CCCEEEECCcc
Confidence              59999999884

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.21  E-value=0.0093  Score=48.81  Aligned_cols=101  Identities=15%  Similarity=0.158  Sum_probs=65.8

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAAL  229 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~  229 (356)
                      ..++++++||=.| +| .|..+..+++. +.+|++++.+++..      +.+.+.++ +.+..  .++. .+   . ..+
T Consensus        18 ~~~~~~~~vLDiG-cG-~G~~~~~la~~-~~~v~~vD~s~~~l------~~a~~~~~-~~~~~~v~~~~-~~---~-~~l   82 (185)
T 3mti_A           18 EVLDDESIVVDAT-MG-NGNDTAFLAGL-SKKVYAFDVQEQAL------GKTSQRLS-DLGIENTELIL-DG---H-ENL   82 (185)
T ss_dssp             TTCCTTCEEEESC-CT-TSHHHHHHHTT-SSEEEEEESCHHHH------HHHHHHHH-HHTCCCEEEEE-SC---G-GGG
T ss_pred             HhCCCCCEEEEEc-CC-CCHHHHHHHHh-CCEEEEEECCHHHH------HHHHHHHH-HcCCCcEEEEe-Cc---H-HHH
Confidence            4678899999988 44 48888888888 89999999998876      22223333 34542  2222 11   1 122


Q ss_pred             HHhCCCCccEEEeCCCc----------------hHHHHHHHhhccCCeEEEEcc
Q 018404          230 KRCFPEGIDIYFEHVGG----------------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .....+.+|+|+-..+.                ..+..+.+.|+|+|+++.+..
T Consensus        83 ~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           83 DHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             GGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             HhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            22333479999865321                245788899999999987754

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.19  E-value=0.02  Score=51.08  Aligned_cols=93  Identities=16%  Similarity=0.041  Sum_probs=63.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~  232 (356)
                      ++.+|+|+| +|++|.+++..+...|+ +|++..++.++.          +.+.++++..  .+++      +. .+.+.
T Consensus       140 ~~~~vlVlG-aGg~g~aia~~L~~~G~~~V~v~nR~~~ka----------~~la~~~~~~~~~~~~------~~-~~~~~  201 (297)
T 2egg_A          140 DGKRILVIG-AGGGARGIYFSLLSTAAERIDMANRTVEKA----------ERLVREGDERRSAYFS------LA-EAETR  201 (297)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECSSHHHH----------HHHHHHSCSSSCCEEC------HH-HHHHT
T ss_pred             CCCEEEEEC-cHHHHHHHHHHHHHCCCCEEEEEeCCHHHH----------HHHHHHhhhccCceee------HH-HHHhh
Confidence            578999999 69999999999999998 999999998886          5555466542  2221      21 22222


Q ss_pred             CCCCccEEEeCCCchHHH------HHHHhhccCCeEEEEcc
Q 018404          233 FPEGIDIYFEHVGGKMLD------AVLLNMRLHGRIAACGM  267 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~~~------~~~~~l~~~G~~v~~g~  267 (356)
                      . +++|+||+|++.....      .....++++..++.+..
T Consensus       202 ~-~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          202 L-AEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             G-GGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             h-ccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            1 2589999999864321      11235667777777765

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.16  E-value=0.023  Score=53.09  Aligned_cols=93  Identities=13%  Similarity=0.095  Sum_probs=63.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC---CEEEEEeCCcchhccccchhHHHHHHHhhcC------CC-EEEecCCcccHHHH
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMG---CYVVGSAGSREKVWLIPMQSQLVELLKNKFG------FD-DAFNYKEENDLDAA  228 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g---~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g------~~-~vv~~~~~~~~~~~  228 (356)
                      +|+|+|+ |++|..+++.+...|   .+|++.+++.++.          +.+.++++      .. ..+|..+.+++.+.
T Consensus         3 kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~----------~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~   71 (405)
T 4ina_A            3 KVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKC----------QEIAQSIKAKGYGEIDITTVDADSIEELVAL   71 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHH----------HHHHHHHHHTTCCCCEEEECCTTCHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHH----------HHHHHHhhhhcCCceEEEEecCCCHHHHHHH
Confidence            7999996 999999999888887   4999999998886          43332332      21 12343332234444


Q ss_pred             HHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          229 LKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      +.+.   ++|+||+|+|. .....+..++..+-+++.+
T Consensus        72 l~~~---~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           72 INEV---KPQIVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             HHHH---CCSEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             HHhh---CCCEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            4433   58999999997 4555666777777787765

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.16  E-value=0.019  Score=54.56  Aligned_cols=95  Identities=15%  Similarity=0.159  Sum_probs=62.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~  233 (356)
                      ++.+|+|+|+ |++|.+++..+... +.+|++++++.++.          +.+.+..+... .+|..+.+++.+.+.   
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka----------~~la~~~~~~~~~~D~~d~~~l~~~l~---   87 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANA----------QALAKPSGSKAISLDVTDDSALDKVLA---   87 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHH----------HHHHGGGTCEEEECCTTCHHHHHHHHH---
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHH----------HHHHHhcCCcEEEEecCCHHHHHHHHc---
Confidence            3568999995 99999999888877 67999999998876          55552334322 233333212333332   


Q ss_pred             CCCccEEEeCCCch-HHHHHHHhhccCCeEEEEc
Q 018404          234 PEGIDIYFEHVGGK-MLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       234 ~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g  266 (356)
                        ++|+||+|++.. .......++.++-.++...
T Consensus        88 --~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~  119 (467)
T 2axq_A           88 --DNDVVISLIPYTFHPNVVKSAIRTKTDVVTSS  119 (467)
T ss_dssp             --TSSEEEECSCGGGHHHHHHHHHHHTCEEEECS
T ss_pred             --CCCEEEECCchhhhHHHHHHHHhcCCEEEEee
Confidence              589999999974 3333455677777776653

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.15  E-value=0.0026  Score=57.10  Aligned_cols=96  Identities=13%  Similarity=0.075  Sum_probs=62.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEE---e-cCCcccHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAF---N-YKEENDLDAAL  229 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv---~-~~~~~~~~~~~  229 (356)
                      -.|.+|+|.|++.-+|..+++++...|++|++..++..+.+         +... .++.. +..   . .+.. ++.+.+
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~---------~ra~-~la~~~~~~t~~~~t~~~-~L~e~l  243 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF---------TRGE-SLKLNKHHVEDLGEYSED-LLKKCS  243 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE---------ESCC-CSSCCCCEEEEEEECCHH-HHHHHH
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHH---------hHHH-HHhhhcccccccccccHh-HHHHHh
Confidence            36889999996557899999999999999998888755431         1111 23221 111   0 1112 555566


Q ss_pred             HHhCCCCccEEEeCCCchH--HHHHHHhhccCCeEEEEccc
Q 018404          230 KRCFPEGIDIYFEHVGGKM--LDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~  268 (356)
                      ++     +|+||.++|...  +..  ..++++-.++.+|..
T Consensus       244 ~~-----ADIVIsAtg~p~~vI~~--e~vk~GavVIDVgi~  277 (320)
T 1edz_A          244 LD-----SDVVITGVPSENYKFPT--EYIKEGAVCINFACT  277 (320)
T ss_dssp             HH-----CSEEEECCCCTTCCBCT--TTSCTTEEEEECSSS
T ss_pred             cc-----CCEEEECCCCCcceeCH--HHcCCCeEEEEcCCC
Confidence            65     899999999843  332  236888788888863

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.15  E-value=0.018  Score=52.33  Aligned_cols=87  Identities=18%  Similarity=0.248  Sum_probs=63.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++.+.           +.+. ++|+..    .   ++.+.+.     
T Consensus       164 ~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-----------~~~~-~~g~~~----~---~l~ell~-----  218 (335)
T 2g76_A          164 NGKTLGILG-LGRIGREVATRMQSFGMKTIGYDPIISP-----------EVSA-SFGVQQ----L---PLEEIWP-----  218 (335)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSCH-----------HHHH-HTTCEE----C---CHHHHGG-----
T ss_pred             CcCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcch-----------hhhh-hcCcee----C---CHHHHHh-----
Confidence            578999999 8999999999999999999999987654           3344 666532    1   3333333     


Q ss_pred             CccEEEeCCCch-----HH-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGGK-----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~~-----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                      ..|+|+.++...     .+ ...+..|++++.++.++.
T Consensus       219 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          219 LCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             GCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             cCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            378888887652     12 456778888888888876

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.12  E-value=0.079  Score=41.87  Aligned_cols=95  Identities=9%  Similarity=0.029  Sum_probs=60.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-chhccccchhHHHHHHHhhc--CCCEEEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-EKVWLIPMQSQLVELLKNKF--GFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~--g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      ..+|+|.| .|.+|...++.+...|.+|+++++++ ++.          +.+.+.+  |.. ++..+.. + .+.+.+..
T Consensus         3 ~~~vlI~G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~----------~~~~~~~~~~~~-~i~gd~~-~-~~~l~~a~   68 (153)
T 1id1_A            3 KDHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDI----------KQLEQRLGDNAD-VIPGDSN-D-SSVLKKAG   68 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHH----------HHHHHHHCTTCE-EEESCTT-S-HHHHHHHT
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCChHHH----------HHHHHhhcCCCe-EEEcCCC-C-HHHHHHcC
Confidence            46799999 69999999999999999999999874 544          4444222  433 3322221 1 23444432


Q ss_pred             CCCccEEEeCCCchHHH----HHHHhhccCCeEEEE
Q 018404          234 PEGIDIYFEHVGGKMLD----AVLLNMRLHGRIAAC  265 (356)
Q Consensus       234 ~~~~d~vid~~g~~~~~----~~~~~l~~~G~~v~~  265 (356)
                      -.++|.|+-+++.+..+    ...+.+.+..+++..
T Consensus        69 i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           69 IDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             TTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             hhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            23799999999985333    334455556677654

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.11  E-value=0.0062  Score=51.85  Aligned_cols=95  Identities=17%  Similarity=0.092  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC-------CEEEEEeCCcchhccccchhHHHHHHHh---hcC-----C--CE
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMG-------CYVVGSAGSREKVWLIPMQSQLVELLKN---KFG-----F--DD  215 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g-------~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g-----~--~~  215 (356)
                      .++++++||-.| +|. |..+..+++..+       .+|++++.+++..          +.+++   +.+     .  -.
T Consensus        81 ~~~~~~~VLdiG-~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~----------~~a~~~~~~~~~~~~~~~~v~  148 (227)
T 1r18_A           81 HLKPGARILDVG-SGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELV----------RRSKANLNTDDRSMLDSGQLL  148 (227)
T ss_dssp             TCCTTCEEEEES-CTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHH----------HHHHHHHHHHHHHHHHHTSEE
T ss_pred             hCCCCCEEEEEC-CCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHH----------HHHHHHHHhcCccccCCCceE
Confidence            578899999999 554 888889998776       4999999998876          44431   222     1  12


Q ss_pred             EEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          216 AFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       216 vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      ++..    +..+.+..  .+.+|+|+.+... .....+.+.|+++|+++..
T Consensus       149 ~~~~----d~~~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~  193 (227)
T 1r18_A          149 IVEG----DGRKGYPP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  193 (227)
T ss_dssp             EEES----CGGGCCGG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             EEEC----CcccCCCc--CCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence            2221    11111111  1379999987776 5668899999999998854

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.11  E-value=0.084  Score=45.53  Aligned_cols=77  Identities=14%  Similarity=0.142  Sum_probs=57.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|.|.|++|.+|...++.+... +.+++++....+.+          +.+. ..+++.++|+...+...+.+......+.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl----------~~~~-~~~~DvvIDfT~p~a~~~~~~~a~~~g~   70 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPL----------SLLT-DGNTEVVIDFTHPDVVMGNLEFLIDNGI   70 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCT----------HHHH-HTTCCEEEECSCTTTHHHHHHHHHHTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCH----------HHHh-ccCCcEEEEccChHHHHHHHHHHHHcCC
Confidence            5899998899999999988876 88988777665555          5554 4467888988875344444544433479


Q ss_pred             cEEEeCCCc
Q 018404          238 DIYFEHVGG  246 (356)
Q Consensus       238 d~vid~~g~  246 (356)
                      ++|+-++|.
T Consensus        71 ~~VigTTG~   79 (245)
T 1p9l_A           71 HAVVGTTGF   79 (245)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEcCCCC
Confidence            999999886

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.09  E-value=0.013  Score=50.96  Aligned_cols=34  Identities=12%  Similarity=0.132  Sum_probs=29.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSR  191 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~  191 (356)
                      +.+|+|.| .|++|..+++.+...|. +++.+++..
T Consensus        31 ~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            46899999 89999999999999998 888888765

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.07  E-value=0.054  Score=45.32  Aligned_cols=89  Identities=11%  Similarity=0.063  Sum_probs=59.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC-----CCEEEecCCcccHHHHHHHhC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG-----FDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      +|+|+||+|.+|...+..+...|.+|++.++++++.          +.+.+.++     .+  +..  . ++.+.+.+  
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~--~~~--~-~~~~~~~~--   64 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKA----------EAKAAEYRRIAGDAS--ITG--M-KNEDAAEA--   64 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH----------HHHHHHHHHHHSSCC--EEE--E-EHHHHHHH--
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHhccccccCC--CCh--h-hHHHHHhc--
Confidence            588999899999999888888899999999988776          54442333     11  111  1 44444543  


Q ss_pred             CCCccEEEeCCCchHHHHHHHhhc---cCCeEEEEcc
Q 018404          234 PEGIDIYFEHVGGKMLDAVLLNMR---LHGRIAACGM  267 (356)
Q Consensus       234 ~~~~d~vid~~g~~~~~~~~~~l~---~~G~~v~~g~  267 (356)
                         +|+||.|+........++.+.   ++..++.+..
T Consensus        65 ---~D~Vi~~~~~~~~~~~~~~l~~~~~~~~vi~~~~   98 (212)
T 1jay_A           65 ---CDIAVLTIPWEHAIDTARDLKNILREKIVVSPLV   98 (212)
T ss_dssp             ---CSEEEECSCHHHHHHHHHHTHHHHTTSEEEECCC
T ss_pred             ---CCEEEEeCChhhHHHHHHHHHHHcCCCEEEEcCC
Confidence               799999999765555444332   3445555543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.07  E-value=0.018  Score=50.57  Aligned_cols=94  Identities=16%  Similarity=0.065  Sum_probs=63.2

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +||+..-++..|.+..---.|.+++|.|.++.+|..+++++..+|++|++..+....                       
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~-----------------------  197 (286)
T 4a5o_A          141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRD-----------------------  197 (286)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSC-----------------------
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcC-----------------------
Confidence            344444444455443333479999999977779999999999999998877543222                       


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCch-HHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~  268 (356)
                              +.+.++     .+|+||.++|.. .+.  -..++++..++.+|..
T Consensus       198 --------L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~  235 (286)
T 4a5o_A          198 --------LADHVS-----RADLVVVAAGKPGLVK--GEWIKEGAIVIDVGIN  235 (286)
T ss_dssp             --------HHHHHH-----TCSEEEECCCCTTCBC--GGGSCTTCEEEECCSC
T ss_pred             --------HHHHhc-----cCCEEEECCCCCCCCC--HHHcCCCeEEEEeccc
Confidence                    222222     268888888874 322  2457888888999874

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.06  E-value=0.017  Score=48.29  Aligned_cols=97  Identities=19%  Similarity=0.123  Sum_probs=66.7

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~  227 (356)
                      ....+.++.+||-.| +| .|..+..+++. |++|++++.+++.+          +.++ +.+...  ++..    ++.+
T Consensus        40 ~l~~~~~~~~vLdiG-~G-~G~~~~~l~~~-~~~v~~~D~s~~~~----------~~a~-~~~~~~~~~~~~----d~~~  101 (218)
T 3ou2_A           40 RLRAGNIRGDVLELA-SG-TGYWTRHLSGL-ADRVTALDGSAEMI----------AEAG-RHGLDNVEFRQQ----DLFD  101 (218)
T ss_dssp             HHTTTTSCSEEEEES-CT-TSHHHHHHHHH-SSEEEEEESCHHHH----------HHHG-GGCCTTEEEEEC----CTTS
T ss_pred             HHhcCCCCCeEEEEC-CC-CCHHHHHHHhc-CCeEEEEeCCHHHH----------HHHH-hcCCCCeEEEec----cccc
Confidence            334578888999998 33 47788888887 88999999998887          7777 555321  2221    2111


Q ss_pred             HHHHhCCCCccEEEeCCC---------chHHHHHHHhhccCCeEEEEcc
Q 018404          228 ALKRCFPEGIDIYFEHVG---------GKMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~g~  267 (356)
                       +  ...+.+|+|+....         ...+..+.+.|+|+|+++....
T Consensus       102 -~--~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          102 -W--TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             -C--CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             -C--CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence             1  12238999996443         1356788899999999987754

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.03  E-value=0.019  Score=51.95  Aligned_cols=39  Identities=23%  Similarity=0.240  Sum_probs=32.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .++.+|||+||+|.+|..+++.+...|++|++++++.+.
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~   55 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG   55 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence            346789999999999999999999999999999987543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.03  E-value=0.021  Score=50.62  Aligned_cols=97  Identities=14%  Similarity=0.037  Sum_probs=60.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFP  234 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~  234 (356)
                      ..+|+|+||+|.+|..+++.+...| .+|++++++.++.       + .+.+. ..+...+ .|..+.    +.+.+...
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~-------~-~~~l~-~~~~~~~~~D~~d~----~~l~~~~~   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK-------A-AKELR-LQGAEVVQGDQDDQ----VIMELALN   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH-------H-HHHHH-HTTCEEEECCTTCH----HHHHHHHT
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH-------H-HHHHH-HCCCEEEEecCCCH----HHHHHHHh
Confidence            4689999999999999998888888 8999999987653       0 02333 3455322 233332    22333222


Q ss_pred             CCccEEEeCCCch----------HHHHHHHhhccC--CeEEEEcc
Q 018404          235 EGIDIYFEHVGGK----------MLDAVLLNMRLH--GRIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g~~----------~~~~~~~~l~~~--G~~v~~g~  267 (356)
                       ++|.||.+.|..          .....++.++..  +++|..+.
T Consensus        72 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           72 -GAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             -TCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             -cCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence             589999998741          123344444332  57887554

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.02  E-value=0.012  Score=52.41  Aligned_cols=94  Identities=12%  Similarity=0.123  Sum_probs=58.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-------chhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-------EKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAA  228 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~  228 (356)
                      +.+|+|+||+|.+|...++.+...|.+|++++++.       ++.      +.+ +.+. ..++..+ .|..+.    +.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~------~~~-~~l~-~~~v~~v~~D~~d~----~~   69 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKE------ELI-DNYQ-SLGVILLEGDINDH----ET   69 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHH------HHH-HHHH-HTTCEEEECCTTCH----HH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHH------HHH-HHHH-hCCCEEEEeCCCCH----HH
Confidence            35799999999999999988888899999999886       332      001 1223 3455322 244332    22


Q ss_pred             HHHhCCCCccEEEeCCCc---hHHHHHHHhhccC---CeEE
Q 018404          229 LKRCFPEGIDIYFEHVGG---KMLDAVLLNMRLH---GRIA  263 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~---G~~v  263 (356)
                      +.+... ++|+||.+.|.   ......++.++..   ++++
T Consensus        70 l~~~~~-~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           70 LVKAIK-QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             HHHHHT-TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             HHHHHh-CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            333322 59999999985   2333444444433   4666

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=96.01  E-value=0.028  Score=47.98  Aligned_cols=77  Identities=12%  Similarity=0.130  Sum_probs=52.4

Q ss_pred             CCCEEEEecC----------------CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          156 KGEYIYVSAA----------------SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       156 ~g~~VlI~ga----------------~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      .|.+|||+||                +|.+|.+.++.+...|++|+.+.+..+..          . .. ..+. .+++.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~----------~-~~-~~~~-~~~~v   68 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK----------P-EP-HPNL-SIREI   68 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC----------C-CC-CTTE-EEEEC
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------c-cC-CCCe-EEEEH
Confidence            5789999999                78899999999999999999999875421          0 00 0122 34444


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCc
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~  246 (356)
                      ....++.+.+.+.. +++|++|.+.+-
T Consensus        69 ~s~~em~~~v~~~~-~~~Dili~aAAv   94 (232)
T 2gk4_A           69 TNTKDLLIEMQERV-QDYQVLIHSMAV   94 (232)
T ss_dssp             CSHHHHHHHHHHHG-GGCSEEEECSBC
T ss_pred             hHHHHHHHHHHHhc-CCCCEEEEcCcc
Confidence            43224445555543 368999998884

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.00  E-value=0.027  Score=47.94  Aligned_cols=75  Identities=17%  Similarity=0.177  Sum_probs=51.2

Q ss_pred             CCCEEEEecC----------------CchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          156 KGEYIYVSAA----------------SGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       156 ~g~~VlI~ga----------------~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      .|.+|||+||                +|++|.+.++.+...|++|+.+.++. .+          +.   ..|. .+++.
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~-~l----------~~---~~g~-~~~dv   71 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV-SL----------PT---PPFV-KRVDV   71 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC-CC----------CC---CTTE-EEEEC
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc-cc----------cc---CCCC-eEEcc
Confidence            4789999999                59999999999999999999987654 22          10   1122 34454


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCc
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~  246 (356)
                      ....++.+.+.+.. +++|+++.+.|-
T Consensus        72 ~~~~~~~~~v~~~~-~~~Dili~~Aav   97 (226)
T 1u7z_A           72 MTALEMEAAVNASV-QQQNIFIGCAAV   97 (226)
T ss_dssp             CSHHHHHHHHHHHG-GGCSEEEECCBC
T ss_pred             CcHHHHHHHHHHhc-CCCCEEEECCcc
Confidence            44223444444433 358999998885

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.97  E-value=0.036  Score=49.36  Aligned_cols=92  Identities=14%  Similarity=0.068  Sum_probs=60.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      .+|||+||+|.+|..+++.+...|.+|++++++....          + +.   +.. ++.. +- . .+.+.+... ++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~-~~---~~~-~~~~-Dl-~-~~~~~~~~~-~~   63 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK----------A-IN---DYE-YRVS-DY-T-LEDLINQLN-DV   63 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCE-EEEC-CC-C-HHHHHHHTT-TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc----------c-CC---ceE-EEEc-cc-c-HHHHHHhhc-CC
Confidence            5899999999999999999999999999999985543          3 32   332 2221 21 3 445555544 69


Q ss_pred             cEEEeCCCch--------------HHHHHHHhhccC--CeEEEEccc
Q 018404          238 DIYFEHVGGK--------------MLDAVLLNMRLH--GRIAACGMI  268 (356)
Q Consensus       238 d~vid~~g~~--------------~~~~~~~~l~~~--G~~v~~g~~  268 (356)
                      |+||.+.+..              .....++.++..  .++|.+++.
T Consensus        64 d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~  110 (311)
T 3m2p_A           64 DAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTI  110 (311)
T ss_dssp             SEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred             CEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            9999998741              123444444443  468877753

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.97  E-value=0.011  Score=52.90  Aligned_cols=99  Identities=9%  Similarity=0.016  Sum_probs=66.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALK  230 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~  230 (356)
                      +.++++||-.| + |.|..+..+++..+++|++++.+++..      +.+.+.++ ..|..   .++..+-. +    + 
T Consensus       115 ~~~~~~vLDiG-c-G~G~~~~~la~~~~~~v~gvD~s~~~~------~~a~~~~~-~~~~~~~v~~~~~d~~-~----~-  179 (312)
T 3vc1_A          115 AGPDDTLVDAG-C-GRGGSMVMAHRRFGSRVEGVTLSAAQA------DFGNRRAR-ELRIDDHVRSRVCNML-D----T-  179 (312)
T ss_dssp             CCTTCEEEEES-C-TTSHHHHHHHHHHCCEEEEEESCHHHH------HHHHHHHH-HTTCTTTEEEEECCTT-S----C-
T ss_pred             CCCCCEEEEec-C-CCCHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHH-HcCCCCceEEEECChh-c----C-
Confidence            78899999998 3 458888899998899999999998876      22222333 34542   12211111 1    0 


Q ss_pred             HhCCCCccEEEeCCC-----c-hHHHHHHHhhccCCeEEEEcc
Q 018404          231 RCFPEGIDIYFEHVG-----G-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       231 ~~~~~~~d~vid~~g-----~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+..+.+|+|+....     - ..+..+.+.|+|+|+++.+..
T Consensus       180 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          180 PFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            012247999986322     2 578899999999999997764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.97  E-value=0.023  Score=50.81  Aligned_cols=93  Identities=13%  Similarity=0.112  Sum_probs=58.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc-hhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE-KVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~  235 (356)
                      .+|+|+||+|.+|...++.+...|.+|++++++.+ +.       +..+.+. ..++..+ .|..+.    +.+.+... 
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-------~~~~~l~-~~~v~~v~~Dl~d~----~~l~~a~~-   78 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKT-------TLLDEFQ-SLGAIIVKGELDEH----EKLVELMK-   78 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCH-------HHHHHHH-HTTCEEEECCTTCH----HHHHHHHT-
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchh-------hHHHHhh-cCCCEEEEecCCCH----HHHHHHHc-
Confidence            47999999999999999998889999999998865 32       0001223 3455322 244332    22333322 


Q ss_pred             CccEEEeCCCch---HHHHHHHhhccC---CeEE
Q 018404          236 GIDIYFEHVGGK---MLDAVLLNMRLH---GRIA  263 (356)
Q Consensus       236 ~~d~vid~~g~~---~~~~~~~~l~~~---G~~v  263 (356)
                      ++|+||.+.+..   .....++.++..   +++|
T Consensus        79 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           79 KVDVVISALAFPQILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             TCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred             CCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEE
Confidence            599999998852   234444444433   4676

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.96  E-value=0.018  Score=51.65  Aligned_cols=98  Identities=14%  Similarity=0.131  Sum_probs=57.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-chhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-EKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~  235 (356)
                      .+|+|+||+|.+|...++.+...|.+|++++++. +..  .|+..+....+. ..++..+ .|..+.    +.+.+... 
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~~~~~l~~~~-~~~v~~v~~D~~d~----~~l~~a~~-   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDS--TPSSVQLREEFR-SMGVTIIEGEMEEH----EKMVSVLK-   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTC--CHHHHHHHHHHH-HTTCEEEECCTTCH----HHHHHHHT-
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCccccc--ChHHHHHHHHhh-cCCcEEEEecCCCH----HHHHHHHc-
Confidence            4799999999999999998888999999999886 210  000000001122 3354322 244332    23333322 


Q ss_pred             CccEEEeCCCch---HHHHHHHhhccC---CeEE
Q 018404          236 GIDIYFEHVGGK---MLDAVLLNMRLH---GRIA  263 (356)
Q Consensus       236 ~~d~vid~~g~~---~~~~~~~~l~~~---G~~v  263 (356)
                      ++|+||.+.|..   ....+++.+...   +++|
T Consensus        77 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           77 QVDIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            499999998852   234445544443   4776

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=95.94  E-value=0.0098  Score=51.37  Aligned_cols=108  Identities=8%  Similarity=0.024  Sum_probs=67.7

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  227 (356)
                      ......++.+||=+|  .|.|..++.+++.+  +.+|++++.+++..      +.+.+.++ ..|...-+..... +..+
T Consensus        54 ~l~~~~~~~~VLDiG--~G~G~~t~~la~~~~~~~~v~~iD~~~~~~------~~a~~~~~-~~g~~~~i~~~~g-da~~  123 (242)
T 3r3h_A           54 MLIRLTRAKKVLELG--TFTGYSALAMSLALPDDGQVITCDINEGWT------KHAHPYWR-EAKQEHKIKLRLG-PALD  123 (242)
T ss_dssp             HHHHHHTCSEEEEEE--SCCSHHHHHHHHTSCTTCEEEEEECCCSSC------CCSHHHHH-HTTCTTTEEEEES-CHHH
T ss_pred             HHHhhcCcCEEEEee--CCcCHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCcEEEEEc-CHHH
Confidence            334455678999988  45677888888876  57999999988765      12224444 5565311222111 3333


Q ss_pred             HHHHhC----CCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          228 ALKRCF----PEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       228 ~~~~~~----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+....    .+.+|+||-....    ..+..+.+.|+|+|.++.-..
T Consensus       124 ~l~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~  171 (242)
T 3r3h_A          124 TLHSLLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNI  171 (242)
T ss_dssp             HHHHHHHHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred             HHHHHhhccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECC
Confidence            333321    2479998864433    257788999999999987543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.94  E-value=0.037  Score=48.49  Aligned_cols=103  Identities=15%  Similarity=0.113  Sum_probs=69.3

Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      .+.|-+.++....+-..+.+++|+| +|++|.+++..+...|.+|++..|+.++.          +.+. +++.. ...+
T Consensus       101 G~NTD~~Gf~~~L~~~~~k~vlvlG-aGGaaraia~~L~~~G~~v~V~nRt~~ka----------~~la-~~~~~-~~~~  167 (269)
T 3phh_A          101 GYNTDALGFYLSLKQKNYQNALILG-AGGSAKALACELKKQGLQVSVLNRSSRGL----------DFFQ-RLGCD-CFME  167 (269)
T ss_dssp             EECCHHHHHHHHCC---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTTH----------HHHH-HHTCE-EESS
T ss_pred             EecChHHHHHHHHHHcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHH-HCCCe-EecH
Confidence            3445555554332212288999999 79999999999999999999999999987          7776 77742 3333


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCch-----HH--HHHHHhhccCCeEEEEcc
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGGK-----ML--DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~~-----~~--~~~~~~l~~~G~~v~~g~  267 (356)
                      .+   +    .     .+|+||+|+...     .+  ......++++..++.+-+
T Consensus       168 ~~---l----~-----~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY  210 (269)
T 3phh_A          168 PP---K----S-----AFDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAY  210 (269)
T ss_dssp             CC---S----S-----CCSEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred             HH---h----c-----cCCEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCC
Confidence            22   1    1     589999987742     12  122236778888777754

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=95.94  E-value=0.011  Score=51.75  Aligned_cols=94  Identities=15%  Similarity=0.058  Sum_probs=60.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      +.+|||+||+|++|.++++.+...|++|+++++++.+.          .    ..+.. ...|..+.    +.+.+... 
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~----------~----~~~~~~~~~Dl~d~----~~~~~~~~-   63 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP----------A----GPNEECVQCDLADA----NAVNAMVA-   63 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC----------C----CTTEEEEECCTTCH----HHHHHHHT-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc----------c----CCCCEEEEcCCCCH----HHHHHHHc-
Confidence            46899999999999999999888999999999987764          2    11111 12233332    12333222 


Q ss_pred             CccEEEeCCCc---hHH-----------HHHHHhhcc--CCeEEEEcccc
Q 018404          236 GIDIYFEHVGG---KML-----------DAVLLNMRL--HGRIAACGMIS  269 (356)
Q Consensus       236 ~~d~vid~~g~---~~~-----------~~~~~~l~~--~G~~v~~g~~~  269 (356)
                      ++|+||.+.|.   ..+           ..+++.+.+  .+++|.+++..
T Consensus        64 ~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~  113 (267)
T 3rft_A           64 GCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH  113 (267)
T ss_dssp             TCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGG
T ss_pred             CCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchH
Confidence            58999999874   111           122333333  36899887644

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.94  E-value=0.018  Score=51.32  Aligned_cols=96  Identities=10%  Similarity=0.128  Sum_probs=57.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHH--hhcCCCEE-EecCCcccHHHHHHHhCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLK--NKFGFDDA-FNYKEENDLDAALKRCFP  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~v-v~~~~~~~~~~~~~~~~~  234 (356)
                      .+|+|+||+|.+|..+++.+...|.+|++++++....  .|+..   +.++  ...+...+ .|..+.    +.+.+...
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~---~~~~~~~~~~~~~~~~D~~d~----~~l~~~~~   75 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVS--NIDKV---QMLLYFKQLGAKLIEASLDDH----QRLVDALK   75 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSS--CHHHH---HHHHHHHTTTCEEECCCSSCH----HHHHHHHT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCccc--chhHH---HHHHHHHhCCeEEEeCCCCCH----HHHHHHHh
Confidence            5799999999999999998888899999999874320  00000   2222  02344221 233332    22333322


Q ss_pred             CCccEEEeCCCch-------HHHHHHHhhccCC---eEE
Q 018404          235 EGIDIYFEHVGGK-------MLDAVLLNMRLHG---RIA  263 (356)
Q Consensus       235 ~~~d~vid~~g~~-------~~~~~~~~l~~~G---~~v  263 (356)
                       ++|+||.+.|..       .....++.++..|   ++|
T Consensus        76 -~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           76 -QVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             -TCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             -CCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence             599999998742       2344555554444   776

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.94  E-value=0.021  Score=49.94  Aligned_cols=92  Identities=11%  Similarity=0.034  Sum_probs=62.8

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +||+..-++..|.+..  -.|.+++|.|+++-+|..+++++..+|++|++..+...                        
T Consensus       132 ~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~------------------------  185 (276)
T 3ngx_A          132 VPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTK------------------------  185 (276)
T ss_dssp             CCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS------------------------
T ss_pred             CCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcc------------------------
Confidence            3444445555565544  67999999997778999999999999999987764322                        


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCch-HHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~  268 (356)
                             ++.+.+++     +|+||.++|.. .+..  ..++++..++.+|..
T Consensus       186 -------~L~~~~~~-----ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~  224 (276)
T 3ngx_A          186 -------DIGSMTRS-----SKIVVVAVGRPGFLNR--EMVTPGSVVIDVGIN  224 (276)
T ss_dssp             -------CHHHHHHH-----SSEEEECSSCTTCBCG--GGCCTTCEEEECCCE
T ss_pred             -------cHHHhhcc-----CCEEEECCCCCccccH--hhccCCcEEEEeccC
Confidence                   22223332     67888888863 2222  346888888888863

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.93  E-value=0.062  Score=50.24  Aligned_cols=95  Identities=18%  Similarity=0.241  Sum_probs=69.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      +.+|+|.| .|-+|..+++.++..|..|++++.++++.          +.++ +.|...+. .+.  .-.+.+++..-..
T Consensus         4 ~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v----------~~~~-~~g~~vi~-GDa--t~~~~L~~agi~~   68 (413)
T 3l9w_A            4 GMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDPDHI----------ETLR-KFGMKVFY-GDA--TRMDLLESAGAAK   68 (413)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCHHHH----------HHHH-HTTCCCEE-SCT--TCHHHHHHTTTTT
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHH----------HHHH-hCCCeEEE-cCC--CCHHHHHhcCCCc
Confidence            46799999 79999999999999999999999999998          8888 88875332 221  1123454442237


Q ss_pred             ccEEEeCCCchH----HHHHHHhhccCCeEEEEc
Q 018404          237 IDIYFEHVGGKM----LDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       237 ~d~vid~~g~~~----~~~~~~~l~~~G~~v~~g  266 (356)
                      +|+|+-+++.+.    +....+.+.+..+++.-.
T Consensus        69 A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiara  102 (413)
T 3l9w_A           69 AEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARA  102 (413)
T ss_dssp             CSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             cCEEEECCCChHHHHHHHHHHHHhCCCCeEEEEE
Confidence            999999999842    234556667777777554

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.91  E-value=0.026  Score=50.00  Aligned_cols=96  Identities=13%  Similarity=0.054  Sum_probs=63.9

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +||+..-+...|.+..---.|.+++|.|+++.+|..+++++...|++|++..+....+          + +         
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l----------~-l---------  204 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTE----------D-M---------  204 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHH----------H-H---------
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCc----------h-h---------
Confidence            3444444555555544345789999999777799999999999999988776532222          1 0         


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCch-HHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~  268 (356)
                               .+.++     .+|+||.++|.. .+..  ..++++..++.+|..
T Consensus       205 ---------~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~  241 (300)
T 4a26_A          205 ---------IDYLR-----TADIVIAAMGQPGYVKG--EWIKEGAAVVDVGTT  241 (300)
T ss_dssp             ---------HHHHH-----TCSEEEECSCCTTCBCG--GGSCTTCEEEECCCE
T ss_pred             ---------hhhhc-----cCCEEEECCCCCCCCcH--HhcCCCcEEEEEecc
Confidence                     01222     268888888874 3222  457888888898864

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=95.91  E-value=0.011  Score=53.61  Aligned_cols=35  Identities=3%  Similarity=-0.005  Sum_probs=30.4

Q ss_pred             CCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          157 GEYIYVSAASG--AVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       157 g~~VlI~ga~g--~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      ++++||+|+++  |+|.++++.+...|++|+++++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            67899999875  999999999999999999887654

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.85  E-value=0.023  Score=50.31  Aligned_cols=90  Identities=18%  Similarity=0.144  Sum_probs=60.0

Q ss_pred             HHHHHHHH---HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          142 MTAWAGFY---EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       142 ~tA~~~l~---~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      ||+...+.   +..---.|.+|+|.|++..+|.-+++++..+|++|++..+....                         
T Consensus       147 cTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~-------------------------  201 (301)
T 1a4i_A          147 CTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH-------------------------  201 (301)
T ss_dssp             HHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS-------------------------
T ss_pred             chHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCccc-------------------------
Confidence            55555443   22222468999999976679999999999999998877533222                         


Q ss_pred             cCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          219 YKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                            +.+.++     .+|+||-++|...+ ---..++++..+|.+|..
T Consensus       202 ------L~~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~  239 (301)
T 1a4i_A          202 ------LDEEVN-----KGDILVVATGQPEM-VKGEWIKPGAIVIDCGIN  239 (301)
T ss_dssp             ------HHHHHT-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCB
T ss_pred             ------HHHHhc-----cCCEEEECCCCccc-CCHHHcCCCcEEEEccCC
Confidence                  222222     27888888887422 112347888899999874

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=95.85  E-value=0.02  Score=48.38  Aligned_cols=107  Identities=10%  Similarity=0.051  Sum_probs=64.4

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  227 (356)
                      ......++.+||=+|  .|.|..++.+++.+  +++|++++.+++..      +.+.+.++ ..|...-+..... +..+
T Consensus        52 ~l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~------~~a~~~~~-~~~~~~~v~~~~~-d~~~  121 (221)
T 3u81_A           52 AVIREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEINPDCA------AITQQMLN-FAGLQDKVTILNG-ASQD  121 (221)
T ss_dssp             HHHHHHCCSEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHH------HHHHHHHH-HHTCGGGEEEEES-CHHH
T ss_pred             HHHHhcCCCEEEEEC--CCCCHHHHHHHHhCCCCCEEEEEeCChHHH------HHHHHHHH-HcCCCCceEEEEC-CHHH
Confidence            334455778999998  45678888888875  68999999998876      22223333 4555321222222 4444


Q ss_pred             HHHHhCC----CCccEEEeCCCchHHH---HH---HHhhccCCeEEEEc
Q 018404          228 ALKRCFP----EGIDIYFEHVGGKMLD---AV---LLNMRLHGRIAACG  266 (356)
Q Consensus       228 ~~~~~~~----~~~d~vid~~g~~~~~---~~---~~~l~~~G~~v~~g  266 (356)
                      .+.....    +.+|+||-......+.   ..   ++.|+|+|.++.-.
T Consensus       122 ~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~~  170 (221)
T 3u81_A          122 LIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADN  170 (221)
T ss_dssp             HGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEEEESC
T ss_pred             HHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhccccCCCeEEEEeC
Confidence            4444332    4799998654432221   11   16899999987543

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.84  E-value=0.013  Score=49.82  Aligned_cols=98  Identities=11%  Similarity=0.053  Sum_probs=65.9

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--C-EEEecCCcccHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--D-DAFNYKEENDLD  226 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~  226 (356)
                      ....+.++++||-.| +|. |..+..+++.. .+|++++.+++..          +.+++.+..  . .++..    +..
T Consensus        64 ~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~~-~~v~~vD~~~~~~----------~~a~~~~~~~~~v~~~~~----d~~  126 (231)
T 1vbf_A           64 DELDLHKGQKVLEIG-TGI-GYYTALIAEIV-DKVVSVEINEKMY----------NYASKLLSYYNNIKLILG----DGT  126 (231)
T ss_dssp             HHTTCCTTCEEEEEC-CTT-SHHHHHHHHHS-SEEEEEESCHHHH----------HHHHHHHTTCSSEEEEES----CGG
T ss_pred             HhcCCCCCCEEEEEc-CCC-CHHHHHHHHHc-CEEEEEeCCHHHH----------HHHHHHHhhcCCeEEEEC----Ccc
Confidence            456788999999998 554 88888888874 8999999998877          666533321  1 22221    111


Q ss_pred             HHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEc
Q 018404          227 AALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +.+.  ..+.+|+|+....- .....+.+.|+++|+++..-
T Consensus       127 ~~~~--~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~  165 (231)
T 1vbf_A          127 LGYE--EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (231)
T ss_dssp             GCCG--GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cccc--cCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEE
Confidence            1111  12379999976655 34468889999999988664

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=95.80  E-value=0.012  Score=53.23  Aligned_cols=100  Identities=14%  Similarity=0.117  Sum_probs=60.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc-CCCE-EEecCCcccHHHHHHHhCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFDD-AFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~-vv~~~~~~~~~~~~~~~~~  234 (356)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.....         +.+. .+ +... ..|..+.+.+.+.+..   
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~---   87 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR---------EHLK-DHPNLTFVEGSIADHALVNQLIGD---   87 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---------GGSC-CCTTEEEEECCTTCHHHHHHHHHH---
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch---------hhHh-hcCCceEEEEeCCCHHHHHHHHhc---
Confidence            568999999999999999988889999999998754320         1121 21 1111 1233332123333332   


Q ss_pred             CCccEEEeCCCc-hH--------------HHHHHHhhccC--CeEEEEcccc
Q 018404          235 EGIDIYFEHVGG-KM--------------LDAVLLNMRLH--GRIAACGMIS  269 (356)
Q Consensus       235 ~~~d~vid~~g~-~~--------------~~~~~~~l~~~--G~~v~~g~~~  269 (356)
                      +.+|+||.+.|. ..              ...+++.+.+.  +++|.+++..
T Consensus        88 ~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~  139 (333)
T 2q1w_A           88 LQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTAL  139 (333)
T ss_dssp             HCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG
T ss_pred             cCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH
Confidence            158999999874 11              12333333332  6899887644

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.77  E-value=0.017  Score=48.92  Aligned_cols=96  Identities=20%  Similarity=0.145  Sum_probs=64.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHh---hcC-----CC--EEEecC
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKN---KFG-----FD--DAFNYK  220 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g-----~~--~vv~~~  220 (356)
                      .+.++++||-.| +| .|..+..+++..|  .+|++++.+++..          +.+++   ..+     ..  .++.. 
T Consensus        74 ~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~----------~~a~~~~~~~~~~~~~~~~v~~~~~-  140 (226)
T 1i1n_A           74 QLHEGAKALDVG-SG-SGILTACFARMVGCTGKVIGIDHIKELV----------DDSVNNVRKDDPTLLSSGRVQLVVG-  140 (226)
T ss_dssp             TSCTTCEEEEET-CT-TSHHHHHHHHHHCTTCEEEEEESCHHHH----------HHHHHHHHHHCTHHHHTSSEEEEES-
T ss_pred             hCCCCCEEEEEc-CC-cCHHHHHHHHHhCCCcEEEEEeCCHHHH----------HHHHHHHHhhcccccCCCcEEEEEC-
Confidence            378899999998 44 4888889998876  6999999998876          44431   222     11  12211 


Q ss_pred             CcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEc
Q 018404          221 EENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       221 ~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  266 (356)
                         +.....  ...+.+|+|+..... ..+..+.+.|+++|+++..-
T Consensus       141 ---d~~~~~--~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          141 ---DGRMGY--AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             ---CGGGCC--GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ---CcccCc--ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence               111000  012379999876665 56688999999999988653

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=95.77  E-value=0.34  Score=43.82  Aligned_cols=136  Identities=14%  Similarity=0.209  Sum_probs=82.0

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-CCEEEEEeCCc-chhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          159 YIYVSAASGAVGQL-VGQFAKLM-GCYVVGSAGSR-EKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       159 ~VlI~ga~g~vG~~-ai~la~~~-g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      +|-|+| +|.+|.. .+...+.. ++++++++... ++.          +.+.+++|...+.+     ++.+.+..   .
T Consensus        25 rigiIG-~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a----------~~~a~~~g~~~~y~-----d~~ell~~---~   85 (350)
T 4had_A           25 RFGIIS-TAKIGRDNVVPAIQDAENCVVTAIASRDLTRA----------REMADRFSVPHAFG-----SYEEMLAS---D   85 (350)
T ss_dssp             EEEEES-CCHHHHHTHHHHHHHCSSEEEEEEECSSHHHH----------HHHHHHHTCSEEES-----SHHHHHHC---S
T ss_pred             EEEEEc-ChHHHHHHHHHHHHhCCCeEEEEEECCCHHHH----------HHHHHHcCCCeeeC-----CHHHHhcC---C
Confidence            799999 8999964 45555555 78998877543 444          44444889876542     55555542   3


Q ss_pred             CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH-HhhcceeeceeeecchhhHHHHHHHHHH
Q 018404          236 GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV-VYKRIRMEGFVVFDYFPQYSRFLDAVLP  313 (356)
Q Consensus       236 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~  313 (356)
                      .+|+|+.|+.. .+...+.++|..+-+ |.+..+-..+..  .. ...... -.+++.+    ...+..++...++.+-+
T Consensus        86 ~iDaV~I~tP~~~H~~~~~~al~aGkh-Vl~EKPla~~~~--ea-~~l~~~a~~~~~~l----~v~~~~R~~p~~~~~k~  157 (350)
T 4had_A           86 VIDAVYIPLPTSQHIEWSIKAADAGKH-VVCEKPLALKAG--DI-DAVIAARDRNKVVV----TEAYMITYSPVWQKVRS  157 (350)
T ss_dssp             SCSEEEECSCGGGHHHHHHHHHHTTCE-EEECSCCCSSGG--GG-HHHHHHHHHHTCCE----EECCGGGGSHHHHHHHH
T ss_pred             CCCEEEEeCCCchhHHHHHHHHhcCCE-EEEeCCcccchh--hH-HHHHHHHHHcCCce----eEeeeeecCHHHHHhhH
Confidence            69999999998 677888888876544 667754321111  01 111111 1222221    11122334566788888


Q ss_pred             HHHcCCCc
Q 018404          314 YIREGKVV  321 (356)
Q Consensus       314 ~~~~g~l~  321 (356)
                      ++++|.|=
T Consensus       158 ~i~~G~iG  165 (350)
T 4had_A          158 LIDEGAIG  165 (350)
T ss_dssp             HHHTTTTS
T ss_pred             hhhcCCCC
Confidence            89998763

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.76  E-value=0.039  Score=48.16  Aligned_cols=97  Identities=12%  Similarity=0.198  Sum_probs=63.7

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc---CCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLM---GCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~---g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~~  227 (356)
                      +++|.+||=+|  .|.|..+..+++..   |++|++++.+++-+          +.+++   +.+...-+..... +   
T Consensus        68 ~~~~~~vLDlG--cGtG~~~~~la~~~~~~~~~v~gvD~s~~ml----------~~A~~~~~~~~~~~~v~~~~~-D---  131 (261)
T 4gek_A           68 VQPGTQVYDLG--CSLGAATLSVRRNIHHDNCKIIAIDNSPAMI----------ERCRRHIDAYKAPTPVDVIEG-D---  131 (261)
T ss_dssp             CCTTCEEEEET--CTTTHHHHHHHHTCCSSSCEEEEEESCHHHH----------HHHHHHHHTSCCSSCEEEEES-C---
T ss_pred             CCCCCEEEEEe--CCCCHHHHHHHHhcCCCCCEEEEEECCHHHH----------HHHHHHHHhhccCceEEEeec-c---
Confidence            78999999998  35677888888874   77999999998876          55542   3343211221111 2   


Q ss_pred             HHHHhCCCCccEEEeCCCc---------hHHHHHHHhhccCCeEEEEcc
Q 018404          228 ALKRCFPEGIDIYFEHVGG---------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                       +.++..+.+|+|+-...-         ..++.+.+.|+|||+++....
T Consensus       132 -~~~~~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          132 -IRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             -TTTCCCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             -cccccccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence             112222368888764331         257889999999999987654

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.76  E-value=0.023  Score=49.97  Aligned_cols=101  Identities=9%  Similarity=0.080  Sum_probs=67.6

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHh---hc-CCCEEEecCCcc
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKN---KF-GFDDAFNYKEEN  223 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~-g~~~vv~~~~~~  223 (356)
                      ....+.++++||-.| +| .|..+..+++..  +.+|++++.+++..          +.+++   .. |...+ ..... 
T Consensus       104 ~~~~~~~~~~VLD~G-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~----------~~a~~~~~~~~g~~~v-~~~~~-  169 (275)
T 1yb2_A          104 MRCGLRPGMDILEVG-VG-SGNMSSYILYALNGKGTLTVVERDEDNL----------KKAMDNLSEFYDIGNV-RTSRS-  169 (275)
T ss_dssp             --CCCCTTCEEEEEC-CT-TSHHHHHHHHHHTTSSEEEEECSCHHHH----------HHHHHHHHTTSCCTTE-EEECS-
T ss_pred             HHcCCCCcCEEEEec-CC-CCHHHHHHHHHcCCCCEEEEEECCHHHH----------HHHHHHHHhcCCCCcE-EEEEC-
Confidence            446788999999998 33 688888888874  67999999998876          54442   23 54221 11111 


Q ss_pred             cHHHHHHHhCCCCccEEEeCCCc--hHHHHHHHhhccCCeEEEEcc
Q 018404          224 DLDAALKRCFPEGIDIYFEHVGG--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ++.+   ....+.+|+|+-....  ..+..+.+.|+++|+++....
T Consensus       170 d~~~---~~~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~  212 (275)
T 1yb2_A          170 DIAD---FISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  212 (275)
T ss_dssp             CTTT---CCCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             chhc---cCcCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            2211   1112379999976654  578899999999999987643

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.76  E-value=0.21  Score=45.38  Aligned_cols=137  Identities=7%  Similarity=-0.065  Sum_probs=79.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEe-CCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM--GCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      -+|.|+| .|.+|...+..++..  ++++++++ +++++.          +.+.+++|. ...  .   ++.+.+.+   
T Consensus        14 ~rvgiiG-~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~----------~~~~~~~~~-~~~--~---~~~~ll~~---   73 (354)
T 3q2i_A           14 IRFALVG-CGRIANNHFGALEKHADRAELIDVCDIDPAAL----------KAAVERTGA-RGH--A---SLTDMLAQ---   73 (354)
T ss_dssp             EEEEEEC-CSTTHHHHHHHHHHTTTTEEEEEEECSSHHHH----------HHHHHHHCC-EEE--S---CHHHHHHH---
T ss_pred             ceEEEEc-CcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHH----------HHHHHHcCC-cee--C---CHHHHhcC---
Confidence            4799999 799998777766666  77877665 455554          444437786 332  2   45555553   


Q ss_pred             CCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHH-HHhhcceeeceeeecchhhHHHHHHHHH
Q 018404          235 EGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMN-VVYKRIRMEGFVVFDYFPQYSRFLDAVL  312 (356)
Q Consensus       235 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~  312 (356)
                      ..+|+|+.|+.. .+...+..+|..+-+ |.+..+-..+.   ........ .-.+++.+    ...+..++...++.+.
T Consensus        74 ~~~D~V~i~tp~~~h~~~~~~al~~gk~-v~~EKP~a~~~---~~~~~l~~~a~~~g~~~----~v~~~~r~~p~~~~~k  145 (354)
T 3q2i_A           74 TDADIVILTTPSGLHPTQSIECSEAGFH-VMTEKPMATRW---EDGLEMVKAADKAKKHL----FVVKQNRRNATLQLLK  145 (354)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTTCE-EEECSSSCSSH---HHHHHHHHHHHHHTCCE----EECCGGGGSHHHHHHH
T ss_pred             CCCCEEEECCCcHHHHHHHHHHHHCCCC-EEEeCCCcCCH---HHHHHHHHHHHHhCCeE----EEEEcccCCHHHHHHH
Confidence            359999999998 566777777776655 55654211100   00001111 11222222    1112233455678888


Q ss_pred             HHHHcCCCcc
Q 018404          313 PYIREGKVVY  322 (356)
Q Consensus       313 ~~~~~g~l~~  322 (356)
                      +++++|.+-.
T Consensus       146 ~~i~~g~iG~  155 (354)
T 3q2i_A          146 RAMQEKRFGR  155 (354)
T ss_dssp             HHHHTTTTCS
T ss_pred             HHHhcCCCCc
Confidence            8999987743

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.71  E-value=0.038  Score=49.62  Aligned_cols=95  Identities=14%  Similarity=0.095  Sum_probs=64.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHHhCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      +||++|  +|.|..+..+++.. +.+|++++.+++-.          +.+++.++..  .-+..... +..+.+.+...+
T Consensus        92 rVLdIG--~G~G~la~~la~~~p~~~v~~VEidp~vi----------~~Ar~~~~~~~~~rv~v~~~-Da~~~l~~~~~~  158 (317)
T 3gjy_A           92 RITHLG--GGACTMARYFADVYPQSRNTVVELDAELA----------RLSREWFDIPRAPRVKIRVD-DARMVAESFTPA  158 (317)
T ss_dssp             EEEEES--CGGGHHHHHHHHHSTTCEEEEEESCHHHH----------HHHHHHSCCCCTTTEEEEES-CHHHHHHTCCTT
T ss_pred             EEEEEE--CCcCHHHHHHHHHCCCcEEEEEECCHHHH----------HHHHHhccccCCCceEEEEC-cHHHHHhhccCC
Confidence            899998  45678888888865 78999999998887          7777555531  00111111 445555544345


Q ss_pred             CccEEEeCCC-----------chHHHHHHHhhccCCeEEEEc
Q 018404          236 GIDIYFEHVG-----------GKMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       236 ~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .||+||-..-           .+.+..+.+.|+++|.++..-
T Consensus       159 ~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~  200 (317)
T 3gjy_A          159 SRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC  200 (317)
T ss_dssp             CEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence            7998876321           135789999999999988543

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.69  E-value=0.021  Score=51.69  Aligned_cols=88  Identities=9%  Similarity=0.058  Sum_probs=59.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++....          +... .+|...    .   ++.+.+.+    
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~----------~~~~-~~g~~~----~---~l~ell~~----  200 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDT----------QTEQ-RLGLRQ----V---ACSELFAS----  200 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCH----------HHHH-HHTEEE----C---CHHHHHHH----
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcH----------hHHH-hcCcee----C---CHHHHHhh----
Confidence            468999999 99999999999999999999999887443          4444 555421    1   33334433    


Q ss_pred             CccEEEeCCCc-h----HH-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|+-++.. +    .+ ...+..|+++..+|.++.
T Consensus       201 -aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          201 -SDFILLALPLNADTLHLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             -CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             -CCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence             5677766552 1    11 355666677777766664

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=95.66  E-value=0.018  Score=51.34  Aligned_cols=36  Identities=19%  Similarity=0.135  Sum_probs=32.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      +|||+||+|.+|..+++.+...|++|++++++.+..
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (312)
T 3ko8_A            2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGR   37 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCc
Confidence            699999999999999999999999999999876654

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.66  E-value=0.052  Score=49.15  Aligned_cols=88  Identities=11%  Similarity=0.083  Sum_probs=61.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...++.++..|.+|++.+++.++.          +.+. ++|....       ++.+.+.+    
T Consensus       154 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~----------~~~~-~~g~~~~-------~l~e~l~~----  210 (330)
T 2gcg_A          154 TQSTVGIIG-LGRIGQAIARRLKPFGVQRFLYTGRQPRP----------EEAA-EFQAEFV-------STPELAAQ----  210 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCCEEEEESSSCCH----------HHHH-TTTCEEC-------CHHHHHHH----
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcch----------hHHH-hcCceeC-------CHHHHHhh----
Confidence            367999999 89999999999999999999999877665          5455 5554311       23333433    


Q ss_pred             CccEEEeCCCch-----HH-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGGK-----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~~-----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|+.++...     .+ ...+..++++..++.++.
T Consensus       211 -aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          211 -SDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             -CSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             -CCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence             68888877641     12 345667777777776654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=95.63  E-value=0.026  Score=51.03  Aligned_cols=35  Identities=17%  Similarity=0.092  Sum_probs=31.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      +.+|||+||+|.+|..+++.+...|++|++++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   36 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFH   36 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCC
Confidence            36899999999999999988888899999998753

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.60  E-value=0.052  Score=47.92  Aligned_cols=90  Identities=11%  Similarity=-0.000  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCC---CEEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGF---DDAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~~  231 (356)
                      .+.+++|+| +|++|.+++..+...|+ +|++..|+.++.          +.+.++++.   ..+++..+          
T Consensus       125 ~~k~vlvlG-aGg~g~aia~~L~~~G~~~v~v~~R~~~~a----------~~la~~~~~~~~~~~~~~~~----------  183 (281)
T 3o8q_A          125 KGATILLIG-AGGAARGVLKPLLDQQPASITVTNRTFAKA----------EQLAELVAAYGEVKAQAFEQ----------  183 (281)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTCCSEEEEEESSHHHH----------HHHHHHHGGGSCEEEEEGGG----------
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhcCCCeEEEEECCHHHH----------HHHHHHhhccCCeeEeeHHH----------
Confidence            578999999 68999999998889997 999999998876          444324432   12333221          


Q ss_pred             hCCCCccEEEeCCCchHHHH----HHHhhccCCeEEEEcc
Q 018404          232 CFPEGIDIYFEHVGGKMLDA----VLLNMRLHGRIAACGM  267 (356)
Q Consensus       232 ~~~~~~d~vid~~g~~~~~~----~~~~l~~~G~~v~~g~  267 (356)
                      .. ..+|+||+|++......    -...++++..++.+.+
T Consensus       184 l~-~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY  222 (281)
T 3o8q_A          184 LK-QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMY  222 (281)
T ss_dssp             CC-SCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCC
T ss_pred             hc-CCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecC
Confidence            11 36999999997643221    1234555555556543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.60  E-value=0.018  Score=53.07  Aligned_cols=74  Identities=16%  Similarity=0.175  Sum_probs=49.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~  235 (356)
                      +.+|||+||+|.+|..+++.+...|++|++++++..+.          .... ..+...+ .|..+.    +.+.+... 
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~-~~~v~~~~~Dl~d~----~~~~~~~~-   92 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH----------MTED-MFCDEFHLVDLRVM----ENCLKVTE-   92 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS----------SCGG-GTCSEEEECCTTSH----HHHHHHHT-
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccc----------hhhc-cCCceEEECCCCCH----HHHHHHhC-
Confidence            46899999999999999998888899999999887654          2221 2233221 233332    12222222 


Q ss_pred             CccEEEeCCCc
Q 018404          236 GIDIYFEHVGG  246 (356)
Q Consensus       236 ~~d~vid~~g~  246 (356)
                      ++|+||.+.|.
T Consensus        93 ~~d~Vih~A~~  103 (379)
T 2c5a_A           93 GVDHVFNLAAD  103 (379)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEECcee
Confidence            59999999873

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=95.59  E-value=0.017  Score=48.33  Aligned_cols=101  Identities=19%  Similarity=0.197  Sum_probs=63.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR  231 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  231 (356)
                      ..++.+||-.|  .|.|..+..+++..  +.+|++++.+++..      +.+.+.++ ..+....+..... +..+.+..
T Consensus        54 ~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~------~~a~~~~~-~~~~~~~v~~~~~-d~~~~~~~  123 (210)
T 3c3p_A           54 IKQPQLVVVPG--DGLGCASWWFARAISISSRVVMIDPDRDNV------EHARRMLH-DNGLIDRVELQVG-DPLGIAAG  123 (210)
T ss_dssp             HHCCSEEEEES--CGGGHHHHHHHTTSCTTCEEEEEESCHHHH------HHHHHHHH-HHSGGGGEEEEES-CHHHHHTT
T ss_pred             hhCCCEEEEEc--CCccHHHHHHHHhCCCCCEEEEEECCHHHH------HHHHHHHH-HCCCCceEEEEEe-cHHHHhcc
Confidence            34678999998  46788888999886  67999999998876      12222223 3444211111111 33333332


Q ss_pred             hCCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          232 CFPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       232 ~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      . .+ +|+||-....    ..+..+.+.|+++|.++.-.
T Consensus       124 ~-~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  160 (210)
T 3c3p_A          124 Q-RD-IDILFMDCDVFNGADVLERMNRCLAKNALLIAVN  160 (210)
T ss_dssp             C-CS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred             C-CC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence            2 34 9999853321    46788889999999988643

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.58  E-value=0.24  Score=44.85  Aligned_cols=136  Identities=13%  Similarity=0.246  Sum_probs=78.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEe-CCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      +|.|+| .|.+|...+..++.. ++++++++ +++++.          +.+.+++|...+.+     ++.+.+.+   ..
T Consensus         4 rvgiIG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~----------~~~~~~~~~~~~~~-----~~~~ll~~---~~   64 (344)
T 3ezy_A            4 RIGVIG-LGRIGTIHAENLKMIDDAILYAISDVREDRL----------REMKEKLGVEKAYK-----DPHELIED---PN   64 (344)
T ss_dssp             EEEEEC-CSHHHHHHHHHGGGSTTEEEEEEECSCHHHH----------HHHHHHHTCSEEES-----SHHHHHHC---TT
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCcEEEEEECCCHHHH----------HHHHHHhCCCceeC-----CHHHHhcC---CC
Confidence            688999 799998766666555 67888665 455554          44443778654432     45545542   26


Q ss_pred             ccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH-HhhcceeeceeeecchhhHHHHHHHHHHH
Q 018404          237 IDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV-VYKRIRMEGFVVFDYFPQYSRFLDAVLPY  314 (356)
Q Consensus       237 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  314 (356)
                      +|+|+.|+.. .+...+..+|..+-+ |.+..+-..+.   ......... -.+++.+    ...+..++...++.+.++
T Consensus        65 ~D~V~i~tp~~~h~~~~~~al~~gk~-v~~EKP~~~~~---~e~~~l~~~a~~~g~~~----~v~~~~R~~p~~~~~k~~  136 (344)
T 3ezy_A           65 VDAVLVCSSTNTHSELVIACAKAKKH-VFCEKPLSLNL---ADVDRMIEETKKADVIL----FTGFNRRFDRNFKKLKEA  136 (344)
T ss_dssp             CCEEEECSCGGGHHHHHHHHHHTTCE-EEEESCSCSCH---HHHHHHHHHHHHHTCCE----EEECGGGGCHHHHHHHHH
T ss_pred             CCEEEEcCCCcchHHHHHHHHhcCCe-EEEECCCCCCH---HHHHHHHHHHHHhCCcE----EEeecccCCHHHHHHHHH
Confidence            9999999998 566777777776655 44654211100   000111111 1222221    112233445678888889


Q ss_pred             HHcCCCc
Q 018404          315 IREGKVV  321 (356)
Q Consensus       315 ~~~g~l~  321 (356)
                      +++|.+-
T Consensus       137 i~~G~iG  143 (344)
T 3ezy_A          137 VENGTIG  143 (344)
T ss_dssp             HHTTTTS
T ss_pred             HHcCCCC
Confidence            9998764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=95.56  E-value=0.034  Score=50.08  Aligned_cols=38  Identities=21%  Similarity=0.205  Sum_probs=32.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .+.+|||+||+|.+|..++..+...|++|++++++.+.
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   41 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTN   41 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcch
Confidence            46789999999999999998888899999999987663

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.55  E-value=0.064  Score=46.97  Aligned_cols=90  Identities=10%  Similarity=0.175  Sum_probs=62.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      .+|||+|+ |.+|..++..+...|.+|++++++.++.          +.+. ..+... +..+-. ++    .   -.++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~-~~~~~~-~~~D~~-d~----~---~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQM----------EAIR-ASGAEP-LLWPGE-EP----S---LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGH----------HHHH-HTTEEE-EESSSS-CC----C---CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhh----------hhHh-hCCCeE-EEeccc-cc----c---cCCC
Confidence            48999997 9999999999988999999999998886          6666 555432 222221 21    1   2379


Q ss_pred             cEEEeCCCch-----HHHHHHHhhcc----CCeEEEEccc
Q 018404          238 DIYFEHVGGK-----MLDAVLLNMRL----HGRIAACGMI  268 (356)
Q Consensus       238 d~vid~~g~~-----~~~~~~~~l~~----~G~~v~~g~~  268 (356)
                      |+||.+.+..     .....++.++.    -.++|.+++.
T Consensus        65 d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~  104 (286)
T 3ius_A           65 THLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTT  104 (286)
T ss_dssp             CEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred             CEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence            9999999741     23444444433    2688887754

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.53  E-value=0.027  Score=49.91  Aligned_cols=97  Identities=8%  Similarity=0.023  Sum_probs=66.0

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCC---EEEecCCcccHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFD---DAFNYKEENDLD  226 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~---~vv~~~~~~~~~  226 (356)
                      .+.++.+||-.| + |.|..+..+++..+++|++++.++..+          +.+++   ..|..   .++..+-. ++ 
T Consensus        79 ~~~~~~~vLDiG-c-G~G~~~~~l~~~~~~~v~gvD~s~~~~----------~~a~~~~~~~~~~~~~~~~~~d~~-~~-  144 (297)
T 2o57_A           79 VLQRQAKGLDLG-A-GYGGAARFLVRKFGVSIDCLNIAPVQN----------KRNEEYNNQAGLADNITVKYGSFL-EI-  144 (297)
T ss_dssp             CCCTTCEEEEET-C-TTSHHHHHHHHHHCCEEEEEESCHHHH----------HHHHHHHHHHTCTTTEEEEECCTT-SC-
T ss_pred             CCCCCCEEEEeC-C-CCCHHHHHHHHHhCCEEEEEeCCHHHH----------HHHHHHHHhcCCCcceEEEEcCcc-cC-
Confidence            778999999998 3 478888889998899999999998876          44431   33431   22221111 10 


Q ss_pred             HHHHHhCCCCccEEEeCCCc-------hHHHHHHHhhccCCeEEEEcc
Q 018404          227 AALKRCFPEGIDIYFEHVGG-------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                          .+..+.+|+|+....-       ..+..+.+.|+|+|+++....
T Consensus       145 ----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  188 (297)
T 2o57_A          145 ----PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  188 (297)
T ss_dssp             ----SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ----CCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence                1112379999864332       467899999999999987654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=95.53  E-value=0.025  Score=51.65  Aligned_cols=36  Identities=17%  Similarity=0.256  Sum_probs=29.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .+|||+||+|.+|..+++.+...|++|++++++.+.
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            579999999999999999888889999999987553

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.52  E-value=0.035  Score=50.66  Aligned_cols=89  Identities=22%  Similarity=0.267  Sum_probs=63.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++....          +.+. +.|...+    +  ++.+.+.+    
T Consensus       163 ~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~----------~~~~-~~g~~~~----~--~l~ell~~----  220 (351)
T 3jtm_A          163 EGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAP----------ELEK-ETGAKFV----E--DLNEMLPK----  220 (351)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCH----------HHHH-HHCCEEC----S--CHHHHGGG----
T ss_pred             cCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCH----------HHHH-hCCCeEc----C--CHHHHHhc----
Confidence            578999999 99999999999999999999999886554          5555 6665321    1  34444433    


Q ss_pred             CccEEEeCCCc-h----HH-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|+-++.. +    .+ ...+..|+++..+|.++.
T Consensus       221 -aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          221 -CDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             -CSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             -CCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence             6788777663 1    11 466677777777777764

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.52  E-value=0.29  Score=43.98  Aligned_cols=134  Identities=10%  Similarity=0.076  Sum_probs=74.1

Q ss_pred             EEEEecCCchHHHHH-H-HHHHHcCCEEEEEe-CCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          159 YIYVSAASGAVGQLV-G-QFAKLMGCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       159 ~VlI~ga~g~vG~~a-i-~la~~~g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      +|.|+| .|.+|... + .+.+ .++++++++ ++.++.          +.+.+++|...+  +.   ++.+.+.+   .
T Consensus         2 ~vgiiG-~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~----------~~~~~~~g~~~~--~~---~~~~~l~~---~   61 (332)
T 2glx_A            2 RWGLIG-ASTIAREWVIGAIRA-TGGEVVSMMSTSAERG----------AAYATENGIGKS--VT---SVEELVGD---P   61 (332)
T ss_dssp             EEEEES-CCHHHHHTHHHHHHH-TTCEEEEEECSCHHHH----------HHHHHHTTCSCC--BS---CHHHHHTC---T
T ss_pred             eEEEEc-ccHHHHHhhhHHhhc-CCCeEEEEECCCHHHH----------HHHHHHcCCCcc--cC---CHHHHhcC---C
Confidence            588999 79999875 5 4444 788887665 444454          444437776422  21   44444432   2


Q ss_pred             CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCcc-ccchHHHH-hhcceeeceeeecchhhHHHHHHHHH
Q 018404          236 GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEG-VHNLMNVV-YKRIRMEGFVVFDYFPQYSRFLDAVL  312 (356)
Q Consensus       236 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~  312 (356)
                      .+|+|+.|+.. .....+..+|..+-+ |.+..+...    ... ........ .+++.+.    ..+...+...++.+.
T Consensus        62 ~~D~V~i~tp~~~h~~~~~~al~~Gk~-v~~ekP~~~----~~~~~~~l~~~a~~~g~~~~----~~~~~r~~p~~~~~~  132 (332)
T 2glx_A           62 DVDAVYVSTTNELHREQTLAAIRAGKH-VLCEKPLAM----TLEDAREMVVAAREAGVVLG----TNHHLRNAAAHRAMR  132 (332)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHHTTCE-EEECSSSCS----SHHHHHHHHHHHHHHTCCEE----ECCCGGGSHHHHHHH
T ss_pred             CCCEEEEeCChhHhHHHHHHHHHCCCe-EEEeCCCcC----CHHHHHHHHHHHHHcCCEEE----EeehhhcCHHHHHHH
Confidence            69999999998 566677777776544 445432110    000 01111111 2233221    111223345677788


Q ss_pred             HHHHcCCCc
Q 018404          313 PYIREGKVV  321 (356)
Q Consensus       313 ~~~~~g~l~  321 (356)
                      +++++|.+-
T Consensus       133 ~~i~~g~iG  141 (332)
T 2glx_A          133 DAIAEGRIG  141 (332)
T ss_dssp             HHHHTTTTS
T ss_pred             HHHHcCCCC
Confidence            888888764

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.51  E-value=0.11  Score=45.87  Aligned_cols=86  Identities=15%  Similarity=0.115  Sum_probs=58.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      .+|.|+| .|.+|...++.+...|.+|++.++++++.          +.+. +.|...   . .  +..+.+.+     .
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~----------~~~~-~~g~~~---~-~--~~~~~~~~-----a   58 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKA----------EELA-ALGAER---A-A--TPCEVVES-----C   58 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGG----------HHHH-HTTCEE---C-S--SHHHHHHH-----C
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHH----------HHHH-HCCCee---c-C--CHHHHHhc-----C
Confidence            3789999 89999999999999999999999999987          7777 556421   1 1  33334433     5


Q ss_pred             cEEEeCCCc-hHHHHHH-------HhhccCCeEEEEc
Q 018404          238 DIYFEHVGG-KMLDAVL-------LNMRLHGRIAACG  266 (356)
Q Consensus       238 d~vid~~g~-~~~~~~~-------~~l~~~G~~v~~g  266 (356)
                      |+||.|+.. ..+...+       ..++++..++.++
T Consensus        59 Dvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           59 PVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             SEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence            777777774 3444333       3455555555553

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=95.48  E-value=0.023  Score=50.54  Aligned_cols=73  Identities=14%  Similarity=0.093  Sum_probs=49.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~  234 (356)
                      .+|||+||+|.+|..+++.+...  |.+|++++++..+.          +...   +... ..|..+.+.+.+.+++.  
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------~~~~---~~~~~~~D~~d~~~~~~~~~~~--   67 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT----------DVVN---SGPFEVVNALDFNQIEHLVEVH--   67 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC----------HHHH---SSCEEECCTTCHHHHHHHHHHT--
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc----------cccC---CCceEEecCCCHHHHHHHHhhc--
Confidence            57999999999999999887777  88999999887664          3222   2322 22333321333333322  


Q ss_pred             CCccEEEeCCCc
Q 018404          235 EGIDIYFEHVGG  246 (356)
Q Consensus       235 ~~~d~vid~~g~  246 (356)
                       ++|+||.+.|.
T Consensus        68 -~~d~vih~a~~   78 (312)
T 2yy7_A           68 -KITDIYLMAAL   78 (312)
T ss_dssp             -TCCEEEECCCC
T ss_pred             -CCCEEEECCcc
Confidence             69999999885

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.48  E-value=0.08  Score=47.99  Aligned_cols=36  Identities=14%  Similarity=0.113  Sum_probs=32.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +.+|||+||+|.+|..+++.+...|.+|++++++..
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   62 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFAT   62 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence            468999999999999999988888999999998654

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.47  E-value=0.031  Score=49.11  Aligned_cols=94  Identities=15%  Similarity=0.054  Sum_probs=61.9

Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE
Q 018404          138 GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF  217 (356)
Q Consensus       138 ~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv  217 (356)
                      ||+..-....|.+...--.|.+|+|.|++..+|.-+++++...|++|++..+...                         
T Consensus       140 PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~-------------------------  194 (288)
T 1b0a_A          140 PCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-------------------------  194 (288)
T ss_dssp             CHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-------------------------
T ss_pred             CCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch-------------------------
Confidence            4333333444444333346899999997777999999999999999988754322                         


Q ss_pred             ecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          218 NYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                            ++.+.+++     +|+||.++|...+ ---+.++++..++.+|..
T Consensus       195 ------~L~~~~~~-----ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~  233 (288)
T 1b0a_A          195 ------NLRHHVEN-----ADLLIVAVGKPGF-IPGDWIKEGAIVIDVGIN  233 (288)
T ss_dssp             ------CHHHHHHH-----CSEEEECSCCTTC-BCTTTSCTTCEEEECCCE
T ss_pred             ------hHHHHhcc-----CCEEEECCCCcCc-CCHHHcCCCcEEEEccCC
Confidence                  22223333     6888888887432 112336888888888864

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.47  E-value=0.051  Score=49.80  Aligned_cols=86  Identities=15%  Similarity=0.180  Sum_probs=60.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++...           +.+. +.|+..    .   ++.+.+.+    
T Consensus       175 ~gktvGIIG-lG~IG~~vA~~l~~fG~~V~~~d~~~~~-----------~~~~-~~g~~~----~---~l~ell~~----  230 (365)
T 4hy3_A          175 AGSEIGIVG-FGDLGKALRRVLSGFRARIRVFDPWLPR-----------SMLE-ENGVEP----A---SLEDVLTK----  230 (365)
T ss_dssp             SSSEEEEEC-CSHHHHHHHHHHTTSCCEEEEECSSSCH-----------HHHH-HTTCEE----C---CHHHHHHS----
T ss_pred             CCCEEEEec-CCcccHHHHHhhhhCCCEEEEECCCCCH-----------HHHh-hcCeee----C---CHHHHHhc----
Confidence            378999999 9999999999999999999999987533           4444 556531    1   34444443    


Q ss_pred             CccEEEeCCCch-----HH-HHHHHhhccCCeEEEEc
Q 018404          236 GIDIYFEHVGGK-----ML-DAVLLNMRLHGRIAACG  266 (356)
Q Consensus       236 ~~d~vid~~g~~-----~~-~~~~~~l~~~G~~v~~g  266 (356)
                       .|+|+-++...     .+ ...+..|++++.+|.++
T Consensus       231 -aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~a  266 (365)
T 4hy3_A          231 -SDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLS  266 (365)
T ss_dssp             -CSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECS
T ss_pred             -CCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECc
Confidence             67887765531     11 46677788888888777

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=95.46  E-value=0.019  Score=51.82  Aligned_cols=36  Identities=11%  Similarity=0.107  Sum_probs=32.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchh
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKV  194 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~  194 (356)
                      +|||+||+|.+|..+++.+... |++|++++++.++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~   38 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI   38 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchH
Confidence            6999999999999999888887 89999999987765

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.46  E-value=0.048  Score=49.79  Aligned_cols=88  Identities=25%  Similarity=0.297  Sum_probs=64.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++...           +.+. +.|...+    +  ++.+.+.+    
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-----------~~~~-~~g~~~~----~--~l~ell~~----  215 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGRENSK-----------ERAR-ADGFAVA----E--SKDALFEQ----  215 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSHHHH-----------HHHH-HTTCEEC----S--SHHHHHHH----
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCCCCH-----------HHHH-hcCceEe----C--CHHHHHhh----
Confidence            467999999 9999999999999999999999877533           4444 5665321    1  45555554    


Q ss_pred             CccEEEeCCCc-h-----HHHHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K-----MLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~-----~~~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|+-++.. +     .-...+..|+++..+|.++.
T Consensus       216 -aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          216 -SDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             -CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             -CCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence             6888887753 2     12466788899999988874

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.46  E-value=0.047  Score=47.93  Aligned_cols=91  Identities=11%  Similarity=0.021  Sum_probs=61.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCC--CEEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGF--DDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.+++|+| +|++|.+++..+...|+ +|+++.|+.++.          +.+.++++.  ...+.+.   ++    .. 
T Consensus       119 ~~k~~lvlG-aGg~~~aia~~L~~~G~~~v~i~~R~~~~a----------~~la~~~~~~~~~~~~~~---~l----~~-  179 (272)
T 3pwz_A          119 RNRRVLLLG-AGGAVRGALLPFLQAGPSELVIANRDMAKA----------LALRNELDHSRLRISRYE---AL----EG-  179 (272)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTCCSEEEEECSCHHHH----------HHHHHHHCCTTEEEECSG---GG----TT-
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHcCCCEEEEEeCCHHHH----------HHHHHHhccCCeeEeeHH---Hh----cc-
Confidence            578999999 69999999999999997 999999998886          555435543  1222221   11    11 


Q ss_pred             CCCCccEEEeCCCchHHHH----HHHhhccCCeEEEEcc
Q 018404          233 FPEGIDIYFEHVGGKMLDA----VLLNMRLHGRIAACGM  267 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~~~~----~~~~l~~~G~~v~~g~  267 (356)
                        ..+|+||+|+.......    -...++++..++.+-.
T Consensus       180 --~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY  216 (272)
T 3pwz_A          180 --QSFDIVVNATSASLTADLPPLPADVLGEAALAYELAY  216 (272)
T ss_dssp             --CCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESSC
T ss_pred             --cCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeec
Confidence              36999999987532111    1245677777776644

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.45  E-value=0.024  Score=52.12  Aligned_cols=89  Identities=12%  Similarity=0.095  Sum_probs=60.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCY-VVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      .|.+|.|+| .|.+|...++.++.+|++ |++.+++....          +.+. ++|+..+    .  ++.+.+.    
T Consensus       163 ~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~----------~~~~-~~g~~~~----~--~l~ell~----  220 (364)
T 2j6i_A          163 EGKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQALPK----------DAEE-KVGARRV----E--NIEELVA----  220 (364)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCCCH----------HHHH-HTTEEEC----S--SHHHHHH----
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCccch----------hHHH-hcCcEec----C--CHHHHHh----
Confidence            578999999 899999999999999996 99999877655          5444 5554211    1  3333333    


Q ss_pred             CCccEEEeCCCch-----HH-HHHHHhhccCCeEEEEcc
Q 018404          235 EGIDIYFEHVGGK-----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g~~-----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                       ..|+|+.++...     .+ ...+..|++++.+|.++.
T Consensus       221 -~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          221 -QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             -TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             -cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence             267777766641     12 345566777777776664

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.44  E-value=0.087  Score=49.83  Aligned_cols=93  Identities=13%  Similarity=0.129  Sum_probs=59.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHHHHHHhCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDAALKRCFP  234 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~~~~~~  234 (356)
                      +.+|+|+| +|++|.+.++.+...|++|++.+++.++.          +.+.+.++....  +|..+.+++.+.+    .
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a----------~~la~~~~~~~~~~~Dv~d~~~l~~~l----~   67 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESA----------KKLSAGVQHSTPISLDVNDDAALDAEV----A   67 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHH----------HHTTTTCTTEEEEECCTTCHHHHHHHH----T
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHH----------HHHHHhcCCceEEEeecCCHHHHHHHH----c
Confidence            56899998 89999999988888899999999887776          544423432112  2333221222222    2


Q ss_pred             CCccEEEeCCCch-HHHHHHHhhccCCeEEEE
Q 018404          235 EGIDIYFEHVGGK-MLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       235 ~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  265 (356)
                       ++|+|++|++.. .......++.++.+++..
T Consensus        68 -~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           68 -KHDLVISLIPYTFHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             -TSSEEEECCC--CHHHHHHHHHHHTCEEEES
T ss_pred             -CCcEEEECCccccchHHHHHHHhCCCeEEEe
Confidence             599999999863 333345566666666654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=95.43  E-value=0.046  Score=62.83  Aligned_cols=87  Identities=14%  Similarity=0.024  Sum_probs=57.1

Q ss_pred             CCCCEEEEecCCch-HHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc---CCCE---EEecCCcccHHH
Q 018404          155 KKGEYIYVSAASGA-VGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF---GFDD---AFNYKEENDLDA  227 (356)
Q Consensus       155 ~~g~~VlI~ga~g~-vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~  227 (356)
                      -.|+++||+||++| +|.+.++.+...|++|++++++.++.    ..+.+ +.+.+++   |...   ..|-.+.++...
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~----~~~~~-~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~ 2208 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDD----RLAFY-KQLYRDHARFDATLWVVPANMASYSDIDK 2208 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHH----HHHHH-HHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhh----hhHHH-HHHHHHHhhcCCeEEEEEecCCCHHHHHH
Confidence            46899999999999 99999999999999999999886651    00001 2222233   3221   134444324444


Q ss_pred             HHHHhCC------CCccEEEeCCCc
Q 018404          228 ALKRCFP------EGIDIYFEHVGG  246 (356)
Q Consensus       228 ~~~~~~~------~~~d~vid~~g~  246 (356)
                      .+.+...      |++|+++++.|.
T Consensus      2209 lv~~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2209 LVEWVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HHHHHTSCCEEEESSSEEEECCCCC
T ss_pred             HHHHHHhhhhhhcCCCCEEEECCCc
Confidence            4444433      478999998884

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.42  E-value=0.17  Score=42.60  Aligned_cols=93  Identities=10%  Similarity=-0.012  Sum_probs=61.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      +|+|.| .|.+|...++.+...|.+|+++++++++.          +.+.+..+.. ++..+.. + .+.+++..-..+|
T Consensus         2 ~iiIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~----------~~l~~~~~~~-~i~gd~~-~-~~~l~~a~i~~ad   67 (218)
T 3l4b_C            2 KVIIIG-GETTAYYLARSMLSRKYGVVIINKDRELC----------EEFAKKLKAT-IIHGDGS-H-KEILRDAEVSKND   67 (218)
T ss_dssp             CEEEEC-CHHHHHHHHHHHHHTTCCEEEEESCHHHH----------HHHHHHSSSE-EEESCTT-S-HHHHHHHTCCTTC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHH----------HHHHHHcCCe-EEEcCCC-C-HHHHHhcCcccCC
Confidence            488999 69999999999999999999999998887          7665355654 3332221 1 2345544223799


Q ss_pred             EEEeCCCchHHHHH----HHhhccCCeEEEE
Q 018404          239 IYFEHVGGKMLDAV----LLNMRLHGRIAAC  265 (356)
Q Consensus       239 ~vid~~g~~~~~~~----~~~l~~~G~~v~~  265 (356)
                      +++-+++.+..+..    .+.+.+..+++..
T Consensus        68 ~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~   98 (218)
T 3l4b_C           68 VVVILTPRDEVNLFIAQLVMKDFGVKRVVSL   98 (218)
T ss_dssp             EEEECCSCHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred             EEEEecCCcHHHHHHHHHHHHHcCCCeEEEE
Confidence            99999998644322    2233344555543

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=95.42  E-value=0.014  Score=49.83  Aligned_cols=103  Identities=13%  Similarity=0.121  Sum_probs=65.2

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDL  225 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~  225 (356)
                      ......++.+||=.|  .|.|..++.+++.. +.+|++++.+++..      +.+.+.++ ..+..   .++..    +.
T Consensus        65 ~~~~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~~~~~~------~~a~~~~~-~~~~~~~v~~~~~----d~  131 (232)
T 3ntv_A           65 QLIRMNNVKNILEIG--TAIGYSSMQFASISDDIHVTTIERNETMI------QYAKQNLA-TYHFENQVRIIEG----NA  131 (232)
T ss_dssp             HHHHHHTCCEEEEEC--CSSSHHHHHHHTTCTTCEEEEEECCHHHH------HHHHHHHH-HTTCTTTEEEEES----CG
T ss_pred             HHHhhcCCCEEEEEe--CchhHHHHHHHHhCCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCcEEEEEC----CH
Confidence            334456788999998  45677888888855 77999999998876      22223333 44542   22222    22


Q ss_pred             HHHHH-HhCCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          226 DAALK-RCFPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       226 ~~~~~-~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .+.+. .. .+.+|+||-....    ..+..+.+.|+|+|.++.-.
T Consensus       132 ~~~~~~~~-~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~  176 (232)
T 3ntv_A          132 LEQFENVN-DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDN  176 (232)
T ss_dssp             GGCHHHHT-TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             HHHHHhhc-cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence            22222 22 3479999854432    35678889999999998743

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=95.42  E-value=0.033  Score=50.66  Aligned_cols=33  Identities=18%  Similarity=0.118  Sum_probs=28.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSR  191 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~  191 (356)
                      +|||+||+|.+|..+++.+... |++|++++++.
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~   35 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT   35 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCC
Confidence            5999999999999998877777 79999998764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.41  E-value=0.015  Score=53.08  Aligned_cols=37  Identities=16%  Similarity=0.251  Sum_probs=31.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcch
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREK  193 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~  193 (356)
                      +.+|||+||+|.+|..+++.+...| .+|+++.++...
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   83 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG   83 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSG
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCc
Confidence            4679999999999999999888889 899999987654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=95.41  E-value=0.1  Score=47.59  Aligned_cols=99  Identities=15%  Similarity=0.113  Sum_probs=60.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc-CCCEE-Ee-cCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFDDA-FN-YKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~v-v~-~~~~~~~~~~~~~~~  233 (356)
                      +.+|+|+||+|.+|..+++.+...|.+|++++++.++.        ..+.+. .. +...+ .| ..+.    +.+.+..
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--------~~~~l~-~~~~v~~v~~D~l~d~----~~l~~~~   71 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL--------IAEELQ-AIPNVTLFQGPLLNNV----PLMDTLF   71 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH--------HHHHHH-TSTTEEEEESCCTTCH----HHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh--------hHHHHh-hcCCcEEEECCccCCH----HHHHHHH
Confidence            46799999999999999988888899999999887653        002232 22 22211 23 3232    2233322


Q ss_pred             CCCccEEEeCCCch------HHHHHHHhhccC---CeEEEEcccc
Q 018404          234 PEGIDIYFEHVGGK------MLDAVLLNMRLH---GRIAACGMIS  269 (356)
Q Consensus       234 ~~~~d~vid~~g~~------~~~~~~~~l~~~---G~~v~~g~~~  269 (356)
                      . ++|.||.+.+..      ....+++.++..   +++|.+++..
T Consensus        72 ~-~~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           72 E-GAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             T-TCSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred             h-cCCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence            2 589999776542      123444444333   5899887653

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=95.41  E-value=0.025  Score=51.99  Aligned_cols=36  Identities=17%  Similarity=0.226  Sum_probs=32.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .+|||+||+|.+|..+++.+...|++|++++++.++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~   64 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN   64 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence            589999999999999999888899999999987654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=95.40  E-value=0.053  Score=48.21  Aligned_cols=36  Identities=17%  Similarity=0.138  Sum_probs=33.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +.+|||+||+|.+|..++..+...|.+|++++++..
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            578999999999999999999999999999998766

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.40  E-value=0.29  Score=44.24  Aligned_cols=136  Identities=15%  Similarity=0.111  Sum_probs=77.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc-CCEEEEEe-CCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM-GCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      -+|.|+| .|.+|...+..++.. ++++++++ ++.++.          +.+.+++|. .+.  .   ++.+.+.+   .
T Consensus         5 ~rvgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~----------~~~a~~~g~-~~~--~---~~~~~l~~---~   64 (344)
T 3euw_A            5 LRIALFG-AGRIGHVHAANIAANPDLELVVIADPFIEGA----------QRLAEANGA-EAV--A---SPDEVFAR---D   64 (344)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHH----------HHHHHTTTC-EEE--S---SHHHHTTC---S
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCcEEEEEECCCHHHH----------HHHHHHcCC-cee--C---CHHHHhcC---C
Confidence            3789999 799998888777766 77888655 444454          444436773 332  2   44433331   2


Q ss_pred             CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH-hhcceeeceeeecchhhHHHHHHHHHH
Q 018404          236 GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV-YKRIRMEGFVVFDYFPQYSRFLDAVLP  313 (356)
Q Consensus       236 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~  313 (356)
                      .+|+|+.|+.. .+...+..++..+-+ |.+..+-..+.   .......... .+++.    ....+..++...++.+.+
T Consensus        65 ~~D~V~i~tp~~~h~~~~~~al~~gk~-v~~EKP~~~~~---~~~~~l~~~a~~~g~~----~~v~~~~r~~p~~~~~k~  136 (344)
T 3euw_A           65 DIDGIVIGSPTSTHVDLITRAVERGIP-ALCEKPIDLDI---EMVRACKEKIGDGASK----VMLGFNRRFDPSFAAINA  136 (344)
T ss_dssp             CCCEEEECSCGGGHHHHHHHHHHTTCC-EEECSCSCSCH---HHHHHHHHHHGGGGGG----EEECCGGGGCHHHHHHHH
T ss_pred             CCCEEEEeCCchhhHHHHHHHHHcCCc-EEEECCCCCCH---HHHHHHHHHHHhcCCe----EEecchhhcCHHHHHHHH
Confidence            69999999998 566777777776655 55554211100   0000111111 22221    112223344567788888


Q ss_pred             HHHcCCCc
Q 018404          314 YIREGKVV  321 (356)
Q Consensus       314 ~~~~g~l~  321 (356)
                      ++++|.+-
T Consensus       137 ~i~~g~iG  144 (344)
T 3euw_A          137 RVANQEIG  144 (344)
T ss_dssp             HHHTTTTS
T ss_pred             HHhcCCCC
Confidence            99998774

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.39  E-value=0.054  Score=46.26  Aligned_cols=94  Identities=13%  Similarity=0.061  Sum_probs=64.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHh
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  232 (356)
                      .+.++.+||=+|  .|.|..+..+++. |++|++++.+++..          +.++ +. . .++.   . +..+.+..+
T Consensus        38 ~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~gvD~s~~~~----------~~a~-~~-~-~~~~---~-d~~~~~~~~   97 (240)
T 3dli_A           38 YFKGCRRVLDIG--CGRGEFLELCKEE-GIESIGVDINEDMI----------KFCE-GK-F-NVVK---S-DAIEYLKSL   97 (240)
T ss_dssp             GTTTCSCEEEET--CTTTHHHHHHHHH-TCCEEEECSCHHHH----------HHHH-TT-S-EEEC---S-CHHHHHHTS
T ss_pred             hhcCCCeEEEEe--CCCCHHHHHHHhC-CCcEEEEECCHHHH----------HHHH-hh-c-ceee---c-cHHHHhhhc
Confidence            357889999998  3456666667665 88999999998887          7777 43 2 2222   1 444434344


Q ss_pred             CCCCccEEEeCC-----C----chHHHHHHHhhccCCeEEEEc
Q 018404          233 FPEGIDIYFEHV-----G----GKMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       233 ~~~~~d~vid~~-----g----~~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ..+.+|+|+...     .    ...+..+.+.|+|+|.++...
T Consensus        98 ~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  140 (240)
T 3dli_A           98 PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES  140 (240)
T ss_dssp             CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred             CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            445899998632     2    136788899999999998653

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.35  E-value=0.04  Score=51.04  Aligned_cols=38  Identities=13%  Similarity=0.003  Sum_probs=34.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++....
T Consensus       190 ~gktvGIIG-lG~IG~~vA~~l~a~G~~V~~~d~~~~~~  227 (393)
T 2nac_A          190 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPE  227 (393)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCH
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEEcCCccch
Confidence            578999999 99999999999999999999999876554

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.33  E-value=0.038  Score=48.41  Aligned_cols=94  Identities=16%  Similarity=0.061  Sum_probs=60.0

Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE
Q 018404          138 GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD  215 (356)
Q Consensus       138 ~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  215 (356)
                      ||+...++..+.+...--.|.+++|.|++..+|..+++++...  |++|++..+....                      
T Consensus       139 PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~----------------------  196 (281)
T 2c2x_A          139 PCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRD----------------------  196 (281)
T ss_dssp             CHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSC----------------------
T ss_pred             CChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhH----------------------
Confidence            4333334444444332346899999997667899999999999  8998877544322                      


Q ss_pred             EEecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          216 AFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       216 vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                               +.+.++     .+|+||.++|...+ ---+.++++..++.+|..
T Consensus       197 ---------L~~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~  234 (281)
T 2c2x_A          197 ---------LPALTR-----QADIVVAAVGVAHL-LTADMVRPGAAVIDVGVS  234 (281)
T ss_dssp             ---------HHHHHT-----TCSEEEECSCCTTC-BCGGGSCTTCEEEECCEE
T ss_pred             ---------HHHHHh-----hCCEEEECCCCCcc-cCHHHcCCCcEEEEccCC
Confidence                     222222     26888888887432 122346788888888764

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.32  E-value=0.11  Score=47.09  Aligned_cols=87  Identities=20%  Similarity=0.255  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...++.++..|.+|++.+++.++           +.+. ++|..  .  .   ++.+.+.+    
T Consensus       149 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~-----------~~~~-~~g~~--~--~---~l~~~l~~----  204 (334)
T 2dbq_A          149 YGKTIGIIG-LGRIGQAIAKRAKGFNMRILYYSRTRKE-----------EVER-ELNAE--F--K---PLEDLLRE----  204 (334)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-----------HHHH-HHCCE--E--C---CHHHHHHH----
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEECCCcch-----------hhHh-hcCcc--c--C---CHHHHHhh----
Confidence            467999999 8999999999999999999999987654           3333 44542  1  1   33334443    


Q ss_pred             CccEEEeCCCch-----HH-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGGK-----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~~-----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|+.++...     .+ ...+..|+++..++.++.
T Consensus       205 -aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          205 -SDFVVLAVPLTRETYHLINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             -CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             -CCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence             67887777652     12 345667777777776653

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.30  E-value=0.59  Score=41.91  Aligned_cols=135  Identities=15%  Similarity=0.178  Sum_probs=79.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEe-CCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      +|.|+| .|.+|...+..++.. ++++++++ +++++.          +.+.+++|..    +.   ++.+.+..   ..
T Consensus         5 ~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~----------~~~~~~~~~~----~~---~~~~~l~~---~~   63 (331)
T 4hkt_A            5 RFGLLG-AGRIGKVHAKAVSGNADARLVAVADAFPAAA----------EAIAGAYGCE----VR---TIDAIEAA---AD   63 (331)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHH----------HHHHHHTTCE----EC---CHHHHHHC---TT
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEECCCHHHH----------HHHHHHhCCC----cC---CHHHHhcC---CC
Confidence            688999 799998877777765 77888655 455554          4444377764    22   45555542   26


Q ss_pred             ccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH-HhhcceeeceeeecchhhHHHHHHHHHHH
Q 018404          237 IDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV-VYKRIRMEGFVVFDYFPQYSRFLDAVLPY  314 (356)
Q Consensus       237 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  314 (356)
                      +|+|+.|+.. .+...+..+|..+-+ |.+..+...+.   ......... -.+++.+    ...+..++...++.+.++
T Consensus        64 ~D~V~i~tp~~~h~~~~~~al~~gk~-v~~EKP~~~~~---~~~~~l~~~a~~~g~~~----~v~~~~r~~p~~~~~~~~  135 (331)
T 4hkt_A           64 IDAVVICTPTDTHADLIERFARAGKA-IFCEKPIDLDA---ERVRACLKVVSDTKAKL----MVGFNRRFDPHFMAVRKA  135 (331)
T ss_dssp             CCEEEECSCGGGHHHHHHHHHHTTCE-EEECSCSCSSH---HHHHHHHHHHHHTTCCE----EECCGGGGCHHHHHHHHH
T ss_pred             CCEEEEeCCchhHHHHHHHHHHcCCc-EEEecCCCCCH---HHHHHHHHHHHHcCCeE----EEcccccCCHHHHHHHHH
Confidence            9999999998 567777777777655 55654311100   000011111 1222222    112233445667888888


Q ss_pred             HHcCCCcc
Q 018404          315 IREGKVVY  322 (356)
Q Consensus       315 ~~~g~l~~  322 (356)
                      +++|.+-.
T Consensus       136 i~~g~iG~  143 (331)
T 4hkt_A          136 IDDGRIGE  143 (331)
T ss_dssp             HHTTTTCS
T ss_pred             HHcCCCCc
Confidence            99987743

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.30  E-value=0.025  Score=48.75  Aligned_cols=106  Identities=13%  Similarity=0.053  Sum_probs=68.4

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcc
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEEN  223 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~  223 (356)
                      .+.....+.++.+||-.| + |.|..+..+++..+.+|++++.++...      +.+.+.+. ..|..   .++..+-. 
T Consensus        37 ~l~~l~~~~~~~~vLDiG-~-G~G~~~~~l~~~~~~~v~~vD~s~~~~------~~a~~~~~-~~~~~~~~~~~~~d~~-  106 (257)
T 3f4k_A           37 AVSFINELTDDAKIADIG-C-GTGGQTLFLADYVKGQITGIDLFPDFI------EIFNENAV-KANCADRVKGITGSMD-  106 (257)
T ss_dssp             HHTTSCCCCTTCEEEEET-C-TTSHHHHHHHHHCCSEEEEEESCHHHH------HHHHHHHH-HTTCTTTEEEEECCTT-
T ss_pred             HHHHHhcCCCCCeEEEeC-C-CCCHHHHHHHHhCCCeEEEEECCHHHH------HHHHHHHH-HcCCCCceEEEECChh-
Confidence            443344678899999998 4 458999999999888999999998876      22222333 34542   12211111 


Q ss_pred             cHHHHHHHhCCCCccEEEeC-----CCc-hHHHHHHHhhccCCeEEEEcc
Q 018404          224 DLDAALKRCFPEGIDIYFEH-----VGG-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid~-----~g~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ++     ....+.+|+|+..     .+. ..+..+.+.|+|+|+++....
T Consensus       107 ~~-----~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  151 (257)
T 3f4k_A          107 NL-----PFQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA  151 (257)
T ss_dssp             SC-----SSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             hC-----CCCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            11     0112379999753     222 467889999999999987653

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=95.29  E-value=0.085  Score=47.28  Aligned_cols=91  Identities=13%  Similarity=0.093  Sum_probs=60.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHH-c-CCEEEEEeCCc-ch-hccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKL-M-GCYVVGSAGSR-EK-VWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~-~-g~~Vi~~~~~~-~~-~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      -+|.|+| +|.+|...+..+.. . ++++++++... ++ .         .+..+ ++|....  + +  ++.+ +.+.+
T Consensus         5 irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~---------~~~a~-~~g~~~~--~-~--~~e~-ll~~~   67 (312)
T 1nvm_B            5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDG---------LARAQ-RMGVTTT--Y-A--GVEG-LIKLP   67 (312)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHH---------HHHHH-HTTCCEE--S-S--HHHH-HHHSG
T ss_pred             CEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhH---------HHHHH-HcCCCcc--c-C--CHHH-HHhcc
Confidence            4799999 89999988887744 3 67777666543 44 2         04445 7776421  1 1  3333 33322


Q ss_pred             CC-CccEEEeCCCc-hHHHHHHHhhcc--CCeEEEE
Q 018404          234 PE-GIDIYFEHVGG-KMLDAVLLNMRL--HGRIAAC  265 (356)
Q Consensus       234 ~~-~~d~vid~~g~-~~~~~~~~~l~~--~G~~v~~  265 (356)
                      .+ ++|+||+|++. .+...+..+++.  |.++++.
T Consensus        68 ~~~~iDvV~~atp~~~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           68 EFADIDFVFDATSASAHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             GGGGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CCCCCcEEEECCChHHHHHHHHHHHHhCCCCEEEEc
Confidence            23 79999999998 567788888887  8887763

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.29  E-value=0.072  Score=47.98  Aligned_cols=88  Identities=9%  Similarity=0.066  Sum_probs=60.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      .|.+|.|+| .|.+|...++.++.+|++|++.++ +.++           +... ++|...    .+  ++.+.+.+   
T Consensus       145 ~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-----------~~~~-~~g~~~----~~--~l~ell~~---  202 (320)
T 1gdh_A          145 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASS-----------SDEA-SYQATF----HD--SLDSLLSV---  202 (320)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCH-----------HHHH-HHTCEE----CS--SHHHHHHH---
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcCh-----------hhhh-hcCcEE----cC--CHHHHHhh---
Confidence            567999999 899999999999999999999998 6654           3333 556521    11  33334433   


Q ss_pred             CCccEEEeCCCc-h----HH-HHHHHhhccCCeEEEEcc
Q 018404          235 EGIDIYFEHVGG-K----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g~-~----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                        .|+|+.++.. +    .+ ...+..|+++..++.++.
T Consensus       203 --aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          203 --SQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             --CSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             --CCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence              6788777664 1    12 345567777777777765

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=95.29  E-value=0.041  Score=48.31  Aligned_cols=93  Identities=14%  Similarity=0.097  Sum_probs=60.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~  235 (356)
                      +.+|||+| +|.+|..+++.+...|.+|++++++.++.               ..+...+ .|..+.+.    +.+...+
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~Dl~d~~~----~~~~~~~   62 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------PAGVQTLIADVTRPDT----LASIVHL   62 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------CTTCCEEECCTTCGGG----CTTGGGG
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------ccCCceEEccCCChHH----HHHhhcC
Confidence            35799999 69999999999999999999999987654               2233322 23333212    2222223


Q ss_pred             CccEEEeCCCch-------------HHHHHHHhhccC--CeEEEEcccc
Q 018404          236 GIDIYFEHVGGK-------------MLDAVLLNMRLH--GRIAACGMIS  269 (356)
Q Consensus       236 ~~d~vid~~g~~-------------~~~~~~~~l~~~--G~~v~~g~~~  269 (356)
                      .+|+||.+.+..             .....++.++..  +++|.+++..
T Consensus        63 ~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~  111 (286)
T 3gpi_A           63 RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTG  111 (286)
T ss_dssp             CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGG
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccE
Confidence            599999998742             234555555544  5888877643

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=95.29  E-value=0.031  Score=47.86  Aligned_cols=99  Identities=15%  Similarity=0.107  Sum_probs=65.0

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhhc---CCCEEEecCCcccHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNKF---GFDDAFNYKEENDLD  226 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~  226 (356)
                      ..++||++||=.|  .|.|..+..+|+..|.  +|++++.+++..          +.+++..   +.-..+..+.. +. 
T Consensus        73 l~ikpG~~VldlG--~G~G~~~~~la~~VG~~G~V~avD~s~~~~----------~~l~~~a~~~~ni~~V~~d~~-~p-  138 (233)
T 4df3_A           73 LPVKEGDRILYLG--IASGTTASHMSDIIGPRGRIYGVEFAPRVM----------RDLLTVVRDRRNIFPILGDAR-FP-  138 (233)
T ss_dssp             CCCCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEECCHHHH----------HHHHHHSTTCTTEEEEESCTT-CG-
T ss_pred             cCCCCCCEEEEec--CcCCHHHHHHHHHhCCCceEEEEeCCHHHH----------HHHHHhhHhhcCeeEEEEecc-Cc-
Confidence            5689999999998  4568889999999875  899999998877          5555232   21111222111 10 


Q ss_pred             HHHHHhCCCCccEEEeCCCc-----hHHHHHHHhhccCCeEEEE
Q 018404          227 AALKRCFPEGIDIYFEHVGG-----KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~  265 (356)
                      +.. ....+.+|+||.....     ..+..+.+.|+|+|+++..
T Consensus       139 ~~~-~~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          139 EKY-RHLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             GGG-TTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccc-ccccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            001 1111368988865543     2567888999999998865

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.28  E-value=0.037  Score=49.39  Aligned_cols=35  Identities=14%  Similarity=0.108  Sum_probs=30.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-Cc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG-SR  191 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~-~~  191 (356)
                      |.+|||+||+|.+|..++..+...|++|+++.+ +.
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~   36 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADP   36 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC-
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCc
Confidence            468999999999999999988889999999887 54

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=95.28  E-value=0.034  Score=47.29  Aligned_cols=99  Identities=12%  Similarity=0.083  Sum_probs=64.0

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCC-C--EEEecCCcccHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-D--DAFNYKEENDLDA  227 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~--~vv~~~~~~~~~~  227 (356)
                      ..+.++++||-.| +|. |..+..+++..| .+|++++.+++..          +.+++.... .  ..+..+-. +.. 
T Consensus        70 ~~~~~~~~VLDlG-cG~-G~~~~~la~~~~~~~v~gvD~s~~~~----------~~a~~~~~~~~~v~~~~~d~~-~~~-  135 (230)
T 1fbn_A           70 MPIKRDSKILYLG-ASA-GTTPSHVADIADKGIVYAIEYAPRIM----------RELLDACAERENIIPILGDAN-KPQ-  135 (230)
T ss_dssp             CCCCTTCEEEEES-CCS-SHHHHHHHHHTTTSEEEEEESCHHHH----------HHHHHHTTTCTTEEEEECCTT-CGG-
T ss_pred             cCCCCCCEEEEEc-ccC-CHHHHHHHHHcCCcEEEEEECCHHHH----------HHHHHHhhcCCCeEEEECCCC-Ccc-
Confidence            4567899999998 554 888999999886 6999999998876          555422211 1  11111111 100 


Q ss_pred             HHHHhCCCCccEEEeCCCch-----HHHHHHHhhccCCeEEEE
Q 018404          228 ALKRCFPEGIDIYFEHVGGK-----MLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~~-----~~~~~~~~l~~~G~~v~~  265 (356)
                      ..... .+.+|+|+......     .+..+.+.|+|+|+++..
T Consensus       136 ~~~~~-~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          136 EYANI-VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             GGTTT-SCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccc-CccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            00011 13699999654432     478888999999999876

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.27  E-value=0.064  Score=47.51  Aligned_cols=89  Identities=10%  Similarity=0.076  Sum_probs=52.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchh-----ccc-------cchhHHHHHHHhhcCCC-EEEecCCc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKV-----WLI-------PMQSQLVELLKNKFGFD-DAFNYKEE  222 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~-----~~~-------~~~~~~~~~~~~~~g~~-~vv~~~~~  222 (356)
                      +.+|+|.| .|++|..+++.+...|. +++.++...-..     ++.       +-.+++++.++ ++..+ .+..+...
T Consensus        36 ~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~-~iNP~v~v~~~~~~  113 (292)
T 3h8v_A           36 TFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLR-NINPDVLFEVHNYN  113 (292)
T ss_dssp             GCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHH-HHCTTSEEEEECCC
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHH-hhCCCcEEEEeccc
Confidence            56999999 89999999999999998 777777543000     000       22345666666 66553 22222210


Q ss_pred             ----ccHHHHHHHh-----CC-CCccEEEeCCCch
Q 018404          223 ----NDLDAALKRC-----FP-EGIDIYFEHVGGK  247 (356)
Q Consensus       223 ----~~~~~~~~~~-----~~-~~~d~vid~~g~~  247 (356)
                          +.+.+.+..+     .. .++|+|+||+.+-
T Consensus       114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~  148 (292)
T 3h8v_A          114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNF  148 (292)
T ss_dssp             TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSH
T ss_pred             CCcHHHHHHHhhhhcccccccCCCCCEEEECCcch
Confidence                0222222111     11 2699999999983

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.27  E-value=0.097  Score=46.32  Aligned_cols=86  Identities=12%  Similarity=0.065  Sum_probs=59.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      +|.|+| .|.+|...+..+...|.+|++.++++++.          +.+. +.|...   ..   +..+.+.+     +|
T Consensus         7 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~----------~~~~-~~g~~~---~~---~~~~~~~~-----~D   63 (299)
T 1vpd_A            7 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAI----------ADVI-AAGAET---AS---TAKAIAEQ-----CD   63 (299)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTCEE---CS---SHHHHHHH-----CS
T ss_pred             eEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHH----------HHHH-HCCCee---cC---CHHHHHhC-----CC
Confidence            799999 89999999988888899999999988887          6666 555421   11   33333432     68


Q ss_pred             EEEeCCCc-hHHHHHH-------HhhccCCeEEEEcc
Q 018404          239 IYFEHVGG-KMLDAVL-------LNMRLHGRIAACGM  267 (356)
Q Consensus       239 ~vid~~g~-~~~~~~~-------~~l~~~G~~v~~g~  267 (356)
                      +||.|+.. ..+...+       ..++++..++.++.
T Consensus        64 ~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~  100 (299)
T 1vpd_A           64 VIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSS  100 (299)
T ss_dssp             EEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             EEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCC
Confidence            88888874 4444444       45566666666543

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=95.26  E-value=0.04  Score=52.20  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=64.9

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLD  226 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~  226 (356)
                      ...+++|++||=.| +| .|..+.++++.++  .+|++++.++.++      +.+.+.++ .+|...  ++..+-. ++ 
T Consensus       254 ~l~~~~g~~VLDlg-aG-~G~~t~~la~~~~~~~~v~a~D~s~~~l------~~~~~~~~-~~g~~~v~~~~~D~~-~~-  322 (450)
T 2yxl_A          254 VLDPKPGETVVDLA-AA-PGGKTTHLAELMKNKGKIYAFDVDKMRM------KRLKDFVK-RMGIKIVKPLVKDAR-KA-  322 (450)
T ss_dssp             HHCCCTTCEEEESS-CT-TCHHHHHHHHHTTTCSEEEEECSCHHHH------HHHHHHHH-HTTCCSEEEECSCTT-CC-
T ss_pred             hcCCCCcCEEEEeC-CC-ccHHHHHHHHHcCCCCEEEEEcCCHHHH------HHHHHHHH-HcCCCcEEEEEcChh-hc-
Confidence            45688999999887 33 3777788888874  6999999998887      22233333 456632  2211111 11 


Q ss_pred             HHHHHhCCCCccEEEe---CCCc--------------------------hHHHHHHHhhccCCeEEEEc
Q 018404          227 AALKRCFPEGIDIYFE---HVGG--------------------------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid---~~g~--------------------------~~~~~~~~~l~~~G~~v~~g  266 (356)
                        ...+..+.+|.|+-   |+|.                          ..+..+++.|+|+|+++...
T Consensus       323 --~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t  389 (450)
T 2yxl_A          323 --PEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT  389 (450)
T ss_dssp             --SSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             --chhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence              00111136999985   5553                          24677888999999998654

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.26  E-value=0.35  Score=43.49  Aligned_cols=138  Identities=13%  Similarity=0.045  Sum_probs=79.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc-CCEEEEEe-CCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM-GCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      -+|.|+| .|.+|...+..++.. ++++++++ ++.++.          +.+.+++|...+.  .   ++.+.+..   .
T Consensus         6 ~~igiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~----------~~~~~~~~~~~~~--~---~~~~ll~~---~   66 (330)
T 3e9m_A            6 IRYGIMS-TAQIVPRFVAGLRESAQAEVRGIASRRLENA----------QKMAKELAIPVAY--G---SYEELCKD---E   66 (330)
T ss_dssp             EEEEECS-CCTTHHHHHHHHHHSSSEEEEEEBCSSSHHH----------HHHHHHTTCCCCB--S---SHHHHHHC---T
T ss_pred             EEEEEEC-chHHHHHHHHHHHhCCCcEEEEEEeCCHHHH----------HHHHHHcCCCcee--C---CHHHHhcC---C
Confidence            3789999 799998877777775 67888665 444554          4444377764222  1   45555542   2


Q ss_pred             CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH-HhhcceeeceeeecchhhHHHHHHHHHH
Q 018404          236 GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV-VYKRIRMEGFVVFDYFPQYSRFLDAVLP  313 (356)
Q Consensus       236 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~  313 (356)
                      .+|+|+.|+.. .....+..+|..+-+ |.+..+-..+.   ......... -.+++.+    ...+..++...++.+.+
T Consensus        67 ~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~EKP~~~~~---~e~~~l~~~a~~~g~~~----~v~~~~r~~p~~~~~k~  138 (330)
T 3e9m_A           67 TIDIIYIPTYNQGHYSAAKLALSQGKP-VLLEKPFTLNA---AEAEELFAIAQEQGVFL----MEAQKSVFLPITQKVKA  138 (330)
T ss_dssp             TCSEEEECCCGGGHHHHHHHHHHTTCC-EEECSSCCSSH---HHHHHHHHHHHHTTCCE----EECCSGGGCHHHHHHHH
T ss_pred             CCCEEEEcCCCHHHHHHHHHHHHCCCe-EEEeCCCCCCH---HHHHHHHHHHHHcCCeE----EEEEhhhhCHHHHHHHH
Confidence            69999999998 567777777777655 44554211100   000011111 1222221    11222334566788888


Q ss_pred             HHHcCCCcc
Q 018404          314 YIREGKVVY  322 (356)
Q Consensus       314 ~~~~g~l~~  322 (356)
                      ++++|.+-.
T Consensus       139 ~i~~g~iG~  147 (330)
T 3e9m_A          139 TIQEGGLGE  147 (330)
T ss_dssp             HHHTTTTCS
T ss_pred             HHhCCCCCC
Confidence            889887743

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=95.25  E-value=0.075  Score=46.07  Aligned_cols=66  Identities=15%  Similarity=0.167  Sum_probs=45.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      +|+|+||+|.+|..+++.+.. |++|++++++.+.           +  .   +  ...|..+.+.+.+.+.+.   ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-----------~--~---~--~~~Dl~~~~~~~~~~~~~---~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI-----------Q--G---G--YKLDLTDFPRLEDFIIKK---RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-----------T--T---C--EECCTTSHHHHHHHHHHH---CCS
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC-----------C--C---C--ceeccCCHHHHHHHHHhc---CCC
Confidence            589999999999999987774 8999999987632           2  1   1  233444432333334332   589


Q ss_pred             EEEeCCCc
Q 018404          239 IYFEHVGG  246 (356)
Q Consensus       239 ~vid~~g~  246 (356)
                      +||.+.|.
T Consensus        60 ~vi~~a~~   67 (273)
T 2ggs_A           60 VIINAAAM   67 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999884

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.24  E-value=0.087  Score=44.72  Aligned_cols=93  Identities=10%  Similarity=0.032  Sum_probs=61.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|||.| +|.+|...++++...|++|++++.....        ++.+.+. +.+.. .+. ..   +.+.  .+  .
T Consensus        30 ~gk~VLVVG-gG~va~~ka~~Ll~~GA~VtVvap~~~~--------~l~~l~~-~~~i~-~i~-~~---~~~~--dL--~   90 (223)
T 3dfz_A           30 KGRSVLVVG-GGTIATRRIKGFLQEGAAITVVAPTVSA--------EINEWEA-KGQLR-VKR-KK---VGEE--DL--L   90 (223)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHGGGCCCEEEECSSCCH--------HHHHHHH-TTSCE-EEC-SC---CCGG--GS--S
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCCH--------HHHHHHH-cCCcE-EEE-CC---CCHh--Hh--C
Confidence            477899999 7999999999999999999999865432        1222222 32332 221 11   1100  01  2


Q ss_pred             CccEEEeCCCchHHHHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ++|+||-+++.+..+.....+++.|..|.+..
T Consensus        91 ~adLVIaAT~d~~~N~~I~~~ak~gi~VNvvD  122 (223)
T 3dfz_A           91 NVFFIVVATNDQAVNKFVKQHIKNDQLVNMAS  122 (223)
T ss_dssp             SCSEEEECCCCTHHHHHHHHHSCTTCEEEC--
T ss_pred             CCCEEEECCCCHHHHHHHHHHHhCCCEEEEeC
Confidence            69999999999877777666666888876644

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.23  E-value=0.03  Score=49.69  Aligned_cols=100  Identities=18%  Similarity=0.169  Sum_probs=57.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~~  235 (356)
                      ..+|+|+||+|.+|...++.+...|.+|++++++..... .|+..+..+.+. ..+...+ .|..+.+.+.+.++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASS-NSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTT-THHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCccccc-CHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHc-----
Confidence            357999999999999999998889999999998743210 000011111222 3344322 24433213333333     


Q ss_pred             CccEEEeCCCch---HHHHHHHhhcc---CCeEE
Q 018404          236 GIDIYFEHVGGK---MLDAVLLNMRL---HGRIA  263 (356)
Q Consensus       236 ~~d~vid~~g~~---~~~~~~~~l~~---~G~~v  263 (356)
                      ++|+||.+.+..   .....++.++.   -++++
T Consensus        77 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           77 NVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             TCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             CCCEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            489999999852   22334444433   24776

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.23  E-value=0.041  Score=47.92  Aligned_cols=100  Identities=16%  Similarity=0.171  Sum_probs=66.5

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCC---EEEecCCcc
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFD---DAFNYKEEN  223 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~---~vv~~~~~~  223 (356)
                      ....+.++.+||-+| + |.|..+..+++..+++|++++.+++..          +.+++   ..|..   .++..+-. 
T Consensus        55 ~~~~~~~~~~vLDiG-c-G~G~~~~~l~~~~~~~v~gvD~s~~~~----------~~a~~~~~~~~~~~~~~~~~~d~~-  121 (273)
T 3bus_A           55 ALLDVRSGDRVLDVG-C-GIGKPAVRLATARDVRVTGISISRPQV----------NQANARATAAGLANRVTFSYADAM-  121 (273)
T ss_dssp             HHSCCCTTCEEEEES-C-TTSHHHHHHHHHSCCEEEEEESCHHHH----------HHHHHHHHHTTCTTTEEEEECCTT-
T ss_pred             HhcCCCCCCEEEEeC-C-CCCHHHHHHHHhcCCEEEEEeCCHHHH----------HHHHHHHHhcCCCcceEEEECccc-
Confidence            456778999999998 3 458888899998899999999998876          44442   33432   22221111 


Q ss_pred             cHHHHHHHhCCCCccEEEeCC-----Cc--hHHHHHHHhhccCCeEEEEcc
Q 018404          224 DLDAALKRCFPEGIDIYFEHV-----GG--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid~~-----g~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ++     ....+.+|+|+...     ..  ..+..+.+.|+|+|+++....
T Consensus       122 ~~-----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~  167 (273)
T 3bus_A          122 DL-----PFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF  167 (273)
T ss_dssp             SC-----CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             cC-----CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            10     11123799998532     22  467888999999999987654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=95.22  E-value=0.04  Score=50.51  Aligned_cols=36  Identities=17%  Similarity=0.254  Sum_probs=32.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .+|||+||+|.+|..+++.+...|++|++++++.+.
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   60 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSS   60 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccc
Confidence            579999999999999999888899999999987553

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.21  E-value=0.031  Score=49.38  Aligned_cols=95  Identities=15%  Similarity=0.134  Sum_probs=62.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc----CC--------CEEEecCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF----GF--------DDAFNYKE  221 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~----g~--------~~vv~~~~  221 (356)
                      .++.+||.+|  +|.|..+..+++. +. +|++++.+++-.          +.+++.+    +.        +.-+....
T Consensus        74 ~~~~~VLdiG--~G~G~~~~~l~~~-~~~~v~~vDid~~~i----------~~ar~~~~~~~~l~~~~~~~~~~~v~~~~  140 (281)
T 1mjf_A           74 PKPKRVLVIG--GGDGGTVREVLQH-DVDEVIMVEIDEDVI----------MVSKDLIKIDNGLLEAMLNGKHEKAKLTI  140 (281)
T ss_dssp             SCCCEEEEEE--CTTSHHHHHHTTS-CCSEEEEEESCHHHH----------HHHHHHTCTTTTHHHHHHTTCCSSEEEEE
T ss_pred             CCCCeEEEEc--CCcCHHHHHHHhC-CCCEEEEEECCHHHH----------HHHHHHHhhccccccccccCCCCcEEEEE
Confidence            4568999998  3456777778877 64 999999998877          6666444    21        11111111


Q ss_pred             cccHHHHHHHhCCCCccEEEeCCC-----------chHHHHHHHhhccCCeEEEE
Q 018404          222 ENDLDAALKRCFPEGIDIYFEHVG-----------GKMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       222 ~~~~~~~~~~~~~~~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  265 (356)
                      . +..+.+..  .+.+|+||-...           ...+..+.+.|+++|.++..
T Consensus       141 ~-D~~~~l~~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          141 G-DGFEFIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             S-CHHHHHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             C-chHHHhcc--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            2 44444444  447999875332           24578899999999999865

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=95.21  E-value=0.043  Score=49.57  Aligned_cols=36  Identities=11%  Similarity=0.118  Sum_probs=30.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSR  191 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~  191 (356)
                      .+.+|||+||+|.+|..+++.+...|  .+|++.++..
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~   60 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALT   60 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccc
Confidence            35689999999999999999888888  6888888764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=95.20  E-value=0.035  Score=49.77  Aligned_cols=72  Identities=15%  Similarity=0.140  Sum_probs=48.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc--CCCE-EEecCCcccHHHHHHHhCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF--GFDD-AFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~-vv~~~~~~~~~~~~~~~~~~  235 (356)
                      +|||+||+|.+|..+++.+...|.+|++++++....          .  . .+  +... ..|..+.+.+.+.+.+   .
T Consensus         3 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~--~-~~~~~~~~~~~D~~~~~~~~~~~~~---~   66 (330)
T 2c20_A            3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGH----------E--D-AITEGAKFYNGDLRDKAFLRDVFTQ---E   66 (330)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC----------G--G-GSCTTSEEEECCTTCHHHHHHHHHH---S
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCc----------h--h-hcCCCcEEEECCCCCHHHHHHHHhh---c
Confidence            799999999999999999988999999999865542          1  1 22  2221 1233332123333332   2


Q ss_pred             CccEEEeCCCc
Q 018404          236 GIDIYFEHVGG  246 (356)
Q Consensus       236 ~~d~vid~~g~  246 (356)
                      ++|+||.+.|.
T Consensus        67 ~~d~vih~a~~   77 (330)
T 2c20_A           67 NIEAVMHFAAD   77 (330)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            69999999884

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.19  E-value=0.23  Score=39.42  Aligned_cols=99  Identities=9%  Similarity=-0.081  Sum_probs=62.5

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc-ccHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE-NDLDA  227 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~  227 (356)
                      ...+.++++||-.| +|. |..+..+++..  +.++++++.++ ..          +     .....++..+-. ....+
T Consensus        17 ~~~~~~~~~vLd~G-~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~----------~-----~~~~~~~~~d~~~~~~~~   78 (180)
T 1ej0_A           17 DKLFKPGMTVVDLG-AAP-GGWSQYVVTQIGGKGRIIACDLLP-MD----------P-----IVGVDFLQGDFRDELVMK   78 (180)
T ss_dssp             HCCCCTTCEEEEES-CTT-CHHHHHHHHHHCTTCEEEEEESSC-CC----------C-----CTTEEEEESCTTSHHHHH
T ss_pred             hCCCCCCCeEEEeC-CCC-CHHHHHHHHHhCCCCeEEEEECcc-cc----------c-----cCcEEEEEcccccchhhh
Confidence            34478899999998 554 88888999886  47999999887 43          1     111122222211 01122


Q ss_pred             HHHH-hCCCCccEEEeC-----CC-------------chHHHHHHHhhccCCeEEEEcc
Q 018404          228 ALKR-CFPEGIDIYFEH-----VG-------------GKMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       228 ~~~~-~~~~~~d~vid~-----~g-------------~~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+.+ ...+.+|+|+..     .+             ...+..+.+.|+++|+++....
T Consensus        79 ~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (180)
T 1ej0_A           79 ALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF  137 (180)
T ss_dssp             HHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            2333 223479999972     22             2456788899999999987543

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.18  E-value=0.12  Score=43.71  Aligned_cols=101  Identities=15%  Similarity=0.169  Sum_probs=63.1

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-CEEEecCCcccHHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DDAFNYKEENDLDAALK  230 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~  230 (356)
                      ..++++++||=.| +|..|..++.+++..+.+|++++.+++..      +.+.+.++ ..+. -.++..+-. .    +.
T Consensus        51 ~~~~~~~~vLDlG-~G~~G~~~~~la~~~~~~v~~vD~s~~~~------~~a~~~~~-~~~~~v~~~~~d~~-~----~~  117 (230)
T 3evz_A           51 TFLRGGEVALEIG-TGHTAMMALMAEKFFNCKVTATEVDEEFF------EYARRNIE-RNNSNVRLVKSNGG-I----IK  117 (230)
T ss_dssp             TTCCSSCEEEEEC-CTTTCHHHHHHHHHHCCEEEEEECCHHHH------HHHHHHHH-HTTCCCEEEECSSC-S----ST
T ss_pred             hhcCCCCEEEEcC-CCHHHHHHHHHHHhcCCEEEEEECCHHHH------HHHHHHHH-HhCCCcEEEeCCch-h----hh
Confidence            3467899999998 55467788888887788999999998876      11222233 3443 223322210 0    11


Q ss_pred             HhCCCCccEEEeCC----------------------C----chHHHHHHHhhccCCeEEEE
Q 018404          231 RCFPEGIDIYFEHV----------------------G----GKMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       231 ~~~~~~~d~vid~~----------------------g----~~~~~~~~~~l~~~G~~v~~  265 (356)
                      ....+.+|+|+-..                      |    ...+..+.+.|+++|+++.+
T Consensus       118 ~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          118 GVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             TTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             hcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            12224799998531                      1    23567777888999998765

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.17  E-value=0.26  Score=44.82  Aligned_cols=136  Identities=11%  Similarity=0.067  Sum_probs=79.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc-CCEEEEEe-CCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM-GCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      -+|.|+| .|.+|...+..++.. ++++++++ +++++.          +.+.+++|...   +.   ++.+.+.+   .
T Consensus         6 ~~vgiiG-~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~----------~~~~~~~g~~~---~~---~~~~~l~~---~   65 (354)
T 3db2_A            6 VGVAAIG-LGRWAYVMADAYTKSEKLKLVTCYSRTEDKR----------EKFGKRYNCAG---DA---TMEALLAR---E   65 (354)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEECSSHHHH----------HHHHHHHTCCC---CS---SHHHHHHC---S
T ss_pred             ceEEEEc-cCHHHHHHHHHHHhCCCcEEEEEECCCHHHH----------HHHHHHcCCCC---cC---CHHHHhcC---C
Confidence            4799999 799998877777766 78877665 444454          44443777642   22   45555542   3


Q ss_pred             CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH-HhhcceeeceeeecchhhHHHHHHHHHH
Q 018404          236 GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV-VYKRIRMEGFVVFDYFPQYSRFLDAVLP  313 (356)
Q Consensus       236 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~  313 (356)
                      .+|+|+.|+.. .+...+..+|..+-+ |.+..+-..+.   ......... -.+++.+    ...+..++...++.+.+
T Consensus        66 ~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~EKP~~~~~---~~~~~l~~~a~~~~~~~----~v~~~~R~~p~~~~~k~  137 (354)
T 3db2_A           66 DVEMVIITVPNDKHAEVIEQCARSGKH-IYVEKPISVSL---DHAQRIDQVIKETGVKF----LCGHSSRRLGALRKMKE  137 (354)
T ss_dssp             SCCEEEECSCTTSHHHHHHHHHHTTCE-EEEESSSCSSH---HHHHHHHHHHHHHCCCE----EEECGGGGSHHHHHHHH
T ss_pred             CCCEEEEeCChHHHHHHHHHHHHcCCE-EEEccCCCCCH---HHHHHHHHHHHHcCCeE----EEeechhcCHHHHHHHH
Confidence            69999999998 577777778877655 55554211100   000011111 1222222    11223344667788888


Q ss_pred             HHHcCCCc
Q 018404          314 YIREGKVV  321 (356)
Q Consensus       314 ~~~~g~l~  321 (356)
                      ++++|.+-
T Consensus       138 ~i~~g~iG  145 (354)
T 3db2_A          138 MIDTKEIG  145 (354)
T ss_dssp             HHHTTTTC
T ss_pred             HHhcCCCC
Confidence            89988774

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=95.16  E-value=0.094  Score=49.24  Aligned_cols=103  Identities=17%  Similarity=0.223  Sum_probs=66.5

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAA  228 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~  228 (356)
                      ....++|++||=.| +| .|..+.++++.++ .+|++++.++.++      +.+.+.++ ..|.. .++..+.. ++...
T Consensus       241 ~l~~~~g~~VLDlg-aG-~G~~t~~la~~~~~~~v~a~D~~~~~l------~~~~~~~~-~~g~~~~~~~~D~~-~~~~~  310 (429)
T 1sqg_A          241 WLAPQNGEHILDLC-AA-PGGKTTHILEVAPEAQVVAVDIDEQRL------SRVYDNLK-RLGMKATVKQGDGR-YPSQW  310 (429)
T ss_dssp             HHCCCTTCEEEEES-CT-TCHHHHHHHHHCTTCEEEEEESSTTTH------HHHHHHHH-HTTCCCEEEECCTT-CTHHH
T ss_pred             HcCCCCcCeEEEEC-CC-chHHHHHHHHHcCCCEEEEECCCHHHH------HHHHHHHH-HcCCCeEEEeCchh-hchhh
Confidence            45678999999887 33 3777788888875 7999999999887      22223333 44653 33332221 22211


Q ss_pred             HHHhCCCCccEEEe---CCCc--------------------------hHHHHHHHhhccCCeEEEEc
Q 018404          229 LKRCFPEGIDIYFE---HVGG--------------------------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       229 ~~~~~~~~~d~vid---~~g~--------------------------~~~~~~~~~l~~~G~~v~~g  266 (356)
                         +.++.+|.|+-   |+|.                          ..+..+++.|+++|+++...
T Consensus       311 ---~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst  374 (429)
T 1sqg_A          311 ---CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT  374 (429)
T ss_dssp             ---HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             ---cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence               22247999986   6553                          23677888999999998654

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.15  E-value=0.62  Score=42.23  Aligned_cols=137  Identities=11%  Similarity=0.052  Sum_probs=78.4

Q ss_pred             CEEEEecCCchHHH-HHHHHHHHc-CCEEEEEe-CCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          158 EYIYVSAASGAVGQ-LVGQFAKLM-GCYVVGSA-GSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~-~ai~la~~~-g~~Vi~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      -+|.|+| .|.+|. ..+..++.. ++++++++ ++.++.          +.+.+++|.... +     ++.+.+..   
T Consensus        28 ~rigiIG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~----------~~~a~~~g~~~~-~-----~~~~ll~~---   87 (350)
T 3rc1_A           28 IRVGVIG-CADIAWRRALPALEAEPLTEVTAIASRRWDRA----------KRFTERFGGEPV-E-----GYPALLER---   87 (350)
T ss_dssp             EEEEEES-CCHHHHHTHHHHHHHCTTEEEEEEEESSHHHH----------HHHHHHHCSEEE-E-----SHHHHHTC---
T ss_pred             eEEEEEc-CcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHH----------HHHHHHcCCCCc-C-----CHHHHhcC---
Confidence            4799999 899997 566666666 78887665 454554          444437787432 1     44444432   


Q ss_pred             CCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH-HhhcceeeceeeecchhhHHHHHHHHH
Q 018404          235 EGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV-VYKRIRMEGFVVFDYFPQYSRFLDAVL  312 (356)
Q Consensus       235 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~  312 (356)
                      ..+|+|+.|+.. .....+..+|..+-+ |.+..+-..+.   ......... -.+++.+    ...+..++...++.+.
T Consensus        88 ~~~D~V~i~tp~~~h~~~~~~al~aGk~-Vl~EKP~a~~~---~ea~~l~~~a~~~g~~~----~v~~~~R~~p~~~~~k  159 (350)
T 3rc1_A           88 DDVDAVYVPLPAVLHAEWIDRALRAGKH-VLAEKPLTTDR---PQAERLFAVARERGLLL----MENFMFLHHPQHRQVA  159 (350)
T ss_dssp             TTCSEEEECCCGGGHHHHHHHHHHTTCE-EEEESSSCSSH---HHHHHHHHHHHHTTCCE----EEECGGGGCTHHHHHH
T ss_pred             CCCCEEEECCCcHHHHHHHHHHHHCCCc-EEEeCCCCCCH---HHHHHHHHHHHHhCCEE----EEEecccCCHHHHHHH
Confidence            269999999998 577777777776655 55654321100   000011111 1222222    1122233345677777


Q ss_pred             HHHHcCCCcc
Q 018404          313 PYIREGKVVY  322 (356)
Q Consensus       313 ~~~~~g~l~~  322 (356)
                      +++++|.+-.
T Consensus       160 ~~i~~G~iG~  169 (350)
T 3rc1_A          160 DMLDEGVIGE  169 (350)
T ss_dssp             HHHHTTTTCS
T ss_pred             HHHhcCCCCC
Confidence            8888887743

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=95.15  E-value=0.052  Score=48.63  Aligned_cols=35  Identities=17%  Similarity=0.228  Sum_probs=31.5

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          156 KGEYIYVSAA--SGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       156 ~g~~VlI~ga--~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      .|.++||+||  ++++|.++++.+...|++|++++++
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            4789999998  8999999999998999999998865

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.15  E-value=0.11  Score=47.31  Aligned_cols=39  Identities=15%  Similarity=0.131  Sum_probs=34.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCcchh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAK-LMGCYVVGSAGSREKV  194 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~-~~g~~Vi~~~~~~~~~  194 (356)
                      -.|.+|.|+| .|.+|...++.++ ..|++|++.+++.++.
T Consensus       161 l~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~  200 (348)
T 2w2k_A          161 PRGHVLGAVG-LGAIQKEIARKAVHGLGMKLVYYDVAPADA  200 (348)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSCCCH
T ss_pred             CCCCEEEEEE-ECHHHHHHHHHHHHhcCCEEEEECCCCcch
Confidence            4578999999 8999999999999 9999999999887664

>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*

Probab=95.14  E-value=0.29  Score=45.00  Aligned_cols=98  Identities=22%  Similarity=0.220  Sum_probs=64.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc-C-CEEEEE-eC-CcchhccccchhHHHHHHHhhcCCCEEEecCCc--ccHHH----
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM-G-CYVVGS-AG-SREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE--NDLDA----  227 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~-g-~~Vi~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~----  227 (356)
                      .+|.|+|++|.+|..++.+.+.. + .+|+++ +. +.++         +.+.++ +++...+...+..  .++.+    
T Consensus         5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~---------l~~~~~-~f~~~~v~v~d~~~~~~l~~~l~~   74 (388)
T 1r0k_A            5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKD---------LADAAK-RTNAKRAVIADPSLYNDLKEALAG   74 (388)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHH---------HHHHHH-HTTCSEEEESCGGGHHHHHHHTTT
T ss_pred             eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHH---------HHHHHH-HcCCcEEEEcChHHHHHHHHHhcc
Confidence            57999998899999999888876 3 677766 33 3333         335566 8888765543321  01111    


Q ss_pred             ----------HHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          228 ----------ALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       228 ----------~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                                .+.+.....+|+|++++++ ..+..++..++.|-++++.
T Consensus        75 ~~~~v~~g~~~~~el~~~~iDvVV~ai~G~aGl~ptlaAi~aGK~VvlA  123 (388)
T 1r0k_A           75 SSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  123 (388)
T ss_dssp             CSSEEEESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             CCcEEEeCccHHHHHHcCCCCEEEEeCCCHHHHHHHHHHHHCCCEEEEe
Confidence                      1112211128999999954 6778888999988888765

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=95.13  E-value=0.28  Score=44.75  Aligned_cols=135  Identities=13%  Similarity=0.142  Sum_probs=79.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc-CCEEEEEeC-CcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      -+|.|+| .|.+|...+..++.. ++++++++. ++++.          +.++ ++|.. +  +.   ++.+.+.+   .
T Consensus         6 ~~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~----------~~a~-~~g~~-~--~~---~~~~ll~~---~   64 (359)
T 3e18_A            6 YQLVIVG-YGGMGSYHVTLASAADNLEVHGVFDILAEKR----------EAAA-QKGLK-I--YE---SYEAVLAD---E   64 (359)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTSTTEEEEEEECSSHHHH----------HHHH-TTTCC-B--CS---CHHHHHHC---T
T ss_pred             CcEEEEC-cCHHHHHHHHHHHhCCCcEEEEEEcCCHHHH----------HHHH-hcCCc-e--eC---CHHHHhcC---C
Confidence            4789999 899998877777776 778887754 44444          5455 67763 2  22   45555542   3


Q ss_pred             CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH-HhhcceeeceeeecchhhHHHHHHHHHH
Q 018404          236 GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV-VYKRIRMEGFVVFDYFPQYSRFLDAVLP  313 (356)
Q Consensus       236 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~  313 (356)
                      .+|+|+.|+.. .....+..+|..+-+ |.+..+-..+.   ......... -.+++.+    ...+..++...++.+.+
T Consensus        65 ~~D~V~i~tp~~~h~~~~~~al~aGkh-Vl~EKP~a~~~---~ea~~l~~~a~~~g~~~----~v~~~~r~~p~~~~~k~  136 (359)
T 3e18_A           65 KVDAVLIATPNDSHKELAISALEAGKH-VVCEKPVTMTS---EDLLAIMDVAKRVNKHF----MVHQNRRWDEDFLIIKE  136 (359)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHHTTCE-EEEESSCCSSH---HHHHHHHHHHHHHTCCE----EEECGGGGCHHHHHHHH
T ss_pred             CCCEEEEcCCcHHHHHHHHHHHHCCCC-EEeeCCCcCCH---HHHHHHHHHHHHhCCeE----EEEeeeccCHHHHHHHH
Confidence            69999999998 677788888886655 45654211100   000111111 1223322    11122334566788888


Q ss_pred             HHHcCCCc
Q 018404          314 YIREGKVV  321 (356)
Q Consensus       314 ~~~~g~l~  321 (356)
                      ++++|.|-
T Consensus       137 ~i~~g~iG  144 (359)
T 3e18_A          137 MFEQKTIG  144 (359)
T ss_dssp             HHHHTTTS
T ss_pred             HHHcCCCC
Confidence            88888774

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=95.13  E-value=0.086  Score=47.46  Aligned_cols=78  Identities=15%  Similarity=0.243  Sum_probs=48.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc-chhccccchhHHHHHHHhhcCCCEEE--ecCCcccHHHHHHHhCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR-EKVWLIPMQSQLVELLKNKFGFDDAF--NYKEENDLDAALKRCFPE  235 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~~~~~~~  235 (356)
                      +|||+||+|.+|..+++.+...|.+|+++++.. ...      .+..+.+. ..+--..+  |..+...+.+.+.+.   
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~~---   72 (347)
T 1orr_A            3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA------TDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY---   72 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH------HHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH---
T ss_pred             EEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCc------hhhhhhhc-cCCceEEEEcCCCCHHHHHHHHhcc---
Confidence            799999999999999998888999999998742 111      00012233 22311222  333321333334331   


Q ss_pred             CccEEEeCCCc
Q 018404          236 GIDIYFEHVGG  246 (356)
Q Consensus       236 ~~d~vid~~g~  246 (356)
                      .+|+||.+.|.
T Consensus        73 ~~d~vih~A~~   83 (347)
T 1orr_A           73 MPDSCFHLAGQ   83 (347)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            58999999984

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=95.12  E-value=0.055  Score=48.88  Aligned_cols=34  Identities=15%  Similarity=0.094  Sum_probs=30.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSR  191 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~  191 (356)
                      .+|||+||+|.+|..+++.+...  |.+|++++++.
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~   40 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT   40 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence            47999999999999999887777  88999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	356
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	2e-33
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	2e-32
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	2e-28
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	1e-27
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	7e-21
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	6e-18
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	6e-18
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	1e-16
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-14
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	2e-14
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-14
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	4e-14
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	7e-14
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-13
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	7e-12
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	1e-11
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	3e-10
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	2e-08
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	3e-07
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	1e-06
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	4e-06
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	1e-05
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	3e-05
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	9e-05
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-04

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  120 bits (301), Expect = 2e-33
 Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 16/196 (8%)

Query: 130 LSYYTGILGMPGMTAWAGFYEICAPKKG--EYIYVSAASGAVGQLVGQFAKLMGCYVVGS 187
           LSY+ G +GMPG+T+  G  E      G  + + VS A+GA G L GQ   L+GC  V  
Sbjct: 2   LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVG 61

Query: 188 AGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK 247
               ++  L                  DA    +  ++   L+   P G+D+YF++VGG 
Sbjct: 62  ICGTQEKCLFLTSEL----------GFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGD 111

Query: 248 MLDAVLLNMRLHGRIAACGMISQYNLS----QPEGVHNLMNVVYKRIRMEGFVVFDYFPQ 303
           + + V+  M  +  I  CG ISQYN       P           + I  E F V +Y  +
Sbjct: 112 ISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDK 171

Query: 304 YSRFLDAVLPYIREGK 319
           +   +  +  + +EGK
Sbjct: 172 FEPGILQLSQWFKEGK 187

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score =  117 bits (294), Expect = 2e-32
 Identities = 84/193 (43%), Positives = 119/193 (61%), Gaps = 13/193 (6%)

Query: 128 VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS 187
           +PLS   G +GMPG+TA+ G  E+C  K GE + VSAA+GAVG +VGQ AKL GC VVG+
Sbjct: 1   LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 60

Query: 188 AGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK 247
           AGS EK+  +               FD AFNYK  N L+ ALK+  P+G D YF++VGG+
Sbjct: 61  AGSDEKIAYLKQIG-----------FDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGE 109

Query: 248 MLDAVLLNMRLHGRIAACGMISQYNLS-QPEGVHNLMNVVYKRIRMEGFVVFDYFP-QYS 305
            L+ VL  M+  G+IA CG IS YN   Q     +  +++YK++R+EGF+V+ +      
Sbjct: 110 FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVRE 169

Query: 306 RFLDAVLPYIREG 318
           + L  ++ ++ EG
Sbjct: 170 KALRDLMKWVLEG 182

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score =  105 bits (264), Expect = 2e-28
 Identities = 33/160 (20%), Positives = 60/160 (37%), Gaps = 16/160 (10%)

Query: 7   VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN 66
           ++  K   LK + +G P ++D  +K   +       +  +L++ L+LS DPYMR      
Sbjct: 1   MVKAKSWTLKKHFQGKPTQSDFELKTVELP---PLKNGEVLLEALFLSVDPYMRIASKR- 56

Query: 67  QDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQG--LFKIH 124
                     G+ + G  VA+VV+S +  F  G +V   +GW  + +        L    
Sbjct: 57  -------LKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEW 109

Query: 125 HTDVPLSYYTGILGMPGMT-AWAGFYEICAPKKGEYIYVS 163
                  +     G   M  A+           G+ +  +
Sbjct: 110 PDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVVTA 147

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  104 bits (261), Expect = 1e-27
 Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 7/164 (4%)

Query: 8   LSNKQVILKN--YVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF 65
           +  ++V+L +     G P   +  V+  S+   + EG   + V+ LYLS DPYMR +M+ 
Sbjct: 3   MIIQRVVLNSRPGKNGNPVAENFRVEEFSLLDALNEGQ--VQVRTLYLSVDPYMRCKMNE 60

Query: 66  NQDPDFSS-FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI- 123
           +   D+ + +      +G G+  V +S H +  KGD V       +   I +  GL K+ 
Sbjct: 61  DTGTDYLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVD 120

Query: 124 -HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAAS 166
               D      T   G+  M               + + +S  S
Sbjct: 121 PQLVDGLKVKETVAKGLENMGVAFQSMMTGGNVGKQIVCISEDS 164

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 87.0 bits (214), Expect = 7e-21
 Identities = 29/193 (15%), Positives = 60/193 (31%), Gaps = 22/193 (11%)

Query: 137 LGMPGMTAWAGFYEICAPKKGEYIYV-SAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW 195
           + +  +TA+           G+  ++ +  + AVG+   Q  KL+    +     R  + 
Sbjct: 9   ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL- 67

Query: 196 LIPMQSQLVELLKNKFGFDDAFNYKEEN-----DLDAALKRCFPEGIDIYFEHVGGKMLD 250
                   V     + G        + N            +       +    VGGK   
Sbjct: 68  ------DEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST 121

Query: 251 AVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYS----R 306
            +   +  +G +   G +S   ++ P         ++K     GF V +           
Sbjct: 122 GIARKLNNNGLMLTYGGMSFQPVTIPT-----SLYIFKNFTSAGFWVTELLKNNKELKTS 176

Query: 307 FLDAVLPYIREGK 319
            L+ ++ +  EGK
Sbjct: 177 TLNQIIAWYEEGK 189

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 78.5 bits (192), Expect = 6e-18
 Identities = 32/184 (17%), Positives = 70/184 (38%), Gaps = 12/184 (6%)

Query: 137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWL 196
            G+  +TAW    E+     GE + + +A+G VG      AK++G  +  +AGS  K  +
Sbjct: 6   FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM 65

Query: 197 IPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNM 256
           +                +   + +  +  D  L+     G+D+    + G+ +   +  +
Sbjct: 66  LSRLG-----------VEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQIL 114

Query: 257 RLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIR 316
              GR    G    Y  +         +  +  + +    +     +Y + L  +L ++ 
Sbjct: 115 APGGRFIELGKKDVYADASLGLAALAKSASFSVVDL-DLNLKLQPARYRQLLQHILQHVA 173

Query: 317 EGKV 320
           +GK+
Sbjct: 174 DGKL 177

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 78.5 bits (192), Expect = 6e-18
 Identities = 34/183 (18%), Positives = 73/183 (39%), Gaps = 14/183 (7%)

Query: 137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWL 196
             + G+T +    +    K  E     AA+G VG +  Q+AK +G  ++G+ G+ +K   
Sbjct: 9   SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68

Query: 197 IPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNM 256
                        K G     NY+EE+ ++   +    + + + ++ VG    +  L  +
Sbjct: 69  A-----------LKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCL 117

Query: 257 RLHGRIAACGMISQYNLSQPEGVHNLM-NVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYI 315
           +  G + + G  S        G+ N   ++   R  ++G++      + +   + +   I
Sbjct: 118 QRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTR--EELTEASNELFSLI 175

Query: 316 REG 318
             G
Sbjct: 176 ASG 178

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 74.5 bits (182), Expect = 1e-16
 Identities = 35/176 (19%), Positives = 57/176 (32%), Gaps = 23/176 (13%)

Query: 136 ILGMPGMTAWAGFY---EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE 192
           I+G  G TA        +     +   I V+ ASG VG         +G  VV  +G   
Sbjct: 8   IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 193 KVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAV 252
               +              G        E  +     K+ +        + VG K+L  V
Sbjct: 68  THEYL-----------KSLGASRVLPRDEFAESRPLEKQVW----AGAIDTVGDKVLAKV 112

Query: 253 LLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFL 308
           L  M   G +AACG+   +          +M  + + +R++G       P+     
Sbjct: 113 LAQMNYGGCVAACGLAGGFT-----LPTTVMPFILRNVRLQGVDSVMTPPERRAQA 163

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 69.2 bits (168), Expect = 1e-14
 Identities = 21/185 (11%), Positives = 49/185 (26%), Gaps = 17/185 (9%)

Query: 136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW 195
           +LG    T +         + G    V    G    ++          ++G   +++K  
Sbjct: 8   LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFA 67

Query: 196 LIPMQSQLVELLKNKFGFDDAFNYKEE-NDLDAALKRCFPEGIDIYFEHVGGKMLDAVLL 254
                         +FG  +  N ++    +   L      G+D  FE +G   +    L
Sbjct: 68  RA-----------KEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAAL 116

Query: 255 NMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 314
                G   +  +    +  +       +         +G     +       +  ++  
Sbjct: 117 EACHKGWGVSVVVGVAASGEEIATRPFQL---VTGRTWKGTAFGGWKSV--ESVPKLVSE 171

Query: 315 IREGK 319
               K
Sbjct: 172 YMSKK 176

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 68.5 bits (166), Expect = 2e-14
 Identities = 30/178 (16%), Positives = 54/178 (30%), Gaps = 21/178 (11%)

Query: 138 GMPGMTAWAGFY---EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV 194
           G  G TA    +   +     +   + V+ A+G VG +        G  VV S G+RE  
Sbjct: 2   GTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 61

Query: 195 WLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLL 254
                                +     E+  D  LK    +      + VGGK L ++L 
Sbjct: 62  -------------DYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLS 108

Query: 255 NMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVL 312
            ++  G +A             E    +   + + + + G             +   +
Sbjct: 109 KIQYGGSVAVS-----GLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERM 161

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 67.7 bits (164), Expect = 3e-14
 Identities = 18/185 (9%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW 195
           ++G    T +    ++    +G    V    G    ++          ++G   +++K  
Sbjct: 8   LIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFA 67

Query: 196 LIPMQSQLVELLKNKFGFDDAFNYKEEND-LDAALKRCFPEGIDIYFEHVGGKMLDAVLL 254
                         + G  +  N ++    +   L      G+D  FE +G        L
Sbjct: 68  KA-----------KEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL 116

Query: 255 NMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 314
           +        +  +         + +     ++      +G +   +  +    +  ++  
Sbjct: 117 SCCQEAYGVSVIV---GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSK--DSVPKLVAD 171

Query: 315 IREGK 319
               K
Sbjct: 172 FMAKK 176

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 67.2 bits (163), Expect = 4e-14
 Identities = 37/193 (19%), Positives = 67/193 (34%), Gaps = 20/193 (10%)

Query: 128 VPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS 187
           VP+    G LG    T                     A GAVG      AK+ G  ++ +
Sbjct: 1   VPIEL-LGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIA 58

Query: 188 AGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK 247
               E    +            + G     N K + D  AA+K     G++   E  G  
Sbjct: 59  VDIVESRLELAK----------QLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSP 107

Query: 248 -MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSR 306
            +L   +  + + G+IA  G       +Q     ++ +++     + G V     P+  +
Sbjct: 108 EILKQGVDALGILGKIAVVGAPQLGTTAQ----FDVNDLLLGGKTILGVVEGSGSPK--K 161

Query: 307 FLDAVLPYIREGK 319
           F+  ++   ++GK
Sbjct: 162 FIPELVRLYQQGK 174

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (162), Expect = 7e-14
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 19/183 (10%)

Query: 137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWL 196
           +G+P  TA+         K GE + V  ASG VG    Q A+  G  ++G+AG+ E   +
Sbjct: 9   IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 68

Query: 197 IPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNM 256
           +              G  + FN++E N +D   K    +GIDI  E +    L   L  +
Sbjct: 69  VLQ-----------NGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLL 117

Query: 257 RLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFP-QYSRFLDAVLPYI 315
              GR+   G      +       N  + + K   + G  +F     ++ ++  A+   +
Sbjct: 118 SHGGRVIVVGSRGTIEI-------NPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGM 170

Query: 316 REG 318
             G
Sbjct: 171 EIG 173

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 65.4 bits (158), Expect = 2e-13
 Identities = 23/185 (12%), Positives = 47/185 (25%), Gaps = 18/185 (9%)

Query: 136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW 195
           +LG    T +         + G    V          V          ++    + +K  
Sbjct: 8   LLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFE 67

Query: 196 LIPMQSQLVELLKNKFGFDDAFNYKEENDL-DAALKRCFPEGIDIYFEHVGGKMLDAVLL 254
                          FG  D  N  + ++     L +    G+D   E VG   +    L
Sbjct: 68  KA-----------KVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNAL 116

Query: 255 NMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 314
              L G   +  +              L+         +G +   +  +    +  ++  
Sbjct: 117 ESCLKGWGVSVLVGWTDLHDVATRPIQLI----AGRTWKGSMFGGFKGK--DGVPKMVKA 170

Query: 315 IREGK 319
             + K
Sbjct: 171 YLDKK 175

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 61.1 bits (147), Expect = 7e-12
 Identities = 28/177 (15%), Positives = 49/177 (27%), Gaps = 13/177 (7%)

Query: 136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW 195
           +    G TA+  F E      G+ + +  A G +G      A+ +G   V          
Sbjct: 8   MAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL 66

Query: 196 LIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLL 254
            +  +              +      E    A +      G D   E  G  + L     
Sbjct: 67  KLAEEIGADL-------TLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSE 119

Query: 255 NMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAV 311
            +R  G  +  G+        P        +V K    +G  V D    + + +   
Sbjct: 120 LLRRGGFYSVAGVAVP---QDPVPFKVYEWLVLKNATFKGIWVSDT-SHFVKTVSIT 172

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 60.3 bits (145), Expect = 1e-11
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 21/180 (11%)

Query: 136 ILGMPGMTAWAGFY---EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE 192
            +G  G TA    +   E     +   + V+ A+G VG L        G  V  S G   
Sbjct: 8   AIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA 67

Query: 193 KVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAV 252
           +                            E+ +   ++    +      + VGG+ L  V
Sbjct: 68  EHD-------------YLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATV 114

Query: 253 LLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVL 312
           L  MR  G +A  G+     +        +   + + + + G             +   L
Sbjct: 115 LSRMRYGGAVAVSGLTGGAEVP-----TTVHPFILRGVSLLGIDSVYCPMDLRLRIWERL 169

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 56.5 bits (135), Expect = 3e-10
 Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 24/184 (13%)

Query: 137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWL 196
           L   G+TA+    +                G +G +  Q  K+M               +
Sbjct: 12  LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-----------TV 60

Query: 197 IPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNM 256
           I +  +  +L   +    D       + +   ++     G+++  + VG +        +
Sbjct: 61  IALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYL 120

Query: 257 -RLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYI 315
               GR+   G   +            + V+   +  EG +V +Y       L  ++   
Sbjct: 121 LGRMGRLIIVGYGGELR-------FPTIRVISSEVSFEGSLVGNY-----VELHELVTLA 168

Query: 316 REGK 319
            +GK
Sbjct: 169 LQGK 172

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 48.8 bits (116), Expect = 2e-08
 Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 3/62 (4%)

Query: 136 ILGMPGMTAWAGFYEI---CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE 192
           I+G  G TA      +       +   I V+ ASG VG         +G  VV  +G   
Sbjct: 8   IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 193 KV 194
             
Sbjct: 68  TH 69

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 47.9 bits (113), Expect = 3e-07
 Identities = 25/186 (13%), Positives = 50/186 (26%), Gaps = 20/186 (10%)

Query: 136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW 195
           ++G    T +           G    V    G VG       K  G   +   G+ +  +
Sbjct: 7   LIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF 65

Query: 196 LIPMQSQLVELLKNKFGFDDAFNYKEEND-LDAALKRCFPEGIDIYFEHVGGKMLDAVLL 254
                         + G  +  N K+ +  +   +      G+D   E  G        L
Sbjct: 66  ----------PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNAL 115

Query: 255 NMRLHGRIAACGMISQYNLSQPEGVHNLMNV-VYKRIRMEGFVVFDYFPQYSRFLDAVLP 313
                      G+     L+ P     L  + +     ++G V   +       +  ++ 
Sbjct: 116 QSTY----CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKG---EEVSRLVD 168

Query: 314 YIREGK 319
              + K
Sbjct: 169 DYMKKK 174

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 45.8 bits (107), Expect = 1e-06
 Identities = 23/185 (12%), Positives = 50/185 (27%), Gaps = 26/185 (14%)

Query: 137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWL 196
             +  +TA+         + GE + V                           + +    
Sbjct: 9   FPVSFLTAYLALKR-AQARPGEKVLV-----------------QAAAGALGTAAVQVARA 50

Query: 197 IPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNM 256
           + ++         K     A   +E        +R    G       V GK ++  L  +
Sbjct: 51  MGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLL 110

Query: 257 RLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYS---RFLDAVLP 313
              GR+   G         P      + ++ + + + GF +     + +     L  +LP
Sbjct: 111 AHGGRLVYIGAAEGEVAPIPP-----LRLMRRNLAVLGFWLTPLLREGALVEEALGFLLP 165

Query: 314 YIREG 318
            +   
Sbjct: 166 RLGRE 170

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 44.5 bits (104), Expect = 4e-06
 Identities = 34/177 (19%), Positives = 56/177 (31%), Gaps = 15/177 (8%)

Query: 137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWL 196
           +     T + G  E+   + G  + V      VG +    AKL G   +   GSR     
Sbjct: 9   ITDMMTTGFHGA-ELADIEMGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRPICVE 66

Query: 197 IPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKM-LDAVLLN 255
                         +G  D  NYK  +  D  +K    +G+D      GG   L   +  
Sbjct: 67  AAKF----------YGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKM 116

Query: 256 MRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVL 312
           ++  G I+        +      V     + +K I+           +  R  D V+
Sbjct: 117 VKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE--RLRDMVV 171

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 42.6 bits (99), Expect = 1e-05
 Identities = 18/185 (9%), Positives = 45/185 (24%), Gaps = 19/185 (10%)

Query: 136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW 195
           ++G    + +           G    V          +          ++    + EK  
Sbjct: 8   LIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFP 67

Query: 196 LIPMQSQLVELLKNKFGFDDAFNYKEEND-LDAALKRCFPEGIDIYFEHVGGKMLDAVLL 254
                           G  D  N +E +  +   +      G+D   +  G        +
Sbjct: 68  KA-----------KALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAV 116

Query: 255 NMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 314
           +  + G  +   + ++ +      V  ++          G+   D  P         +  
Sbjct: 117 DCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNL-------VSD 169

Query: 315 IREGK 319
            +  K
Sbjct: 170 YKNKK 174

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 42.1 bits (98), Expect = 3e-05
 Identities = 30/173 (17%), Positives = 52/173 (30%), Gaps = 31/173 (17%)

Query: 136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW 195
            L     T + G         G  +YV+ A G VG      A+L+G  V           
Sbjct: 6   CLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAV----------V 53

Query: 196 LIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG--------- 246
           ++   +          GF+ A    +    +          +D   + VG          
Sbjct: 54  IVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEG 113

Query: 247 -------KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRM 292
                   +L++++   R+ G+I   G+   Y    P  V     +    IR 
Sbjct: 114 AKHEAPATVLNSLMQVTRVAGKIGIPGL---YVTEDPGAVDAAAKIGSLSIRF 163

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 40.5 bits (93), Expect = 9e-05
 Identities = 17/185 (9%), Positives = 45/185 (24%), Gaps = 25/185 (13%)

Query: 7   VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEE------GSNAILVKNLYLSCDPYMR 60
           +++ + V+   +  G PK+         +  +  E        N ++VK L    +P   
Sbjct: 1   MITAQAVLYTQH--GEPKDV--------LFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDI 50

Query: 61  -------ARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSL 113
                             ++              +    +    +       +     + 
Sbjct: 51  NQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTW 110

Query: 114 IKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAP-KKGEYIYVS-AASGAVGQ 171
             +  G           +         G+T       +    K    +Y    A+   G+
Sbjct: 111 RTHALGNDDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGK 170

Query: 172 LVGQF 176
            +  +
Sbjct: 171 QLITY 175

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 24/172 (13%), Positives = 45/172 (26%), Gaps = 14/172 (8%)

Query: 136 ILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVW 195
           ++G    T +    +    K G    V    G VG  V    K  G   +      +  +
Sbjct: 9   LIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF 67

Query: 196 LIPMQSQLVELLKNKFGFDDAFNYKEENDLDA---ALKRCFPEGIDIYFEHVGGKMLDAV 252
              M            G  +  + K+     +   +       G           M+DA+
Sbjct: 68  EKAMA----------VGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDAL 117

Query: 253 LLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY 304
                 +G     G+     +   + +       +K     G    D  P+ 
Sbjct: 118 ASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKL 169

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	356
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.96
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.96
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.95
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.94
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.94
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.94
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.93
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.93
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.92
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.92
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.92
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.92
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.92
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.92
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.92
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.92
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.91
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.91
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.91
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.9
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.9
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.9
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.9
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.9
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.9
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.9
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.9
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.9
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.9
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.89
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.89
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.89
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.89
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.88
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.88
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.88
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.87
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.87
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.87
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.86
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.86
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.86
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.86
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.85
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.83
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.49
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.25
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.19
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.18
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.17
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.17
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.16
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.14
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.13
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.12
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.08
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.08
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.07
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.06
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.06
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.05
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.02
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.01
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.97
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.97
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.96
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.96
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.96
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.95
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.95
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.91
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.9
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.9
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.9
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.89
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.87
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.87
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.86
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.82
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.82
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.81
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.8
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.8
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.79
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.76
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.74
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.74
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.73
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.73
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.71
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.71
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.67
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.66
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.65
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.64
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.64
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.63
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.62
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.59
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.55
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.54
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.5
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.49
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.44
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.43
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.4
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	97.33
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.31
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.23
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.22
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.19
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.19
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.12
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.11
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.08
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.06
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.93
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.92
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.89
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.83
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	96.8
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.79
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.78
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.72
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.71
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	96.71
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.68
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.67
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.63
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.63
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.57
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.57
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.48
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.48
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.46
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.45
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.43
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.43
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.37
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.35
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.33
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.32
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.22
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	96.09
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.05
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.01
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.95
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.95
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.92
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.9
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.81
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.8
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.73
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	95.64
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.58
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.57
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.48
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.45
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.43
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.41
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	95.38
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	95.24
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.22
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.22
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.04
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.98
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	94.96
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	94.95
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	94.87
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.77
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	94.7
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	94.55
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	94.47
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.46
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	94.45
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	94.44
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.41
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	94.4
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.31
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.3
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	94.29
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	94.29
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	94.21
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.2
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	94.14
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.09
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.09
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.08
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.05
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	94.05
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.03
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.97
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.93
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.92
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.92
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.84
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.75
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.74
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	93.68
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.42
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	93.39
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	93.34
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.32
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.19
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.11
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.07
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.95
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	92.85
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	92.77
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	92.71
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	92.7
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	92.66
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	92.63
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	92.62
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.62
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.6
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.58
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.56
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.45
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.39
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	92.3
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.2
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.17
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.13
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.02
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	91.98
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	91.95
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	91.94
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	91.8
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.76
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.72
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.68
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	91.65
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.64
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.61
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.59
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.55
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.38
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	91.37
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.3
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.28
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	91.2
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.16
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	91.15
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	91.08
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	90.74
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.56
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	90.55
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.48
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	90.36
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	90.25
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	90.22
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	90.21
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.21
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.18
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.1
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.01
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	89.7
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	89.41
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.17
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.03
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.94
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.87
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.75
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	88.74
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	88.66
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	88.6
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	88.58
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	88.57
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	88.56
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	88.51
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	88.39
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	88.33
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	88.15
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	88.07
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	88.05
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	87.95
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	87.63
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	87.62
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	87.58
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	87.58
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	87.55
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.32
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.3
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	87.05
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	87.01
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	86.97
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	86.95
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	86.92
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	86.72
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	86.7
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	86.66
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	86.57
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	86.55
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	85.98
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	85.95
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	85.78
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	85.54
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	85.52
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	85.5
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	85.2
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	85.12
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	85.05
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	84.58
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	84.42
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	83.91
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	83.78
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	83.57
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	83.5
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	83.38
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	83.36
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	83.03
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	82.9
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	82.63
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	82.38
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	82.26
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	82.14
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	81.76
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	81.6
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.57
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	81.41
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	81.39
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.22
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	81.2
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.04
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	80.91
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	80.9
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	80.81
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	80.73
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	80.67
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.24
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	80.16
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	80.03

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.96  E-value=2.9e-29  Score=210.03  Aligned_cols=177  Identities=45%  Similarity=0.761  Sum_probs=152.7

Q ss_pred             ccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh
Q 018404          130 LSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN  209 (356)
Q Consensus       130 ~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~  209 (356)
                      ++...+++.++++|||++|.+.+++++||+|||+||+|++|++++|+||.+|++||++++++++.          +.++ 
T Consensus         3 ~~~~l~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~----------~~~~-   71 (182)
T d1v3va2           3 LSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI----------AYLK-   71 (182)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHH-
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH----------HHHH-
Confidence            44345788899999999999999999999999999999999999999999999999999999998          9999 


Q ss_pred             hcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCC-CccccchHHHHh
Q 018404          210 KFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQ-PEGVHNLMNVVY  287 (356)
Q Consensus       210 ~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~  287 (356)
                      ++|++++++++++ ++.+.+.+.+.+ ++|+||||+|++.++.++++|+++|+++.+|..+.++... .....++..++.
T Consensus        72 ~~Ga~~vi~~~~~-~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~  150 (182)
T d1v3va2          72 QIGFDAAFNYKTV-NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIY  150 (182)
T ss_dssp             HTTCSEEEETTSC-SCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHH
T ss_pred             hhhhhhhcccccc-cHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhh
Confidence            9999999999887 767776666655 9999999999999999999999999999999866543322 223456678899


Q ss_pred             hcceeeceeeecc-hhhHHHHHHHHHHHHHcC
Q 018404          288 KRIRMEGFVVFDY-FPQYSRFLDAVLPYIREG  318 (356)
Q Consensus       288 ~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~g  318 (356)
                      |++++.|++..++ ++...+.++++++++++|
T Consensus       151 k~~ti~g~~~~~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         151 KQLRIEGFIVYRWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             TTCEEEECCGGGCCHHHHHHHHHHHHHHHHTT
T ss_pred             cCcEEEEEEEeccChHHHHHHHHHHHHHHhCc
Confidence            9999999988887 445667899999999886

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=2.8e-29  Score=210.40  Aligned_cols=174  Identities=20%  Similarity=0.326  Sum_probs=152.6

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      ++|+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+.+|++|+++++++++.          +.++ ++|
T Consensus         2 eAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~----------~~l~-~~G   70 (183)
T d1pqwa_           2 EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR----------EMLS-RLG   70 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH----------HHHH-TTC
T ss_pred             chhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccc----------cccc-ccc
Confidence            68899999999999998888999999999999999999999999999999999999999988          9999 999


Q ss_pred             CCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcce
Q 018404          213 FDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIR  291 (356)
Q Consensus       213 ~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  291 (356)
                      ++++++++++ ++.+.+++.+++ ++|++|||+|++.++.++++|+++|+++.+|..+..+.     ......++.++++
T Consensus        71 a~~vi~~~~~-~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~-----~~~~~~~~~~~~~  144 (183)
T d1pqwa_          71 VEYVGDSRSV-DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYAD-----ASLGLAALAKSAS  144 (183)
T ss_dssp             CSEEEETTCS-THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTT-----CEEEGGGGTTTCE
T ss_pred             ccccccCCcc-CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCC-----cccchHHHhCCcE
Confidence            9999999887 999999999988 99999999999999999999999999999997654321     1223334568888


Q ss_pred             eeceeeecc----hhhHHHHHHHHHHHHHcCCCccc
Q 018404          292 MEGFVVFDY----FPQYSRFLDAVLPYIREGKVVYV  323 (356)
Q Consensus       292 ~~~~~~~~~----~~~~~~~l~~~~~~~~~g~l~~~  323 (356)
                      +.++....+    +....+.++++.+++++|+++|.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         145 FSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             EEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             EEEEEccceeccCHHHHHHHHHHHHHHHHCCCCcee
Confidence            888765543    45567889999999999999974

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.3e-28  Score=196.54  Aligned_cols=144  Identities=19%  Similarity=0.286  Sum_probs=126.1

Q ss_pred             cccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCCCCCCCCCCCCCcceecEEEE
Q 018404            9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQDPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus         9 ~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~~~~~~p~v~G~e~~~~G~V~   87 (356)
                      .|||++++++  |+|+  +++++. ++|.| .+++|||+|||.+++||++|++.++ .+.....+|.++|||+  +|+|+
T Consensus         2 ~MkAv~~~~~--G~p~--~l~~~~-~~~~P-~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~--~G~V~   73 (150)
T d1yb5a1           2 LMRAVRVFEF--GGPE--VLKLRS-DIAVP-IPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDV--AGVIE   73 (150)
T ss_dssp             EEEEEEESSC--SSGG--GEEEEE-EEECC-CCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCE--EEEEE
T ss_pred             ceeEEEEEcc--CCcc--eEEEEe-ecCCC-CCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccce--eeeeE
Confidence            4899999998  8884  666643 45666 7899999999999999999999887 4445567889999995  89999


Q ss_pred             EecCCCCCCCCCCEEEEc----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEe
Q 018404           88 VVDSGHPEFKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVS  163 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~  163 (356)
                      ++|+++++|++||+|++.    |+|+||+++++++ ++++ |++++.. ++|+++..++|||+++...+...+|+++||+
T Consensus        74 ~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~-~~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          74 AVGDNASAFKKGDRVFTSSTISGGYAEYALAADHT-VYKL-PEKLKPV-IGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             EECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGG-EEEC-CTTCCCC-EEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             eecceeeccccCccccccccccccccccccccccc-cccc-cCCCCHH-HHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            999999999999999987    7999999999999 9999 9996655 6888999999999999888999999999984

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.6e-28  Score=201.77  Aligned_cols=163  Identities=25%  Similarity=0.340  Sum_probs=142.1

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      ++|+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+.+|++|+++++++++.          +.++ ++|
T Consensus         5 ~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~----------~~~~-~~G   73 (174)
T d1yb5a2           5 QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ----------KIVL-QNG   73 (174)
T ss_dssp             HHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHH-HTT
T ss_pred             HHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccc----------cccc-ccC
Confidence            68899999999999998888999999999999999999999999999999999999999888          8999 999


Q ss_pred             CCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcce
Q 018404          213 FDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIR  291 (356)
Q Consensus       213 ~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  291 (356)
                      +++++|+++. ++.+.+++.+++ ++|++|||+|++.++.++++++++|+++.+|..+.       .+.++..++.|+++
T Consensus        74 a~~vi~~~~~-~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-------~~~~~~~~~~k~~~  145 (174)
T d1yb5a2          74 AHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESS  145 (174)
T ss_dssp             CSEEEETTST-THHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCE
T ss_pred             cccccccccc-cHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCC-------CCCCHHHHHHCCCE
Confidence            9999999987 999999999988 99999999999999999999999999999986432       33566778899999


Q ss_pred             eeceeeecchhhHHHHHHHHHHHHHc
Q 018404          292 MEGFVVFDYFPQYSRFLDAVLPYIRE  317 (356)
Q Consensus       292 ~~~~~~~~~~~~~~~~l~~~~~~~~~  317 (356)
                      +.|+.+...   ..++++++.+++++
T Consensus       146 i~g~~~~~~---~~~~~~~~~~~l~~  168 (174)
T d1yb5a2         146 IIGVTLFSS---TKEEFQQYAAALQA  168 (174)
T ss_dssp             EEECCGGGC---CHHHHHHHHHHHHH
T ss_pred             EEEEEecCC---CHHHHHHHHHHHHH
Confidence            999876543   13445555555543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.5e-27  Score=200.27  Aligned_cols=179  Identities=37%  Similarity=0.652  Sum_probs=145.1

Q ss_pred             ccchhcccCcchHHHHHHHHHHcCCCCC--CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHH
Q 018404          130 LSYYTGILGMPGMTAWAGFYEICAPKKG--EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVEL  206 (356)
Q Consensus       130 ~~~~~a~l~~~~~tA~~~l~~~~~~~~g--~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~  206 (356)
                      +++...+++++++|||++|...+++++|  ++|||+||+|++|++++|+||.+|+ +|+++++++++.          ..
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~----------~~   71 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKC----------LF   71 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHH----------HH
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHH----------hh
Confidence            5556667899999999999999999988  8999999999999999999999999 566667777665          54


Q ss_pred             HHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCc----cccch
Q 018404          207 LKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPE----GVHNL  282 (356)
Q Consensus       207 ~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~  282 (356)
                      +..++|+++++|++++ ++.+.+++.++.|+|+|||++|++.+..++++|+++|+++.+|..+++....+.    .....
T Consensus        72 l~~~~gad~vi~~~~~-~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~  150 (187)
T d1vj1a2          72 LTSELGFDAAVNYKTG-NVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVE  150 (187)
T ss_dssp             HHHHSCCSEEEETTSS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHH
T ss_pred             hhhcccceEEeeccch-hHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHH
Confidence            5438999999999997 999999999877999999999999999999999999999999986653322111    11223


Q ss_pred             HHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          283 MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      ..+..|++++.++...++.+.+.+.++++.+++++|+
T Consensus       151 ~~~~~k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         151 AIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             HHHHHTTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             HHHHhcceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            4566789999999888887778899999999999986

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=4e-27  Score=196.39  Aligned_cols=169  Identities=22%  Similarity=0.277  Sum_probs=141.5

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      ++|+++++++|||++|.+.+++++||+|+|+||+|++|++++|+|+.+|++|+++++++++.          +.++ ++|
T Consensus         5 ~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~----------~~~~-~lG   73 (179)
T d1qora2           5 QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA----------QSAL-KAG   73 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH----------HHHH-HHT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHH----------HHHH-hcC
Confidence            68999999999999998888999999999999999999999999999999999999999998          9999 999


Q ss_pred             CCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhh-cc
Q 018404          213 FDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYK-RI  290 (356)
Q Consensus       213 ~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~  290 (356)
                      +++++|++++ ++.+++++.|++ ++|++||++|++.+..++++++++|+++.+|.....+.     ..+...+..+ .+
T Consensus        74 a~~vi~~~~~-d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~  147 (179)
T d1qora2          74 AWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVT-----GVNLGILNQKGSL  147 (179)
T ss_dssp             CSEEEETTTS-CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCCC-----CBCTHHHHHTTSC
T ss_pred             CeEEEECCCC-CHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCcc-----ccchhhhhccceE
Confidence            9999999987 999999999988 99999999999999999999999999999988655422     2233333333 33


Q ss_pred             eeeceeeecc---hhhHHHHHHHHHHHHHcC
Q 018404          291 RMEGFVVFDY---FPQYSRFLDAVLPYIREG  318 (356)
Q Consensus       291 ~~~~~~~~~~---~~~~~~~l~~~~~~~~~g  318 (356)
                      .+....+..+   ++...+.++++++++++|
T Consensus       148 ~~~~~~l~~~~~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         148 YVTRPSLQGYITTREELTEASNELFSLIASG  178 (179)
T ss_dssp             EEECCCHHHHCCSHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeeEEeeecCCHHHHHHHHHHHHHHHHCc
Confidence            3333322222   445567788899999887

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=5.2e-27  Score=193.74  Aligned_cols=170  Identities=19%  Similarity=0.240  Sum_probs=135.0

Q ss_pred             ccchhcccCcchHHHHHHHH---HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHH
Q 018404          130 LSYYTGILGMPGMTAWAGFY---EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVEL  206 (356)
Q Consensus       130 ~~~~~a~l~~~~~tA~~~l~---~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~  206 (356)
                      +. ++|+++++++|||+++.   +.+...+|++|||+||+|+||.+++|+|+.+|++|+++++++++.          +.
T Consensus         3 ~~-eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~----------~~   71 (176)
T d1xa0a2           3 LK-EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH----------DY   71 (176)
T ss_dssp             HH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH----------HH
T ss_pred             HH-HHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH----------HH
Confidence            44 79999999999997654   457888999999999999999999999999999999999999998          99


Q ss_pred             HHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH
Q 018404          207 LKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV  286 (356)
Q Consensus       207 ~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  286 (356)
                      ++ ++|+++++|+++  .+.+.++...++++|+|||++|++.+..++++|+++|+++.+|...+.     ..+.+...++
T Consensus        72 ~~-~lGa~~vi~~~~--~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~-----~~~~~~~~~~  143 (176)
T d1xa0a2          72 LR-VLGAKEVLARED--VMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFI  143 (176)
T ss_dssp             HH-HTTCSEEEECC-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHH
T ss_pred             HH-hcccceeeecch--hHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCc-----ccCCCHHHHH
Confidence            99 999999999875  444555544445999999999999999999999999999999986543     3456788899


Q ss_pred             hhcceeeceeeecchhhHHHHHHHHHHHHHcCCCcc
Q 018404          287 YKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVY  322 (356)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~~  322 (356)
                      .|++++.|+.....+   .+...++.+.+. |.++|
T Consensus       144 ~k~~~i~Gv~~~~~~---~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         144 LRGVSLLGIDSVYCP---MDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             HTTCEEEECCSSSCC---HHHHHHHHHHHH-TTTCC
T ss_pred             HCCcEEEEEeCCcCC---HHHHHHHHHHHh-cccCC
Confidence            999999997543321   344455555553 77765

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=2.2e-26  Score=190.97  Aligned_cols=143  Identities=17%  Similarity=0.110  Sum_probs=120.4

Q ss_pred             cccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCCCCCCCCCCCCCcceec
Q 018404            5 SEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQDPDFSSFTPGSPIEGF   83 (356)
Q Consensus         5 ~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~~~~~~p~v~G~e~~~~   83 (356)
                      |+|.+|||++++++  |+|    ++++  ++|.| .++++||+|||.+++||++|++.++ .+.....+|.++|||+  +
T Consensus         1 ~~P~tMkA~v~~~~--g~p----l~l~--evp~P-~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~--~   69 (175)
T d1llua1           1 TLPQTMKAAVVHAY--GAP----LRIE--EVKVP-LPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEG--V   69 (175)
T ss_dssp             CCCSEEEEEEBCST--TSC----CEEE--EEECC-CCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCE--E
T ss_pred             CcchhcEEEEEEeC--CCC----CEEE--EeECC-CCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcc--e
Confidence            47899999999998  877    5665  55556 7899999999999999999999888 3444567899999995  9


Q ss_pred             EEEEEecCCCCCCCCCCEEEEc-------------------------------cccceeEeecCCCcceeecCCCCCccc
Q 018404           84 GVAKVVDSGHPEFKKGDLVWGT-------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSY  132 (356)
Q Consensus        84 G~V~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~  132 (356)
                      |+|+++|++++++++||||+..                               |+|+||+++++++ ++++ |++++.. 
T Consensus        70 G~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~-~~~i-Pd~l~~~-  146 (175)
T d1llua1          70 GYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNY-VGIL-PKNVKAT-  146 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTT-SEEC-CTTCCCC-
T ss_pred             EEEEEeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHH-EEEC-CCCCChh-
Confidence            9999999999999999999742                               5899999999999 9999 9996554 


Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEe
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVS  163 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~  163 (356)
                      .++++..++.|+++.++ .+ ..+|++|||+
T Consensus       147 ~a~~~~~~~~t~~~~~~-~g-~~~G~~VLVl  175 (175)
T d1llua1         147 IHPGKLDDINQILDQMR-AG-QIEGRIVLEM  175 (175)
T ss_dssp             EEEECGGGHHHHHHHHH-TT-CCSSEEEEEC
T ss_pred             HHHHHHhHHHHHHHHHH-hC-CCCCCEEEeC
Confidence            46667788999998883 34 4579999985

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=8e-26  Score=187.39  Aligned_cols=168  Identities=20%  Similarity=0.235  Sum_probs=146.5

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      .++.++|++.|||+++.+.+++++|++|+|+| +|++|++++|+++.+|+ +|++++++++++          +.++ ++
T Consensus         5 ~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G-~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~----------~~a~-~~   72 (174)
T d1f8fa2           5 LLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDIVESRL----------ELAK-QL   72 (174)
T ss_dssp             GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHH----------HHHH-HH
T ss_pred             HHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeC-CCHHHhhhhhcccccccceeeeeccHHHHH----------HHHH-Hc
Confidence            58889999999999998889999999999999 59999999999999999 667778888888          8999 99


Q ss_pred             CCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcc
Q 018404          212 GFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRI  290 (356)
Q Consensus       212 g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  290 (356)
                      |+++++|++++ ++.+++++++++++|+||||+|+ ..+..++++++++|+++.+|.....    .....+...++.+++
T Consensus        73 Ga~~~i~~~~~-~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~----~~~~~~~~~~~~k~~  147 (174)
T d1f8fa2          73 GATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG----TTAQFDVNDLLLGGK  147 (174)
T ss_dssp             TCSEEEETTTS-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT----CCCCCCHHHHHHTTC
T ss_pred             CCeEEEeCCCc-CHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCC----cccccCHHHHHHCCC
Confidence            99999999887 89999999998899999999998 6889999999999999999864321    123467788899999


Q ss_pred             eeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          291 RMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       291 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      ++.|+...++.  ..++++++++++++|+
T Consensus       148 ~i~Gs~~g~~~--~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         148 TILGVVEGSGS--PKKFIPELVRLYQQGK  174 (174)
T ss_dssp             EEEECSGGGSC--HHHHHHHHHHHHHTTS
T ss_pred             EEEEEEecCCC--hHHHHHHHHHHHHcCC
Confidence            99998766542  2577999999999985

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.94  E-value=4.1e-26  Score=191.74  Aligned_cols=175  Identities=17%  Similarity=0.281  Sum_probs=143.7

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEe-cCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVS-AASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~-ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      ++|+++++++|||++|.+.+++++|++|+|+ ||+|++|++++|+||.+|++||+++++.++.      ++..+.++ ++
T Consensus         5 ~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~------~~~~~~~~-~l   77 (189)
T d1gu7a2           5 QGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL------DEVVASLK-EL   77 (189)
T ss_dssp             HHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH------HHHHHHHH-HH
T ss_pred             HHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc------chHHhhhh-hc
Confidence            6999999999999999988999999988775 7899999999999999999999999876654      22225667 89


Q ss_pred             CCCEEEecCCc--ccHHHHHHHhC---CCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH
Q 018404          212 GFDDAFNYKEE--NDLDAALKRCF---PEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV  286 (356)
Q Consensus       212 g~~~vv~~~~~--~~~~~~~~~~~---~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  286 (356)
                      |+++++++++.  .++.+.+++.+   ++++|++|||+|++.+..++++|+++|+++.+|..++.     ....+...++
T Consensus        78 Gad~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~l~  152 (189)
T d1gu7a2          78 GATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYI  152 (189)
T ss_dssp             TCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHH
T ss_pred             cccEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCC-----CccCcHHHHH
Confidence            99999988542  14455555543   34899999999999999999999999999999986553     2345677788


Q ss_pred             hhcceeeceeeecc----hhhHHHHHHHHHHHHHcCC
Q 018404          287 YKRIRMEGFVVFDY----FPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       287 ~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~g~  319 (356)
                      .|++++.|+++..+    ++...+.++++++++++|+
T Consensus       153 ~k~~~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         153 FKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             HSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             HCCcEEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99999999987665    4455678899999999885

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.94  E-value=3.7e-26  Score=193.23  Aligned_cols=146  Identities=16%  Similarity=0.132  Sum_probs=127.4

Q ss_pred             CcccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceec
Q 018404            4 NSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGF   83 (356)
Q Consensus         4 ~~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~   83 (356)
                      ...++++||+++.++  ++|    |++++  ++.| +|+++||+|||.++|||++|++.+.+......+|.++|||+  +
T Consensus         3 ~~~~~~~kAav~~~~--~~p----l~i~e--v~~P-~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~--~   71 (199)
T d1cdoa1           3 VGKVIKCKAAVAWEA--NKP----LVIEE--IEVD-VPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEG--A   71 (199)
T ss_dssp             TTSCEEEEEEEBCST--TSC----CEEEE--EEEC-CCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCE--E
T ss_pred             CCCceEEEEEEEecC--CCC----cEEEE--EECC-CCCCCEEEEEEEEEEEecchhhhhhhccccccccccccccc--c
Confidence            346789999999997  777    56754  5555 78999999999999999999998886555667899999995  8


Q ss_pred             EEEEEecCCCCCCCCCCEEEEc---------------------------------------------------cccceeE
Q 018404           84 GVAKVVDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYS  112 (356)
Q Consensus        84 G~V~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~  112 (356)
                      |+|+++|++++++++||||+..                                                   |+|+||+
T Consensus        72 G~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~  151 (199)
T d1cdoa1          72 GIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYT  151 (199)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEE
T ss_pred             eEEEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEE
Confidence            9999999999999999999653                                                   6899999


Q ss_pred             eecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEe
Q 018404          113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVS  163 (356)
Q Consensus       113 ~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~  163 (356)
                      ++++.. +++| |+++++. +++++.+++.|+++++......+.|++|||+
T Consensus       152 ~v~~~~-~~~i-P~~~~~~-~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         152 VVNQIA-VAKI-DPSVKLD-EFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             EEEGGG-EEEC-CTTSCCG-GGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             EEchHH-EEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999 9999 9997665 6889999999999999888889999999985

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=3.1e-26  Score=184.38  Aligned_cols=140  Identities=14%  Similarity=0.102  Sum_probs=118.7

Q ss_pred             cEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEec
Q 018404           11 KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVD   90 (356)
Q Consensus        11 ~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~vG   90 (356)
                      +.+.++++  |+|+  .|+++  +++.| .++++||+|||.+++||++|++++++.......|.++|||+  +|+|+++|
T Consensus         2 ~~i~~~~~--G~pe--~l~~~--e~~~P-~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~--~G~V~~vG   72 (147)
T d1qora1           2 TRIEFHKH--GGPE--VLQAV--EFTPA-DPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEA--AGIVSKVG   72 (147)
T ss_dssp             EEEEBSSC--CSGG--GCEEE--ECCCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCE--EEEEEEEC
T ss_pred             eEEEEccc--CCCc--eeEEE--EecCC-CCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeecccc--ccceeeee
Confidence            46788888  9884  66665  56666 78999999999999999999998885555667889999995  99999999


Q ss_pred             CCCCCCCCCCEEEEc----cccceeEeecCCCcceeecCCCCCccc-hhcccCcchHHHHHHHHHHcCCCCCCEEEE
Q 018404           91 SGHPEFKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHTDVPLSY-YTGILGMPGMTAWAGFYEICAPKKGEYIYV  162 (356)
Q Consensus        91 ~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~~~~~~~-~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI  162 (356)
                      +++++|++||+|+..    |+|+||++++.+. ++++ |++++++. ++++++....|+++++.+ .++++|++|||
T Consensus        73 ~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~-~~~~-P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1          73 SGVKHIKAGDRVVYAQSALGAYSSVHNIIADK-AAIL-PAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             TTCCSCCTTCEEEESCCSSCCSBSEEEEEGGG-EEEC-CTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             eecccccccceeeeeccccccceeEEEEehHH-eEEc-CcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            999999999999854    7999999999999 9999 99976664 355677888888888855 68999999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=4.3e-26  Score=184.56  Aligned_cols=142  Identities=18%  Similarity=0.202  Sum_probs=119.8

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCCCCCCCCCCCCCcceecEE
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      |.+|||+++.++  |++.    .+...+++.| ++++|||||||.++|||++|++.+. .+.....+|+++|+|+  +|+
T Consensus         1 m~~~KA~v~~~~--~~~~----~~~i~~v~~P-~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~--~G~   71 (152)
T d1xa0a1           1 MSAFQAFVVNKT--ETEF----TAGVQTISMD-DLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDL--AGV   71 (152)
T ss_dssp             CCEEEEEEEEEE--TTEE----EEEEEEEEGG-GSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEE--EEE
T ss_pred             CCceEEEEEEec--CCce----EEEEEEccCC-CCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeee--eee
Confidence            358999999998  7773    4445677777 8899999999999999999988777 4445567899999985  888


Q ss_pred             EEEecCCCCCCCCCCEEEEc---------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCC
Q 018404           86 AKVVDSGHPEFKKGDLVWGT---------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKK  156 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~  156 (356)
                      |++  .++..+++||+|++.         |+|+||+++++++ ++++ |++  ++.++|+++++++|||.++...++++ 
T Consensus        72 v~~--~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~-~~~i-P~~--l~~~aa~l~~a~~ta~~~~~~~~~~~-  144 (152)
T d1xa0a1          72 VVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW-LVPL-PKG--LERIAQEISLAELPQALKRILRGELR-  144 (152)
T ss_dssp             EEE--CCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGG-CEEC-CTT--HHHHEEEEEGGGHHHHHHHHHHTCCC-
T ss_pred             eec--cCCCccccCCEEEEecCccccccCCCcceeeeehhhc-cccC-CCC--CCHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence            887  556789999999875         7899999999999 9999 999  55568889999999999988888876 


Q ss_pred             CCEEEEec
Q 018404          157 GEYIYVSA  164 (356)
Q Consensus       157 g~~VlI~g  164 (356)
                      |++|||+|
T Consensus       145 G~tVL~l~  152 (152)
T d1xa0a1         145 GRTVVRLA  152 (152)
T ss_dssp             SEEEEECC
T ss_pred             CCEEEEcC
Confidence            99999986

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.93  E-value=1.7e-26  Score=192.16  Aligned_cols=130  Identities=13%  Similarity=0.050  Sum_probs=111.3

Q ss_pred             EEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc---CCCCCCCCCCCCCcceecEEEEEecCCCCCCCCCCEEEEc-
Q 018404           30 VKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF---NQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT-  105 (356)
Q Consensus        30 ~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~---~~~~~~~p~v~G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~-  105 (356)
                      ++..++|.| +++++|||||+.+++||++|++.+.+   ......+|.++|||+  +|+|+++|+++++|++||+|+.. 
T Consensus        13 l~~~e~~~P-~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~--~G~Vv~vG~~v~~~~~GdrV~~~~   89 (178)
T d1e3ja1          13 LRLEQRPIP-EPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEA--SGTVVKVGKNVKHLKKGDRVAVEP   89 (178)
T ss_dssp             EEEEECCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEE--EEEEEEECTTCCSCCTTCEEEECC
T ss_pred             EEEEEeECC-CCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeecccc--ceEEEecCcccCCCCCCCEEEECc
Confidence            444567777 88999999999999999999987762   233445689999995  99999999999999999999742 


Q ss_pred             ------------------------------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCC
Q 018404          106 ------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPK  155 (356)
Q Consensus       106 ------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~  155 (356)
                                                    |+|+||+++++++ ++++ |+++++. +++++++++.|||+++. .++++
T Consensus        90 ~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~a~~-~~~~~  165 (178)
T d1e3ja1          90 GVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF-CHKL-PDNCNVK-QLVTHSFKLEQTVDAFE-AARKK  165 (178)
T ss_dssp             EECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTCCCG-GGEEEEEEGGGHHHHHH-HHHHC
T ss_pred             ccccCCccccccCCccccccccceeccccccccceeeeecccc-eeeC-CCCCCHH-HHHHHHhHHHHHHHHHH-HhCCC
Confidence                                          6899999999998 9999 9996555 68888899999999985 57899


Q ss_pred             CCCEEEEecCC
Q 018404          156 KGEYIYVSAAS  166 (356)
Q Consensus       156 ~g~~VlI~ga~  166 (356)
                      +|++|+|+||+
T Consensus       166 ~g~~VlVig~C  176 (178)
T d1e3ja1         166 ADNTIKVMISC  176 (178)
T ss_dssp             CTTCSEEEEEC
T ss_pred             CCCEEEEEccc
Confidence            99999999965

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.93  E-value=5e-26  Score=191.85  Aligned_cols=144  Identities=15%  Similarity=0.125  Sum_probs=125.0

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      .+++|||++++++  |+|    |++  .++|.| +|+++||||||.++|||++|++.+++......+|.++|||+  +|+
T Consensus         3 ~~~~~kAav~~~~--g~~----l~i--~evp~P-~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~--~G~   71 (197)
T d2fzwa1           3 EVIKCKAAVAWEA--GKP----LSI--EEIEVA-PPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLG--AGI   71 (197)
T ss_dssp             CCEEEEEEEBCST--TSC----CEE--EEEEEC-CCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEE--EEE
T ss_pred             CceEEEEEEEccC--CCC----CEE--EEEECC-CCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcce--eeE
Confidence            5678999999998  887    566  466666 88999999999999999999999996556667899999995  899


Q ss_pred             EEEecCCCCCCCCCCEEEEc---------------------------------------------------cccceeEee
Q 018404           86 AKVVDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYSLI  114 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v  114 (356)
                      |+++|++|+.+++||+|...                                                   |+|+||+++
T Consensus        72 V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vv  151 (197)
T d2fzwa1          72 VESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV  151 (197)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEE
T ss_pred             EEeecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEe
Confidence            99999999999999999742                                                   689999999


Q ss_pred             cCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEe
Q 018404          115 KNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVS  163 (356)
Q Consensus       115 ~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~  163 (356)
                      ++.+ ++++ |+++++. +++++++++.|++.++.....-+.+++|||+
T Consensus       152 p~~~-~~~v-p~~l~~~-~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         152 ADIS-VAKI-DPLIKVD-EFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             EGGG-EEEC-CTTSCSG-GGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             chHH-EEEC-CCCCCHH-HHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9998 9999 8997665 6888999999999999776666788999884

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=3.4e-26  Score=189.01  Aligned_cols=157  Identities=23%  Similarity=0.332  Sum_probs=125.2

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      ++|+++++++|||++|.+ +++++|++|+|+||+|++|++++|+||.+|++|++++++++++          +.++ ++|
T Consensus         5 eAA~l~~~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~----------~~~~-~lG   72 (171)
T d1iz0a2           5 EAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL----------ALPL-ALG   72 (171)
T ss_dssp             HHHTSHHHHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS----------HHHH-HTT
T ss_pred             HHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccc----------cccc-ccc
Confidence            688899999999999965 8999999999999999999999999999999999999999998          9999 999


Q ss_pred             CCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcce
Q 018404          213 FDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIR  291 (356)
Q Consensus       213 ~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  291 (356)
                      +++++|+.+   ..   .+.+.+ |+|+||||+| +.+..++++++++|+++.+|..++.     ..+.+...++.|+++
T Consensus        73 a~~~i~~~~---~~---~~~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~-----~~~~~~~~~~~k~~~  140 (171)
T d1iz0a2          73 AEEAATYAE---VP---ERAKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLA  140 (171)
T ss_dssp             CSEEEEGGG---HH---HHHHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCE
T ss_pred             cceeeehhh---hh---hhhhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCC-----CCCccHHHHHHCCcE
Confidence            999998864   22   233334 8999999988 6789999999999999999976543     233566778899999


Q ss_pred             eeceeeecchhhHHHHHHHHHHH
Q 018404          292 MEGFVVFDYFPQYSRFLDAVLPY  314 (356)
Q Consensus       292 ~~~~~~~~~~~~~~~~l~~~~~~  314 (356)
                      +.|+++..+.+ ..+.+++.+..
T Consensus       141 i~g~~~~~~~~-~~~~~~~~~~~  162 (171)
T d1iz0a2         141 VLGFWLTPLLR-EGALVEEALGF  162 (171)
T ss_dssp             EEECCHHHHTT-CHHHHHHHHHH
T ss_pred             EEEEeCcChhh-hHHHHHHHHHH
Confidence            99998766522 23344444433

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=2.6e-25  Score=183.62  Aligned_cols=163  Identities=20%  Similarity=0.247  Sum_probs=146.4

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      ++|+++++++|||+++. ..++++|++|+|+|++|++|++++|+++.+|+ +|++++++++++          +.++ ++
T Consensus         5 eAA~l~c~~~Ta~~al~-~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~----------~~~~-~~   72 (170)
T d1jvba2           5 EAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV----------EAAK-RA   72 (170)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH----------HHHH-HH
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhH----------HHHH-Hc
Confidence            78999999999999995 58899999999999999999999999999996 999999999998          9999 99


Q ss_pred             CCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhc
Q 018404          212 GFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR  289 (356)
Q Consensus       212 g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  289 (356)
                      |++++++++++ ++.+.+++.+.+ ++|++|||+|+ ..++.++++++++|+++.+|..+.      ....+...++.|+
T Consensus        73 Ga~~~i~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~  145 (170)
T d1jvba2          73 GADYVINASMQ-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA------DLHYHAPLITLSE  145 (170)
T ss_dssp             TCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC------CCCCCHHHHHHHT
T ss_pred             CCceeeccCCc-CHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccC------ccccCHHHHHhCC
Confidence            99999999887 888899888877 89999999999 678999999999999999997432      2345677889999


Q ss_pred             ceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          290 IRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      +++.|++..+     +++++++++++++|+
T Consensus       146 i~i~Gs~~~~-----~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         146 IQFVGSLVGN-----QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             CEEEECCSCC-----HHHHHHHHHHHHTTS
T ss_pred             cEEEEEecCC-----HHHHHHHHHHHHcCC
Confidence            9999998876     788999999999986

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.92  E-value=4.7e-28  Score=201.34  Aligned_cols=158  Identities=16%  Similarity=0.141  Sum_probs=133.4

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC----------CCCCCCCCC
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ----------DPDFSSFTP   76 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~----------~~~~~p~v~   76 (356)
                      |.+|||++++++  |+|. +.++++..++|.| +++++||+|||++++||++|++.+++..          ....+|.++
T Consensus         1 m~t~kA~v~~~~--G~p~-~~l~l~~~~~p~p-~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~   76 (175)
T d1gu7a1           1 MITAQAVLYTQH--GEPK-DVLFTQSFEIDDD-NLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPC   76 (175)
T ss_dssp             CEEEEEEEESSC--SCHH-HHCEEEEEEECTT-SCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEEC
T ss_pred             CceeEEEEEccC--CCcc-cccEEEEEECCCC-CCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccc
Confidence            458999999998  8886 6688888899988 8899999999999999999999876221          123567899


Q ss_pred             CCcceecEEEEEecCCCCCCCCCCEEEEc----cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHH-H
Q 018404           77 GSPIEGFGVAKVVDSGHPEFKKGDLVWGT----TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYE-I  151 (356)
Q Consensus        77 G~e~~~~G~V~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~-~  151 (356)
                      |+|.  +|+|++.|.++..++.||+|+..    |+|+||+++++++ ++++ |++  ++ ..++++..++|||+++.. .
T Consensus        77 G~e~--~g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~-~~~i-P~~--~~-~~~a~~~~~~ta~~~l~~~~  149 (175)
T d1gu7a1          77 GNEG--LFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD-FIKL-PNP--AQ-SKANGKPNGLTDAKSIETLY  149 (175)
T ss_dssp             CSCC--EEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGG-EEEE-CCH--HH-HHHTTCSCCCCCCCCEEEEC
T ss_pred             cccc--ccccccccccccccccccceeccccccccccceeeehhhh-ccCC-Ccc--ch-hhhhccchHHHHHHHHHHHh
Confidence            9885  89999999999999999999865    7999999999999 9999 997  65 444556788899998754 3


Q ss_pred             cCCCCCCEEEEec-CCchHHHHHHH
Q 018404          152 CAPKKGEYIYVSA-ASGAVGQLVGQ  175 (356)
Q Consensus       152 ~~~~~g~~VlI~g-a~g~vG~~ai~  175 (356)
                      .++++|++|||+| |+|++|.+++|
T Consensus       150 ~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         150 DGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             CSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             cCCCCCCEEEEECccchhhhheEEe
Confidence            6799999999998 55889998776

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.92  E-value=1.5e-24  Score=179.25  Aligned_cols=161  Identities=20%  Similarity=0.292  Sum_probs=140.4

Q ss_pred             hhcccCcchHHHHHHHHHHc-CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhh
Q 018404          133 YTGILGMPGMTAWAGFYEIC-APKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNK  210 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~-~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~  210 (356)
                      ++|+++++++|||+++.+.. .+++|++|+|+| +|++|++++|+++.+|+ +|++++++++++          +.++ +
T Consensus         8 eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~----------~~~~-~   75 (172)
T d1h2ba2           8 EMAPLADAGITAYRAVKKAARTLYPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKL----------KLAE-R   75 (172)
T ss_dssp             HTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHH----------HHHH-H
T ss_pred             HHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHH----------HHHh-h
Confidence            68899999999999998765 489999999998 69999999999999997 788888888888          9999 9


Q ss_pred             cCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhh
Q 018404          211 FGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYK  288 (356)
Q Consensus       211 ~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  288 (356)
                      +|+++++++++  +..+.+.+.+.+ ++|++|||+|+ ..++.++++++++|+++.+|...       ..+.+...++.|
T Consensus        76 ~ga~~~i~~~~--~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-------~~~~~~~~l~~k  146 (172)
T d1h2ba2          76 LGADHVVDARR--DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-------ELRFPTIRVISS  146 (172)
T ss_dssp             TTCSEEEETTS--CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-------CCCCCHHHHHHT
T ss_pred             cccceeecCcc--cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-------cccCCHHHHHhC
Confidence            99999999887  455566677777 99999999999 57999999999999999999632       134567788999


Q ss_pred             cceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          289 RIRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      ++++.|+...+     .++++++++++++|+
T Consensus       147 ~~~i~Gs~~~~-----~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         147 EVSFEGSLVGN-----YVELHELVTLALQGK  172 (172)
T ss_dssp             TCEEEECCSCC-----HHHHHHHHHHHHTTS
T ss_pred             CcEEEEEEecC-----HHHHHHHHHHHHcCC
Confidence            99999998877     677999999999986

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=5.9e-25  Score=181.63  Aligned_cols=137  Identities=15%  Similarity=0.114  Sum_probs=113.8

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||++++++  |+|    |++  .++|.| +++++||+|||+++|||++|++.++ .+.....+|.++|||+  +|+|++
T Consensus         1 MkA~v~~~~--g~p----l~i--~~v~~P-~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~--~G~Vv~   69 (171)
T d1rjwa1           1 MKAAVVEQF--KEP----LKI--KEVEKP-TISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEG--VGIVEE   69 (171)
T ss_dssp             CEEEEBSST--TSC----CEE--EECCCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCE--EEEEEE
T ss_pred             CeEEEEecC--CCC----cEE--EEeECC-CCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEE--EEEEEE
Confidence            799999998  777    566  467777 8899999999999999999999887 4556677899999995  999999


Q ss_pred             ecCCCCCCCCCCEEEEc-------------------------------cccceeEeecCCCcceeecCCCCCccchhccc
Q 018404           89 VDSGHPEFKKGDLVWGT-------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGIL  137 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l  137 (356)
                      +|++++++++||+|+..                               |+|+||+++++++ ++++ |+++++  ++|++
T Consensus        70 vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~--e~A~l  145 (171)
T d1rjwa1          70 VGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY-VVKI-PDNTII--EVQPL  145 (171)
T ss_dssp             ECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-CEEC-CTTCCE--EEEEG
T ss_pred             ecccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHH-EEEC-CCCCCH--HHHHH
Confidence            99999999999999731                               6899999999998 9999 999544  55566


Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEEec
Q 018404          138 GMPGMTAWAGFYEICAPKKGEYIYVSA  164 (356)
Q Consensus       138 ~~~~~tA~~~l~~~~~~~~g~~VlI~g  164 (356)
                      . ...++++.+. .+.+ +|++|||+|
T Consensus       146 ~-~~~~~~~~~~-~~~~-~G~tVlViG  169 (171)
T d1rjwa1         146 E-KINEVFDRML-KGQI-NGRVVLTLE  169 (171)
T ss_dssp             G-GHHHHHHHHH-TTCC-SSEEEEECC
T ss_pred             H-HHHHHHHHHH-hcCC-CCCEEEEeC
Confidence            3 4567777764 3555 599999998

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.92  E-value=2.7e-25  Score=188.58  Aligned_cols=143  Identities=16%  Similarity=0.224  Sum_probs=120.3

Q ss_pred             CcccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceec
Q 018404            4 NSEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGF   83 (356)
Q Consensus         4 ~~~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~   83 (356)
                      +..+++|||+++.++  |+|    |+++  ++|.| +|+++||||||.++|||++|++.+++.. ...+|.++|||+  +
T Consensus         3 ~~~~~~~KAaV~~~~--g~p----l~i~--evp~P-~p~~geVlVkv~a~gic~sD~~~~~G~~-~~~~P~v~GHE~--~   70 (202)
T d1e3ia1           3 QGKVIKCKAAIAWKT--GSP----LCIE--EIEVS-PPKACEVRIQVIATCVCPTDINATDPKK-KALFPVVLGHEC--A   70 (202)
T ss_dssp             TTSCEEEEEEEBCST--TSC----CEEE--EEEEC-CCCTTEEEEEEEEEECCHHHHHTTCTTS-CCCSSBCCCCEE--E
T ss_pred             CCCeEEEEEEEEccC--CCC----CEEE--EEECC-CCCCCEEEEEEEEEEEeccccceeeeec-cccccccccccc--c
Confidence            457889999999998  777    5665  55556 7899999999999999999999887433 456689999996  8


Q ss_pred             EEEEEecCCCCCCCCCCEEEEc-------------------------------------------------------ccc
Q 018404           84 GVAKVVDSGHPEFKKGDLVWGT-------------------------------------------------------TGW  108 (356)
Q Consensus        84 G~V~~vG~~v~~~~~Gd~V~~~-------------------------------------------------------g~~  108 (356)
                      |+|+++|++|+++++||+|++.                                                       |+|
T Consensus        71 G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~f  150 (202)
T d1e3ia1          71 GIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSF  150 (202)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCS
T ss_pred             eEEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCc
Confidence            9999999999999999999752                                                       679


Q ss_pred             ceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEec
Q 018404          109 EEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSA  164 (356)
Q Consensus       109 ~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~g  164 (356)
                      +||+++++.. ++++ |+++++. .++++.+++.++++++..   +++|++|.|..
T Consensus       151 aey~~v~~~~-l~~l-P~~~~~~-~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~  200 (202)
T d1e3ia1         151 SQYTVVSEAN-LARV-DDEFDLD-LLVTHALPFESINDAIDL---MKEGKSIRTIL  200 (202)
T ss_dssp             BSEEEEEGGG-EEEC-CTTSCGG-GGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred             eEEEEEehhh-EEEC-CCCCCHH-HHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence            9999999998 9999 9997665 577888899999998854   46899887764

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=1.5e-24  Score=181.01  Aligned_cols=164  Identities=20%  Similarity=0.247  Sum_probs=138.4

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      .+|++.|++.|||+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|++++++++++          +.++ ++
T Consensus         5 ~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~G-aG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~----------~~a~-~l   72 (182)
T d1vj0a2           5 VLAMAMCSGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRL----------KLAE-EI   72 (182)
T ss_dssp             HHHHHTTHHHHHHHHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHH----------HHHH-HT
T ss_pred             HHHHhhcHHHHHHHHHHHHhCCCCCCEEEEEC-CCccchhheecccccccccccccccccccc----------cccc-cc
Confidence            47888999999999998888999999999999 59999999999999998 899999999998          9999 99


Q ss_pred             CCCEEEecCCcccH---HHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccc-hHHH
Q 018404          212 GFDDAFNYKEENDL---DAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHN-LMNV  285 (356)
Q Consensus       212 g~~~vv~~~~~~~~---~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~  285 (356)
                      |+++++|+.+. ++   .+.+.+.+.+ |+|+||||+|+ ..++.++++++++|+++.+|.....    ...+.+ ...+
T Consensus        73 Ga~~vi~~~~~-~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~l  147 (182)
T d1vj0a2          73 GADLTLNRRET-SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQ----DPVPFKVYEWL  147 (182)
T ss_dssp             TCSEEEETTTS-CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCC----CCEEECHHHHT
T ss_pred             cceEEEecccc-chHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCC----CccccccHHHH
Confidence            99999999875 44   4457777877 99999999998 6889999999999999999964321    122233 3346


Q ss_pred             HhhcceeeceeeecchhhHHHHHHHHHHHHHcC
Q 018404          286 VYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREG  318 (356)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g  318 (356)
                      +.|++++.|++..+     .+++++++++++++
T Consensus       148 ~~k~l~i~G~~~~~-----~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         148 VLKNATFKGIWVSD-----TSHFVKTVSITSRN  175 (182)
T ss_dssp             TTTTCEEEECCCCC-----HHHHHHHHHHHHTC
T ss_pred             HHCCcEEEEEEeCC-----HHHHHHHHHHHHHC
Confidence            78999999998876     66788888888765

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.92  E-value=3.2e-25  Score=182.87  Aligned_cols=137  Identities=16%  Similarity=0.093  Sum_probs=114.8

Q ss_pred             cEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCC---CCCCCCCCCCCcceecEEEE
Q 018404           11 KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQ---DPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus        11 ~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~---~~~~~p~v~G~e~~~~G~V~   87 (356)
                      ||+++.++  |+|    |++  .+++.|..++++||+||+.+++||++|++.+.+..   ....+|.++|||+  +|+|+
T Consensus         1 kA~~~~~~--g~p----l~i--~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~--~G~V~   70 (171)
T d1h2ba1           1 KAARLHEY--NKP----LRI--EDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHEN--VGYIE   70 (171)
T ss_dssp             CEEEESST--TSC----CEE--ECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCE--EEEEE
T ss_pred             CEEEEEeC--CCC----CEE--EEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceee--eeeee
Confidence            78999998  888    566  46666623478999999999999999998776322   2345789999995  99999


Q ss_pred             EecCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCccchhccc
Q 018404           88 VVDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGIL  137 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l  137 (356)
                      ++|++++++++||||++.                              |+|+||++++++. ++++ |+++++. .++++
T Consensus        71 ~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~e-~aa~~  147 (171)
T d1h2ba1          71 EVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRS-VIKL-PKDVRVE-VDIHK  147 (171)
T ss_dssp             EECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGG-EEEC-CTTCCCC-EEEEE
T ss_pred             cccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhc-ceec-CCCCCHH-HHHHH
Confidence            999999999999999753                              6899999999998 9999 9996554 47778


Q ss_pred             CcchHHHHHHHHHHcCCCCCCEEEE
Q 018404          138 GMPGMTAWAGFYEICAPKKGEYIYV  162 (356)
Q Consensus       138 ~~~~~tA~~~l~~~~~~~~g~~VlI  162 (356)
                      .+++.|||+++. .+.+ .|++|||
T Consensus       148 ~~~~~ta~~al~-~~~~-~G~~VlI  170 (171)
T d1h2ba1         148 LDEINDVLERLE-KGEV-LGRAVLI  170 (171)
T ss_dssp             GGGHHHHHHHHH-TTCC-SSEEEEE
T ss_pred             HhHHHHHHHHHH-hcCC-CCCEEEe
Confidence            899999999995 5777 8999998

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=2.3e-24  Score=177.24  Aligned_cols=162  Identities=23%  Similarity=0.328  Sum_probs=139.1

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      ++|+++++++|||+++++ +++++|++|+|+| +|++|++++|++|.+|++|++++++++++          +.++ ++|
T Consensus         5 ~aA~l~ca~~Ta~~al~~-~~~~~g~~VlV~G-aG~vG~~~~~~ak~~G~~Vi~~~~~~~~~----------~~a~-~~G   71 (166)
T d1llua2           5 EIAPILCAGVTVYKGLKQ-TNARPGQWVAISG-IGGLGHVAVQYARAMGLHVAAIDIDDAKL----------ELAR-KLG   71 (166)
T ss_dssp             HHGGGGTHHHHHHHHHHH-HTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHH-HTT
T ss_pred             HHHHHHHHHHHHHHHHHH-hCCCCCCEEEEee-ccccHHHHHHHHHHcCCccceecchhhHH----------Hhhh-ccC
Confidence            688999999999999964 7999999999998 69999999999999999999999999998          9999 999


Q ss_pred             CCEEEecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhccee
Q 018404          213 FDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRM  292 (356)
Q Consensus       213 ~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (356)
                      +++++|+.++ ++.+.+++.+.+..+.++++.++..+..++++|+++|+++.+|...+      ....+...++.|++++
T Consensus        72 a~~~i~~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i  144 (166)
T d1llua2          72 ASLTVNARQE-DPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG------DFPTPIFDVVLKGLHI  144 (166)
T ss_dssp             CSEEEETTTS-CHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEE
T ss_pred             ccccccccch-hHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCC------CccCCHHHHHhCCcEE
Confidence            9999999887 88888887765544444444444899999999999999999997432      2346778899999999


Q ss_pred             eceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          293 EGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       293 ~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      .|+...+     .++++++++++++|.
T Consensus       145 ~Gs~~~~-----~~d~~e~l~l~~~Gl  166 (166)
T d1llua2         145 AGSIVGT-----RADLQEALDFAGEGL  166 (166)
T ss_dssp             EECCSCC-----HHHHHHHHHHHHTTS
T ss_pred             EEEeecC-----HHHHHHHHHHHHCcC
Confidence            9988776     677899999999873

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=4.7e-25  Score=173.07  Aligned_cols=127  Identities=14%  Similarity=0.133  Sum_probs=108.2

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||++++++  |+|    +++  .+++.| .|+++||+||+.++|||++|++.++ .+.....+|+++|||+  +|+|  
T Consensus         1 MkA~~~~~~--G~~----l~~--~e~~~p-~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~--~G~V--   67 (131)
T d1iz0a1           1 MKAWVLKRL--GGP----LEL--VDLPEP-EAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEV--VGVV--   67 (131)
T ss_dssp             CEEEEECST--TSC----EEE--EECCCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEE--EEEE--
T ss_pred             CcEEEEccC--CCC----CEE--EEccCC-CCCCCEEEEEEEEEeccccccccccccccccccceeEeeeee--EEee--
Confidence            799999998  876    455  566666 7899999999999999999999887 3445567899999985  8888  


Q ss_pred             ecCCCCCCCCCCEEEEc---cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEe
Q 018404           89 VDSGHPEFKKGDLVWGT---TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVS  163 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~  163 (356)
                               +||+|+++   |+|+||++++++. ++++ |+++++. ++|++++++.|||++|.+.+  +.|++||++
T Consensus        68 ---------vGd~V~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1          68 ---------EGRRYAALVPQGGLAERVAVPKGA-LLPL-PEGRPVV-GPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             ---------TTEEEEEECSSCCSBSEEEEEGGG-CEEC-CTTCCCE-EEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             ---------ccceEEEEeccCccceeeeeCHHH-eEEc-cCCCCHH-HHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence                     49999988   8999999999999 9999 9996665 68889999999999997655  569999874

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=4.2e-24  Score=175.93  Aligned_cols=167  Identities=24%  Similarity=0.309  Sum_probs=145.5

Q ss_pred             CccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHH
Q 018404          129 PLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLK  208 (356)
Q Consensus       129 ~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~  208 (356)
                      +++ ++|+++++++|||++++ ..++++|++|+|+| +|++|++++|+++.+|++|++++++++++          +.++
T Consensus         2 s~e-eAA~l~~~~~Ta~~al~-~~~~~~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~----------~~~k   68 (168)
T d1rjwa2           2 SFE-EAAPIFCAGVTTYKALK-VTGAKPGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKL----------ELAK   68 (168)
T ss_dssp             CHH-HHGGGGTHHHHHHHHHH-HHTCCTTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH
T ss_pred             CHH-HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHh----------hhhh
Confidence            355 68999999999999996 47899999999998 69999999999999999999999999998          9999


Q ss_pred             hhcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhh
Q 018404          209 NKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYK  288 (356)
Q Consensus       209 ~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  288 (356)
                       ++|++.++++.+. ++.+.+++.+.+..|+++++.+...+..++++++++|+++.+|....      ....+...++.+
T Consensus        69 -~~Ga~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~------~~~~~~~~~~~~  140 (168)
T d1rjwa2          69 -ELGADLVVNPLKE-DAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------EMPIPIFDTVLN  140 (168)
T ss_dssp             -HTTCSEEECTTTS-CHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------EEEEEHHHHHHT
T ss_pred             -hcCcceecccccc-hhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccC------CCCCCHHHHHHC
Confidence             9999999999987 88999999887766666655555889999999999999999987433      334677888999


Q ss_pred             cceeeceeeecchhhHHHHHHHHHHHHHcCCCc
Q 018404          289 RIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV  321 (356)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~  321 (356)
                      ++++.|+....     .++++++++++++|+++
T Consensus       141 ~~~i~gs~~~~-----~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         141 GIKIIGSIVGT-----RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             TCEEEECCSCC-----HHHHHHHHHHHHTTSCC
T ss_pred             CcEEEEEeeCC-----HHHHHHHHHHHHhCCCC
Confidence            99999987766     67899999999999985

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.7e-24  Score=181.33  Aligned_cols=145  Identities=11%  Similarity=-0.077  Sum_probs=117.5

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      .|.+|||+++.++  +...  .+.+.+.+  .+ +++++||+||+.++|||++|++.+.+......+|+++|||+  +|+
T Consensus         3 ~P~~~ka~~~~~~--~~~~--~~~~~~~~--p~-p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~--~G~   73 (192)
T d1piwa1           3 YPEKFEGIAIQSH--EDWK--NPKKTKYD--PK-PFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEI--VGK   73 (192)
T ss_dssp             TTTCEEEEEECCS--SSTT--SCEEEEEC--CC-CCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCE--EEE
T ss_pred             CCceeEEEEEeCC--CcCC--cceEeecc--CC-CCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCccccc--ccc
Confidence            6789999999887  5442  34454333  33 78999999999999999999998875555667899999995  999


Q ss_pred             EEEecCCC-CCCCCCCEEEEc--------------------------------------cccceeEeecCCCcceeecCC
Q 018404           86 AKVVDSGH-PEFKKGDLVWGT--------------------------------------TGWEEYSLIKNPQGLFKIHHT  126 (356)
Q Consensus        86 V~~vG~~v-~~~~~Gd~V~~~--------------------------------------g~~~~~~~v~~~~~l~~~~p~  126 (356)
                      |+++|+++ +.+++||||...                                      |+|+||+++++.+ ++++ |+
T Consensus        74 Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~-~~~i-P~  151 (192)
T d1piwa1          74 VVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHF-VVPI-PE  151 (192)
T ss_dssp             EEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGG-EEEC-CT
T ss_pred             hhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHH-eEEC-CC
Confidence            99999987 569999999511                                      6899999999988 9999 99


Q ss_pred             CCCccchhcccCcc-hHHHHHHHHHHcCCCCCCEEEEec
Q 018404          127 DVPLSYYTGILGMP-GMTAWAGFYEICAPKKGEYIYVSA  164 (356)
Q Consensus       127 ~~~~~~~~a~l~~~-~~tA~~~l~~~~~~~~g~~VlI~g  164 (356)
                      ++++  +.|++.+. +.|||+++. .+++++|++|+|..
T Consensus       152 ~l~~--e~Aal~~~~~~ta~~~l~-~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         152 NIWV--ETLPVGEAGVHEAFERME-KGDVRYRFTLVGYD  187 (192)
T ss_dssp             TCCE--EEEESSHHHHHHHHHHHH-HTCCSSEEEEECCH
T ss_pred             CCCH--HHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEC
Confidence            9654  45556655 679999995 68999999999863

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.91  E-value=2e-24  Score=178.52  Aligned_cols=167  Identities=17%  Similarity=0.137  Sum_probs=134.6

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      +++.+++++.|||+++. .+++++|++|+|+| +|++|++++|+||.+|+ +|++++++++++          +.++ ++
T Consensus         5 ~A~~l~~~~~ta~~a~~-~a~~~~g~~VlI~G-aG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~----------~~a~-~l   71 (174)
T d1jqba2           5 NAVMITDMMTTGFHGAE-LADIEMGSSVVVIG-IGAVGLMGIAGAKLRGAGRIIGVGSRPICV----------EAAK-FY   71 (174)
T ss_dssp             HHHTTTTHHHHHHHHHH-HTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSCEEEECCCHHHH----------HHHH-HH
T ss_pred             HHHHhhhHHHHHHHHHH-HhCCCCCCEEEEEc-CCcchhhhhhhhhcccccccccccchhhhH----------HHHH-hh
Confidence            57778999999999985 58999999999998 69999999999999998 799999999998          8898 99


Q ss_pred             CCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhc
Q 018404          212 GFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR  289 (356)
Q Consensus       212 g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  289 (356)
                      |+++++|++++ ++.+.+.+.+++ |+|++|||+|+ ..++.++++++++|+++.+|.......  ...+........++
T Consensus        72 Ga~~~i~~~~~-~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~--~~~~~~~~~~~~~~  148 (174)
T d1jqba2          72 GATDILNYKNG-HIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDA--LLIPRVEWGCGMAH  148 (174)
T ss_dssp             TCSEEECGGGS-CHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSE--EEEETTTTGGGTBC
T ss_pred             Cccccccccch-hHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCc--CcCcHhHHHHHhCc
Confidence            99999999887 899999999988 99999999998 678999999999999999997543210  01111112233456


Q ss_pred             ceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          290 IRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      .++.+......    +...+++.++++.|+
T Consensus       149 ~~i~g~~~~~~----r~~~e~l~~li~~gk  174 (174)
T d1jqba2         149 KTIKGGLCPGG----RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CEEEEBCCCCH----HHHHHHHHHHHHTTS
T ss_pred             cEEEEecCCCC----cccHHHHHHHHHcCC
Confidence            66666544331    455677888888775

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.90  E-value=3.3e-23  Score=171.80  Aligned_cols=171  Identities=18%  Similarity=0.172  Sum_probs=136.9

Q ss_pred             ccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHH
Q 018404          130 LSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLK  208 (356)
Q Consensus       130 ~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~  208 (356)
                      ++ ++|.++|++.|||+++.+.+++++||+|+|+| +|++|++++|+++.+|+ +|++++++++++          +.++
T Consensus         3 ~e-~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~G-aGGvG~~aiq~ak~~G~~~vi~~~~~~~k~----------~~ak   70 (176)
T d2fzwa2           3 LD-KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDINKDKF----------ARAK   70 (176)
T ss_dssp             HH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGH----------HHHH
T ss_pred             HH-HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEec-chhHHHHHHHHHHHHhcCceEEEcccHHHH----------HHHH
Confidence            44 68899999999999998889999999999999 58999999999999997 788888888888          8899


Q ss_pred             hhcCCCEEEecCCc-ccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH
Q 018404          209 NKFGFDDAFNYKEE-NDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV  286 (356)
Q Consensus       209 ~~~g~~~vv~~~~~-~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  286 (356)
                       ++|+++++|+.+. +...+.+++.+++++|++||++|+ ..+..+..+++++|+++.++.....    ..........+
T Consensus        71 -~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~----~~~~~~~~~~~  145 (176)
T d2fzwa2          71 -EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS----GEEIATRPFQL  145 (176)
T ss_dssp             -HHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----TCCEEECTHHH
T ss_pred             -HhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccc----cccccccHHHH
Confidence             9999999998652 256666777776799999999999 6778889999999888877653322    11122333445


Q ss_pred             hhcceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          287 YKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      .++.++.|+...++..  .+++.++++++++||
T Consensus       146 ~~~~~i~Gs~~G~~~~--~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         146 VTGRTWKGTAFGGWKS--VESVPKLVSEYMSKK  176 (176)
T ss_dssp             HTTCEEEECSGGGCCH--HHHHHHHHHHHHTTS
T ss_pred             HCCCEEEEEeeeCCcH--HHHHHHHHHHHHcCC
Confidence            6778888887665432  677899999999886

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.90  E-value=2.2e-23  Score=172.08  Aligned_cols=168  Identities=17%  Similarity=0.178  Sum_probs=134.9

Q ss_pred             ccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHH
Q 018404          130 LSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLK  208 (356)
Q Consensus       130 ~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~  208 (356)
                      ++ ++|.+.|.+.|+|+++.+.+++++||+|+|+| +|++|++++|+++.+|+ +|++++.+++++          +.++
T Consensus         3 Le-~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~----------~~a~   70 (174)
T d1e3ia2           3 LE-RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKF----------PKAK   70 (174)
T ss_dssp             HH-HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH----------HHHH
T ss_pred             HH-HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHH----------HHHH
Confidence            55 68889999999999998889999999999998 79999999999999999 788999999998          8999


Q ss_pred             hhcCCCEEEecCCccc-HHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccC-CeEEEEccccccCCCCCccccchHHH
Q 018404          209 NKFGFDDAFNYKEEND-LDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLH-GRIAACGMISQYNLSQPEGVHNLMNV  285 (356)
Q Consensus       209 ~~~g~~~vv~~~~~~~-~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  285 (356)
                       ++|+++++|+...++ .....+...++|+|++|||+|+ ..+..++++++++ |+++.+|...+      ....+...+
T Consensus        71 -~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~------~~~i~~~~~  143 (174)
T d1e3ia2          71 -ALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------EMTIPTVDV  143 (174)
T ss_dssp             -HTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------EEEEEHHHH
T ss_pred             -HhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC------ccccchHHH
Confidence             999999998765323 3444444445599999999999 7899999999996 99999997432      223344444


Q ss_pred             HhhcceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          286 VYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      +. +.++.|+....+.  ..+++.++++++++||
T Consensus       144 ~~-~k~i~Gs~~Gs~~--~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         144 IL-GRSINGTFFGGWK--SVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HT-TCEEEECSGGGCC--HHHHHHHHHHHHHTTS
T ss_pred             hc-cCEEEEEEeeCCC--hHHHHHHHHHHHHCcC
Confidence            43 4567776655542  2678899999999886

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.4e-23  Score=172.65  Aligned_cols=160  Identities=20%  Similarity=0.254  Sum_probs=133.1

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      .+|++.|++.|+|++++ .+++++|++|+|+| +|++|++++|+||.+|+++++++++++++          +.++ ++|
T Consensus         8 ~~Apl~Cag~Tay~al~-~~~~~~G~~VlI~G-aG~vG~~a~qlak~~Ga~~i~~~~~~~~~----------~~a~-~lG   74 (168)
T d1uufa2           8 AVAPLLCAGITTYSPLR-HWQAGPGKKVGVVG-IGGLGHMGIKLAHAMGAHVVAFTTSEAKR----------EAAK-ALG   74 (168)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSGGGH----------HHHH-HHT
T ss_pred             HHHHHHhHHHHHHHHHH-HhCCCCCCEEEEec-cchHHHHHHHHhhcccccchhhccchhHH----------HHHh-ccC
Confidence            57789999999999995 58999999999998 69999999999999999999999999998          8999 999


Q ss_pred             CCEEEecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcce
Q 018404          213 FDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIR  291 (356)
Q Consensus       213 ~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  291 (356)
                      +++++|+.+. +..    ....+++|.+|||+|+ ..+..++++++++|+++.+|...+.     ....+...++.++++
T Consensus        75 ad~~i~~~~~-~~~----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~l~~k~~~  144 (168)
T d1uufa2          75 ADEVVNSRNA-DEM----AAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATP-----HKSPEVFNLIMKRRA  144 (168)
T ss_dssp             CSEEEETTCH-HHH----HTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCE
T ss_pred             CcEEEECchh-hHH----HHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCC-----cccccHHHHHHCCcE
Confidence            9999998874 321    1112389999999998 6799999999999999999975432     233567778889999


Q ss_pred             eeceeeecchhhHHHHHHHHHHHHHcCCC
Q 018404          292 MEGFVVFDYFPQYSRFLDAVLPYIREGKV  320 (356)
Q Consensus       292 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~l  320 (356)
                      +.|+...+     .++++++++++++++|
T Consensus       145 i~Gs~~~~-----~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         145 IAGSMIGG-----IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             EEECCSCC-----HHHHHHHHHHHHHHTC
T ss_pred             EEEEeecC-----HHHHHHHHHHHHHcCC
Confidence            99988777     7788999999988764

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.90  E-value=1.1e-23  Score=176.72  Aligned_cols=139  Identities=14%  Similarity=0.120  Sum_probs=111.1

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAK   87 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~   87 (356)
                      .+|+|.++.+.  |+|    |+++  ++|.| +|+++||+||+.++|||++|++.+.+.. ...+|.|+|||+  +|+|+
T Consensus         2 k~~~Aav~~~~--g~~----l~l~--~v~~P-~p~~geVlVkv~a~gic~sD~~~~~G~~-~~~~P~i~GHE~--~G~V~   69 (194)
T d1f8fa1           2 KDIIAAVTPCK--GAD----FELQ--ALKIR-QPQGDEVLVKVVATGMCHTDLIVRDQKY-PVPLPAVLGHEG--SGIIE   69 (194)
T ss_dssp             EEEEEEEBCST--TCC----CEEE--EEEEC-CCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSBCCCCEE--EEEEE
T ss_pred             ceeEEEEEcCC--CCC----cEEE--EeeCC-CCCCCEEEEEEEEEEecCchHhhhhhcc-cccCCcccccce--EEEee
Confidence            47889999887  666    5665  55556 8899999999999999999999887332 346799999996  99999


Q ss_pred             EecCCCCCCCCCCEEEEc----------------------------------------------------cccceeEeec
Q 018404           88 VVDSGHPEFKKGDLVWGT----------------------------------------------------TGWEEYSLIK  115 (356)
Q Consensus        88 ~vG~~v~~~~~Gd~V~~~----------------------------------------------------g~~~~~~~v~  115 (356)
                      ++|+++++|++||+|+..                                                    |+|+||++++
T Consensus        70 ~vG~~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~  149 (194)
T d1f8fa1          70 AIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSR  149 (194)
T ss_dssp             EECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEE
T ss_pred             ecCccceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEe
Confidence            999999999999999641                                                    4678888888


Q ss_pred             CCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEE
Q 018404          116 NPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGS  187 (356)
Q Consensus       116 ~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~  187 (356)
                      +.+ ++++ |+++++.                          +.+++.| .|++|++++|+++.+|++.++.
T Consensus       150 ~~~-~~~i-p~~i~~~--------------------------~~~~i~g-~g~~g~~aiq~a~~~g~~~iia  192 (194)
T d1f8fa1         150 ENN-TVKV-TKDFPFD--------------------------QLVKFYA-FDEINQAAIDSRKGITLKPIIK  192 (194)
T ss_dssp             GGG-EEEE-CTTCCGG--------------------------GGEEEEE-GGGHHHHHHHHHHTSCSEEEEE
T ss_pred             hHH-EEEC-CCCCCcc--------------------------cEEEEeC-cHHHHHHHHHHHHHcCCCEEEE
Confidence            877 8888 7774432                          2234445 8999999999999999964443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=3e-24  Score=176.75  Aligned_cols=161  Identities=18%  Similarity=0.181  Sum_probs=135.2

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG  212 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g  212 (356)
                      .+|++.|++.|||+++. ..++++|++|+|+| +|++|++++|++|.+|++|++++++++++          +.++ ++|
T Consensus         5 ~AApl~cag~Ta~~al~-~~~~~~g~~vlI~G-aG~vG~~a~q~ak~~G~~vi~~~~~~~k~----------~~a~-~lG   71 (168)
T d1piwa2           5 LAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVG-LGGIGSMGTLISKAMGAETYVISRSSRKR----------EDAM-KMG   71 (168)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSSTTH----------HHHH-HHT
T ss_pred             HHHHHHHHHHHHHHHHH-HhCcCCCCEEEEEC-CCCcchhHHHHhhhccccccccccchhHH----------HHhh-ccC
Confidence            47789999999999996 57999999999999 59999999999999999999999999998          9999 999


Q ss_pred             CCEEEecCCcccHHHHHHHhCCCCccEEEeCCCch---HHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhc
Q 018404          213 FDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGK---MLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR  289 (356)
Q Consensus       213 ~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  289 (356)
                      +++++++.++.++.+    ...+++|.++||+|+.   .+..++++++++|+++.+|.....      ...+...++.|+
T Consensus        72 a~~~i~~~~~~~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~k~  141 (168)
T d1piwa2          72 ADHYIATLEEGDWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQH------EMLSLKPYGLKA  141 (168)
T ss_dssp             CSEEEEGGGTSCHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSS------CCEEECGGGCBS
T ss_pred             CcEEeeccchHHHHH----hhhcccceEEEEecCCccchHHHHHHHhhccceEEEecccccc------ccccHHHHHhCC
Confidence            999999865424332    2234799999998873   477899999999999999974432      234555678899


Q ss_pred             ceeeceeeecchhhHHHHHHHHHHHHHcCCCc
Q 018404          290 IRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV  321 (356)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~  321 (356)
                      +++.|+...+     .++++++++++++|+++
T Consensus       142 ~~i~Gs~~g~-----~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         142 VSISYSALGS-----IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             CEEEECCCCC-----HHHHHHHHHHHHHTTCC
T ss_pred             cEEEEEeeCC-----HHHHHHHHHHHHhCCCC
Confidence            9999987776     77899999999999985

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=1.6e-23  Score=173.89  Aligned_cols=138  Identities=14%  Similarity=0.146  Sum_probs=112.8

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      |+++|||++++++  ++|    |+++  +++.| .++++||||||.++|||++|++.+++......+|.++|||+  +|+
T Consensus         1 m~~k~kA~v~~~~--~~p----l~i~--ev~~P-~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~--~G~   69 (184)
T d1vj0a1           1 MGLKAHAMVLEKF--NQP----LVYK--EFEIS-DIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEG--AGR   69 (184)
T ss_dssp             CCEEEEEEEBCST--TSC----CEEE--EEEEC-CCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEE--EEE
T ss_pred             CCceEEEEEEecC--CCC----cEEE--EeeCC-CCCCCEEEEEEEEECCCCCchhheeccCCccccccccceee--eee
Confidence            5678999999998  777    5775  55556 88999999999999999999998885555556899999995  999


Q ss_pred             EEEecCCCC-----CCCCCCEEEE---------------------------------------ccccceeEeecC-CCcc
Q 018404           86 AKVVDSGHP-----EFKKGDLVWG---------------------------------------TTGWEEYSLIKN-PQGL  120 (356)
Q Consensus        86 V~~vG~~v~-----~~~~Gd~V~~---------------------------------------~g~~~~~~~v~~-~~~l  120 (356)
                      |+++|++|+     ++++||+|+.                                       .|+|+||++++. .+ +
T Consensus        70 V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~-v  148 (184)
T d1vj0a1          70 VVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETD-V  148 (184)
T ss_dssp             EEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCC-E
T ss_pred             eeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHc-E
Confidence            999999886     4689999973                                       168899999964 56 9


Q ss_pred             eeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEec
Q 018404          121 FKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSA  164 (356)
Q Consensus       121 ~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~g  164 (356)
                      +++ |++++..       .++.+|++++ +.+++++|++|+|+.
T Consensus       149 ~~i-p~~l~~~-------~pl~~A~~a~-~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         149 LKV-SEKITHR-------LPLKEANKAL-ELMESREALKVILYP  183 (184)
T ss_dssp             EEE-CTTCCEE-------EEGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred             EEC-CCCCCHH-------HHHHHHHHHH-HHhCCCcCCEEEEee
Confidence            999 9985432       1456788888 457899999999974

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.90  E-value=1.6e-23  Score=173.77  Aligned_cols=138  Identities=17%  Similarity=0.142  Sum_probs=109.8

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccC--------CCCCCCCCCCCCcce
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFN--------QDPDFSSFTPGSPIE   81 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~--------~~~~~~p~v~G~e~~   81 (356)
                      |||++++++  |+|    |+++  +++.| +++++||+||+.++|||++|++.+++.        .....+|+|+|||+ 
T Consensus         1 MKA~~~~~~--G~p----l~i~--dv~~P-~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~-   70 (177)
T d1jvba1           1 MRAVRLVEI--GKP----LSLQ--EIGVP-KPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI-   70 (177)
T ss_dssp             CEEEEECST--TSC----CEEE--ECCCC-CCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEE-
T ss_pred             CeEEEEEeC--CCC----CEEE--EeeCC-CCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceE-
Confidence            899999998  887    5664  66666 789999999999999999999987732        23346799999995 


Q ss_pred             ecEEEEEecCCCCCCCCCCEEEEc------------------------------cccceeEeecCCCcceeecCCCCCcc
Q 018404           82 GFGVAKVVDSGHPEFKKGDLVWGT------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLS  131 (356)
Q Consensus        82 ~~G~V~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~  131 (356)
                       +|+|+++|++++++++||+|++.                              |+|+||+++++.+.++++ |+..+..
T Consensus        71 -~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~-~~~~~~~  148 (177)
T d1jvba1          71 -AGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRVKPMI  148 (177)
T ss_dssp             -EEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCCCC
T ss_pred             -EEEEeeeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEEC-CCCChHH
Confidence             89999999999999999999753                              689999999877636666 6653322


Q ss_pred             chhcccCcchHHHHHHHHHHcCCCCCCEEEE
Q 018404          132 YYTGILGMPGMTAWAGFYEICAPKKGEYIYV  162 (356)
Q Consensus       132 ~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI  162 (356)
                       .++.+..++.+|++++.. .++ .|++|||
T Consensus       149 -~a~~~~~~~~~a~~~~~~-~~~-~G~~VlI  176 (177)
T d1jvba1         149 -TKTMKLEEANEAIDNLEN-FKA-IGRQVLI  176 (177)
T ss_dssp             -EEEEEGGGHHHHHHHHHT-TCC-CSEEEEE
T ss_pred             -HHHHHHHHHHHHHHHHHh-hcc-cCCceEC
Confidence             233445788999999954 555 5899997

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.2e-23  Score=173.98  Aligned_cols=138  Identities=16%  Similarity=0.110  Sum_probs=110.5

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhcc---CCCCCCCCCCCCCcceecE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSF---NQDPDFSSFTPGSPIEGFG   84 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~---~~~~~~~p~v~G~e~~~~G   84 (356)
                      +.|.|++++.+     .  +|++  .++|.| +++++||+|||.+++||++|++.++.   ......+|.++|||+  +|
T Consensus         6 p~~~a~V~~gp-----~--~l~l--~evp~P-~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~--~G   73 (185)
T d1pl8a1           6 PNNLSLVVHGP-----G--DLRL--ENYPIP-EPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEA--SG   73 (185)
T ss_dssp             CCCEEEEEEET-----T--EEEE--EECCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEE--EE
T ss_pred             CCCEEEEEeCC-----C--eEEE--EEeECC-CCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeee--ee
Confidence            46789999875     2  2444  677777 88999999999999999999988762   223456789999995  99


Q ss_pred             EEEEecCCCCCCCCCCEEEEc-------------------------------cccceeEeecCCCcceeecCCCCCccch
Q 018404           85 VAKVVDSGHPEFKKGDLVWGT-------------------------------TGWEEYSLIKNPQGLFKIHHTDVPLSYY  133 (356)
Q Consensus        85 ~V~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~l~~~~p~~~~~~~~  133 (356)
                      +|+++|+++++|++||+|+..                               |+|+||++++.++ ++++ |+++++. +
T Consensus        74 ~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~-~~~l-P~~~~~~-~  150 (185)
T d1pl8a1          74 TVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF-CYKL-PDNVKPL-V  150 (185)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTCGGG-E
T ss_pred             eEEEeccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHH-EEEC-CCCCCHH-H
Confidence            999999999999999999742                               5699999999998 9999 9995543 3


Q ss_pred             hcccCcchHHHHHHHHHHcCCCCCCEEEEe
Q 018404          134 TGILGMPGMTAWAGFYEICAPKKGEYIYVS  163 (356)
Q Consensus       134 ~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~  163 (356)
                      ++.  .++.+|++++. ..++++|++|+|.
T Consensus       151 aa~--~pl~~a~~a~~-~~~~~~G~~VlIg  177 (185)
T d1pl8a1         151 THR--FPLEKALEAFE-TFKKGLGLKIMLK  177 (185)
T ss_dssp             EEE--EEGGGHHHHHH-HHHTTCCSEEEEE
T ss_pred             HHH--HHHHHHHHHHH-HhCCCCCCEEEEE
Confidence            433  34567777774 4678999999994

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.8e-24  Score=178.73  Aligned_cols=165  Identities=22%  Similarity=0.287  Sum_probs=132.3

Q ss_pred             hhcccCcchHHHHHHHH---HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh
Q 018404          133 YTGILGMPGMTAWAGFY---EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN  209 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~---~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~  209 (356)
                      ++++++++++|||+++.   +.+...++++|||+||+|++|.+++|+||.+|++||++++++++.          +.++ 
T Consensus         5 ~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~----------~~~~-   73 (177)
T d1o89a2           5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH----------EYLK-   73 (177)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH----------HHHH-
T ss_pred             HHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH----------HHHH-
Confidence            79999999999998764   334445567999999999999999999999999999999999998          8898 


Q ss_pred             hcCCCEEEecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhc
Q 018404          210 KFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR  289 (356)
Q Consensus       210 ~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  289 (356)
                      ++|+++++|+++. ++.+   .+.....|.++|++|+..+..++++|+++|+++.+|..++..     ...+...++.|+
T Consensus        74 ~lGad~vi~~~~~-~~~~---~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~~-----~~~~~~~~~~k~  144 (177)
T d1o89a2          74 SLGASRVLPRDEF-AESR---PLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFT-----LPTTVMPFILRN  144 (177)
T ss_dssp             HHTEEEEEEGGGS-SSCC---SSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSC-----CCCCSHHHHHHC
T ss_pred             hhccccccccccH-HHHH---HHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCcc-----ccccHHHHHHCC
Confidence            9999999999765 4332   222336799999999999999999999999999999876542     334667788999


Q ss_pred             ceeeceeeecc-hhhHHHHHHHHHHHHHc
Q 018404          290 IRMEGFVVFDY-FPQYSRFLDAVLPYIRE  317 (356)
Q Consensus       290 ~~~~~~~~~~~-~~~~~~~l~~~~~~~~~  317 (356)
                      +++.|++.... ++...+.++++.+.+.+
T Consensus       145 ~~i~G~~~~~~~~~~~~~~~~~L~~~l~~  173 (177)
T d1o89a2         145 VRLQGVDSVMTPPERRAQAWQRLVADLPE  173 (177)
T ss_dssp             CEEEECCSSSCCHHHHHHHHHHHHHHSCH
T ss_pred             CeEEEEecccCCHHHHHHHHHHHHHhccc
Confidence            99999865433 44555566666655443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.90  E-value=8.2e-23  Score=168.45  Aligned_cols=163  Identities=20%  Similarity=0.227  Sum_probs=133.3

Q ss_pred             chhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          132 YYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       132 ~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      ++.|++..++.+||+++. .+++++|++|+|+| +|++|++++|+++.+|++|++++++++++          +.++ ++
T Consensus         3 ~e~Aal~ePla~a~~a~~-~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~----------~~a~-~~   69 (170)
T d1e3ja2           3 LEEGALLEPLSVGVHACR-RAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRL----------EVAK-NC   69 (170)
T ss_dssp             HHHHHTHHHHHHHHHHHH-HHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHH-HT
T ss_pred             HHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHH----------HHHH-Hc
Confidence            356667788999999995 57899999999998 89999999999999999999999999999          9999 99


Q ss_pred             CCCEEEecCC--c--ccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH
Q 018404          212 GFDDAFNYKE--E--NDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV  286 (356)
Q Consensus       212 g~~~vv~~~~--~--~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  286 (356)
                      |++..++++.  .  .+..+.+++..++++|+||||+|+ ..++.++++++++|+++.+|....      ....+...++
T Consensus        70 ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~------~~~~~~~~~~  143 (170)
T d1e3ja2          70 GADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNAC  143 (170)
T ss_dssp             TCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHH
T ss_pred             CCcEEEeccccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC------CCCcCHHHHH
Confidence            9987765543  1  123445556556699999999999 678999999999999999997532      2345677889


Q ss_pred             hhcceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          287 YKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      .|++++.|++...      ++++++++++++|+
T Consensus       144 ~k~i~i~gs~~~~------~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         144 AREIDIKSVFRYC------NDYPIALEMVASGR  170 (170)
T ss_dssp             TTTCEEEECCSCS------SCHHHHHHHHHTTS
T ss_pred             HCCCEEEEEECCH------HHHHHHHHHHHcCC
Confidence            9999999875432      34677889998885

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.89  E-value=6.8e-23  Score=169.30  Aligned_cols=167  Identities=15%  Similarity=0.137  Sum_probs=134.6

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      ++|.|.|++.|||+++.+.+++++||+|+|+| +|++|++++|+++.+|+ +|++++++++++          +.++ ++
T Consensus         4 eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl----------~~a~-~l   71 (174)
T d1p0fa2           4 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKF----------PKAI-EL   71 (174)
T ss_dssp             GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGH----------HHHH-HT
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHcCCceeeccCChHHHH----------HHHH-Hc
Confidence            57889999999999998889999999999999 79999999999999997 899999999999          9999 99


Q ss_pred             CCCEEEecCCccc-HHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhcc-CCeEEEEccccccCCCCCccccchHHHHhh
Q 018404          212 GFDDAFNYKEEND-LDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRL-HGRIAACGMISQYNLSQPEGVHNLMNVVYK  288 (356)
Q Consensus       212 g~~~vv~~~~~~~-~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  288 (356)
                      |+++++|+++.++ ..+..+..+++++|++|||+|+ ..+..++..+++ +|+++.+|.....    ...+.+... +.+
T Consensus        72 Ga~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~----~~~~~~~~~-~~~  146 (174)
T d1p0fa2          72 GATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN----ERLPLDPLL-LLT  146 (174)
T ss_dssp             TCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT----CCEEECTHH-HHT
T ss_pred             CCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCc----cccccCHHH-HhC
Confidence            9999999876423 4445555555699999999999 678889988877 5999999974321    122233333 446


Q ss_pred             cceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          289 RIRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      +.++.|+.+..+.   .++++++++++++|+
T Consensus       147 ~~~i~Gs~~G~~~---~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         147 GRSLKGSVFGGFK---GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             TCEEEECSGGGCC---GGGHHHHHHHHHTTS
T ss_pred             CCEEEEEEeCCCC---HHHHHHHHHHHHcCC
Confidence            7889888765532   347889999999885

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.8e-23  Score=170.02  Aligned_cols=164  Identities=17%  Similarity=0.225  Sum_probs=136.5

Q ss_pred             chhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhh
Q 018404          132 YYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNK  210 (356)
Q Consensus       132 ~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~  210 (356)
                      ++.|++..++.+||+++. .+++++|++|+|+| +|++|++++|+++.+|+ +|++++++++++          +.++ +
T Consensus         3 ~e~Aal~epla~a~~a~~-~~~~~~gd~VlI~G-~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl----------~~a~-~   69 (171)
T d1pl8a2           3 FEEGALIEPLSVGIHACR-RGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRL----------SKAK-E   69 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHH----------HHHH-H
T ss_pred             HHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEC-CCccHHHHHHHHHHcCCceEEeccCCHHHH----------HHHH-H
Confidence            355667788999999995 57999999999998 69999999999999999 899999999999          9999 9


Q ss_pred             cCCCEEEecCCcccHHHHHHHh---CCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH
Q 018404          211 FGFDDAFNYKEENDLDAALKRC---FPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV  286 (356)
Q Consensus       211 ~g~~~vv~~~~~~~~~~~~~~~---~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  286 (356)
                      +|+++++++.++ +..+..+..   .+.++|++|||+|+ ..++.++++++++|+++.+|....      ....++..++
T Consensus        70 ~Ga~~~~~~~~~-~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~------~~~~~~~~~~  142 (171)
T d1pl8a2          70 IGADLVLQISKE-SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAA  142 (171)
T ss_dssp             TTCSEEEECSSC-CHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHH
T ss_pred             hCCccccccccc-ccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHH
Confidence            999999988775 554444332   33489999999999 688999999999999999997543      2346778889


Q ss_pred             hhcceeeceeeecchhhHHHHHHHHHHHHHcCCCc
Q 018404          287 YKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVV  321 (356)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~l~  321 (356)
                      .|++++.|++..      .++++++++++++|++.
T Consensus       143 ~k~l~i~Gs~~~------~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         143 IREVDIKGVFRY------CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             HTTCEEEECCSC------SSCHHHHHHHHHTTSCC
T ss_pred             HCCcEEEEEeCC------HhHHHHHHHHHHcCCCC
Confidence            999999987643      23578899999999874

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.89  E-value=1.6e-22  Score=167.63  Aligned_cols=172  Identities=15%  Similarity=0.162  Sum_probs=135.3

Q ss_pred             CccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHH
Q 018404          129 PLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELL  207 (356)
Q Consensus       129 ~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~  207 (356)
                      |++ ++|.++|+++|||+++.+.+++++||+|+|+| .|++|++++++++.+|+ +|++++++++++          +.+
T Consensus         2 Ple-~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~G-aGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~----------~~a   69 (176)
T d2jhfa2           2 PLE-KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKF----------AKA   69 (176)
T ss_dssp             CHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH----------HHH
T ss_pred             CHH-HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEEC-CCCcHHHHHHHHHHcCCceEEeecCcHHHH----------HHH
Confidence            355 68999999999999998889999999999999 58999999999999986 999999999998          888


Q ss_pred             HhhcCCCEEEecCCccc-HHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHH
Q 018404          208 KNKFGFDDAFNYKEEND-LDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNV  285 (356)
Q Consensus       208 ~~~~g~~~vv~~~~~~~-~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  285 (356)
                      + ++|+++++++.+.++ ..+.++...++++|++|||+|. ..+..++..++++|..+.++.....    ..........
T Consensus        70 ~-~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~  144 (176)
T d2jhfa2          70 K-EVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----SQNLSMNPML  144 (176)
T ss_dssp             H-HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----TCCEEECTHH
T ss_pred             H-HhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCC----cccccccHHH
Confidence            8 999999998765323 4445555555599999999999 6778899999998655555543221    1122233456


Q ss_pred             HhhcceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          286 VYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      +.+++++.|+....+.  ..++++++++++.+||
T Consensus       145 ~~~~~~i~Gs~~G~~~--~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         145 LLSGRTWKGAIFGGFK--SKDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHTTCEEEECSGGGCC--HHHHHHHHHHHHHTTS
T ss_pred             HhCCCEEEEEEEeCCC--HHHHHHHHHHHHHCcC
Confidence            6789999998765542  2678899999999886

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.89  E-value=1.9e-22  Score=167.00  Aligned_cols=170  Identities=16%  Similarity=0.105  Sum_probs=135.0

Q ss_pred             ccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHH
Q 018404          130 LSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLK  208 (356)
Q Consensus       130 ~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~  208 (356)
                      ++ ++|.++|++.|||+++.+.+++++||+|+|+| +|++|+.++++++..++ +|++++++++++          +.++
T Consensus         3 ~e-~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl----------~~a~   70 (175)
T d1cdoa2           3 LD-TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKF----------EKAK   70 (175)
T ss_dssp             HH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH----------HHHH
T ss_pred             HH-HHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEe-cCCccchHHHHHHHHhhchheeecchHHHH----------HHHH
Confidence            44 68899999999999998889999999999999 78999999999999977 899999999998          9999


Q ss_pred             hhcCCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH
Q 018404          209 NKFGFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV  286 (356)
Q Consensus       209 ~~~g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  286 (356)
                       ++|+++++|+.++++..+.+.+.+.+ ++|++||++|+ ..+..++.+++++|.++.++.....     .........+
T Consensus        71 -~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~-----~~~~~~~~~~  144 (175)
T d1cdoa2          71 -VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL-----HDVATRPIQL  144 (175)
T ss_dssp             -HTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS-----SCEEECHHHH
T ss_pred             -HcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCC-----cccCccHHHH
Confidence             99999999987653445555555544 99999999999 6778888888887655544432221     2223445566


Q ss_pred             hhcceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          287 YKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      .++.++.|+....+.  .++++.++++++++|+
T Consensus       145 ~~~~~i~Gs~~G~~~--~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         145 IAGRTWKGSMFGGFK--GKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HTTCEEEECSGGGCC--HHHHHHHHHHHHHTTS
T ss_pred             HCCcEEEEEEEeCCc--HHHHHHHHHHHHHcCC
Confidence            778899988766542  2678999999999886

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=1.4e-22  Score=162.10  Aligned_cols=125  Identities=14%  Similarity=0.094  Sum_probs=103.3

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCCCCCCCCCCCCCcceecEEEEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQDPDFSSFTPGSPIEGFGVAKV   88 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~~~~~~p~v~G~e~~~~G~V~~   88 (356)
                      |||++++++  |++.    .++..+++.| ++++|||+|||.|+|||++|..... .+.....+|.++|+|  ++|+|++
T Consensus         1 MkA~v~~~~--~~~~----~l~i~~v~~p-~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e--~~G~V~~   71 (146)
T d1o89a1           1 LQALLLEQQ--DGKT----LASVQTLDES-RLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGID--FAGTVRT   71 (146)
T ss_dssp             CEEEEEECC-----C----EEEEEECCGG-GSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSE--EEEEEEE
T ss_pred             CeEEEEEcC--CCce----EEEEEEcCCC-CCCCCEEEEEEeeccCccceeeEEEeecccccccceecccc--cccccee
Confidence            899999998  7774    4555677777 8899999999999999999998777 345556778999988  5899999


Q ss_pred             ecCCCCCCCCCCEEEEc---------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHH
Q 018404           89 VDSGHPEFKKGDLVWGT---------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGF  148 (356)
Q Consensus        89 vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l  148 (356)
                      +|.  ..+++||+|+..         |+|+||+++++++ ++++ |+++++. ++|++++++.||+.++
T Consensus        72 ~~~--~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~-vv~l-P~~ls~~-eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          72 SED--PRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDW-LVAM-PQGQAAK-EISLSEAPNFAEAIIN  135 (146)
T ss_dssp             ECS--TTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGG-CEEC-CTTSCCE-EECGGGHHHHHHHHHT
T ss_pred             ecc--CCccceeeEEeecccceecCCCcceeeeeeeeee-EEEC-CCCCCHH-HHHHHHHHHHHHHHHH
Confidence            866  478999999863         7999999999999 9999 9997666 6889999999987655

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.88  E-value=1.1e-23  Score=172.29  Aligned_cols=142  Identities=23%  Similarity=0.318  Sum_probs=116.2

Q ss_pred             chHHHHHH---HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          140 PGMTAWAG---FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       140 ~~~tA~~~---l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      ++.|||.+   |.+.+...++++|||+||+|+||.+++|+||.+|++||++++++++.          +.++ ++|++++
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~----------~~~~-~lGad~v   72 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA----------DYLK-QLGASEV   72 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH----------HHHH-HHTCSEE
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHH----------HHHH-hhcccce
Confidence            45677654   55556677788999999999999999999999999999999999998          9999 9999999


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeecee
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFV  296 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (356)
                      +++++  ...+.+....++++|+|||++|++.+..++++|+++|+++.+|..++.     ..+.+...++.|++++.|+.
T Consensus        73 i~~~~--~~~~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~-----~~~~~~~~l~~k~~~i~G~~  145 (167)
T d1tt7a2          73 ISRED--VYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGID  145 (167)
T ss_dssp             EEHHH--HCSSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECC
T ss_pred             Eeccc--hhchhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCC-----cccCCHHHHHHCCcEEEEEe
Confidence            98753  112223333334999999999999999999999999999999987653     33467788899999999976


Q ss_pred             eec
Q 018404          297 VFD  299 (356)
Q Consensus       297 ~~~  299 (356)
                      ...
T Consensus       146 ~~~  148 (167)
T d1tt7a2         146 SVY  148 (167)
T ss_dssp             SSS
T ss_pred             cCC
Confidence            544

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.88  E-value=8.6e-25  Score=178.70  Aligned_cols=147  Identities=17%  Similarity=0.119  Sum_probs=118.8

Q ss_pred             ccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhc-cCCCCCCCCCCCCCcceecEEE
Q 018404            8 LSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS-FNQDPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus         8 ~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~-~~~~~~~~p~v~G~e~~~~G~V   86 (356)
                      .+|||++++++  |.+.  .|++  .+++.| ++++|||+|||+|+|||++|++.+. .+.....+|.++|+|+  +|+|
T Consensus         2 ~~~ka~~~~~~--g~~~--~l~~--~~v~~p-~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~--~G~v   72 (162)
T d1tt7a1           2 TLFQALQAEKN--ADDV--SVHV--KTISTE-DLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDA--AGTV   72 (162)
T ss_dssp             CEEEEEEECCG--GGSC--CCEE--EEEESS-SSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEE--EEEE
T ss_pred             CcEEEEEEEec--CCCe--EEEE--EEcCCC-CCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeec--cccc
Confidence            46899999998  6653  3455  566666 8899999999999999999998877 4444557789999985  7888


Q ss_pred             EEecCCCCCCCCCCEEEEc---------cccceeEeecCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCC
Q 018404           87 KVVDSGHPEFKKGDLVWGT---------TGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG  157 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g  157 (356)
                      .+  +.+.++++||+|+..         |+|+||++++++. ++++ |+++++. +||+++..++|||.++.. .+...+
T Consensus        73 ~~--~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~-l~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~-~~~~~~  146 (162)
T d1tt7a1          73 VS--SNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW-LVPL-PQNLSLK-EAMVDQLLTIVDREVSLE-ETPGAL  146 (162)
T ss_dssp             EE--CSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGG-EEEC-CTTCCHH-HHHHSCSTTSEEEEECST-THHHHH
T ss_pred             cc--ccccccccceeeEeeeccceeccccccceEEEecHHH-EEEC-CCCCCHH-HHHHHHHHHHHHHHHHHh-cCCCCC
Confidence            76  456789999999864         7999999999999 9999 9996665 688999999999987643 334455


Q ss_pred             CEEEEecCCchH
Q 018404          158 EYIYVSAASGAV  169 (356)
Q Consensus       158 ~~VlI~ga~g~v  169 (356)
                      ++|||+|++|++
T Consensus       147 ~~Vli~ga~G~v  158 (162)
T d1tt7a1         147 KDILQNRIQGRV  158 (162)
T ss_dssp             HHTTTTCCSSEE
T ss_pred             CEEEEECCcceE
Confidence            789999988764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.87  E-value=7.3e-22  Score=163.27  Aligned_cols=165  Identities=15%  Similarity=0.139  Sum_probs=130.9

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      .+|.++|.+.|+|+++.+.+++++|++|+|+| .|++|+.++|+++.+|+ +||+++.+++++          +.++ ++
T Consensus         6 ~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl----------~~Ak-~~   73 (176)
T d1d1ta2           6 KVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKF----------EKAM-AV   73 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH----------HHHH-HH
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHH----------HHHH-hc
Confidence            58889999999999998889999999999999 79999999999999996 899999999999          9999 99


Q ss_pred             CCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccC-CeEEEEccccccCCCCCccccchHHHHhh
Q 018404          212 GFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLH-GRIAACGMISQYNLSQPEGVHNLMNVVYK  288 (356)
Q Consensus       212 g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  288 (356)
                      |+++++|+++.+...+.+.+.+.+ |+|++||++|+ ..+..++..+.++ |+++.+|.....    .....++. .+.+
T Consensus        74 GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~----~~~~~~~~-~~~~  148 (176)
T d1d1ta2          74 GATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA----KMLTYDPM-LLFT  148 (176)
T ss_dssp             TCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTT----CCEEECTH-HHHT
T ss_pred             CCcEEECccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccc----cccCCCHH-HHhC
Confidence            999999987653445566666655 99999999999 5778888877665 999999975332    11222333 3446


Q ss_pred             cceeeceeeecchhhHHHHHHHHHHHHH
Q 018404          289 RIRMEGFVVFDYFPQYSRFLDAVLPYIR  316 (356)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~  316 (356)
                      +.++.|+...+...  .+++.++++++.
T Consensus       149 ~~~i~Gs~~G~~~~--~~dip~li~~~~  174 (176)
T d1d1ta2         149 GRTWKGCVFGGLKS--RDDVPKLVTEFL  174 (176)
T ss_dssp             TCEEEECSGGGCCH--HHHHHHHHHHHT
T ss_pred             CCEEEEEEEeCCCc--HHHHHHHHHHHh
Confidence            78888887655422  567777776654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.87  E-value=2.1e-21  Score=163.06  Aligned_cols=168  Identities=18%  Similarity=0.158  Sum_probs=135.5

Q ss_pred             hhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc
Q 018404          133 YTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF  211 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (356)
                      ++++|+..+.|||+++. .+++++|++|+|+| +|++|++++++++.+|+ +|++++++++++          +.++ ++
T Consensus         3 d~~~l~d~~~ta~~a~~-~a~v~~G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl----------~~a~-~~   69 (195)
T d1kola2           3 DLTCLSDILPTGYHGAV-TAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARL----------AHAK-AQ   69 (195)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHH----------HHHH-HT
T ss_pred             hHHhcccHHHHHHHHHH-HhCCCCCCEEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhh----------Hhhh-hc
Confidence            46788999999999985 68999999999998 79999999999999998 899999999998          9999 99


Q ss_pred             CCCEEEecCCcccHHHHHHHhCCC-CccEEEeCCCc----------------hHHHHHHHhhccCCeEEEEccccccCC-
Q 018404          212 GFDDAFNYKEENDLDAALKRCFPE-GIDIYFEHVGG----------------KMLDAVLLNMRLHGRIAACGMISQYNL-  273 (356)
Q Consensus       212 g~~~vv~~~~~~~~~~~~~~~~~~-~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~-  273 (356)
                      |+++++++.++ ++.+.+.+.|++ ++|++|||+|.                +.++.++++++++|+++.+|....... 
T Consensus        70 Ga~~~~~~~~~-~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~  148 (195)
T d1kola2          70 GFEIADLSLDT-PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPG  148 (195)
T ss_dssp             TCEEEETTSSS-CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTT
T ss_pred             cccEEEeCCCc-CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCccc
Confidence            99999998887 999999999988 99999999994                479999999999999999997433210 


Q ss_pred             CC------CccccchHHHHhhcceeeceeeecchhhHHHHHHHHHHHHHcCC
Q 018404          274 SQ------PEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGK  319 (356)
Q Consensus       274 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~  319 (356)
                      ..      ......+..++.|++++.+-..     ....+++++++++.+++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~k~~~i~~g~~-----~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         149 AVDAAAKIGSLSIRFGLGWAKSHSFHTGQT-----PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CSSHHHHTTCCCCCHHHHHHTTCEEEESSC-----CHHHHHHHHHHHHHTTS
T ss_pred             chhhhhhcCceeeeHHHHHhhcceeccCCC-----chHHHHHHHHHHHHcCC
Confidence            00      0112334456677777643111     22556778888888764

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.87  E-value=5.8e-24  Score=175.67  Aligned_cols=109  Identities=21%  Similarity=0.121  Sum_probs=89.7

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||+++.++  +     ++++  .++|.| .++++||+||+.++|||++|++.+........+|.++|||+  +|+|+++
T Consensus         1 MKa~v~~~~--~-----~l~i--~e~p~P-~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~--~G~V~~v   68 (177)
T d1jqba1           1 MKGFAMLGI--N-----KLGW--IEKERP-VAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEA--VGEVVEV   68 (177)
T ss_dssp             CEEEEEEET--T-----EEEE--EECCCC-CCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCE--EEEEEEE
T ss_pred             CeEEEEEeC--C-----CeEE--EEeeCC-CCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCccee--eEEeeec
Confidence            799999886  2     2445  566667 88999999999999999999987764444556799999995  9999999


Q ss_pred             cCCCCCCCCCCEEEEc---------------------------------cccceeEeecCC-CcceeecCCCCCcc
Q 018404           90 DSGHPEFKKGDLVWGT---------------------------------TGWEEYSLIKNP-QGLFKIHHTDVPLS  131 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~~-~~l~~~~p~~~~~~  131 (356)
                      |+++++|++||||+..                                 |+|+||++++.. ..++++ |+++++.
T Consensus        69 G~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~i-P~~~~~~  143 (177)
T d1jqba1          69 GSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAIL-PKDVDLS  143 (177)
T ss_dssp             CTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEEC-CTTSCGG
T ss_pred             ccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEEC-CCCcchH
Confidence            9999999999999731                                 689999999863 238999 9996554

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.86  E-value=7.4e-22  Score=166.50  Aligned_cols=141  Identities=16%  Similarity=0.160  Sum_probs=110.7

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      .+++|||+++.++  ++|    |+++  +++.| +|+++||||||.++|||++|++.+++.. ...+|.++|||+  +|+
T Consensus         5 ~~~k~KAavl~~~--~~~----l~i~--ev~~P-~p~~~eVlVkV~a~giC~sDl~~~~G~~-~~~~P~i~GHE~--~G~   72 (198)
T d2jhfa1           5 KVIKCKAAVLWEE--KKP----FSIE--EVEVA-PPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEA--AGI   72 (198)
T ss_dssp             SCEEEEEEEBCST--TSC----CEEE--EEEEC-CCCTTEEEEEEEEEECCHHHHHHHHTSS-CCCSSBCCCCSE--EEE
T ss_pred             CceEEEEEEEecC--CCC----CEEE--EEECC-CCCCCEEEEEEEEEecccccceeecCCc-ccccceecccce--eEE
Confidence            4678999999987  666    5675  45555 7899999999999999999999988433 345789999995  999


Q ss_pred             EEEecCCCCCCCCCCEEEEc---------------------------------------------------cccceeEee
Q 018404           86 AKVVDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYSLI  114 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v  114 (356)
                      |+++|++++++++||+|+..                                                   |+|+||+++
T Consensus        73 Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v  152 (198)
T d2jhfa1          73 VESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV  152 (198)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEE
T ss_pred             EEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEe
Confidence            99999999999999999652                                                   578999999


Q ss_pred             cCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEec
Q 018404          115 KNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSA  164 (356)
Q Consensus       115 ~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~g  164 (356)
                      ++.+ ++++ |++++++ .+++...++.+...+.   ..+++|++|.|..
T Consensus       153 ~~~~-~~~~-p~~~~~e-~l~~~~~~~~~v~~g~---~~l~~G~~VaVi~  196 (198)
T d2jhfa1         153 DEIS-VAKI-DAAFALD-PLITHVLPFEKINEGF---DLLRSGESIRTIL  196 (198)
T ss_dssp             EGGG-EEEC-CTTSCCG-GGEEEEEEGGGHHHHH---HHHHTTCCSEEEE
T ss_pred             CHHH-eEEC-CCCCCHH-HHHHHHHHHHhhhhCC---ceeeCCCEEEEEE
Confidence            9999 9999 8886665 3444444444444333   2367899988763

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.3e-21  Score=161.81  Aligned_cols=128  Identities=17%  Similarity=0.143  Sum_probs=102.9

Q ss_pred             ccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEEEEe
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVV   89 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V~~v   89 (356)
                      |||++...+  ++|    |++  .+++.| +|+++||||||.++|||++|++.+++......+|.|+|||+  +|+|+++
T Consensus         1 m~a~~~~~~--~~p----l~i--~ev~~P-~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~--~G~V~~v   69 (179)
T d1uufa1           1 IKAVGAYSA--KQP----LEP--MDITRR-EPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEI--VGRVVAV   69 (179)
T ss_dssp             CEEEEBSST--TSC----CEE--EECCCC-CCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCE--EEEEEEE
T ss_pred             CeEEEEccC--CCC----CEE--EEecCC-CCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccc--cccchhh
Confidence            789998887  777    455  567777 89999999999999999999998886555667899999996  9999999


Q ss_pred             cCCCCCCCCCCEEEE---------------------------------------ccccceeEeecCCCcceeecCCCCCc
Q 018404           90 DSGHPEFKKGDLVWG---------------------------------------TTGWEEYSLIKNPQGLFKIHHTDVPL  130 (356)
Q Consensus        90 G~~v~~~~~Gd~V~~---------------------------------------~g~~~~~~~v~~~~~l~~~~p~~~~~  130 (356)
                      |++|+++++||+|..                                       .|+|+||+++++.+ ++++ |+.  .
T Consensus        70 G~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~-~~~i-p~~--~  145 (179)
T d1uufa1          70 GDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERY-VLRI-RVA--D  145 (179)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGG-CEEC-CCC--C
T ss_pred             ccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHH-EEEC-CCC--C
Confidence            999999999999952                                       16799999999998 9999 755  2


Q ss_pred             cchhcccCcchHHHHHHHHHHcCCC
Q 018404          131 SYYTGILGMPGMTAWAGFYEICAPK  155 (356)
Q Consensus       131 ~~~~a~l~~~~~tA~~~l~~~~~~~  155 (356)
                      .  .+.+..++.++++++.. +.++
T Consensus       146 ~--~~~~a~~l~~a~~a~~~-a~v~  167 (179)
T d1uufa1         146 I--EMIRADQINEAYERMLR-GDVK  167 (179)
T ss_dssp             E--EEECGGGHHHHHHHHHT-TCSS
T ss_pred             c--ChhHhchhHHHHHHHHH-hCcc
Confidence            2  12233466788888843 4444

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.86  E-value=2.2e-24  Score=181.85  Aligned_cols=155  Identities=15%  Similarity=0.080  Sum_probs=115.7

Q ss_pred             ccEEEEeecccCCCCccceEEEEeeccccc----CCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404           10 NKQVILKNYVEGFPKETDMLVKASSISLKV----EEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus        10 ~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~----~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      +||++++.+  +     ++++++.++|...    .|+++||+|||.+++||++|++.+++.. ...+|.++|||+  +|+
T Consensus         2 ~kA~v~~~~--~-----~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~-~~~~P~v~GHE~--~G~   71 (201)
T d1kola1           2 NRGVVYLGS--G-----KVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT-TAQVGLVLGHEI--TGE   71 (201)
T ss_dssp             EEEEEEEET--T-----EEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS-CCCTTCBCCCCE--EEE
T ss_pred             cEEEEEeCC--C-----ceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCc-ccccceecccee--eee
Confidence            689999885  2     2456544443211    2357999999999999999999887433 356799999995  999


Q ss_pred             EEEecCCCCCCCCCCEEEEc----------------------------------------cccceeEeecCC-Ccceeec
Q 018404           86 AKVVDSGHPEFKKGDLVWGT----------------------------------------TGWEEYSLIKNP-QGLFKIH  124 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~----------------------------------------g~~~~~~~v~~~-~~l~~~~  124 (356)
                      |+++|++|++|++||||...                                        |+|+||+++|.. ..+++| 
T Consensus        72 Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~i-  150 (201)
T d1kola1          72 VIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKL-  150 (201)
T ss_dssp             EEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEEC-
T ss_pred             eeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEEC-
Confidence            99999999999999999621                                        689999999853 239999 


Q ss_pred             CCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC
Q 018404          125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC  182 (356)
Q Consensus       125 p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~  182 (356)
                      |++. ++.+++++...+.++++++.. ...+.++    +| +|++|+.++|+||.+||
T Consensus       151 Pd~~-~~~~~~~~~~~~~~~~~a~~~-~~~~~g~----~g-~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         151 PDRD-KAMEKINIAEVVGVQVISLDD-APRGYGE----FD-AGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             SCHH-HHHHTCCHHHHHTEEEECGGG-HHHHHHH----HH-HTCSCEEEECTTCSSCC
T ss_pred             CCCC-ChHHHHHHHHHHHHHHHHHHh-CCCCCeE----Ee-eCHHHHHHHHHHHHcCC
Confidence            8862 222566666666677766633 3334443    46 89999999999999886

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.85  E-value=1.2e-21  Score=164.90  Aligned_cols=140  Identities=15%  Similarity=0.142  Sum_probs=108.7

Q ss_pred             ccccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEE
Q 018404            6 EVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGV   85 (356)
Q Consensus         6 ~~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~   85 (356)
                      ...+|||++++++  |+|    |++++  +|.| +|+++||||||.++|||++|++.+++.. ...+|.++|||+  +|+
T Consensus         5 ~~~~~KAav~~~~--g~~----l~i~e--v~~P-~p~~~eVlVkv~a~gICgsDlh~~~G~~-~~~~P~i~GHE~--~G~   72 (198)
T d1p0fa1           5 KDITCKAAVAWEP--HKP----LSLET--ITVA-PPKAHEVRIKILASGICGSDSSVLKEII-PSKFPVILGHEA--VGV   72 (198)
T ss_dssp             SCEEEEEEEBSST--TSC----CEEEE--EEEC-CCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSBCCCCCE--EEE
T ss_pred             CceEEEEEEEccC--CCC----CEEEE--EECC-CCCCCEEEEEEEEEEEecccceeeeecc-ccccccccceee--eee
Confidence            4568999999987  777    56754  4555 7899999999999999999999887433 346799999996  899


Q ss_pred             EEEecCCCCCCCCCCEEEEc---------------------------------------------------cccceeEee
Q 018404           86 AKVVDSGHPEFKKGDLVWGT---------------------------------------------------TGWEEYSLI  114 (356)
Q Consensus        86 V~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v  114 (356)
                      |+++|+++.++++||+|...                                                   |+|+||+++
T Consensus        73 Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v  152 (198)
T d1p0fa1          73 VESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVV  152 (198)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEE
T ss_pred             eeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEe
Confidence            99999999999999999752                                                   468999999


Q ss_pred             cCCCcceeecCCCCCccchhcccCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHH
Q 018404          115 KNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQ  171 (356)
Q Consensus       115 ~~~~~l~~~~p~~~~~~~~~a~l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~  171 (356)
                      ++.. ++++ |++++++ .+++..+.+.+..          +++.|+|.| +|++|+
T Consensus       153 ~~~~-~~ki-p~~~~~~-~~~~~~~~~~~v~----------~~~~vlv~G-~G~iGl  195 (198)
T d1p0fa1         153 ADIA-VAKI-DPKINVN-FLVSTKLTLDQIN----------KAFELLSSG-QGVRSI  195 (198)
T ss_dssp             ETTS-EEEE-CTTSCGG-GGEEEEECGGGHH----------HHHHHTTTS-SCSEEE
T ss_pred             cHHH-EEEC-CCCCCHH-HHHHhhcchhhcC----------CCCEEEEEC-CCcceE
Confidence            9998 9999 8886665 3333333333322          334577777 677664

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.83  E-value=7.6e-20  Score=145.41  Aligned_cols=141  Identities=26%  Similarity=0.441  Sum_probs=108.2

Q ss_pred             cccccEEEEeecccCCCCccceEEEEeecccccCCCCCeEEEEEEEeecCHHhhhhhccCCCCCCCCCCCCCcceecEEE
Q 018404            7 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVA   86 (356)
Q Consensus         7 ~~~~~a~~~~~~~~g~p~~~~l~~~~~~~~~p~~~~~~evlV~v~~~~i~~~d~~~~~~~~~~~~~p~v~G~e~~~~G~V   86 (356)
                      |+++|+|++.++|.|.|++++|++++.++|   ++++||||||++|.++||..+..+.        +.-+|..+.|.|+.
T Consensus         1 M~~~k~~vl~~~P~G~P~~~~f~l~e~~ip---~~~~gevLvk~~~~svDp~~R~~~~--------~~~~g~~~~g~~vg   69 (147)
T d1v3va1           1 MVKAKSWTLKKHFQGKPTQSDFELKTVELP---PLKNGEVLLEALFLSVDPYMRIASK--------RLKEGAVMMGQQVA   69 (147)
T ss_dssp             CCEEEEEEESSCCCSSCCGGGEEEEEEECC---CCCTTCEEEEEEEEECCTHHHHHGG--------GSCTTSBCCCCEEE
T ss_pred             CcccEEEEEccCCCCCCcccceEEEEEECC---CCCCCEEEEEEEEEeEccccccccc--------ccccCCccccceEE
Confidence            457899999999999999899999877766   8899999999999999998776544        12223333334555


Q ss_pred             EEecCCCCCCCCCCEEEEccccceeEeecCCCcceeecCCCCCcc---c-hhcccCcchHHH-HHHHHHHcCCCCCCEEE
Q 018404           87 KVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHTDVPLS---Y-YTGILGMPGMTA-WAGFYEICAPKKGEYIY  161 (356)
Q Consensus        87 ~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~l~~~~p~~~~~~---~-~~a~l~~~~~tA-~~~l~~~~~~~~g~~Vl  161 (356)
                      ..++|++++|++||+|++.++|+||.+++... +.++ |+..+..   . ..+++...++|| |.+|.  ...+.|++|+
T Consensus        70 ~Vv~S~~~~f~~GD~V~g~~gw~ey~v~~~~~-l~kv-~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~Getvv  145 (147)
T d1v3va1          70 RVVESKNSAFPAGSIVLAQSGWTTHFISDGKG-LEKL-LTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLGKAVV  145 (147)
T ss_dssp             EEEEESCTTSCTTCEEEECCCSBSEEEECSSS-CEEC-CTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSSEEEE
T ss_pred             EEEEeCCCcccCCCEEEEccCCEeEEEeccce-eeEc-cccccccccchhhhHhccccchHHHHHHhh--CCCCCCCEEE
Confidence            55668889999999999999999999999999 9999 6543221   1 355677788884 54663  4457899998


Q ss_pred             E
Q 018404          162 V  162 (356)
Q Consensus       162 I  162 (356)
                      +
T Consensus       146 ~  146 (147)
T d1v3va1         146 T  146 (147)
T ss_dssp             E
T ss_pred             e
Confidence            7

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=1.5e-14  Score=100.50  Aligned_cols=70  Identities=29%  Similarity=0.347  Sum_probs=63.1

Q ss_pred             hhcccCcchHHHHHHHHH---HcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh
Q 018404          133 YTGILGMPGMTAWAGFYE---ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN  209 (356)
Q Consensus       133 ~~a~l~~~~~tA~~~l~~---~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~  209 (356)
                      ++++++.++.|||+++..   ....+++++|+|+||+|++|.+++|+++.+|++|+++++++++.          +.++ 
T Consensus         5 eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~----------~~~~-   73 (77)
T d1o8ca2           5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH----------EYLK-   73 (77)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH----------HHHH-
T ss_pred             HHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH----------HHHH-
Confidence            688999999999987653   35678999999999999999999999999999999999999998          9998 


Q ss_pred             hcCC
Q 018404          210 KFGF  213 (356)
Q Consensus       210 ~~g~  213 (356)
                      ++|+
T Consensus        74 ~lGA   77 (77)
T d1o8ca2          74 SLGA   77 (77)
T ss_dssp             HHTE
T ss_pred             HCCC
Confidence            8874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.25  E-value=1.7e-06  Score=73.47  Aligned_cols=105  Identities=23%  Similarity=0.392  Sum_probs=73.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      +|++++|+||++|+|.+.++.+...|++|+.++++++++          +.+.++++..   ..+|-.+.++..+.+.+.
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   72 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGA----------QAISDYLGANGKGLMLNVTDPASIESVLEKI   72 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------HHHHHHHGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHHHHhCCCCcEEEEEecCHHHhhhhhhhh
Confidence            488999999999999999999999999999999998887          5555455532   234444432333333332


Q ss_pred             C--CCCccEEEeCCCch--------------------------HHHHHHHhh--ccCCeEEEEccccc
Q 018404          233 F--PEGIDIYFEHVGGK--------------------------MLDAVLLNM--RLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~--~~~~d~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~  270 (356)
                      .  .|++|+++++.|..                          ..+.+++.|  +.+|++|.+++...
T Consensus        73 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  140 (243)
T d1q7ba_          73 RAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG  140 (243)
T ss_dssp             HHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             hcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh
Confidence            2  14799999998831                          225556666  34699999987544

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.19  E-value=5.8e-06  Score=70.35  Aligned_cols=108  Identities=19%  Similarity=0.263  Sum_probs=73.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++.++.      ++..+.+.++.|...   ..|-.+++++.+.+.+.
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~------~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   77 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEA------SEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV   77 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999998876      223333433556532   23444432333333332


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEcccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMIS  269 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~  269 (356)
                      ..  |++|+++++.|..                          ..+.+++.|.+  +|++|.++...
T Consensus        78 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~  144 (251)
T d1vl8a_          78 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT  144 (251)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGG
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccch
Confidence            21  3799999999831                          22556667744  58999998743

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=5e-06  Score=70.44  Aligned_cols=108  Identities=17%  Similarity=0.203  Sum_probs=74.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .|++++|+||++|+|.+.+..+...|++|+.++++++++      +++++.++ +.|..   ...|..+.++....+++.
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l------~~~~~~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i   78 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGL------EETAAKCK-GLGAKVHTFVVDCSNREDIYSSAKKV   78 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            589999999999999999999999999999999999887      44445555 55543   233545442333333333


Q ss_pred             C--CCCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          233 F--PEGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       233 ~--~~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      .  .|.+|+++++.|..                          ..+.+++.|.+  .|++|.++....
T Consensus        79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          79 KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             HHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            2  23799999999931                          12445555644  478999987654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=6.9e-06  Score=70.16  Aligned_cols=84  Identities=24%  Similarity=0.363  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-CEE----EecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DDA----FNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~v----v~~~~~~~~~~~~~  230 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.+.++++++      +++.++++ +.+. ..+    .|-.++++..+.+.
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l------~~~~~~l~-~~~~~~~~~~~~~Dls~~~~v~~~v~   81 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI------EELAAECK-SAGYPGTLIPYRCDLSNEEDILSMFS   81 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCSSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCCceEEEEEccCCCHHHHHHHHH
Confidence            478999999999999999999999999999999998876      44445555 4442 222    24444323333333


Q ss_pred             HhCC--CCccEEEeCCCc
Q 018404          231 RCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~  246 (356)
                      +...  +++|+++++.|.
T Consensus        82 ~~~~~~g~iD~lVnnAg~   99 (257)
T d1xg5a_          82 AIRSQHSGVDICINNAGL   99 (257)
T ss_dssp             HHHHHHCCCSEEEECCCC
T ss_pred             HHHHhcCCCCEEEecccc
Confidence            3221  479999999983

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.17  E-value=5.3e-06  Score=71.01  Aligned_cols=108  Identities=19%  Similarity=0.253  Sum_probs=73.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|++++..+...|++|+.++++++++      +++.+.++ +.|...   ..|-.+.+++.+.+.+.
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l------~~~~~~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~   76 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREAL------EKAEASVR-EKGVEARSYVCDVTSEEAVIGTVDSV   76 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-TTTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            588999999999999999999999999999999998876      34445555 555432   23444432333333332


Q ss_pred             CC--CCccEEEeCCCc-h--------------------------HHHHHHHhh--ccCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGG-K--------------------------MLDAVLLNM--RLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~-~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~  270 (356)
                      ..  |++|+++++.|. .                          ..+.+++.+  +.+|++|.++....
T Consensus        77 ~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  145 (260)
T d1zema1          77 VRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG  145 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhh
Confidence            21  479999998882 1                          124444444  45799999987654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.16  E-value=5.3e-06  Score=70.48  Aligned_cols=105  Identities=14%  Similarity=0.143  Sum_probs=74.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~  233 (356)
                      -+|+++||+||++|+|.+.++.+...|++|+.+.++++..          +.++ +.+... .+|-.+.++..+.+.+..
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~----------~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   71 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK----------EVAE-AIGGAFFQVDLEDERERVRFVEEAA   71 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH----------HHHH-HHTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHH-HcCCeEEEEeCCCHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999988775          6555 666532 234444323333333322


Q ss_pred             C--CCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEccccc
Q 018404          234 P--EGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMISQ  270 (356)
Q Consensus       234 ~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  270 (356)
                      .  |++|+++++.|..                          ..+.+++.|++  +|++|.++....
T Consensus        72 ~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          72 YALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             HhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            1  3799999998831                          12455666654  589999987654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.14  E-value=7.2e-06  Score=69.85  Aligned_cols=105  Identities=17%  Similarity=0.174  Sum_probs=73.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE---ecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF---NYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv---~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++++          +.+.++++.....   |..+.++..+.+.+.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   74 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG----------QQLAAELGERSMFVRHDVSSEADWTLVMAAV   74 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHHHHHCTTEEEECCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhCCCeEEEEeecCCHHHHHHHHHHH
Confidence            588999999999999999999999999999999988877          5555477654322   333332333222222


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhc-cCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMR-LHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~  270 (356)
                      ..  +++|+++++.|..                          ..+.+++.|+ .+|++|.++....
T Consensus        75 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          75 QRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             HHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             HHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            21  4799999999831                          1245566665 4799999998655

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.13  E-value=4.8e-06  Score=71.02  Aligned_cols=105  Identities=15%  Similarity=0.153  Sum_probs=72.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|++.++.+...|++|+.++++++++          +.+.++++..   ...|-.++++..+.+.+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   73 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG----------AATARELGDAARYQHLDVTIEEDWQRVVAYA   73 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHTTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhCCceEEEEcccCCHHHHHHHHHHH
Confidence            588999999999999999999999999999999998876          5554366642   223444432333333322


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhh--ccCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNM--RLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~  270 (356)
                      ..  +++|+++++.|..                          ..+.+++.+  +++|++|.++....
T Consensus        74 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~  141 (254)
T d1hdca_          74 REEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh
Confidence            11  3799999998831                          123444444  33699999998655

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.12  E-value=2.4e-05  Score=66.69  Aligned_cols=108  Identities=12%  Similarity=0.171  Sum_probs=73.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHH---HH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDA---AL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~---~~  229 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++++      +++.++++ +.+...   ..|-.+.++..+   .+
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l------~~~~~~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKEL------NDCLTQWR-SKGFKVEASVCDLSSRSERQELMNTV   79 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCCceEEEeeCCCHHHHHHHHHHH
Confidence            589999999999999999999999999999999988876      33334444 445422   234444323333   33


Q ss_pred             HHhCCCCccEEEeCCCch--------------------------HHHHHHHhh--ccCCeEEEEccccc
Q 018404          230 KRCFPEGIDIYFEHVGGK--------------------------MLDAVLLNM--RLHGRIAACGMISQ  270 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~  270 (356)
                      .+..++.+|+++++.|..                          ..+.+++.+  ..+|++|.++....
T Consensus        80 ~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  148 (259)
T d2ae2a_          80 ANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG  148 (259)
T ss_dssp             HHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG
T ss_pred             HHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc
Confidence            333344799999999831                          124445555  34699999988654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.08  E-value=1.1e-05  Score=63.36  Aligned_cols=100  Identities=16%  Similarity=0.174  Sum_probs=75.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .-+|+|+| .|.+|+.+++.|+.+|++|.+.+.+.+++          +.+++.++.. ..+...+. .+.+.+++    
T Consensus        32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l----------~~l~~~~~~~~~~~~~~~~-~l~~~~~~----   95 (168)
T d1pjca1          32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERL----------SYLETLFGSRVELLYSNSA-EIETAVAE----   95 (168)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHGGGSEEEECCHH-HHHHHHHT----
T ss_pred             CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHH----------HHHHHhhcccceeehhhhh-hHHHhhcc----
Confidence            46899999 89999999999999999999999999998          7777444432 23322222 45555553    


Q ss_pred             CccEEEeCCCch-------HHHHHHHhhccCCeEEEEccccccCC
Q 018404          236 GIDIYFEHVGGK-------MLDAVLLNMRLHGRIAACGMISQYNL  273 (356)
Q Consensus       236 ~~d~vid~~g~~-------~~~~~~~~l~~~G~~v~~g~~~~~~~  273 (356)
                       .|+||-++=-.       .-+.+++.|+|++.+|++..-.+.+.
T Consensus        96 -aDivI~aalipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG~~  139 (168)
T d1pjca1          96 -ADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCV  139 (168)
T ss_dssp             -CSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSB
T ss_pred             -CcEEEEeeecCCcccCeeecHHHHhhcCCCcEEEEeecCCCCcc
Confidence             89999876521       34799999999999999987555443

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.08  E-value=7.4e-06  Score=69.69  Aligned_cols=108  Identities=16%  Similarity=0.306  Sum_probs=72.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      .++.+||+||++|+|.+.++.+...|++|+.++++++++      +++.+.++ +.|..   ...|-.+++++.+.+.+.
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l------~~~~~~l~-~~g~~~~~~~~Dvt~~~~v~~~~~~~   81 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC------DSVVDEIK-SFGYESSGYAGDVSKKEEISEVINKI   81 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHH------HHHHHHHH-TTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999989999999999988876      33444555 55543   223444432333333322


Q ss_pred             C--CCCccEEEeCCCch--------------------------HHHHHHHhh--ccCCeEEEEccccc
Q 018404          233 F--PEGIDIYFEHVGGK--------------------------MLDAVLLNM--RLHGRIAACGMISQ  270 (356)
Q Consensus       233 ~--~~~~d~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~  270 (356)
                      .  -|++|+++++.|..                          ..+.+++.+  .++|++|.+++..+
T Consensus        82 ~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  149 (251)
T d2c07a1          82 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG  149 (251)
T ss_dssp             HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             HHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHh
Confidence            1  24799999988831                          124444445  44699999987544

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.07  E-value=1.6e-05  Score=64.54  Aligned_cols=84  Identities=19%  Similarity=0.192  Sum_probs=59.3

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-CEEEecCCcccHHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DDAFNYKEENDLDAALK  230 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~  230 (356)
                      ..--+|++|+|+||+|++|.++++.+...|++|+.++++.++.      +++.+.+.+.... ...+|..+.    +.+.
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~d~~~~----~~~~   87 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKA------QAAADSVNKRFKVNVTAAETADD----ASRA   87 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH------HHHHHHHHHHHTCCCEEEECCSH----HHHH
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHH------HHHHHHHHhccchhhhhhhcccH----HHHH
Confidence            3345789999999999999999999999999999999998886      2333333322333 234555442    2344


Q ss_pred             HhCCCCccEEEeCCCc
Q 018404          231 RCFPEGIDIYFEHVGG  246 (356)
Q Consensus       231 ~~~~~~~d~vid~~g~  246 (356)
                      +.. +++|++|++.|.
T Consensus        88 ~~~-~~iDilin~Ag~  102 (191)
T d1luaa1          88 EAV-KGAHFVFTAGAI  102 (191)
T ss_dssp             HHT-TTCSEEEECCCT
T ss_pred             HHh-cCcCeeeecCcc
Confidence            433 359999999874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.06  E-value=2.7e-05  Score=66.36  Aligned_cols=108  Identities=14%  Similarity=0.215  Sum_probs=70.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHH---HHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLD---AAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~---~~~  229 (356)
                      +|+++||+||++|+|.++++.+...|++|+.++++++++      ++..+.++ +.+..   ...|..+.++..   +.+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l------~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYEL------NECLSKWQ-KKGFQVTGSVCDASLRPEREKLMQTV   79 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCceEEEeccCCCHHHHHHHHHHH
Confidence            589999999999999999999999999999999998876      23333344 33332   223444432333   333


Q ss_pred             HHhCCCCccEEEeCCCch--------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          230 KRCFPEGIDIYFEHVGGK--------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      .+..++.+|+++++.|..                          ..+.+++.|+  .+|++|.++....
T Consensus        80 ~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  148 (259)
T d1xq1a_          80 SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG  148 (259)
T ss_dssp             HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred             HHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence            333345699999999831                          1234444553  4689999987554

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=4.5e-06  Score=72.07  Aligned_cols=104  Identities=18%  Similarity=0.325  Sum_probs=69.6

Q ss_pred             CCEE-EEecCCchHHHHHHH-HHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCccc---HHHH
Q 018404          157 GEYI-YVSAASGAVGQLVGQ-FAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEEND---LDAA  228 (356)
Q Consensus       157 g~~V-lI~ga~g~vG~~ai~-la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~---~~~~  228 (356)
                      |.+| ||+||++|+|+++++ |++..|++|+.++++.++.      +++.+.++ +.+.. .  .+|-.+.++   +.+.
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~------~~~~~~l~-~~~~~~~~~~~Dvs~~~sv~~~~~~   74 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRG------QAAVQQLQ-AEGLSPRFHQLDIDDLQSIRALRDF   74 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHH------HHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEEecCCHHHHHHHHHH
Confidence            5666 899999999998875 5666699999999998887      33444555 44432 2  234444322   3333


Q ss_pred             HHHhCCCCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEccc
Q 018404          229 LKRCFPEGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  268 (356)
                      +.+.. +++|+++++.|..                          ..+.++..|+++|+++.++..
T Consensus        75 ~~~~~-g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          75 LRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             HHHHH-SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             HHHhc-CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            43332 3799999999831                          124455667889999998864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.05  E-value=8.7e-06  Score=69.46  Aligned_cols=80  Identities=14%  Similarity=0.222  Sum_probs=59.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      +|++++|+||++|+|++.++.+...|++|+.++++.+++          +.+.+++|...   ..|-.+.++..+.+.+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l----------~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~   73 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAA----------RATAAEIGPAACAIALDVTDQASIDRCVAEL   73 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHH----------HHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhCCceEEEEeeCCCHHHHHHHHHHH
Confidence            488999999999999999999999999999999998876          55554777542   23444432333333332


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  |++|+++++.|
T Consensus        74 ~~~~g~iDilVnnAg   88 (256)
T d1k2wa_          74 LDRWGSIDILVNNAA   88 (256)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHhCCccEEEeecc
Confidence            22  47999999988

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.02  E-value=5.7e-06  Score=70.00  Aligned_cols=80  Identities=10%  Similarity=0.179  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~~~~~  234 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++++          +.+.++++... .+|-.+.+++.+.+.+...
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l----------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPL----------REAAEAVGAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHTTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHcCCeEEEEecCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999998887          66654666632 3454443233333332221


Q ss_pred             --CCccEEEeCCC
Q 018404          235 --EGIDIYFEHVG  245 (356)
Q Consensus       235 --~~~d~vid~~g  245 (356)
                        +++|+++++.|
T Consensus        74 ~~g~iDilVnnAG   86 (242)
T d1ulsa_          74 HLGRLDGVVHYAG   86 (242)
T ss_dssp             HHSSCCEEEECCC
T ss_pred             hcCCceEEEECCc
Confidence              37999999988

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.5e-05  Score=67.83  Aligned_cols=109  Identities=17%  Similarity=0.164  Sum_probs=71.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-C---EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-D---DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~---~vv~~~~~~~~~~~~~~  231 (356)
                      .|+++||+||++|+|.++++.+...|++|+.++++.+++      +++.+.+.++.+. .   ...|-.+.+++.+.+.+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~------~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAG------VQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRK   75 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHH
Confidence            588999999999999999999999999999999998876      2222223212221 1   12344443233333333


Q ss_pred             hCC--CCccEEEeCCCch------------------HHHHHHHhhcc-----CCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGGK------------------MLDAVLLNMRL-----HGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~------------------~~~~~~~~l~~-----~G~~v~~g~~~~  270 (356)
                      ...  |++|+++++.|..                  ..+.+++.|.+     +|++|.++...+
T Consensus        76 ~~~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~  139 (254)
T d2gdza1          76 VVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  139 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             HHHHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence            322  3799999999941                  12445555543     488999988655

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=8.6e-06  Score=68.96  Aligned_cols=103  Identities=15%  Similarity=0.157  Sum_probs=72.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~~  233 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++++          +.+.++++..  ..+|-.+.+...+.+.++ 
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l----------~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-   74 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----------DSLVRECPGIEPVCVDLGDWEATERALGSV-   74 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHSTTCEEEECCTTCHHHHHHHHTTC-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH----------HHHHHhcCCCeEEEEeCCCHHHHHHHHHHh-
Confidence            689999999999999999999999999999999998887          5555455542  234555542333333322 


Q ss_pred             CCCccEEEeCCCch--------------------------HHHHHHHh-hc--cCCeEEEEccccc
Q 018404          234 PEGIDIYFEHVGGK--------------------------MLDAVLLN-MR--LHGRIAACGMISQ  270 (356)
Q Consensus       234 ~~~~d~vid~~g~~--------------------------~~~~~~~~-l~--~~G~~v~~g~~~~  270 (356)
                       +++|+++++.|..                          ..+.+++. ++  .+|+++.++....
T Consensus        75 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~  139 (244)
T d1pr9a_          75 -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS  139 (244)
T ss_dssp             -CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             -CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccc
Confidence             4799999988831                          12444543 33  3689999987654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.00  E-value=3e-05  Score=66.05  Aligned_cols=109  Identities=15%  Similarity=0.159  Sum_probs=70.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc-CCC---EEEecCCcccHHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF-GFD---DAFNYKEENDLDAALKR  231 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~---~vv~~~~~~~~~~~~~~  231 (356)
                      +|++++|+||++|+|.+.++.+...|++|+.++++.+++      +++.+.+.+.. +..   ...|-.+.+++...+.+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l------~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~   76 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGL------EASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA   76 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999998876      22223333122 222   12244443233333333


Q ss_pred             hCC--CCccEEEeCCCc-h--------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          232 CFP--EGIDIYFEHVGG-K--------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~-~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      ...  |++|+++++.|. .                          ..+.++..++  .+|++|.++....
T Consensus        77 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  146 (258)
T d1iy8a_          77 TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG  146 (258)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             HHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhh
Confidence            221  379999998872 1                          1134444443  5699999998655

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.97  E-value=3.3e-05  Score=67.35  Aligned_cols=114  Identities=20%  Similarity=0.186  Sum_probs=73.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccc---hhHHHHHHHhhcCCCEEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPM---QSQLVELLKNKFGFDDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+.++.+...|++|++.+++.+.......   .+++.+.+. ..+.....|..+.++..+.+.+.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-RRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH-HTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh-hcccccccccchHHHHHHHHHHH
Confidence            48899999999999999999999999999998776543211111   123333444 44444556665542333333332


Q ss_pred             C--CCCccEEEeCCCch--------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          233 F--PEGIDIYFEHVGGK--------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       233 ~--~~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      .  -|++|+++++.|..                          ..+.++..|+  .+|++|.++...+
T Consensus        85 ~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~  152 (302)
T d1gz6a_          85 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  152 (302)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence            2  24799999999821                          2245566664  4589999987543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.97  E-value=1.1e-05  Score=68.13  Aligned_cols=78  Identities=14%  Similarity=0.124  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~~  233 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++++          +.+.++.+..  ..+|-.+.+.+.+.+.++ 
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l----------~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-   72 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL----------VSLAKECPGIEPVCVDLGDWDATEKALGGI-   72 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHSTTCEEEECCTTCHHHHHHHHTTC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHhcCCCeEEEEeCCCHHHHHHHHHHc-
Confidence            589999999999999999999999999999999998876          5554355432  233444442333333332 


Q ss_pred             CCCccEEEeCCC
Q 018404          234 PEGIDIYFEHVG  245 (356)
Q Consensus       234 ~~~~d~vid~~g  245 (356)
                       |++|+++++.|
T Consensus        73 -g~iDilVnnAg   83 (242)
T d1cyda_          73 -GPVDLLVNNAA   83 (242)
T ss_dssp             -CCCSEEEECCC
T ss_pred             -CCCeEEEECCc
Confidence             47999999988

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.96  E-value=1.9e-05  Score=67.03  Aligned_cols=104  Identities=13%  Similarity=0.137  Sum_probs=70.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--C-E--EEecCCccc---HHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--D-D--AFNYKEEND---LDA  227 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~-~--vv~~~~~~~---~~~  227 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++.+++          +.+.++++.  . .  ..|-.+.++   +.+
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVG----------EKAAKSVGTPDQIQFFQHDSSDEDGWTKLFD   74 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhCCCCcEEEEEccCCCHHHHHHHHH
Confidence            488999999999999999999999999999999998876          544434432  1 1  224444322   223


Q ss_pred             HHHHhCCCCccEEEeCCCch--------------------------HHHHHHHhhcc---CCeEEEEccccc
Q 018404          228 ALKRCFPEGIDIYFEHVGGK--------------------------MLDAVLLNMRL---HGRIAACGMISQ  270 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~~---~G~~v~~g~~~~  270 (356)
                      .+.+.. |++|+++++.|..                          ..+.+++.|.+   +|++|.++...+
T Consensus        75 ~~~~~~-G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~  145 (251)
T d1zk4a1          75 ATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG  145 (251)
T ss_dssp             HHHHHH-SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG
T ss_pred             HHHHHh-CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccce
Confidence            333322 4799999999831                          12455556644   358888887654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.96  E-value=3e-05  Score=66.14  Aligned_cols=111  Identities=16%  Similarity=0.194  Sum_probs=71.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc-hhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE-KVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAALK  230 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~  230 (356)
                      -+|+++||+||++|+|++.++.+...|++|+.+.+++. ..      +++.+.+.++.|....   .|-.+.++..+.+.
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~------~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~   75 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEI------EKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVD   75 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHH------HHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHH------HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            36889999999999999999999999999999998754 33      2233334324454322   24444323333333


Q ss_pred             HhCC--CCccEEEeCCCch--------------------------HHHHHHHhhcc--CCeEEEEcccccc
Q 018404          231 RCFP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRL--HGRIAACGMISQY  271 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~  271 (356)
                      +...  |++|+++++.|..                          ..+.+++.|.+  +|++|.++.....
T Consensus        76 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  146 (260)
T d1x1ta1          76 NAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL  146 (260)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce
Confidence            2221  3799999999831                          12445556644  5899999876553

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.96  E-value=1.7e-05  Score=67.65  Aligned_cols=109  Identities=22%  Similarity=0.291  Sum_probs=73.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKR  231 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~  231 (356)
                      -.|+++||+||++|+|.+.++.+...|++|+.+.++.++.     .+++.++++ +.|...   ..|..+.++..+.+.+
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~-----~~~~~~~~~-~~g~~~~~~~~D~~~~~~v~~~~~~   77 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKA-----AEEVVAELK-KLGAQGVAIQADISKPSEVVALFDK   77 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-----HHHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHH-----HHHHHHHHH-HcCCCceEecCCCCCHHHHHHHHHH
Confidence            4589999999999999999999999999999877665542     133445555 666542   2244333233333332


Q ss_pred             hCC--CCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEcccc
Q 018404          232 CFP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       232 ~~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      ...  +++|+++.+.|..                          ..+.++..|+++|+++.+....
T Consensus        78 ~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~  143 (259)
T d1ja9a_          78 AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA  143 (259)
T ss_dssp             HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             HHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccc
Confidence            221  3799999999831                          2366677888888888776643

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.95  E-value=2.9e-05  Score=65.76  Aligned_cols=106  Identities=15%  Similarity=0.180  Sum_probs=70.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.+++++++.        ..+.++ +.|...   ..|-.+.++....+.+.
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--------~~~~~~-~~g~~~~~~~~Dvs~~~~v~~~~~~~   74 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--------AEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQV   74 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--------HHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--------HHHHHH-HcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999876542        224445 666532   23444432333333332


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      ..  |++|+++++.|..                          ..+.+++.|+  .+|++|.+++...
T Consensus        75 ~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~  142 (247)
T d2ew8a1          75 ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY  142 (247)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence            21  4799999999831                          1234455553  3589999987654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.95  E-value=3.4e-05  Score=65.75  Aligned_cols=84  Identities=15%  Similarity=0.280  Sum_probs=61.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCccc---HHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEEND---LDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~---~~~~~  229 (356)
                      +|+++||+||++++|.+.++.+...|++|+.++++++++      +++.+.++ +.+...   .+|..+.++   +.+.+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l------~~~~~~~~-~~~~~~~~~~~D~s~~~~~~~~~~~~   77 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKEL------DECLEIWR-EKGLNVEGSVCDLLSRTERDKLMQTV   77 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCCceEEEeecCCHHHHHHHHHHH
Confidence            689999999999999999999999999999999998776      33344555 555532   234444322   33344


Q ss_pred             HHhCCCCccEEEeCCCc
Q 018404          230 KRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~  246 (356)
                      .+..++.+|+++.+.|.
T Consensus        78 ~~~~~g~idilinnag~   94 (258)
T d1ae1a_          78 AHVFDGKLNILVNNAGV   94 (258)
T ss_dssp             HHHTTSCCCEEEECCCC
T ss_pred             HHHhCCCcEEEeccccc
Confidence            45555579999998883

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.91  E-value=3.1e-05  Score=65.30  Aligned_cols=104  Identities=11%  Similarity=0.135  Sum_probs=73.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++++|.+.++-+...|++|+.+.++.+++          +.+.++++...   ..|-.++++..+.+.+.
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i   73 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLL----------AEAVAALEAEAIAVVADVSDPKAVEAVFAEA   73 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHTCCSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHcCCceEEEEecCCCHHHHHHHHHHH
Confidence            588999999999999999999999999999999998876          55554777542   23444432333333333


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEcccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      ..  +++|+++.+.|..                          ..+..++.+..++.++.++..+
T Consensus        74 ~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a  138 (241)
T d2a4ka1          74 LEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  138 (241)
T ss_dssp             HHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             HHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc
Confidence            22  3799999988831                          1245566777788877776544

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=1.2e-05  Score=68.60  Aligned_cols=84  Identities=19%  Similarity=0.322  Sum_probs=59.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++++      +++.++++ +.|...   ..|-.++++..+.+.+.
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------~~~~~~l~-~~g~~~~~~~~Dvs~~~~~~~~~~~~   82 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA------NHVVDEIQ-QLGGQAFACRCDITSEQELSALADFA   82 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-HcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            589999999999999999999999999999999988876      44445565 555432   23444432333222222


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  |++|+++++.|.
T Consensus        83 ~~~~g~iDilvnnAG~   98 (255)
T d1fmca_          83 ISKLGKVDILVNNAGG   98 (255)
T ss_dssp             HHHHSSCCEEEECCCC
T ss_pred             HHHcCCCCEeeeCCcC
Confidence            21  379999999883

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.90  E-value=1e-05  Score=68.45  Aligned_cols=106  Identities=17%  Similarity=0.159  Sum_probs=73.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++++|.+.++.+...|++|+.++++++++          +.+.++++..   ...|-.++++..+.+++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   74 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG----------KAMAAELADAARYVHLDVTQPAQWKAAVDTA   74 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhhCcceEEEeecCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999998887          5555466532   123444432333333333


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhc--cCCeEEEEcccccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMR--LHGRIAACGMISQY  271 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~~  271 (356)
                      ..  +++|+++++.|..                          ..+.+++.+.  .+|++|.++.....
T Consensus        75 ~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  143 (244)
T d1nffa_          75 VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL  143 (244)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccc
Confidence            22  3799999999831                          1133444443  46899999886553

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.90  E-value=4.1e-05  Score=65.69  Aligned_cols=108  Identities=20%  Similarity=0.294  Sum_probs=73.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE---EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA---FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.+.++.++.     -+++.+.++ +.+....   .|..+++++.+.+.+.
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~-----~~~~~~~~~-~~g~~~~~~~~D~~~~~~v~~~~~~~   90 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTES-----AEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEA   90 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-----HHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHH-----HHHHHHHHH-hhCCceeeEeCCCCCHHHHHHHHHHH
Confidence            489999999999999999999999999999998775432     123334555 5565432   2333432333333333


Q ss_pred             CC--CCccEEEeCCCch--------------------------HHHHHHHhhccCCeEEEEcccc
Q 018404          233 FP--EGIDIYFEHVGGK--------------------------MLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       233 ~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      ..  +++|+++.+.|..                          ..+.+++.|.++|+++.++...
T Consensus        91 ~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~  155 (272)
T d1g0oa_          91 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT  155 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred             HHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence            22  3799999988831                          2366677888899999887644

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.89  E-value=4.8e-06  Score=70.20  Aligned_cols=99  Identities=12%  Similarity=0.161  Sum_probs=66.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCC--c---ccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE--E---NDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~--~---~~~~~~~~  230 (356)
                      +|++|||+||++|+|.+.++.+...|++|+.+++.+.+.          . .     ....+....  .   +.+...+.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~----------~-~-----~~~~~~~~~~~~~~~~~~~~~~~   64 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE----------A-S-----ASVIVKMTDSFTEQADQVTAEVG   64 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT----------S-S-----EEEECCCCSCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------c-c-----ccceeecccCcHHHHHHHHHHHH
Confidence            478999999999999999999999999999998765542          1 0     001111111  0   12233333


Q ss_pred             HhCCC-CccEEEeCCCc-h--------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          231 RCFPE-GIDIYFEHVGG-K--------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       231 ~~~~~-~~d~vid~~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      +..+. ++|+++++.|. .                          ..+.+++.|+++|+++.++....
T Consensus        65 ~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          65 KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             HHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence            33333 79999998872 1                          12445667889999999988654

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.87  E-value=0.00012  Score=62.32  Aligned_cols=103  Identities=21%  Similarity=0.286  Sum_probs=71.9

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  227 (356)
                      ...++++|++||=.| + |.|..++.+|+..+  .+|++++.+++..      +.+.+.++ .+|....+..... +.  
T Consensus        97 ~~l~i~pG~~VLDiG-~-GsG~lt~~lA~~~~~~G~V~~vD~~~~~~------~~A~~~~~-~~g~~~~v~~~~~-d~--  164 (266)
T d1o54a_          97 MMLDVKEGDRIIDTG-V-GSGAMCAVLARAVGSSGKVFAYEKREEFA------KLAESNLT-KWGLIERVTIKVR-DI--  164 (266)
T ss_dssp             HHTTCCTTCEEEEEC-C-TTSHHHHHHHHHTTTTCEEEEECCCHHHH------HHHHHHHH-HTTCGGGEEEECC-CG--
T ss_pred             HhhCCCCCCEEEECC-C-CCCHHHHHHHHHhCCCcEEEEEeCCHHHH------HHHHHHHH-HhccccCcEEEec-cc--
Confidence            568999999999998 3 44788889999885  6999999998876      33334444 5665322222111 21  


Q ss_pred             HHHHhCCC-CccEEEeCCCc--hHHHHHHHhhccCCeEEEEc
Q 018404          228 ALKRCFPE-GIDIYFEHVGG--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       228 ~~~~~~~~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                        ...... .+|.||--...  ..+..+.+.|+|+|+++.+.
T Consensus       165 --~~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         165 --SEGFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             --GGCCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             --cccccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence              122223 78888776665  58899999999999998763

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=1.5e-05  Score=67.58  Aligned_cols=105  Identities=13%  Similarity=0.167  Sum_probs=72.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHHHHHHhC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~~~~  233 (356)
                      +|+++||+||++++|.+.++.+...|++|+.++++++++          +.+.++.+...  ..|-.+.++..+.+.+..
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~----------~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   74 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----------RALEQELPGAVFILCDVTQEDDVKTLVSETI   74 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHhcCCCeEEEccCCCHHHHHHHHHHHH
Confidence            589999999999999999999999999999999998887          66664554322  234444323333333322


Q ss_pred             C--CCccEEEeCCCc-h--------------------------HHHHHHHhhcc-CCeEEEEccccc
Q 018404          234 P--EGIDIYFEHVGG-K--------------------------MLDAVLLNMRL-HGRIAACGMISQ  270 (356)
Q Consensus       234 ~--~~~d~vid~~g~-~--------------------------~~~~~~~~l~~-~G~~v~~g~~~~  270 (356)
                      .  +++|+++++.|. .                          ..+.+++.|++ +|+++.++....
T Consensus        75 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~  141 (250)
T d1ydea1          75 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG  141 (250)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH
T ss_pred             HhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc
Confidence            2  379999999882 1                          12444555544 589999987544

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.86  E-value=1.1e-05  Score=69.68  Aligned_cols=80  Identities=21%  Similarity=0.284  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.++++.+...|++|+.++++++++          +.+.++++..   ...|..+.++..+.+.+.
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l----------~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   73 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERL----------AELETDHGDNVLGIVGDVRSLEDQKQAASRC   73 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHcCCCeeEEecccccHHHHHHHHHHH
Confidence            589999999999999999999999999999999998887          5555466643   223444432333333322


Q ss_pred             CC--CCccEEEeCCC
Q 018404          233 FP--EGIDIYFEHVG  245 (356)
Q Consensus       233 ~~--~~~d~vid~~g  245 (356)
                      ..  +++|+++++.|
T Consensus        74 ~~~~g~idilvnnAG   88 (276)
T d1bdba_          74 VARFGKIDTLIPNAG   88 (276)
T ss_dssp             HHHHSCCCEEECCCC
T ss_pred             HHHhCCccccccccc
Confidence            21  37999999887

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.82  E-value=2.3e-05  Score=67.42  Aligned_cols=84  Identities=15%  Similarity=0.281  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--C----EEEecCCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--D----DAFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~----~vv~~~~~~~~~~~~  229 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++++      +++.++++ +.+.  .    ...|-.+.+++...+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l------~~~~~~l~-~~~~~~~~~~~~~~Dvs~~~~v~~~~   76 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERL------EETRQIIL-KSGVSEKQVNSVVADVTTEDGQDQII   76 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-TTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCCCCceEEEEccCCCHHHHHHHH
Confidence            478999999999999999999999999999999998876      33334444 4442  1    223444432333333


Q ss_pred             HHhCC--CCccEEEeCCCc
Q 018404          230 KRCFP--EGIDIYFEHVGG  246 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g~  246 (356)
                      .+...  |++|+++++.|.
T Consensus        77 ~~~~~~~g~iDilvnnAG~   95 (272)
T d1xkqa_          77 NSTLKQFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHhCCceEEEeCCcc
Confidence            33222  379999999873

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.82  E-value=1.9e-05  Score=67.47  Aligned_cols=84  Identities=13%  Similarity=0.151  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.++++.+...|++|+.+.++.+++      +++.+.+.++.|..   ...|-.++++....+.+.
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~------~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA------VEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH------HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999998876      22223333255653   223444432333333322


Q ss_pred             C--CCCccEEEeCCC
Q 018404          233 F--PEGIDIYFEHVG  245 (356)
Q Consensus       233 ~--~~~~d~vid~~g  245 (356)
                      .  -+++|+++++.|
T Consensus        82 ~~~~g~iDilVnnAg   96 (260)
T d1h5qa_          82 DADLGPISGLIANAG   96 (260)
T ss_dssp             HHHSCSEEEEEECCC
T ss_pred             HHHhCCCcEeccccc
Confidence            1  247999999988

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.81  E-value=2.6e-05  Score=66.39  Aligned_cols=82  Identities=16%  Similarity=0.255  Sum_probs=57.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHhC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRCF  233 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~~  233 (356)
                      |+.+||+||++|+|.+.++.+...|++|+.++++++++      ++..++++ +.|...   ..|-.+.+++.+.+.+..
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l------~~~~~~l~-~~g~~~~~~~~Dvs~~~~v~~~~~~~~   74 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGL------RTTLKELR-EAGVEADGRTCDVRSVPEIEALVAAVV   74 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            67789999999999999999999999999999998876      34445555 556532   234444323333333221


Q ss_pred             --CCCccEEEeCCC
Q 018404          234 --PEGIDIYFEHVG  245 (356)
Q Consensus       234 --~~~~d~vid~~g  245 (356)
                        -+++|+++++.|
T Consensus        75 ~~~g~iDilVnnAG   88 (257)
T d2rhca1          75 ERYGPVDVLVNNAG   88 (257)
T ss_dssp             HHTCSCSEEEECCC
T ss_pred             HHhCCCCEEEeccc
Confidence              147999999988

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.80  E-value=2.7e-05  Score=66.96  Aligned_cols=83  Identities=16%  Similarity=0.275  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC------EEEecCCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD------DAFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------~vv~~~~~~~~~~~~  229 (356)
                      +|++++|+||++|+|.+.++.+...|++|+.++++++++      +++.++++ +.+..      ...|-.+.++..+.+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l------~~~~~~i~-~~~~~~~~~~~~~~Dv~~~~~v~~~~   75 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRL------EETKQQIL-KAGVPAEKINAVVADVTEASGQDDII   75 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-HcCCCCcceEEEEeeCCCHHHHHHHH
Confidence            488999999999999999999999999999999998876      34444555 44431      123444432333333


Q ss_pred             HHhCC--CCccEEEeCCC
Q 018404          230 KRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g  245 (356)
                      .+...  |++|+++++.|
T Consensus        76 ~~~~~~~G~iDilVnnAG   93 (274)
T d1xhla_          76 NTTLAKFGKIDILVNNAG   93 (274)
T ss_dssp             HHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHcCCceEEEeecc
Confidence            32221  37999999887

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.80  E-value=2.2e-05  Score=67.36  Aligned_cols=105  Identities=17%  Similarity=0.239  Sum_probs=70.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC---CE--EEecCCcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF---DD--AFNYKEENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~--vv~~~~~~~~~~~~~  230 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++++          +.+.++++.   ..  ..|-.+.+++...+.
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~----------~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~   74 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHG----------QKVCNNIGSPDVISFVHCDVTKDEDVRNLVD   74 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhcCCCceEEEEccCCCHHHHHHHHH
Confidence            588999999999999999999999999999999998887          544435442   11  224444323333333


Q ss_pred             HhCC--CCccEEEeCCCc-h---------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          231 RCFP--EGIDIYFEHVGG-K---------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~-~---------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      +...  +.+|+++++.|. .                           ..+.+++.|.  .+|+++.++....
T Consensus        75 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~  146 (268)
T d2bgka1          75 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS  146 (268)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG
T ss_pred             HHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccc
Confidence            2221  379999998882 1                           1245555663  4589988876544

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=6.9e-05  Score=64.13  Aligned_cols=40  Identities=30%  Similarity=0.400  Sum_probs=37.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      -+|+++||+||++|+|++++..+...|++|+.++++++++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l   51 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETL   51 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            4689999999999999999999999999999999998887

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.76  E-value=2.9e-05  Score=66.35  Aligned_cols=83  Identities=13%  Similarity=0.203  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC------EEEecCCcccHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD------DAFNYKEENDLDAAL  229 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------~vv~~~~~~~~~~~~  229 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++++      +++.++++ +.+..      ...|..+.++..+.+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l------~~~~~~l~-~~~~~~~~~~~~~~Dvt~~~~v~~~~   76 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERL------EETRQQIL-AAGVSEQNVNSVVADVTTDAGQDEIL   76 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCCcCceEEEEccCCCHHHHHHHH
Confidence            578999999999999999999999999999999998876      33444454 44421      123444432333333


Q ss_pred             HHhCC--CCccEEEeCCC
Q 018404          230 KRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~~--~~~d~vid~~g  245 (356)
                      .+...  |++|+++++.|
T Consensus        77 ~~~~~~~g~iDilvnnAG   94 (264)
T d1spxa_          77 STTLGKFGKLDILVNNAG   94 (264)
T ss_dssp             HHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHhCCCCEeecccc
Confidence            33221  47999999987

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.74  E-value=0.00013  Score=57.80  Aligned_cols=105  Identities=14%  Similarity=0.082  Sum_probs=74.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE-ecCC-c------------
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF-NYKE-E------------  222 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv-~~~~-~------------  222 (356)
                      .-+|+|+| .|.+|+.|+..|+.+|++|.+.+.+.+++          +.++ +++...+- ++.. .            
T Consensus        29 pa~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~----------~~l~-~l~~~~i~~~~~~~~~~~~~~gyA~~~   96 (183)
T d1l7da1          29 PARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATK----------EQVE-SLGGKFITVDDEAMKTAETAGGYAKEM   96 (183)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTH----------HHHH-HTTCEECCC------------------
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHH----------HHHH-HhhcceEEEeccccccccccccchhhc
Confidence            35899999 89999999999999999999999999998          8888 77653220 0000 0            


Q ss_pred             -----ccHHHHHHHhCCCCccEEEeCCCc---h----HHHHHHHhhccCCeEEEEccccccCCC
Q 018404          223 -----NDLDAALKRCFPEGIDIYFEHVGG---K----MLDAVLLNMRLHGRIAACGMISQYNLS  274 (356)
Q Consensus       223 -----~~~~~~~~~~~~~~~d~vid~~g~---~----~~~~~~~~l~~~G~~v~~g~~~~~~~~  274 (356)
                           ....+.+.+... ..|+||-++=-   +    .-+.+++.|+|++.+|++....+.+.+
T Consensus        97 s~~~~~~~~~~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~E  159 (183)
T d1l7da1          97 GEEFRKKQAEAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCP  159 (183)
T ss_dssp             -----CCHHHHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSST
T ss_pred             CHHHHHHHHHHHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCccc
Confidence                 012223333222 48999986542   1    347899999999999999876655443

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.74  E-value=8.3e-05  Score=62.65  Aligned_cols=104  Identities=18%  Similarity=0.262  Sum_probs=68.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-cchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHH---HHHH
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS-REKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDA---ALKR  231 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~---~~~~  231 (356)
                      .|||+||++|+|++.++.+...|++|+.++++ ++..      +++.+.++ +.|..   ...|-.+.++..+   .+.+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~------~~~~~~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAA------EEVSKQIE-AYGGQAITFGGDVSKEADVEAMMKTAID   75 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH------HHHHHHHH-HHTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH------HHHHHHHH-HcCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999887654 4443      33445555 55642   2234444323333   3333


Q ss_pred             hCCCCccEEEeCCCch--------------------------HHHHHHHhh--ccCCeEEEEccccc
Q 018404          232 CFPEGIDIYFEHVGGK--------------------------MLDAVLLNM--RLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~~~~~~d~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~  270 (356)
                      .. |++|+++++.|..                          ..+.+++.|  +.+|++|.++...+
T Consensus        76 ~~-g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  141 (244)
T d1edoa_          76 AW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG  141 (244)
T ss_dssp             HS-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             Hc-CCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhh
Confidence            32 4799999998831                          124556666  45799999987554

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=2.7e-05  Score=65.83  Aligned_cols=78  Identities=19%  Similarity=0.291  Sum_probs=58.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~~~  234 (356)
                      +|+++||+||++++|.+.++.+...|++|+.++++++++          +.+.+..+.. .+.|.... +..+.+.+.. 
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l----------~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-   72 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL----------QELEKYPGIQTRVLDVTKK-KQIDQFANEV-   72 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------GGGGGSTTEEEEECCTTCH-HHHHHHHHHC-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH----------HHHHhccCCceeeeecccc-cccccccccc-
Confidence            588999999999999999999999999999999998887          6665344442 33344433 4444444443 


Q ss_pred             CCccEEEeCCC
Q 018404          235 EGIDIYFEHVG  245 (356)
Q Consensus       235 ~~~d~vid~~g  245 (356)
                      +++|+++++.|
T Consensus        73 ~~id~lVn~ag   83 (245)
T d2ag5a1          73 ERLDVLFNVAG   83 (245)
T ss_dssp             SCCSEEEECCC
T ss_pred             ccceeEEeccc
Confidence            36999999988

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.73  E-value=3.8e-05  Score=66.65  Aligned_cols=85  Identities=11%  Similarity=0.235  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-E--EecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-A--FNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v--v~~~~~~~~~~~~~~~  232 (356)
                      +|+++||+||++|+|.+++..+...|++|+.+.++.++.      +++.+.+..+.|... .  .|..+.+.....+...
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l------~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~   97 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVL------KATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL   97 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH------HHHHHHHHHhcCCceEEEEecccChHHHHHHhhhh
Confidence            478999999999999999999999999999999998876      233334432445432 2  2333331222222222


Q ss_pred             C--CCCccEEEeCCCc
Q 018404          233 F--PEGIDIYFEHVGG  246 (356)
Q Consensus       233 ~--~~~~d~vid~~g~  246 (356)
                      .  .+++|+++++.|.
T Consensus        98 ~~~~g~iDilvnnAg~  113 (294)
T d1w6ua_          98 IKVAGHPNIVINNAAG  113 (294)
T ss_dssp             HHHTCSCSEEEECCCC
T ss_pred             hhhccccchhhhhhhh
Confidence            1  2479999999883

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.71  E-value=4.4e-05  Score=65.14  Aligned_cols=85  Identities=18%  Similarity=0.228  Sum_probs=57.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRC  232 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~  232 (356)
                      +|++++|+||++++|.+.++.+...|++|+.+.++.+..     -+++.++++ +.|...   ..|-.++++..+.+.+.
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~-----~~~~~~~~~-~~g~~~~~~~~Dvt~~~~v~~~~~~~   79 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE-----ANSVLEEIK-KVGGEAIAVKGDVTVESDVINLVQSA   79 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-----HHHHHHHHH-HTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHH-----HHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999876532     133345555 666532   23444432333333322


Q ss_pred             CC--CCccEEEeCCCc
Q 018404          233 FP--EGIDIYFEHVGG  246 (356)
Q Consensus       233 ~~--~~~d~vid~~g~  246 (356)
                      ..  |++|+++++.|.
T Consensus        80 ~~~~G~iDiLVnnAG~   95 (261)
T d1geea_          80 IKEFGKLDVMINNAGL   95 (261)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHhCCCCEeecccee
Confidence            21  379999999883

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.71  E-value=9.2e-05  Score=62.75  Aligned_cols=108  Identities=18%  Similarity=0.109  Sum_probs=67.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE----EEecC-CcccHHHHHH
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD----AFNYK-EENDLDAALK  230 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----vv~~~-~~~~~~~~~~  230 (356)
                      +|++|||+||++|+|++++..+...|++|++++++.++.      +++.+... ..+-..    ..|.. +..++.+.+.
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~   76 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP------TALAELKA-INPKVNITFHTYDVTVPVAESKKLLK   76 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH------HHHHHHHH-HCTTSEEEEEECCTTSCHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccH------HHHHHHHh-hCCCCCEEEEEeecCCCHHHHHHHHH
Confidence            488999999999999999999999999999998877664      11222222 333222    22332 2112322233


Q ss_pred             HhCC--CCccEEEeCCCc-h-----------------HHHHHHHhhcc-----CCeEEEEccccc
Q 018404          231 RCFP--EGIDIYFEHVGG-K-----------------MLDAVLLNMRL-----HGRIAACGMISQ  270 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g~-~-----------------~~~~~~~~l~~-----~G~~v~~g~~~~  270 (356)
                      +...  +++|+++.+.|. +                 ..+.+++.|.+     +|+++.++...+
T Consensus        77 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~  141 (254)
T d1sbya1          77 KIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             HHHHHcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence            2222  379999999995 1                 12444555533     588999887655

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.67  E-value=0.00013  Score=61.77  Aligned_cols=105  Identities=14%  Similarity=0.105  Sum_probs=66.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      ++||+||++++|++.+..+...|++|+..+++.++.      +++..... .+....+.+..+...+.+.+.+.. |++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~------~~~~~~~~-~~~~~dv~~~~~~~~~~~~~~~~~-G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQK------DELEAFAE-TYPQLKPMSEQEPAELIEAVTSAY-GQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH------HHHHHHHH-HCTTSEECCCCSHHHHHHHHHHHH-SCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHhhhC-cEEEeccCCHHHHHHHHHHHHHHc-CCCC
Confidence            789999999999999999999999999999887776      22222222 333333333322113333333332 4799


Q ss_pred             EEEeCCCc-h--------------------------HHHHHHHhhcc--CCeEEEEcccccc
Q 018404          239 IYFEHVGG-K--------------------------MLDAVLLNMRL--HGRIAACGMISQY  271 (356)
Q Consensus       239 ~vid~~g~-~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~  271 (356)
                      +++++.|. .                          ..+.+++.|++  +|++|.++.....
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~  135 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF  135 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccc
Confidence            99987762 1                          11344445533  6999999886553

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.66  E-value=7.4e-05  Score=62.81  Aligned_cols=104  Identities=13%  Similarity=0.139  Sum_probs=68.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCE-------EEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHH-
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCY-------VVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDA-  227 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~-------Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~-  227 (356)
                      .|||+||++|+|++.+..+...|++       |+..+++.+++      +++.++++ +.|...   ..|-.+.++..+ 
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l------~~~~~~~~-~~g~~~~~~~~Dvt~~~~v~~~   75 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADL------EKISLECR-AEGALTDTITADISDMADVRRL   75 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHH------HHHHHHHH-TTTCEEEEEECCTTSHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHH------HHHHHHHH-hcCCcEEEEEecCCCHHHHHHH
Confidence            4799999999999999888888886       88888888876      33334444 455421   224444323333 


Q ss_pred             --HHHHhCCCCccEEEeCCCch--------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          228 --ALKRCFPEGIDIYFEHVGGK--------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       228 --~~~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                        .+.+.. |++|+++++.|..                          ..+.+++.|+  .+|+++.++....
T Consensus        76 ~~~~~~~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  147 (240)
T d2bd0a1          76 TTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  147 (240)
T ss_dssp             HHHHHHHT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHHHHHc-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence              333322 3799999998831                          1245566664  3689999987654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=7.1e-05  Score=65.03  Aligned_cols=85  Identities=15%  Similarity=0.248  Sum_probs=57.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc----CCCE---EEecCCcccHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF----GFDD---AFNYKEENDLDA  227 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~---vv~~~~~~~~~~  227 (356)
                      -+|+++||+||++|+|.++++.+...|++|++++++.+++      ++..++++..+    +...   ..|-.+.++..+
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l------~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~   83 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERL------KSAADELQANLPPTKQARVIPIQCNIRNEEEVNN   83 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHHhhhccccCceEEEEeccCCCHHHHHH
Confidence            4689999999999999999999999999999999998876      22333343222    2221   224444323333


Q ss_pred             HHHHhCC--CCccEEEeCCC
Q 018404          228 ALKRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       228 ~~~~~~~--~~~d~vid~~g  245 (356)
                      .+.+...  +++|+++++.|
T Consensus        84 ~~~~~~~~~G~iDiLVnnAg  103 (297)
T d1yxma1          84 LVKSTLDTFGKINFLVNNGG  103 (297)
T ss_dssp             HHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHhCCeEEEEeecc
Confidence            3333221  37999999988

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.64  E-value=6.1e-05  Score=63.93  Aligned_cols=80  Identities=14%  Similarity=0.176  Sum_probs=55.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHHHHHhC--
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAALKRCF--  233 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~~~~--  233 (356)
                      .+||+||++|+|++.+..+...|++|+.++++++++      +++.++++ +.|...   ..|-.+.++..+.+.+..  
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l------~~~~~~i~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATA------KAVASEIN-QAGGHAVAVKVDVSDRDQVFAAVEQARKT   75 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH------HHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHHHHHH-hcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            569999999999999999888999999999998876      34445555 555432   234444323333333221  


Q ss_pred             CCCccEEEeCCC
Q 018404          234 PEGIDIYFEHVG  245 (356)
Q Consensus       234 ~~~~d~vid~~g  245 (356)
                      -|++|+++++.|
T Consensus        76 ~g~iDilVnnAG   87 (255)
T d1gega_          76 LGGFDVIVNNAG   87 (255)
T ss_dssp             TTCCCEEEECCC
T ss_pred             hCCccEEEeccc
Confidence            147999999988

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.64  E-value=9.5e-05  Score=62.70  Aligned_cols=107  Identities=19%  Similarity=0.206  Sum_probs=67.2

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE--ecCCcccHH---HH
Q 018404          156 KGEYIYVSAASG--AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF--NYKEENDLD---AA  228 (356)
Q Consensus       156 ~g~~VlI~ga~g--~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~---~~  228 (356)
                      +|+++||+||+|  |+|.+.++.+...|++|+.+.++++..      ++..+... ..+....+  |..+.++..   +.
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~------~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLR------PEAEKLAE-ALGGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGH------HHHHHHHH-HTTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHH------HHHHHhhh-ccCcccccccccCCHHHHHHHHHH
Confidence            588999999887  899999999999999999888876543      11122222 44433333  333332222   22


Q ss_pred             HHHhCCCCccEEEeCCCch---------------HH---------------HHHHHhhccCCeEEEEccccc
Q 018404          229 LKRCFPEGIDIYFEHVGGK---------------ML---------------DAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      +.+.. +++|+++++.|..               .+               +.+...++++|+++.++....
T Consensus        80 ~~~~~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~  150 (256)
T d1ulua_          80 VKEAF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS  150 (256)
T ss_dssp             HHHHH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred             HHHhc-CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence            23322 4799999988731               01               223345677899998887554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.63  E-value=1.5e-05  Score=67.02  Aligned_cols=98  Identities=15%  Similarity=0.136  Sum_probs=64.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc-----ccHHHHHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE-----NDLDAALKR  231 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~-----~~~~~~~~~  231 (356)
                      +.+|||+||++|+|.+.++.+...|++|+.+++++++.          ...      ...+.....     ....+.+..
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~------~~~~~~~~~~~~~~~~~~~~~~~   65 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADS------NILVDGNKNWTEQEQSILEQTAS   65 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSE------EEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccc------cceeccccCchhHHHHHHHHHHH
Confidence            35799999999999999999999999999999886653          100      011111110     011222222


Q ss_pred             h-CCCCccEEEeCCCc-h--------------------------HHHHHHHhhccCCeEEEEccccc
Q 018404          232 C-FPEGIDIYFEHVGG-K--------------------------MLDAVLLNMRLHGRIAACGMISQ  270 (356)
Q Consensus       232 ~-~~~~~d~vid~~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  270 (356)
                      . ..+++|+++++.|. .                          ..+.++..|+++|+++.++....
T Consensus        66 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~  132 (235)
T d1ooea_          66 SLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  132 (235)
T ss_dssp             HHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             HhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence            2 23479999999882 1                          12455667888999999987654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.62  E-value=5.1e-05  Score=62.55  Aligned_cols=111  Identities=17%  Similarity=0.184  Sum_probs=74.6

Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY  219 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~  219 (356)
                      +...|. ++ +..++++|++||..|  +|.|+.++-+++..|.+|+++...++-.      +.+.+.++ ++|.+.+.-.
T Consensus        64 P~~~a~-ml-~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~------~~a~~~l~-~~g~~nv~~~  132 (215)
T d1jg1a_          64 PHMVAI-ML-EIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELV------EFAKRNLE-RAGVKNVHVI  132 (215)
T ss_dssp             HHHHHH-HH-HHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHH------HHHHHHHH-HTTCCSEEEE
T ss_pred             hhhHHH-HH-HhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHH------HHHHHHHH-HcCCceeEEE
Confidence            433343 45 457899999999998  6778888999998898899999886654      23334455 6776543322


Q ss_pred             CCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          220 KEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      ..  +..+-..+  .+.||.|+.+.+- ..-...++.|+++|+++..
T Consensus       133 ~g--d~~~g~~~--~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         133 LG--DGSKGFPP--KAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             ES--CGGGCCGG--GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             EC--ccccCCcc--cCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            22  11111111  1379999987666 4446788999999999864

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.59  E-value=0.00018  Score=60.89  Aligned_cols=89  Identities=16%  Similarity=0.196  Sum_probs=58.9

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCE---EEecCCcccHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---AFNYKEENDLDAA  228 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~  228 (356)
                      ..+|+.++||+||+||+|++.++.+-..|+ +|+.+.++....   +...++.+.++ ..|...   ..|..+..+..+.
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~---~~~~~~~~~l~-~~g~~v~~~~~Dv~d~~~~~~~   80 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA---DGAGELVAELE-ALGARTTVAACDVTDRESVREL   80 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS---TTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCH---HHHHHHHHHHH-hccccccccccccchHHHHHHh
Confidence            468889999999999999999998888898 677777764332   22233445555 566532   2244443233333


Q ss_pred             HHHhCCC-CccEEEeCCC
Q 018404          229 LKRCFPE-GIDIYFEHVG  245 (356)
Q Consensus       229 ~~~~~~~-~~d~vid~~g  245 (356)
                      +.+.... ++|.++.+.|
T Consensus        81 ~~~i~~~~~i~~vv~~ag   98 (259)
T d2fr1a1          81 LGGIGDDVPLSAVFHAAA   98 (259)
T ss_dssp             HHTSCTTSCEEEEEECCC
T ss_pred             hccccccccccccccccc
Confidence            4443333 7899999988

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.55  E-value=0.00013  Score=61.69  Aligned_cols=79  Identities=14%  Similarity=0.133  Sum_probs=55.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhhcCCC-E--EEecCCccc---HHHH
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-D--AFNYKEEND---LDAA  228 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~---~~~~  228 (356)
                      .++|||+||++|+|+++++.+...|+  +|+.++++.+++          +.+++..+.. +  .+|..+.++   +.+.
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~----------~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~   72 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA----------TELKSIKDSRVHVLPLTVTCDKSLDTFVSK   72 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC----------HHHHTCCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHH----------HHHHHhhCCceEEEEEecCCHHHHHHHHHH
Confidence            47999999999999999988877886  799999999888          7777333332 2  234444322   3334


Q ss_pred             HHHhCCC-CccEEEeCCC
Q 018404          229 LKRCFPE-GIDIYFEHVG  245 (356)
Q Consensus       229 ~~~~~~~-~~d~vid~~g  245 (356)
                      +.+..+. ++|+++++.|
T Consensus        73 i~~~~~~~~idilinnAG   90 (250)
T d1yo6a1          73 VGEIVGSDGLSLLINNAG   90 (250)
T ss_dssp             HHHHHGGGCCCEEEECCC
T ss_pred             HHHHhCCCCeEEEEEcCc
Confidence            4443333 6999999998

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.54  E-value=0.00019  Score=59.95  Aligned_cols=72  Identities=25%  Similarity=0.318  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHhCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRCFP  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~~~  234 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.++++++.+          +    +.+...+ .|..+  ... .+.+.. 
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l----------~----~~~~~~~~~Dv~~--~~~-~~~~~~-   64 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----------K----RSGHRYVVCDLRK--DLD-LLFEKV-   64 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------H----HTCSEEEECCTTT--CHH-HHHHHS-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------H----hcCCcEEEcchHH--HHH-HHHHHh-
Confidence            578999999999999999999999999999999886554          3    4444322 23322  333 333333 


Q ss_pred             CCccEEEeCCC
Q 018404          235 EGIDIYFEHVG  245 (356)
Q Consensus       235 ~~~d~vid~~g  245 (356)
                      +.+|+++++.|
T Consensus        65 g~iD~lVnnAG   75 (234)
T d1o5ia_          65 KEVDILVLNAG   75 (234)
T ss_dssp             CCCSEEEECCC
T ss_pred             CCCcEEEeccc
Confidence            36999999988

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.50  E-value=6.3e-05  Score=63.14  Aligned_cols=75  Identities=12%  Similarity=0.144  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC-
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP-  234 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~-  234 (356)
                      +|+++||+||++|+|.+.++.+...|++|+.+.++++..          +.+.     ...+|..+.++..+.+.+... 
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~-----~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------KGLF-----GVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSE-----EEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------cCce-----EEEEecCCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999987775          3221     123444443233322322221 


Q ss_pred             -CCccEEEeCCC
Q 018404          235 -EGIDIYFEHVG  245 (356)
Q Consensus       235 -~~~d~vid~~g  245 (356)
                       +++|+++++.|
T Consensus        71 ~g~iDiLVnnAG   82 (237)
T d1uzma1          71 QGPVEVLVSNAG   82 (237)
T ss_dssp             HSSCSEEEEECS
T ss_pred             cCCceEEEeeec
Confidence             37999999988

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.49  E-value=0.001  Score=51.74  Aligned_cols=73  Identities=19%  Similarity=0.258  Sum_probs=56.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      -.+.+|+|.| +|.+|..+++.+...|+ +++++.|+.++.          +.+.+++|.. .+++.   ++.+.+.+  
T Consensus        22 l~~~~ilviG-aG~~g~~v~~~L~~~g~~~i~v~nRt~~ka----------~~l~~~~~~~-~~~~~---~~~~~l~~--   84 (159)
T d1gpja2          22 LHDKTVLVVG-AGEMGKTVAKSLVDRGVRAVLVANRTYERA----------VELARDLGGE-AVRFD---ELVDHLAR--   84 (159)
T ss_dssp             CTTCEEEEES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHH----------HHHHHHHTCE-ECCGG---GHHHHHHT--
T ss_pred             cccCeEEEEC-CCHHHHHHHHHHHhcCCcEEEEEcCcHHHH----------HHHHHhhhcc-cccch---hHHHHhcc--
Confidence            4578999999 69999999999999998 788999988886          5555488753 33332   45555554  


Q ss_pred             CCCccEEEeCCCch
Q 018404          234 PEGIDIYFEHVGGK  247 (356)
Q Consensus       234 ~~~~d~vid~~g~~  247 (356)
                         +|+||.|++.+
T Consensus        85 ---~Divi~atss~   95 (159)
T d1gpja2          85 ---SDVVVSATAAP   95 (159)
T ss_dssp             ---CSEEEECCSSS
T ss_pred             ---CCEEEEecCCC
Confidence               89999999873

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.44  E-value=0.00016  Score=59.42  Aligned_cols=105  Identities=17%  Similarity=0.190  Sum_probs=69.4

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCccc
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEND  224 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  224 (356)
                      ++ +..++++|++||-.|  .|.|..++.+++..|  .+|++++.+++..      +.+.+.++ ..+...+.-...  +
T Consensus        67 ~l-~~l~l~~g~~VLdiG--~GtG~~s~~la~~~~~~g~V~~id~~~~~~------~~a~~~~~-~~~~~n~~~~~~--d  134 (213)
T d1dl5a1          67 FM-EWVGLDKGMRVLEIG--GGTGYNAAVMSRVVGEKGLVVSVEYSRKIC------EIAKRNVE-RLGIENVIFVCG--D  134 (213)
T ss_dssp             HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESCHHHH------HHHHHHHH-HTTCCSEEEEES--C
T ss_pred             HH-HhhhccccceEEEec--CccchhHHHHHHHhCCCCcEEEeecchhhH------HHhhhhHh-hhcccccccccC--c
Confidence            44 567899999999999  344888889999886  4899999888776      22333334 445532221111  1


Q ss_pred             HHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          225 LDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      ..+.+.  ..+.||+|+.+.+- ......++.|+|+|+++..
T Consensus       135 ~~~~~~--~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         135 GYYGVP--EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             GGGCCG--GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             hHHccc--cccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            111111  11369999987776 3446788999999999863

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=0.00034  Score=60.18  Aligned_cols=106  Identities=16%  Similarity=0.191  Sum_probs=65.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEE---eCCcchhccccchhHHHHHHHhhc---CCC---EEEecCCcccHHHH
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGS---AGSREKVWLIPMQSQLVELLKNKF---GFD---DAFNYKEENDLDAA  228 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~---~~~~~~~~~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~  228 (356)
                      ..|||+||++|+|.+++..+...|++|+.+   .++.+..      +++.+.++ +.   +..   ..+|..+.++....
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~------~~l~~~~~-~~~~~~~~~~~~~~Dv~~~~~~~~~   75 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ------GRLWEAAR-ALACPPGSLETLQLDVRDSKSVAAA   75 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGT------HHHHHHHH-HTTCCTTSEEEEECCTTCHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhh------HHHHHHHH-HHhccCCceEEEeccccchHhhhhh
Confidence            356899999999999999998899875444   4443332      23333343 33   222   22355554344444


Q ss_pred             HHHhCCCCccEEEeCCCch--------------------------HHHHHHHhhc--cCCeEEEEccccc
Q 018404          229 LKRCFPEGIDIYFEHVGGK--------------------------MLDAVLLNMR--LHGRIAACGMISQ  270 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  270 (356)
                      +.+...+.+|+++++.|..                          ..+.++..|.  .+|++|.+++..+
T Consensus        76 ~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g  145 (285)
T d1jtva_          76 RERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG  145 (285)
T ss_dssp             HHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred             hhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh
Confidence            5554445899999988831                          1244455553  3699999987655

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.40  E-value=0.0015  Score=55.17  Aligned_cols=102  Identities=15%  Similarity=0.077  Sum_probs=70.1

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHh---hcC---CCEE-Ee
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKN---KFG---FDDA-FN  218 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g---~~~v-v~  218 (356)
                      +....+++||++||=.|  .|.|.++..||+..|.  +|+.++.+++..          +.+++   .++   .+.+ +.
T Consensus        88 Ii~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~----------~~Ar~n~~~~~~~~~~nv~~~  155 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHA----------EHARRNVSGCYGQPPDNWRLV  155 (264)
T ss_dssp             HHHHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHH----------HHHHHHHHHHHTSCCTTEEEE
T ss_pred             HHHHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHH----------HHHHHhhhhhccCCCceEEEE
Confidence            33568999999999988  5678999999999864  999999998887          44442   221   1221 21


Q ss_pred             cCCcccHHHHHHHhCCCCccEEEeCCCc--hHHHHHHHhhccCCeEEEEc
Q 018404          219 YKEENDLDAALKRCFPEGIDIYFEHVGG--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ..   +..+  ..+..+.+|.||-....  ..+..+.+.|+|+|+++.+-
T Consensus       156 ~~---d~~~--~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         156 VS---DLAD--SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             CS---CGGG--CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ec---cccc--ccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            11   1111  01112379987765655  68899999999999998763

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00041  Score=60.64  Aligned_cols=106  Identities=12%  Similarity=0.129  Sum_probs=65.3

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhhcC-----------CCEE
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNKFG-----------FDDA  216 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~~~v  216 (356)
                      ...+++||++||=.|  .|.|.+++.||+..|.  +|+.++.+++..      +.+.+.++ +++           .+.+
T Consensus        92 ~~l~i~pG~rVLE~G--tGsG~lt~~LAr~vg~~G~V~t~E~~~~~~------~~A~~n~~-~~~~~~~~~~~~~~~~nv  162 (324)
T d2b25a1          92 SMMDINPGDTVLEAG--SGSGGMSLFLSKAVGSQGRVISFEVRKDHH------DLAKKNYK-HWRDSWKLSHVEEWPDNV  162 (324)
T ss_dssp             HHHTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESSHHHH------HHHHHHHH-HHHHHHTTTCSSCCCCCE
T ss_pred             HHhCCCCCCEEEEec--ccccHHHHHHHHHhCCCcEEEEecCCHHHH------HHHHHHHH-Hhhhhhhhhhhhccccce
Confidence            567899999999988  3559999999999875  899999998876      11222232 221           0111


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCc--hHHHHHHHhhccCCeEEEEc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGG--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                       +.... ++.........+.+|.||--...  ..+..+.+.|+|||+++.+-
T Consensus       163 -~~~~~-di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         163 -DFIHK-DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             -EEEES-CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             -eEEec-chhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence             11110 11111111112268887744444  58899999999999998764

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.31  E-value=0.00049  Score=57.78  Aligned_cols=81  Identities=14%  Similarity=0.217  Sum_probs=51.8

Q ss_pred             CEEEEecCCchHHHHHHHHHH---HcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHH---HH
Q 018404          158 EYIYVSAASGAVGQLVGQFAK---LMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDA---AL  229 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~---~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~---~~  229 (356)
                      ++|||+||++|+|+++++.+.   ..|++|+.+++++++.      +++++..+ ..+--  ..+|..+.++..+   .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i   75 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA------KELEDLAK-NHSNIHILEIDLRNFDAYDKLVADI   75 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC------HHHHHHHH-HCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHH------HHHHHHHh-cCCcEEEEEEEeccHHHHHHHHhhh
Confidence            489999999999999886553   3589999999998886      22222222 22221  2234444323333   33


Q ss_pred             HHhCC-CCccEEEeCCC
Q 018404          230 KRCFP-EGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~~-~~~d~vid~~g  245 (356)
                      ++... +++|+++++.|
T Consensus        76 ~~~~~~~~iDiLvnNAg   92 (248)
T d1snya_          76 EGVTKDQGLNVLFNNAG   92 (248)
T ss_dssp             HHHHGGGCCSEEEECCC
T ss_pred             HHHhhcCCcceEEeecc
Confidence            33333 37999999887

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.23  E-value=0.00035  Score=58.70  Aligned_cols=102  Identities=9%  Similarity=0.087  Sum_probs=67.7

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCC-CEEEecCCcccHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DDAFNYKEENDLD  226 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~  226 (356)
                      ...+++||++||=.|  .|.|.++..+|+..|  .+|++++.+++..      +.+.+.++ +++. ..+ +.... ++.
T Consensus        79 ~~l~i~pG~rVLEiG--~GsG~lt~~la~~v~~~g~V~~vD~~e~~~------~~A~~n~~-~~~~~~nv-~~~~~-Di~  147 (250)
T d1yb2a1          79 MRCGLRPGMDILEVG--VGSGNMSSYILYALNGKGTLTVVERDEDNL------KKAMDNLS-EFYDIGNV-RTSRS-DIA  147 (250)
T ss_dssp             --CCCCTTCEEEEEC--CTTSHHHHHHHHHHTTSSEEEEECSCHHHH------HHHHHHHH-TTSCCTTE-EEECS-CTT
T ss_pred             HHcCCCCcCEEEEee--eeCcHHHHHHHHHhCCCcEEEEEECCHHHH------HHHHHHHH-HhcCCCce-EEEEe-eee
Confidence            457899999999998  344788888999875  4999999998876      22223333 3332 222 22121 221


Q ss_pred             HHHHHhCCC-CccEEEeCCCc--hHHHHHHHhhccCCeEEEEc
Q 018404          227 AALKRCFPE-GIDIYFEHVGG--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       227 ~~~~~~~~~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                          +.... .+|.||--...  ..+..+.+.|+|||+++.+.
T Consensus       148 ----~~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         148 ----DFISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             ----TCCCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ----cccccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence                22223 79988855544  58899999999999998764

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.22  E-value=0.0011  Score=57.08  Aligned_cols=104  Identities=11%  Similarity=0.053  Sum_probs=70.1

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHH
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLD  226 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~  226 (356)
                      -+....++++|++||=+|  .|.|-.+..+|+..|++|++++.++++.      +...+.++ +.|....+..... ++ 
T Consensus        52 ~~~~~l~l~~G~~VLDiG--CG~G~~~~~~a~~~g~~v~git~s~~q~------~~a~~~~~-~~~l~~~v~~~~~-d~-  120 (291)
T d1kpia_          52 LALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQY------AHDKAMFD-EVDSPRRKEVRIQ-GW-  120 (291)
T ss_dssp             HHHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHH------HHHHHHHH-HSCCSSCEEEEEC-CG-
T ss_pred             HHHHhcCCCCCCEEEEec--CcchHHHHHHHHhcCcceeeccchHHHH------HHHHHHHH-hhccchhhhhhhh-cc-
Confidence            344668899999999998  4566678899999999999999998876      12223344 5565322222111 21 


Q ss_pred             HHHHHhCCCCccEEEe-----CCCc-----------hHHHHHHHhhccCCeEEEE
Q 018404          227 AALKRCFPEGIDIYFE-----HVGG-----------KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid-----~~g~-----------~~~~~~~~~l~~~G~~v~~  265 (356)
                          ....+.||.|+.     .++.           ..++.+.+.|+|+|+++.-
T Consensus       121 ----~~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~  171 (291)
T d1kpia_         121 ----EEFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH  171 (291)
T ss_dssp             ----GGCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEE
T ss_pred             ----cccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEE
Confidence                122347998864     3332           3578899999999999853

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.00079  Score=53.04  Aligned_cols=103  Identities=11%  Similarity=0.012  Sum_probs=64.0

Q ss_pred             HHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH
Q 018404          146 AGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL  225 (356)
Q Consensus       146 ~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  225 (356)
                      .+|....-..+|++|+|+| +||.+.+++.-+..+|++|+.+.|+.++.          +.+.+.+.....+..-.. + 
T Consensus         7 ~~l~~~~~~~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka----------~~l~~~~~~~~~~~~~~~-~-   73 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRA----------EELAKLFAHTGSIQALSM-D-   73 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHH----------HHHHHHTGGGSSEEECCS-G-
T ss_pred             HHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHH----------HHHHHHHhhccccccccc-c-
Confidence            4455554456789999999 89999999999999999999999998887          555434432111111111 0 


Q ss_pred             HHHHHHhCCCCccEEEeCCCchHHH----HHHHhhccCCeEEEEc
Q 018404          226 DAALKRCFPEGIDIYFEHVGGKMLD----AVLLNMRLHGRIAACG  266 (356)
Q Consensus       226 ~~~~~~~~~~~~d~vid~~g~~~~~----~~~~~l~~~G~~v~~g  266 (356)
                           +.....+|++|+|+......    .-...+.++..++.+-
T Consensus        74 -----~~~~~~~dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~v  113 (170)
T d1nyta1          74 -----ELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMF  113 (170)
T ss_dssp             -----GGTTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESC
T ss_pred             -----cccccccceeecccccCcccCCCCCcHHHhccCcEEEEee
Confidence                 11112689999998643211    1123455555555553

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.19  E-value=0.00021  Score=59.12  Aligned_cols=105  Identities=9%  Similarity=0.025  Sum_probs=67.8

Q ss_pred             chHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC---CEE
Q 018404          140 PGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF---DDA  216 (356)
Q Consensus       140 ~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~v  216 (356)
                      +...|. ++ +...+++|++||-.|  +|.|..++.+++. +.+|++++.+++..          +.+++.+..   -.+
T Consensus        56 p~~~a~-ml-~~L~l~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~----------~~A~~~~~~~~nv~~  120 (224)
T d1vbfa_          56 LNLGIF-ML-DELDLHKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMY----------NYASKLLSYYNNIKL  120 (224)
T ss_dssp             HHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHH----------HHHHHHHTTCSSEEE
T ss_pred             hhhHHH-HH-HHhhhcccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHH----------HHHHHHHhccccccc
Confidence            334443 44 557899999999999  4567788777775 67999999887776          555422221   122


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      +.. +   ......+  .+.||.|+-+.+. ......++.|++||++|..
T Consensus       121 ~~~-d---~~~g~~~--~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         121 ILG-D---GTLGYEE--EKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             EES-C---GGGCCGG--GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccC-c---hhhcchh--hhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence            221 1   1111111  1369999876665 4456778999999999874

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.12  E-value=0.00079  Score=52.88  Aligned_cols=71  Identities=20%  Similarity=0.154  Sum_probs=54.0

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ...+.++.+|+|+| +||.+.+++.-++..|+ +++++.|+.++.          +.+.+.++... ++...        
T Consensus        11 ~~~~~~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka----------~~L~~~~~~~~-~~~~~--------   70 (167)
T d1npya1          11 KYHLNKNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTG----------QYLAALYGYAY-INSLE--------   70 (167)
T ss_dssp             HTTCCTTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHH----------HHHHHHHTCEE-ESCCT--------
T ss_pred             HcCCCCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHH----------HHHHHhhhhhh-hhccc--------
Confidence            35566788999999 89999999999999998 799999999887          66664666533 22111        


Q ss_pred             HHhCCCCccEEEeCCC
Q 018404          230 KRCFPEGIDIYFEHVG  245 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g  245 (356)
                          ...+|++++|+.
T Consensus        71 ----~~~~DliINaTp   82 (167)
T d1npya1          71 ----NQQADILVNVTS   82 (167)
T ss_dssp             ----TCCCSEEEECSS
T ss_pred             ----ccchhhheeccc
Confidence                125899999876

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.0006  Score=57.17  Aligned_cols=39  Identities=13%  Similarity=0.019  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      +|+++||+||++|+|.+.++-+...|++|+.++++++++
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~   42 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG   42 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence            689999999999999999999999999999999998887

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.08  E-value=0.0016  Score=55.74  Aligned_cols=100  Identities=11%  Similarity=0.023  Sum_probs=68.5

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcc
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEEN  223 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~  223 (356)
                      .+.+..++++|++||=+|  .|.|..++.+|+..|++|++++.|+++.          +.+++   +.|...-++.... 
T Consensus        53 ~~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~----------~~a~~~~~~~g~~~~v~~~~~-  119 (285)
T d1kpga_          53 LALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQA----------NHVQQLVANSENLRSKRVLLA-  119 (285)
T ss_dssp             HHHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHH----------HHHHHHHHTCCCCSCEEEEES-
T ss_pred             HHHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHH----------HHHHHHHHhhhhhhhhHHHHh-
Confidence            344567899999999998  5778899999999999999999999887          44432   3444211111111 


Q ss_pred             cHHHHHHHhCCCCccEEEe-----CCCc----hHHHHHHHhhccCCeEEE
Q 018404          224 DLDAALKRCFPEGIDIYFE-----HVGG----KMLDAVLLNMRLHGRIAA  264 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~  264 (356)
                      ++    ++. ++.+|.|+.     .+|.    ..++.+.+.|+|+|+++.
T Consensus       120 d~----~~~-~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l  164 (285)
T d1kpga_         120 GW----EQF-DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL  164 (285)
T ss_dssp             CG----GGC-CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred             hh----hcc-cccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEE
Confidence            21    111 246887754     3432    256889999999999885

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00034  Score=56.90  Aligned_cols=97  Identities=16%  Similarity=0.138  Sum_probs=63.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      .++|+|+||+|.+|..++..+...|.+|++++|+.+++          .... ..++. ++..+-. +. +.+.+... +
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~----------~~~~-~~~~~-~~~gD~~-d~-~~l~~al~-~   67 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL----------PSEG-PRPAH-VVVGDVL-QA-ADVDKTVA-G   67 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS----------CSSS-CCCSE-EEESCTT-SH-HHHHHHHT-T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhc----------cccc-ccccc-ccccccc-ch-hhHHHHhc-C
Confidence            46899999999999999998888899999999998876          3332 33343 3322221 22 22333222 5


Q ss_pred             ccEEEeCCCch-----------HHHHHHHhhccCC--eEEEEccc
Q 018404          237 IDIYFEHVGGK-----------MLDAVLLNMRLHG--RIAACGMI  268 (356)
Q Consensus       237 ~d~vid~~g~~-----------~~~~~~~~l~~~G--~~v~~g~~  268 (356)
                      +|+||.++|..           .....++.++..|  +++.++..
T Consensus        68 ~d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~  112 (205)
T d1hdoa_          68 QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (205)
T ss_dssp             CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeee
Confidence            89999999852           1234455555543  78877653

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.93  E-value=0.0011  Score=56.26  Aligned_cols=84  Identities=10%  Similarity=0.101  Sum_probs=53.6

Q ss_pred             CCCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE--EecCCcccHHH---
Q 018404          155 KKGEYIYVSAASG--AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA--FNYKEENDLDA---  227 (356)
Q Consensus       155 ~~g~~VlI~ga~g--~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~---  227 (356)
                      -+|+++||+||+|  |+|.+.++.+...|++|+.+.++++..      +.. +.+.++.+...+  .|..++++..+   
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~------~~~-~~l~~~~~~~~~~~~d~~~~~~~~~~~~   75 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE------KRV-RPIAQELNSPYVYELDVSKEEHFKSLYN   75 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTH------HHH-HHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHH-HHHHhhCCceeEeeecccchhhHHHHHH
Confidence            3589999999876  899999999999999999999885432      111 333313333222  23333222222   


Q ss_pred             HHHHhCCCCccEEEeCCCc
Q 018404          228 ALKRCFPEGIDIYFEHVGG  246 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~  246 (356)
                      .+.+.. +.+|+++.+.|.
T Consensus        76 ~~~~~~-g~id~lV~nag~   93 (274)
T d2pd4a1          76 SVKKDL-GSLDFIVHSVAF   93 (274)
T ss_dssp             HHHHHT-SCEEEEEECCCC
T ss_pred             HHHHHc-CCCCeEEeeccc
Confidence            333332 479999998883

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.92  E-value=0.0011  Score=56.57  Aligned_cols=104  Identities=14%  Similarity=0.163  Sum_probs=67.2

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHH
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLD  226 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~  226 (356)
                      .+....++++|++||=+| + |.|..+..+++..|++|++++.++++.      +.+.+.++ +.|....+..... ++ 
T Consensus        43 ~~~~~l~l~~g~~VLDiG-C-G~G~~a~~~a~~~g~~v~gi~ls~~q~------~~a~~~~~-~~~l~~~~~~~~~-d~-  111 (280)
T d2fk8a1          43 LNLDKLDLKPGMTLLDIG-C-GWGTTMRRAVERFDVNVIGLTLSKNQH------ARCEQVLA-SIDTNRSRQVLLQ-GW-  111 (280)
T ss_dssp             HHHTTSCCCTTCEEEEES-C-TTSHHHHHHHHHHCCEEEEEESCHHHH------HHHHHHHH-TSCCSSCEEEEES-CG-
T ss_pred             HHHHHcCCCCCCEEEEec-C-CchHHHHHHHHhCceeEEEecchHHHH------HHHHHHHH-hhccccchhhhhh-hh-
Confidence            344557899999999999 3 445567788999999999999999887      22223333 4454221111111 11 


Q ss_pred             HHHHHhCCCCccEEEe-----CCCc----hHHHHHHHhhccCCeEEEE
Q 018404          227 AALKRCFPEGIDIYFE-----HVGG----KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~  265 (356)
                         ++ ..+.+|.|+.     .++.    ..++.+.+.|+|+|+++.-
T Consensus       112 ---~~-~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         112 ---ED-FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             ---GG-CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             ---hh-hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence               11 1346888853     4443    2578889999999999853

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00021  Score=59.23  Aligned_cols=99  Identities=16%  Similarity=0.161  Sum_probs=64.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCC-----CEE-EecCCccc
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-----DDA-FNYKEEND  224 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~v-v~~~~~~~  224 (356)
                      .+++|++||-.|  .|.|..++.+|+..|  .+|++++.+++-.      +.+.+.++ +.+.     ..+ +-..+   
T Consensus        73 ~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~------~~a~~~l~-~~~~~~~~~~~~~~~~gD---  140 (224)
T d1i1na_          73 QLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELV------DDSVNNVR-KDDPTLLSSGRVQLVVGD---  140 (224)
T ss_dssp             TSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHH------HHHHHHHH-HHCTHHHHTSSEEEEESC---
T ss_pred             ccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHH------HHHHHhcc-ccCcccccccceEEEEee---
Confidence            789999999998  567888899999876  4999999887765      12222333 3232     111 11111   


Q ss_pred             HHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          225 LDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      ......+  .+.||.|+.+.+- ......++.|+|||++|..
T Consensus       141 ~~~~~~~--~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         141 GRMGYAE--EAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             GGGCCGG--GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cccccch--hhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            0000000  1279999987766 4557889999999999874

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.83  E-value=0.0012  Score=55.12  Aligned_cols=109  Identities=15%  Similarity=0.131  Sum_probs=70.5

Q ss_pred             HHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCccc
Q 018404          145 WAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEND  224 (356)
Q Consensus       145 ~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  224 (356)
                      +..|....++.+|++||=+|  .|.|..+..+++..|++|++++.+++..      +.+.+.++ +.|....++.... +
T Consensus        22 ~~~l~~~~~l~pg~~VLDiG--CG~G~~~~~la~~~~~~v~GvD~s~~~~------~~ar~~~~-~~gl~~~v~~~~~-d   91 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLG--SGSGEMLCTWARDHGITGTGIDMSSLFT------AQAKRRAE-ELGVSERVHFIHN-D   91 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEET--CTTCHHHHHHHHHTCCEEEEEESCHHHH------HHHHHHHH-HTTCTTTEEEEES-C
T ss_pred             HHHHHHHcCCCCCCEEEEEc--CCCCHHHHHHHHhcCCEEEEEecccchh------hHHHHHHH-Hhhccccchhhhh-H
Confidence            44566778999999999888  4456677888988899999999998876      11222333 4565321111111 2


Q ss_pred             HHHHHHHhCCCCccEEEeCCC-----c--hHHHHHHHhhccCCeEEEEc
Q 018404          225 LDAALKRCFPEGIDIYFEHVG-----G--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +.+ +  ...+.+|+|+-.-.     .  ..+..+.+.|+|+|+++...
T Consensus        92 ~~~-~--~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          92 AAG-Y--VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CTT-C--CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             Hhh-c--cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            111 1  12237999875322     2  47788999999999988643

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.80  E-value=0.004  Score=52.27  Aligned_cols=81  Identities=15%  Similarity=0.103  Sum_probs=51.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec---C-Cc--ccHH----HH
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY---K-EE--NDLD----AA  228 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~---~-~~--~~~~----~~  228 (356)
                      +.||+||++|+|.+.++.+...|++|+.+.++.++.     .+++.+++....+.......   . +.  .+..    +.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA-----AQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   77 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-----HHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH-----HHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHH
Confidence            579999999999999999999999999999886653     12233444423333332211   1 11  0111    22


Q ss_pred             HHHhCCCCccEEEeCCC
Q 018404          229 LKRCFPEGIDIYFEHVG  245 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g  245 (356)
                      +.+.. |++|+++++.|
T Consensus        78 ~~~~~-g~iDilvnnAG   93 (266)
T d1mxha_          78 SFRAF-GRCDVLVNNAS   93 (266)
T ss_dssp             HHHHH-SCCCEEEECCC
T ss_pred             HHHHh-CCCCEEEECCc
Confidence            22222 47999999998

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.79  E-value=0.003  Score=52.91  Aligned_cols=84  Identities=14%  Similarity=0.200  Sum_probs=53.3

Q ss_pred             CCCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEec--CCcccHHHHHH
Q 018404          155 KKGEYIYVSAASG--AVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNY--KEENDLDAALK  230 (356)
Q Consensus       155 ~~g~~VlI~ga~g--~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~--~~~~~~~~~~~  230 (356)
                      -+|+++||+||+|  |+|.+.+..+...|++|+.+.++++..      +++.+... ..+....+..  .+..+......
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   75 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK------GRVEEFAA-QLGSDIVLQCDVAEDASIDTMFA   75 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTH------HHHHHHHH-HTTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHH------HHHHHHHh-hcCCcceeecccchHHHHHHHHH
Confidence            4689999999998  789999999999999999999886543      22223333 4444333222  22212222333


Q ss_pred             HhCC--CCccEEEeCCC
Q 018404          231 RCFP--EGIDIYFEHVG  245 (356)
Q Consensus       231 ~~~~--~~~d~vid~~g  245 (356)
                      +...  +..|+++++.+
T Consensus        76 ~~~~~~~~~d~~v~~a~   92 (258)
T d1qsga_          76 ELGKVWPKFDGFVHSIG   92 (258)
T ss_dssp             HHHTTCSSEEEEEECCC
T ss_pred             HhhhcccccceEEEeec
Confidence            3222  37899998866

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.78  E-value=0.0073  Score=50.49  Aligned_cols=97  Identities=18%  Similarity=0.149  Sum_probs=63.3

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHh
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~  232 (356)
                      .++|++||=.| +| .|..++.++ .+|++|++++.++...      +.+.+.++ ..|.. .++..    +..+.+   
T Consensus       118 ~~~g~~VLDiG-cG-sG~l~i~aa-~~g~~V~gvDis~~av------~~A~~na~-~n~~~~~~~~~----d~~~~~---  180 (254)
T d2nxca1         118 LRPGDKVLDLG-TG-SGVLAIAAE-KLGGKALGVDIDPMVL------PQAEANAK-RNGVRPRFLEG----SLEAAL---  180 (254)
T ss_dssp             CCTTCEEEEET-CT-TSHHHHHHH-HTTCEEEEEESCGGGH------HHHHHHHH-HTTCCCEEEES----CHHHHG---
T ss_pred             cCccCEEEEcc-cc-hhHHHHHHH-hcCCEEEEEECChHHH------HHHHHHHH-HcCCceeEEec----cccccc---
Confidence            68999999998 44 366776655 4689999999998877      22222333 34553 23321    332222   


Q ss_pred             CCCCccEEEeCCCch----HHHHHHHhhccCCeEEEEcc
Q 018404          233 FPEGIDIYFEHVGGK----MLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       233 ~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ..+.+|+|+...-..    .+..+.+.|+|+|+++..|.
T Consensus       181 ~~~~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         181 PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccchhhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            124799999765543    44677889999999998765

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.72  E-value=0.011  Score=46.74  Aligned_cols=110  Identities=12%  Similarity=0.082  Sum_probs=64.8

Q ss_pred             HHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHH---hhcCC-CEEEecC
Q 018404          146 AGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLK---NKFGF-DDAFNYK  220 (356)
Q Consensus       146 ~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~---~~~g~-~~vv~~~  220 (356)
                      ++|.....--++.+|+|+| +||.+.+++..+..+|+ +++.+.|+.++.      +++...++   ..+.. ..+.+..
T Consensus         7 ~~l~~~~~~l~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~   79 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFF------DKALAFAQRVNENTDCVVTVTDLA   79 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTH------HHHHHHHHHHHHHSSCEEEEEETT
T ss_pred             HHHHHcCCCcCCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHH------HHHHHHHHHHHhhcCcceEeeecc
Confidence            3454433223578999999 79999999999998998 788888887765      11112222   12222 2234444


Q ss_pred             CcccHHHHHHHhCCCCccEEEeCCCchHH-------HHHHHhhccCCeEEEEcc
Q 018404          221 EENDLDAALKRCFPEGIDIYFEHVGGKML-------DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       221 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~-------~~~~~~l~~~G~~v~~g~  267 (356)
                      +...+.+.+.     .+|++|+|+.-...       ..-+..++++..++.+-.
T Consensus        80 ~~~~~~~~~~-----~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y  128 (182)
T d1vi2a1          80 DQQAFAEALA-----SADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY  128 (182)
T ss_dssp             CHHHHHHHHH-----TCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCC
T ss_pred             cccchhhhhc-----ccceeccccCCccccccchhhhhHHHhhhcchhhHHhhc
Confidence            3212333332     48999999863211       111345677777777754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.0057  Score=47.16  Aligned_cols=102  Identities=17%  Similarity=0.167  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecC
Q 018404          142 MTAWAGFYEICA-PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYK  220 (356)
Q Consensus       142 ~tA~~~l~~~~~-~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~  220 (356)
                      .+.+.++.+..+ +-.|++|+|.| .|-+|...++.++.+|++|++++..+-+.          -++. .-|.. +.   
T Consensus         8 ~S~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~a----------l~A~-~dG~~-v~---   71 (163)
T d1li4a1           8 ESLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINA----------LQAA-MEGYE-VT---   71 (163)
T ss_dssp             HHHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTCE-EC---
T ss_pred             hhHHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchh----------HHhh-cCceE-ee---
Confidence            445555555444 45899999999 99999999999999999999999887664          2222 22432 21   


Q ss_pred             CcccHHHHHHHhCCCCccEEEeCCCch--HHHHHHHhhccCCeEEEEcc
Q 018404          221 EENDLDAALKRCFPEGIDIYFEHVGGK--MLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       221 ~~~~~~~~~~~~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~  267 (356)
                         .+.+.+.     ..|+++-|+|..  .-.+.++.|+++..+..+|.
T Consensus        72 ---~~~~a~~-----~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Gh  112 (163)
T d1li4a1          72 ---TMDEACQ-----EGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGH  112 (163)
T ss_dssp             ---CHHHHTT-----TCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSS
T ss_pred             ---ehhhhhh-----hccEEEecCCCccchhHHHHHhccCCeEEEEecc
Confidence               3333333     379999999983  33678888998888888875

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=96.71  E-value=0.0053  Score=50.46  Aligned_cols=110  Identities=12%  Similarity=0.076  Sum_probs=74.0

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL  225 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  225 (356)
                      |..+.+..+..+||-+|  +++|..++.+|+.+  +.+|+.+..+++..      +.+.+.++ +.|....+..... +.
T Consensus        51 L~~L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~------~~A~~~~~-~~g~~~~i~~~~g-~a  120 (227)
T d1susa1          51 LSMLLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENY------ELGLPVIK-KAGVDHKIDFREG-PA  120 (227)
T ss_dssp             HHHHHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHH------HHHHHHHH-HTTCGGGEEEEES-CH
T ss_pred             HHHHHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhH------HHHHHHHH-Hhccccceeeeeh-HH
Confidence            33344556678999998  78899999999987  56999999998775      22333444 5676433333332 44


Q ss_pred             HHHHHHh-----CCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          226 DAALKRC-----FPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       226 ~~~~~~~-----~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+.+.++     ..+.||.||--...    ..+..+++.|+++|.++.=..
T Consensus       121 ~~~L~~l~~~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DNv  171 (227)
T d1susa1         121 LPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNT  171 (227)
T ss_dssp             HHHHHHHHHCGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEETT
T ss_pred             HHHHHHHHhccccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEccC
Confidence            4455544     23479999754332    367899999999999886543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.68  E-value=0.009  Score=46.52  Aligned_cols=97  Identities=14%  Similarity=0.094  Sum_probs=64.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      +++|+|.| +|.+|..+++.+...|.+|+++.++.++.          +.+.++++...+...... . ........ ..
T Consensus         2 ~K~IliiG-aG~~G~~~a~~L~~~g~~V~v~dr~~~~a----------~~l~~~~~~~~~~~~~~~-~-~~~~~~~i-~~   67 (182)
T d1e5qa1           2 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESA----------KKLSAGVQHSTPISLDVN-D-DAALDAEV-AK   67 (182)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESCHHHH----------HHHHTTCTTEEEEECCTT-C-HHHHHHHH-TT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECChHHH----------HHHHhccccccccccccc-c-hhhhHhhh-hc
Confidence            57899999 69999999999999999999999999998          777745554322222111 1 11111111 13


Q ss_pred             ccEEEeCCCc-hHHHHHHHhhccCCeEEEEcc
Q 018404          237 IDIYFEHVGG-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       237 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .|.++.+... .....+..++..+.+++....
T Consensus        68 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (182)
T d1e5qa1          68 HDLVISLIPYTFHATVIKSAIRQKKHVVTTSY   99 (182)
T ss_dssp             SSEEEECSCGGGHHHHHHHHHHHTCEEECSSC
T ss_pred             cceeEeeccchhhhHHHHHHHhhccceeeccc
Confidence            6788887776 455555566666667665543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.67  E-value=0.0043  Score=52.06  Aligned_cols=84  Identities=19%  Similarity=0.131  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCchHHHHHHH-HHHH--cCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE----EecCCccc---H
Q 018404          156 KGEYIYVSAASGAVGQLVGQ-FAKL--MGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA----FNYKEEND---L  225 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~-la~~--~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v----v~~~~~~~---~  225 (356)
                      .|+.++|+||++|+|.++++ ||+.  .|++|+.++++++++      +++.++++.+.+-..+    .|-.+.++   +
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l------~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l   78 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESML------RQLKEELGAQQPDLKVVLAAADLGTEAGVQRL   78 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHH------HHHHHHHHHHCTTSEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHH------HHHHHHHHhhcCCceEEEEEccCCCHHHHHHH
Confidence            47889999999999998775 5553  599999999998887      3333444412222222    24444312   2


Q ss_pred             HHHHHHhC--CC-CccEEEeCCC
Q 018404          226 DAALKRCF--PE-GIDIYFEHVG  245 (356)
Q Consensus       226 ~~~~~~~~--~~-~~d~vid~~g  245 (356)
                      .+.+.+..  .+ ..|+++++.|
T Consensus        79 ~~~~~~~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          79 LSAVRELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HHHHHHSCCCTTCCEEEEEECCC
T ss_pred             HHHHHHhhhhccCceEEEEeccc
Confidence            23333432  22 6788888765

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.63  E-value=0.0039  Score=49.52  Aligned_cols=104  Identities=21%  Similarity=0.210  Sum_probs=66.6

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ...++++|++||=.|  .|.|..++.+|+. +.+|++++.+++.+      +.+.+.++ ++|...-+..... +..+.+
T Consensus        27 ~~l~~~~g~~VLDiG--cGsG~~s~~lA~~-~~~V~avD~~~~~l------~~a~~n~~-~~gl~~~v~~~~g-da~~~~   95 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVG--CGTGGVTLELAGR-VRRVYAIDRNPEAI------STTEMNLQ-RHGLGDNVTLMEG-DAPEAL   95 (186)
T ss_dssp             HHHCCCTTCEEEEES--CTTSHHHHHHHTT-SSEEEEEESCHHHH------HHHHHHHH-HTTCCTTEEEEES-CHHHHH
T ss_pred             HhcCCCCCCEEEEEE--CCeEccccccccc-ceEEEEecCCHHHH------HHHHHHHH-HcCCCcceEEEEC-chhhcc
Confidence            346889999999887  3455666777765 67999999998876      23334444 5665311111111 333333


Q ss_pred             HHhCCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEc
Q 018404          230 KRCFPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ..  .+.+|.||...+.    +.++.+.+.|+|+|+++...
T Consensus        96 ~~--~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_          96 CK--IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             TT--SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cc--cCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            22  1379988865432    36778889999999988653

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.63  E-value=0.0026  Score=52.56  Aligned_cols=105  Identities=13%  Similarity=0.131  Sum_probs=68.3

Q ss_pred             HHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcc
Q 018404          146 AGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEEN  223 (356)
Q Consensus       146 ~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~  223 (356)
                      ..+...+.+++|++||=+|  .|.|..+..+++ .+.+|++++.|++.+      +.+.+.++ +.+...  .+..+.. 
T Consensus         6 ~~l~~~~~~~~~~rILDiG--cGtG~~~~~la~-~~~~v~gvD~S~~~l------~~A~~~~~-~~~~~~~~~~~~d~~-   74 (234)
T d1xxla_           6 GLMIKTAECRAEHRVLDIG--AGAGHTALAFSP-YVQECIGVDATKEMV------EVASSFAQ-EKGVENVRFQQGTAE-   74 (234)
T ss_dssp             HHHHHHHTCCTTCEEEEES--CTTSHHHHHHGG-GSSEEEEEESCHHHH------HHHHHHHH-HHTCCSEEEEECBTT-
T ss_pred             HHHHHHhCCCCCCEEEEeC--CcCcHHHHHHHH-hCCeEEEEeCChhhh------hhhhhhhc-ccccccccccccccc-
Confidence            3455678999999999998  456777788877 478999999998876      22223333 344431  1211111 


Q ss_pred             cHHHHHHHhCCCCccEEEeCCCc-------hHHHHHHHhhccCCeEEEEc
Q 018404          224 DLDAALKRCFPEGIDIYFEHVGG-------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +    + .+..+.+|+|+.+..-       ..++.+.+.|+|+|+++...
T Consensus        75 ~----~-~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          75 S----L-PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             B----C-CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             c----c-cccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            1    0 1123479999864332       36789999999999988753

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.57  E-value=0.004  Score=52.40  Aligned_cols=83  Identities=14%  Similarity=0.231  Sum_probs=55.6

Q ss_pred             CCCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCc---ccH
Q 018404          154 PKKGEYIYVSAAS--GAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEE---NDL  225 (356)
Q Consensus       154 ~~~g~~VlI~ga~--g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~---~~~  225 (356)
                      +-+|+++||+||+  .|+|.+.++-+...|++|+.+.++.++.         .+.+.++++..   ...|..++   +++
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~---------~~~~~~~~~~~~~~~~~dv~~~~~~~~~   73 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---------IQRITDRLPAKAPLLELDVQNEEHLASL   73 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHH---------HHHHHTTSSSCCCEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHH---------HHHHHHHcCCceeeEeeecccccccccc
Confidence            4568999999954  5799999999999999999999887664         13344355542   22333332   133


Q ss_pred             HHHHHHhCC--CCccEEEeCCC
Q 018404          226 DAALKRCFP--EGIDIYFEHVG  245 (356)
Q Consensus       226 ~~~~~~~~~--~~~d~vid~~g  245 (356)
                      .+.+.+...  +.+|+++.+.|
T Consensus        74 ~~~v~~~~~~~~~ld~~i~~ag   95 (268)
T d2h7ma1          74 AGRVTEAIGAGNKLDGVVHSIG   95 (268)
T ss_dssp             HHHHHHHHCTTCCEEEEEECCC
T ss_pred             cchhhhccccCCCcceeeeccc
Confidence            344444333  27899999888

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.57  E-value=0.00086  Score=55.30  Aligned_cols=109  Identities=17%  Similarity=0.154  Sum_probs=64.4

Q ss_pred             chHHHHHHHHHH-cCCCCCCEEEEecCCchHHHHHHHHHHHc---C----CEEEEEeCCcchhccccchhHHHHHHHh--
Q 018404          140 PGMTAWAGFYEI-CAPKKGEYIYVSAASGAVGQLVGQFAKLM---G----CYVVGSAGSREKVWLIPMQSQLVELLKN--  209 (356)
Q Consensus       140 ~~~tA~~~l~~~-~~~~~g~~VlI~ga~g~vG~~ai~la~~~---g----~~Vi~~~~~~~~~~~~~~~~~~~~~~~~--  209 (356)
                      +...| .++..+ ..+++|++||..|  +|.|+.++.+++..   |    .+|+.+...++-.          +.+++  
T Consensus        64 P~~~a-~~l~~L~~~l~~g~~VLeIG--tGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~----------~~a~~~l  130 (223)
T d1r18a_          64 PHMHA-FALEYLRDHLKPGARILDVG--SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELV----------RRSKANL  130 (223)
T ss_dssp             HHHHH-HHHHHTTTTCCTTCEEEEES--CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHH----------HHHHHHH
T ss_pred             hhhHH-HHHHHHhhccCCCCeEEEec--CCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHH----------HHHHHhh
Confidence            33444 344332 3789999999999  45566666666654   3    3899999887654          33321  


Q ss_pred             ------hcCCCEE-EecCCcccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEE-Ec
Q 018404          210 ------KFGFDDA-FNYKEENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAA-CG  266 (356)
Q Consensus       210 ------~~g~~~v-v~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~-~g  266 (356)
                            ..+...+ +...+   ..+...+  .+.||.|+-+.+- ..-...++.|+++|++|. +|
T Consensus       131 ~~~~~~~~~~~nv~~~~~d---~~~~~~~--~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pvg  191 (223)
T d1r18a_         131 NTDDRSMLDSGQLLIVEGD---GRKGYPP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG  191 (223)
T ss_dssp             HHHHHHHHHHTSEEEEESC---GGGCCGG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             hhcchhhcCccEEEEEecc---ccccccc--ccceeeEEEEeechhchHHHHHhcCCCcEEEEEEe
Confidence                  1122212 11111   1111111  1379999877766 444677899999999986 44

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.48  E-value=0.0067  Score=48.01  Aligned_cols=98  Identities=14%  Similarity=0.010  Sum_probs=64.1

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE---------------
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD---------------  215 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---------------  215 (356)
                      ...+.+|.+||..|  -|.|..+..||+ .|++|++++.|++.+          +.+++..+...               
T Consensus        15 ~l~~~~~~rvLd~G--CG~G~~a~~la~-~G~~V~gvD~S~~~i----------~~a~~~~~~~~~~~~~~~~~~~~~~~   81 (201)
T d1pjza_          15 SLNVVPGARVLVPL--CGKSQDMSWLSG-QGYHVVGAELSEAAV----------ERYFTERGEQPHITSQGDFKVYAAPG   81 (201)
T ss_dssp             HHCCCTTCEEEETT--TCCSHHHHHHHH-HCCEEEEEEECHHHH----------HHHHHHHCSCSEEEEETTEEEEECSS
T ss_pred             HcCCCCCCEEEEec--CcCCHHHHHHHH-cCCceEeecccHHHH----------HHHHHHhccccchhhhhhhhhccccc
Confidence            34689999999999  356788888887 499999999999988          66764332211               


Q ss_pred             --EEecCCcccHHHHHHHhCCCCccEEEeCCCc---------hHHHHHHHhhccCCeEEEEc
Q 018404          216 --AFNYKEENDLDAALKRCFPEGIDIYFEHVGG---------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       216 --vv~~~~~~~~~~~~~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  266 (356)
                        .+..+-. ++.....    ..+|+|++....         ..+..+.+.|+|+|+++...
T Consensus        82 ~~~~~~d~~-~l~~~~~----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          82 IEIWCGDFF-ALTARDI----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SEEEEECCS-SSTHHHH----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cceeccccc-ccccccc----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence              0100000 1111111    158998874441         35678889999999976543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.48  E-value=0.011  Score=46.40  Aligned_cols=84  Identities=17%  Similarity=0.146  Sum_probs=59.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-------EecCC--cccHHHH
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-------FNYKE--ENDLDAA  228 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-------v~~~~--~~~~~~~  228 (356)
                      .+|.|.| +|.+|.+.+..+...|.+|++.++++++.          +.++ +.+....       .....  ..+..+.
T Consensus         2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~   69 (184)
T d1bg6a2           2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRI----------KEIQ-DRGAIIAEGPGLAGTAHPDLLTSDIGLA   69 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HHTSEEEESSSCCEEECCSEEESCHHHH
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHH-HcCCCchhhhhhhhhhhhhhhhhhhHhH
Confidence            5899999 79999999999999999999999998887          7777 5443111       00000  0133344


Q ss_pred             HHHhCCCCccEEEeCCCchHHHHHHHhhcc
Q 018404          229 LKRCFPEGIDIYFEHVGGKMLDAVLLNMRL  258 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g~~~~~~~~~~l~~  258 (356)
                      +.     .+|++|-|+........++.+++
T Consensus        70 ~~-----~aD~iii~v~~~~~~~~~~~i~~   94 (184)
T d1bg6a2          70 VK-----DADVILIVVPAIHHASIAANIAS   94 (184)
T ss_dssp             HT-----TCSEEEECSCGGGHHHHHHHHGG
T ss_pred             hc-----CCCEEEEEEchhHHHHHHHHhhh
Confidence            43     48999999998766666655554

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.46  E-value=0.0024  Score=54.43  Aligned_cols=105  Identities=9%  Similarity=0.021  Sum_probs=68.8

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCccc
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEEND  224 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~  224 (356)
                      |.....+.+|.+||=+|  .|.|..+..+++..|++|++++.++...      +.+.+... ..|..   .++..+-. +
T Consensus        59 l~~~~~l~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~i------~~a~~~~~-~~gl~~~v~~~~~d~~-~  128 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLG--AGYGGAARFLVRKFGVSIDCLNIAPVQN------KRNEEYNN-QAGLADNITVKYGSFL-E  128 (282)
T ss_dssp             HHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHH------HHHHHHHH-HHTCTTTEEEEECCTT-S
T ss_pred             HHHhcCCCCCCEEEEeC--CCCcHHHhhhhccCCcEEEEEeccchhh------hhhhcccc-cccccccccccccccc-c
Confidence            44456789999999998  3467788889998899999999998876      12222333 44543   12221111 1


Q ss_pred             HHHHHHHhCCCCccEEEeCCC-----c--hHHHHHHHhhccCCeEEEEcc
Q 018404          225 LDAALKRCFPEGIDIYFEHVG-----G--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                          + .+..+.+|+|+-.-.     .  ..+..+.+.|+|+|+++....
T Consensus       129 ----l-~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         129 ----I-PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             ----C-SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ----c-cccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence                1 111237999975322     2  367899999999999987654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.45  E-value=0.0078  Score=47.07  Aligned_cols=100  Identities=9%  Similarity=-0.003  Sum_probs=62.7

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC---CEEEecCCcc
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF---DDAFNYKEEN  223 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~vv~~~~~~  223 (356)
                      +|....-..++.+|+|.| +||.+.+++..+...+.+|+++.|+.++.          +.+.+.++.   ...+....  
T Consensus         8 ~l~~~~~~~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a----------~~l~~~~~~~~~~~~~~~~~--   74 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKT----------KELAERFQPYGNIQAVSMDS--   74 (171)
T ss_dssp             HHHHTTCCCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHH----------HHHHHHHGGGSCEEEEEGGG--
T ss_pred             HHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHH----------HHHHHHHhhccccchhhhcc--
Confidence            344433345788999999 89999999988887778999999999887          555434432   12222211  


Q ss_pred             cHHHHHHHhCCCCccEEEeCCCchHHHH----HHHhhccCCeEEEEcc
Q 018404          224 DLDAALKRCFPEGIDIYFEHVGGKMLDA----VLLNMRLHGRIAACGM  267 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid~~g~~~~~~----~~~~l~~~G~~v~~g~  267 (356)
                              .....+|++|+|+.......    ....++++..++.+-.
T Consensus        75 --------~~~~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          75 --------IPLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             --------CCCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCC
T ss_pred             --------ccccccceeeecccccccccccchhhhhhcccceeeeeec
Confidence                    11136899999988532211    2334566676666543

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.43  E-value=0.018  Score=42.64  Aligned_cols=91  Identities=15%  Similarity=0.144  Sum_probs=62.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      +|+|.| .|.+|...++.+...|..|++++.++++.          +.+.++++.. ++..+.  .-.+.+++..-..+|
T Consensus         2 ~IvI~G-~G~~G~~la~~L~~~g~~v~vid~d~~~~----------~~~~~~~~~~-vi~Gd~--~~~~~l~~~~i~~a~   67 (132)
T d1lssa_           2 YIIIAG-IGRVGYTLAKSLSEKGHDIVLIDIDKDIC----------KKASAEIDAL-VINGDC--TKIKTLEDAGIEDAD   67 (132)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHHHCSSE-EEESCT--TSHHHHHHTTTTTCS
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCcceecCChhhh----------hhhhhhhhhh-hccCcc--cchhhhhhcChhhhh
Confidence            589999 69999999999999999999999999988          7777466654 443322  223345554333789


Q ss_pred             EEEeCCCchHHH----HHHHhhccCCeEEE
Q 018404          239 IYFEHVGGKMLD----AVLLNMRLHGRIAA  264 (356)
Q Consensus       239 ~vid~~g~~~~~----~~~~~l~~~G~~v~  264 (356)
                      .++-++..+..+    ...+.+.+. +++.
T Consensus        68 ~vv~~t~~d~~N~~~~~~~k~~~~~-~iI~   96 (132)
T d1lssa_          68 MYIAVTGKEEVNLMSSLLAKSYGIN-KTIA   96 (132)
T ss_dssp             EEEECCSCHHHHHHHHHHHHHTTCC-CEEE
T ss_pred             hhcccCCcHHHHHHHHHHHHHcCCc-eEEE
Confidence            999988885332    233444544 4443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.43  E-value=0.0044  Score=52.58  Aligned_cols=35  Identities=14%  Similarity=0.076  Sum_probs=30.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .+||+||++|+|.+.++.+...|++|+.+.++.+.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   38 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA   38 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHH
Confidence            46899999999999999999999999988765443

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.37  E-value=0.039  Score=41.78  Aligned_cols=98  Identities=19%  Similarity=0.175  Sum_probs=66.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHH---------
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLD---------  226 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---------  226 (356)
                      .+|.|+|++|.+|..+.++.+..  ..+|++.+...+-       +.|.+.++ +|.+..++-.++. ...         
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~-------~~L~~q~~-ef~Pk~v~i~d~~-~~~~l~~~~~~~   73 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNV-------KDLADAAK-RTNAKRAVIADPS-LYNDLKEALAGS   73 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCH-------HHHHHHHH-HTTCSEEEESCGG-GHHHHHHHTTTC
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCH-------HHHHHHHH-hhccccceeccHH-HHHHHHHHhhhc
Confidence            68999999999999999999987  5688888765443       12336666 8888766544332 111         


Q ss_pred             --------HHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEE
Q 018404          227 --------AALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAA  264 (356)
Q Consensus       227 --------~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~  264 (356)
                              +.+.+.....+|+++.++.| ..+...+..++.+-++..
T Consensus        74 ~~~v~~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL  120 (150)
T d1r0ka2          74 SVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVAL  120 (150)
T ss_dssp             SSEEEESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred             ccccccCccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence                    11122212257898888666 788888888887766443

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0028  Score=52.25  Aligned_cols=98  Identities=7%  Similarity=-0.061  Sum_probs=65.0

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC--CEEEecCCcccHHHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF--DDAFNYKEENDLDAALKR  231 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~~~  231 (356)
                      ..+|.+||-+|  .|.|..+..+++..+.+|++++.+++.+          +.+++.+..  ..+.....  +.......
T Consensus        51 ~~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~----------~~a~~~~~~~~~~~~~~~~--~~~~~~~~  116 (229)
T d1zx0a1          51 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVF----------QRLRDWAPRQTHKVIPLKG--LWEDVAPT  116 (229)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHH----------HHHHHHGGGCSSEEEEEES--CHHHHGGG
T ss_pred             ccCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHH----------HHHHHHhhhcccccccccc--cccccccc
Confidence            36788999998  5667888889887777999999998887          766633221  11111111  33434444


Q ss_pred             hCCCCccEE-EeCCCc-----------hHHHHHHHhhccCCeEEEE
Q 018404          232 CFPEGIDIY-FEHVGG-----------KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       232 ~~~~~~d~v-id~~g~-----------~~~~~~~~~l~~~G~~v~~  265 (356)
                      ...+.+|.+ ||.+..           ..+..+.+.|+|||+++..
T Consensus       117 ~~~~~fD~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         117 LPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             SCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccccccceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            444578887 465432           1456788999999999764

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.33  E-value=0.023  Score=40.82  Aligned_cols=93  Identities=6%  Similarity=-0.081  Sum_probs=62.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|+|.| .|.+|..-++.+...|++|++++......        +...+. +-+. ..+...-    .+.  .+  .
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~--------~~~~~~-~~~i-~~~~~~~----~~~--dl--~   71 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQ--------FTVWAN-EGML-TLVEGPF----DET--LL--D   71 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHH--------HHHHHT-TTSC-EEEESSC----CGG--GG--T
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChH--------HHHHHh-cCCc-eeeccCC----CHH--Hh--C
Confidence            378999999 89999999999999999999988655432        112222 2222 2222111    100  01  2


Q ss_pred             CccEEEeCCCchHH-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGGKML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~  267 (356)
                      ++++|+-+.+...+ ....+..++.|.+|.+..
T Consensus        72 ~~~lv~~at~d~~~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          72 SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             CCcEEeecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence            58999999998655 467778888999998754

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.32  E-value=0.0074  Score=49.27  Aligned_cols=101  Identities=15%  Similarity=0.154  Sum_probs=65.9

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDA  227 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~  227 (356)
                      +.++++++++||=+| + |.|..+..+++ .|++|++++.+++..      +.+++.++ +.+...  ++..+.. +   
T Consensus         9 ~~~~l~~~~rVLDiG-c-G~G~~~~~l~~-~~~~v~gvD~s~~~i------~~A~~~~~-~~~~~~i~~~~~d~~-~---   74 (231)
T d1vl5a_           9 QIAALKGNEEVLDVA-T-GGGHVANAFAP-FVKKVVAFDLTEDIL------KVARAFIE-GNGHQQVEYVQGDAE-Q---   74 (231)
T ss_dssp             HHHTCCSCCEEEEET-C-TTCHHHHHHGG-GSSEEEEEESCHHHH------HHHHHHHH-HTTCCSEEEEECCC--C---
T ss_pred             HhcCCCCcCEEEEec-c-cCcHHHHHHHH-hCCEEEEEECCHHHH------hhhhhccc-ccccccccccccccc-c---
Confidence            568899999999999 3 36777777765 478999999998766      12222333 345432  2222111 1   


Q ss_pred             HHHHhCCCCccEEEeCCC-----c--hHHHHHHHhhccCCeEEEEc
Q 018404          228 ALKRCFPEGIDIYFEHVG-----G--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                       + .+..+.+|+|+..-.     .  ..+..+.+.|+|+|+++...
T Consensus        75 -l-~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          75 -M-PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             -C-CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -c-cccccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence             1 122347999986433     2  46789999999999998764

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.22  E-value=0.0059  Score=50.30  Aligned_cols=92  Identities=17%  Similarity=0.126  Sum_probs=65.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      +.++.+||=.| + |.|..+..+++ .|++|++++.+++.+          +.++ +.+....+..... ++     ...
T Consensus        40 ~~~~~~vLDiG-c-G~G~~~~~l~~-~~~~v~giD~s~~~l----------~~a~-~~~~~~~~~~~~~-~l-----~~~   99 (246)
T d2avna1          40 LKNPCRVLDLG-G-GTGKWSLFLQE-RGFEVVLVDPSKEML----------EVAR-EKGVKNVVEAKAE-DL-----PFP   99 (246)
T ss_dssp             CCSCCEEEEET-C-TTCHHHHHHHT-TTCEEEEEESCHHHH----------HHHH-HHTCSCEEECCTT-SC-----CSC
T ss_pred             cCCCCEEEEEC-C-CCchhcccccc-cceEEEEeecccccc----------cccc-ccccccccccccc-cc-----ccc
Confidence            55778998887 4 47888888876 599999999999888          8888 5565545544332 21     122


Q ss_pred             CCCccEEEeCCCc--------hHHHHHHHhhccCCeEEEE
Q 018404          234 PEGIDIYFEHVGG--------KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       234 ~~~~d~vid~~g~--------~~~~~~~~~l~~~G~~v~~  265 (356)
                      .+.+|+|+.....        ..++.+.+.|+|||.++..
T Consensus       100 ~~~fD~ii~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         100 SGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             TTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccccceeeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            2479999865432        3567888999999998754

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.011  Score=48.13  Aligned_cols=110  Identities=10%  Similarity=0.010  Sum_probs=73.1

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL  225 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  225 (356)
                      |..+.+....++||-+|  .+.|..++.+|+.+  +.+|+.++.+++..      ..+.+.++ +.|....+..... +.
T Consensus        51 L~~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~------~~A~~~~~-~ag~~~~i~~~~G-da  120 (219)
T d2avda1          51 LANLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPP------ELGRPLWR-QAEAEHKIDLRLK-PA  120 (219)
T ss_dssp             HHHHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHH------HHHHHHHH-HTTCTTTEEEEES-CH
T ss_pred             HHHHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHH------HHHHHHHH-hcCccceEEEEEe-eh
Confidence            33445566778999998  67899999999987  56999999888875      22234444 5576433333332 33


Q ss_pred             HHHHHHh----CCCCccEEEeCCCc----hHHHHHHHhhccCCeEEEEcc
Q 018404          226 DAALKRC----FPEGIDIYFEHVGG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       226 ~~~~~~~----~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+.+.+.    ..+.+|.||--...    ..+..+++.|++||.++.=..
T Consensus       121 ~e~l~~~~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn~  170 (219)
T d2avda1         121 LETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV  170 (219)
T ss_dssp             HHHHHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             hhcchhhhhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeCC
Confidence            4444332    23379998865443    357899999999999886543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.05  E-value=0.053  Score=41.06  Aligned_cols=97  Identities=16%  Similarity=0.123  Sum_probs=66.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH---HH------
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL---DA------  227 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~---~~------  227 (356)
                      +|.|+|++|.+|..+..+.+..  ..+|++.+-..+-       +.+.+.++ +|.+..++-.++. .+   ..      
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~-------~~L~~q~~-~f~pk~v~i~d~~-~~~~l~~~l~~~~   73 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNV-------TRMVEQCL-EFSPRYAVMDDEA-SAKLLKTMLQQQG   73 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCH-------HHHHHHHH-HHCCSEEEESSHH-HHHHHHHHHHHTT
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcH-------HHHHHHHH-HHhhcccccccHH-HHHHHHHHhhhhc
Confidence            7999999999999999999988  4688877755443       22446666 8888776644432 11   11      


Q ss_pred             ----------HHHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEE
Q 018404          228 ----------ALKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAA  264 (356)
Q Consensus       228 ----------~~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~  264 (356)
                                .+.+.... .+|+|+.++.| ..+...+..++.+-++.+
T Consensus        74 ~~~~~~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          74 SRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             CCCEEEESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             cccccccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence                      12222222 68999998877 788888888887766443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.01  E-value=0.084  Score=39.11  Aligned_cols=77  Identities=14%  Similarity=0.141  Sum_probs=48.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|.|.|++|-+|...++..... ++++.+.....+..          ..+. ..+++.++|....+...+.++.....+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~----------~~~~-~~~~DvvIDFS~p~~~~~~~~~~~~~~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPL----------SLLT-DGNTEVVIDFTHPDVVMGNLEFLIDNGI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCT----------HHHH-TTTCSEEEECCCTTTHHHHHHHHHHTTC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCch----------hhhc-cccCCEEEEcccHHHHHHHHHHHHhcCC
Confidence            6899999999999998887665 77887776555554          4444 4455666666554233333333332355


Q ss_pred             cEEEeCCCc
Q 018404          238 DIYFEHVGG  246 (356)
Q Consensus       238 d~vid~~g~  246 (356)
                      .+|+-++|-
T Consensus        70 ~~ViGTTG~   78 (135)
T d1yl7a1          70 HAVVGTTGF   78 (135)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEecccc
Confidence            566655554

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.95  E-value=0.0059  Score=49.70  Aligned_cols=37  Identities=27%  Similarity=0.188  Sum_probs=31.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchh
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKV  194 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~  194 (356)
                      .+|||+||+|.+|..++..+...|.  .|+...+++++.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~   42 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK   42 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH
Confidence            5899999999999999999888885  677777776664

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.95  E-value=0.0081  Score=49.28  Aligned_cols=104  Identities=15%  Similarity=0.140  Sum_probs=66.6

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE------------E
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA------------F  217 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v------------v  217 (356)
                      ....+.++.+||..| +|. |..+..||+ .|++|++++.|++-+          +.++++.+....            .
T Consensus        39 ~~l~~~~~~rvLd~G-CG~-G~~a~~LA~-~G~~V~gvD~S~~ai----------~~a~~~~~~~~~~~~~~~~~~~~~~  105 (229)
T d2bzga1          39 TFLKGKSGLRVFFPL-CGK-AVEMKWFAD-RGHSVVGVEISELGI----------QEFFTEQNLSYSEEPITEIPGTKVF  105 (229)
T ss_dssp             HHHTTCCSCEEEETT-CTT-CTHHHHHHH-TTCEEEEECSCHHHH----------HHHHHHTTCCEEEEECTTSTTCEEE
T ss_pred             HhcCCCCCCEEEEeC-CCC-cHHHHHHHh-CCCcEEEEeCCHHHH----------HHHHHHhhccccccchhccccccee
Confidence            345678899999998 554 888888876 699999999998887          666644432111            0


Q ss_pred             ecCCc------ccHHHHHHHhCCCCccEEEeCCCc---------hHHHHHHHhhccCCeEEEEcc
Q 018404          218 NYKEE------NDLDAALKRCFPEGIDIYFEHVGG---------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       218 ~~~~~------~~~~~~~~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .....      .++. .+.....+.+|+|+++.--         ..+..+.++|+|+|+++....
T Consensus       106 ~~~~~~v~~~~~d~~-~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         106 KSSSGNISLYCCSIF-DLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             EETTSSEEEEESCGG-GGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             eecCCcEEEEEcchh-hccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence            00000      0110 1111112378999986531         356789999999999876654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.92  E-value=0.0055  Score=42.66  Aligned_cols=37  Identities=14%  Similarity=0.069  Sum_probs=32.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      +|.+|+|+| .|..|+++++++...|++|++.+.+...
T Consensus         4 ~~K~v~ViG-lG~sG~s~a~~L~~~g~~v~~~D~~~~~   40 (93)
T d2jfga1           4 QGKNVVIIG-LGLTGLSCVDFFLARGVTPRVMDTRMTP   40 (93)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESSSSC
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHCCCEEEEeeCCcCc
Confidence            467899999 7999999999999999999999986553

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.90  E-value=0.038  Score=45.36  Aligned_cols=93  Identities=16%  Similarity=0.130  Sum_probs=61.4

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCC-EEEecCCcccHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFD-DAFNYKEENDLD  226 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~-~vv~~~~~~~~~  226 (356)
                      .....+..+||=.| +|. |..+..+++ .|++|++++.+++-+          +.+++   +.+.. .++..    +  
T Consensus        36 ~~~~~~~~~iLDiG-cGt-G~~~~~l~~-~~~~v~gvD~s~~mi----------~~a~~~~~~~~~~i~~~~~----d--   96 (251)
T d1wzna1          36 EDAKREVRRVLDLA-CGT-GIPTLELAE-RGYEVVGLDLHEEML----------RVARRKAKERNLKIEFLQG----D--   96 (251)
T ss_dssp             HTCSSCCCEEEEET-CTT-CHHHHHHHH-TTCEEEEEESCHHHH----------HHHHHHHHHTTCCCEEEES----C--
T ss_pred             HhcCCCCCEEEEeC-CCC-Cccchhhcc-cceEEEEEeeccccc----------cccccccccccccchheeh----h--
Confidence            34566778999998 443 788888776 589999999998776          54442   33432 22222    1  


Q ss_pred             HHHHHhCC-CCccEEEeCCCc----------hHHHHHHHhhccCCeEEE
Q 018404          227 AALKRCFP-EGIDIYFEHVGG----------KMLDAVLLNMRLHGRIAA  264 (356)
Q Consensus       227 ~~~~~~~~-~~~d~vid~~g~----------~~~~~~~~~l~~~G~~v~  264 (356)
                        +.++.. +.+|+|+...+.          ..++.+.++|+|+|.++.
T Consensus        97 --~~~l~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1          97 --VLEIAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             --GGGCCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             --hhhcccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence              122222 379998865432          256788999999999875

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.81  E-value=0.033  Score=42.58  Aligned_cols=100  Identities=18%  Similarity=0.172  Sum_probs=72.6

Q ss_pred             HHHHHHHHcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc
Q 018404          144 AWAGFYEICA-PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE  222 (356)
Q Consensus       144 A~~~l~~~~~-~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~  222 (356)
                      .+.++.+... +-.|.+++|.| -|-+|.-.++-+|.+|++|+++...+-+.          -++. .-|. .+.     
T Consensus         9 ~~d~i~r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~a----------lqA~-mdGf-~v~-----   70 (163)
T d1v8ba1           9 LPDGLMRATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICA----------IQAV-MEGF-NVV-----   70 (163)
T ss_dssp             HHHHHHHHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHH----------HHHH-TTTC-EEC-----
T ss_pred             HHHHHHHHhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhh----------HHHH-hcCC-ccC-----
Confidence            3444444433 46899999999 99999999999999999999999887653          2222 2233 221     


Q ss_pred             ccHHHHHHHhCCCCccEEEeCCCch-H-HHHHHHhhccCCeEEEEcc
Q 018404          223 NDLDAALKRCFPEGIDIYFEHVGGK-M-LDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       223 ~~~~~~~~~~~~~~~d~vid~~g~~-~-~~~~~~~l~~~G~~v~~g~  267 (356)
                       ...+.+.     ..|+++-++|.. . -...++.|+.+..+..+|.
T Consensus        71 -~~~~a~~-----~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GH  111 (163)
T d1v8ba1          71 -TLDEIVD-----KGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGH  111 (163)
T ss_dssp             -CHHHHTT-----TCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSS
T ss_pred             -chhHccc-----cCcEEEEcCCCCccccHHHHHHhhCCeEEEeccc
Confidence             3333443     379999999994 3 4677899999999888886

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.80  E-value=0.22  Score=37.29  Aligned_cols=96  Identities=14%  Similarity=0.024  Sum_probs=63.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC--
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE--  235 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~--  235 (356)
                      .+|.|.||.|.+|...+..++..|.+|.+.+++.+..          .... ..+.+.++.........+.+.+....  
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~----------~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~   78 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV----------AESI-LANADVVIVSVPINLTLETIERLKPYLT   78 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG----------HHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc----------cchh-hhhccccccccchhhheeeeeccccccc
Confidence            5899999899999999999999999999999887765          4443 45666666555432444444444332  


Q ss_pred             CccEEEeCCCc-h-HHHHHHHhhccCCeEEEEc
Q 018404          236 GIDIYFEHVGG-K-MLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       236 ~~d~vid~~g~-~-~~~~~~~~l~~~G~~v~~g  266 (356)
                      .=.+++|+.+. . ....+.+.+  .++++...
T Consensus        79 ~~~iiiD~~Svk~~~~~~~~~~~--~~~~v~~h  109 (152)
T d2pv7a2          79 ENMLLADLTSVKREPLAKMLEVH--TGAVLGLH  109 (152)
T ss_dssp             TTSEEEECCSCCHHHHHHHHHHC--SSEEEEEE
T ss_pred             CCceEEEecccCHHHHHHHHHHc--cCCEEEec
Confidence            22488898876 3 334443333  24565443

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.73  E-value=0.032  Score=44.48  Aligned_cols=86  Identities=23%  Similarity=0.271  Sum_probs=62.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...+++++.+|++|++.++.....          . .  ..+..      .. ++.+.+.+    
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~----------~-~--~~~~~------~~-~l~~~l~~----   96 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPE----------L-E--KKGYY------VD-SLDDLYKQ----   96 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHH----------H-H--HTTCB------CS-CHHHHHHH----
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCcccccc----------c-c--cceee------ec-cccccccc----
Confidence            478999999 99999999999999999999998765542          2 1  11221      11 55555654    


Q ss_pred             CccEEEeCCCc-h----HH-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+++-+... +    .+ ...++.|+++..+|.++.
T Consensus        97 -sDii~~~~plt~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1          97 -ADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             -CSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             -cccccccCCccccccccccHHHHhhhCCccEEEecCc
Confidence             6888877653 2    12 577889999999988875

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.64  E-value=0.0067  Score=49.94  Aligned_cols=38  Identities=21%  Similarity=0.137  Sum_probs=34.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ++++||+||++|+|.+.++.+...|++|+.++++++..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~   38 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE   38 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc
Confidence            35889999999999999999999999999999887754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.58  E-value=0.029  Score=43.18  Aligned_cols=86  Identities=16%  Similarity=0.157  Sum_probs=58.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-CEEEecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|.|.| .|.+|...+..++..|.+|++.+++++..          +.++ +.+. +...+..      +.+     ...
T Consensus         2 kI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~----------~~a~-~~~~~~~~~~~~------~~~-----~~~   58 (165)
T d2f1ka2           2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTC----------EKAV-ERQLVDEAGQDL------SLL-----QTA   58 (165)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTSCSEEESCG------GGG-----TTC
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHH----------HHHH-Hhhccceeeeec------ccc-----ccc
Confidence            578888 89999998888889999999999998887          7777 7775 3332211      111     147


Q ss_pred             cEEEeCCCchHHHHHHHhh----ccCCeEEEEcc
Q 018404          238 DIYFEHVGGKMLDAVLLNM----RLHGRIAACGM  267 (356)
Q Consensus       238 d~vid~~g~~~~~~~~~~l----~~~G~~v~~g~  267 (356)
                      |+||-|+-.......++.+    .++-.++.++.
T Consensus        59 DiIilavp~~~~~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          59 KIIFLCTPIQLILPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             SEEEECSCHHHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             ccccccCcHhhhhhhhhhhhhhcccccceeeccc
Confidence            8999888765554444444    44444445543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.57  E-value=0.0099  Score=43.57  Aligned_cols=66  Identities=11%  Similarity=0.048  Sum_probs=46.7

Q ss_pred             HHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh--ccccch-hHHHHHHHhhcCCC
Q 018404          145 WAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV--WLIPMQ-SQLVELLKNKFGFD  214 (356)
Q Consensus       145 ~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~--~~~~~~-~~~~~~~~~~~g~~  214 (356)
                      +..+..  .++++++|+|.| +|.+|.-++..++.+|.+|+.+.+++.-+  .+.++. +.+.+.++ +.|..
T Consensus        20 a~~l~~--~~~~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~~~~~l~-~~GV~   88 (121)
T d1d7ya2          20 ARRIQA--GLRPQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHA-AQGVD   88 (121)
T ss_dssp             HHHHHH--HCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHH-TTTCE
T ss_pred             HHHHHH--hhhcCCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccccccccCCHHHHHHHHHHHH-HCCcE
Confidence            344533  357789999999 89999999999999999999999887543  122222 33344555 66764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.48  E-value=0.04  Score=41.77  Aligned_cols=82  Identities=21%  Similarity=0.286  Sum_probs=58.2

Q ss_pred             EEEEecCCchHHHHHHH-HHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQ-FAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~-la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|.+.| .|.+|.+.++ |.+.-+.+|++.++++++.          +.+.+++|.. +.+..+  .    +     ...
T Consensus         2 kI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~----------~~l~~~~~~~-~~~~~~--~----v-----~~~   58 (152)
T d1yqga2           2 NVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKR----------ERLEKELGVE-TSATLP--E----L-----HSD   58 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHH----------HHHHHHTCCE-EESSCC--C----C-----CTT
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHH----------HHhhhhcccc-cccccc--c----c-----ccc
Confidence            478888 8999998877 5555457999999999988          7777467753 222211  1    1     136


Q ss_pred             cEEEeCCCchHHHHHHHhhccCCeEE
Q 018404          238 DIYFEHVGGKMLDAVLLNMRLHGRIA  263 (356)
Q Consensus       238 d~vid~~g~~~~~~~~~~l~~~G~~v  263 (356)
                      |+||-|+-...+...++-+++.++++
T Consensus        59 Div~lavkP~~~~~v~~~l~~~~~~v   84 (152)
T d1yqga2          59 DVLILAVKPQDMEAACKNIRTNGALV   84 (152)
T ss_dssp             SEEEECSCHHHHHHHHTTCCCTTCEE
T ss_pred             ceEEEecCHHHHHHhHHHHhhcccEE
Confidence            89998888777777777777776655

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.45  E-value=0.029  Score=42.65  Aligned_cols=86  Identities=13%  Similarity=0.147  Sum_probs=64.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      +|.+.| +|.+|.+.+.-....|.++++..++.++.          +.+.+++|....    .  +..+.+.     ..|
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~----------~~l~~~~g~~~~----~--~~~~~~~-----~~d   59 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERS----------KEIAEQLALPYA----M--SHQDLID-----QVD   59 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHH----------HHHHHHHTCCBC----S--SHHHHHH-----TCS
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhH----------Hhhccccceeee----c--hhhhhhh-----ccc
Confidence            477888 99999988876666688999999998887          666547776432    1  3333444     379


Q ss_pred             EEEeCCCchHHHHHHHhhccCCeEEEEc
Q 018404          239 IYFEHVGGKMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       239 ~vid~~g~~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +||-|+-...+...++.+.++..++.+.
T Consensus        60 vIilavkp~~~~~vl~~l~~~~~iis~~   87 (152)
T d2ahra2          60 LVILGIKPQLFETVLKPLHFKQPIISMA   87 (152)
T ss_dssp             EEEECSCGGGHHHHHTTSCCCSCEEECC
T ss_pred             eeeeecchHhHHHHhhhcccceeEeccc
Confidence            9999998888888888888877777554

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.43  E-value=0.0072  Score=52.76  Aligned_cols=39  Identities=23%  Similarity=0.420  Sum_probs=35.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ++.+|||+||+|-+|..+++.+...|.+|++++++....
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~   45 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV   45 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcc
Confidence            468999999999999999999999999999999877653

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.41  E-value=0.039  Score=43.45  Aligned_cols=87  Identities=24%  Similarity=0.274  Sum_probs=63.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.++.|.| .|.+|...+++++.+|++|++.++....           +... ..+...    .   ++.+.+.+    
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~-----------~~~~-~~~~~~----~---~l~ell~~----   98 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP-----------ARAA-QLGIEL----L---SLDDLLAR----   98 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH-----------HHHH-HHTCEE----C---CHHHHHHH----
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh-----------hHHh-hcCcee----c---cHHHHHhh----
Confidence            467999999 8999999999999999999999977655           3333 344321    1   45555554    


Q ss_pred             CccEEEeCCCc-h----HH-HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K----ML-DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~----~~-~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|.-+... +    .+ ...++.|+++..+|.++.
T Consensus        99 -sDiv~~~~Plt~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1          99 -ADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             -CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             -CCEEEEcCCCCchhhhhhhHHHHhhhCCCceEEEecc
Confidence             6888876653 2    12 577888999999988876

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.38  E-value=0.012  Score=50.01  Aligned_cols=37  Identities=11%  Similarity=0.186  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          156 KGEYIYVSAASG--AVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       156 ~g~~VlI~ga~g--~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +|+++||+||+|  |+|.+.++.+...|++|+.+.+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh
Confidence            588999999876  9999999999999999998887654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.24  E-value=0.031  Score=48.32  Aligned_cols=37  Identities=3%  Similarity=-0.023  Sum_probs=31.1

Q ss_pred             CCEEEEec--CCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          157 GEYIYVSA--ASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       157 g~~VlI~g--a~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      ++..||+|  ++.|+|.+.++.+-..|++|+.+.++...
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~   40 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVY   40 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhh
Confidence            56789999  44699999999999999999998876554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.0066  Score=49.88  Aligned_cols=39  Identities=15%  Similarity=0.172  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~  194 (356)
                      ++.+|||+||+|-+|...++.+...|.  +|++++|++...
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~   53 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF   53 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhh
Confidence            346899999999999999988887775  899999876553

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.22  E-value=0.015  Score=50.63  Aligned_cols=42  Identities=29%  Similarity=0.295  Sum_probs=37.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      -+.+|++|||+||+|-+|..+++.+...|.+|++++++.++.
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~   48 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL   48 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhH
Confidence            356799999999999999999988888899999999987765

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.04  E-value=0.12  Score=37.75  Aligned_cols=30  Identities=20%  Similarity=0.122  Sum_probs=26.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSA  188 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~  188 (356)
                      +|.|+|++|-+|.+..+++...+.+++...
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~i   31 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKV   31 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence            589999999999999999999898877654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.98  E-value=0.026  Score=48.45  Aligned_cols=31  Identities=16%  Similarity=0.266  Sum_probs=28.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAG  189 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~  189 (356)
                      +|||+||+|-+|...+..+...|.+|+++++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~   32 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            7999999999999999988888999999863

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=94.96  E-value=0.015  Score=48.22  Aligned_cols=36  Identities=17%  Similarity=0.252  Sum_probs=32.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      +.|||+||++|+|++.++.+...|++|+.+++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~   37 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE   37 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            368999999999999999999999999999987654

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=94.95  E-value=0.048  Score=40.19  Aligned_cols=91  Identities=19%  Similarity=0.127  Sum_probs=60.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEE-ecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAF-NYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +++|.| .|-+|..+++.+...|..|++++.++++.          +.++ +.+...++ |..+. +   .+.+..-..+
T Consensus         2 ~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~----------~~~~-~~~~~~~~gd~~~~-~---~l~~a~i~~a   65 (134)
T d2hmva1           2 QFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKV----------NAYA-SYATHAVIANATEE-N---ELLSLGIRNF   65 (134)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHH----------HHTT-TTCSEEEECCTTCT-T---HHHHHTGGGC
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHH----------HHHH-HhCCcceeeecccc-h---hhhccCCccc
Confidence            477888 79999999999999999999999999988          8777 66664333 22222 2   3333311257


Q ss_pred             cEEEeCCCch-HH---HHHHHhhccCCeEEEE
Q 018404          238 DIYFEHVGGK-ML---DAVLLNMRLHGRIAAC  265 (356)
Q Consensus       238 d~vid~~g~~-~~---~~~~~~l~~~G~~v~~  265 (356)
                      |.+|-+++.+ ..   -...+.+.+..+++..
T Consensus        66 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~iiar   97 (134)
T d2hmva1          66 EYVIVAIGANIQASTLTTLLLKELDIPNIWVK   97 (134)
T ss_dssp             SEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             cEEEEEcCchHHhHHHHHHHHHHcCCCcEEee
Confidence            8888888763 22   2333344455566544

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.87  E-value=0.074  Score=47.20  Aligned_cols=110  Identities=18%  Similarity=0.224  Sum_probs=67.9

Q ss_pred             HHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHh---h-------c
Q 018404          143 TAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKN---K-------F  211 (356)
Q Consensus       143 tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~-------~  211 (356)
                      ....++ +..++++|+++|=+|  .|+|..+.++|+..|+ +|++++.++...          +.++.   +       +
T Consensus       204 ~i~~Il-~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i----------~~Ak~~~~e~~~~~~~~  270 (406)
T d1u2za_         204 FLSDVY-QQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDAS----------DLTILQYEELKKRCKLY  270 (406)
T ss_dssp             HHHHHH-HHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHH----------HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHH-HHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHH----------HHHHHHHHHHhhhhhhh
Confidence            455556 557899999988877  7889999999999987 899999998766          33321   1       1


Q ss_pred             CC---CEEEecCCcccHHHHHHHhCCCCccEEEeCCC---c---hHHHHHHHhhccCCeEEEEc
Q 018404          212 GF---DDAFNYKEENDLDAALKRCFPEGIDIYFEHVG---G---KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       212 g~---~~vv~~~~~~~~~~~~~~~~~~~~d~vid~~g---~---~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +.   ...+.........+...... ..+|+++-..-   .   ..+.++.+.|+|||++|..-
T Consensus       271 g~~~~~~~~~~~~~f~~~~~~d~~~-~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         271 GMRLNNVEFSLKKSFVDNNRVAELI-PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             TBCCCCEEEEESSCSTTCHHHHHHG-GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccccceeeeeechhhcccccccc-ccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            21   11111111000001111111 13677775321   1   35678888999999998754

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.77  E-value=0.046  Score=43.34  Aligned_cols=89  Identities=22%  Similarity=0.201  Sum_probs=62.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      -.|.+|.|+| .|.+|...+++++.+|++|+..++.....           ... ..+....    .  ++.+.+.+   
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~-----------~~~-~~~~~~~----~--~l~~ll~~---  104 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDG-----------VER-ALGLQRV----S--TLQDLLFH---  104 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTT-----------HHH-HHTCEEC----S--SHHHHHHH---
T ss_pred             eeCceEEEec-cccccccceeeeeccccceeeccCccccc-----------chh-hhccccc----c--chhhcccc---
Confidence            3578999999 99999999999999999999998775542           222 3343211    1  45555554   


Q ss_pred             CCccEEEeCCCc-h----H-HHHHHHhhccCCeEEEEcc
Q 018404          235 EGIDIYFEHVGG-K----M-LDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g~-~----~-~~~~~~~l~~~G~~v~~g~  267 (356)
                        .|+|.-+... +    . -...+..|+++..+|.++.
T Consensus       105 --sD~i~~~~plt~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         105 --SDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             --CSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             --CCEEEEeecccccchhhhhHHHHhccCCCCeEEecCC
Confidence              5777765553 2    1 1466788899988888875

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.70  E-value=0.022  Score=44.72  Aligned_cols=36  Identities=17%  Similarity=0.223  Sum_probs=33.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      +|.|+||+|++|.+.++.+...|++|++..|++++.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~   37 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKA   37 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            578888899999999999999999999999998887

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=94.55  E-value=0.18  Score=38.54  Aligned_cols=135  Identities=13%  Similarity=0.111  Sum_probs=78.8

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          159 YIYVSAASGAVGQL-VGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       159 ~VlI~ga~g~vG~~-ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      +|.|.| +|.+|.. .+...+.. +..+++.++++++.          +.+.++++...+++     ++.+.+.    ..
T Consensus         3 rvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~----------~~~~~~~~~~~~~~-----~~~~ll~----~~   62 (167)
T d1xeaa1           3 KIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVL----------GTLATRYRVSATCT-----DYRDVLQ----YG   62 (167)
T ss_dssp             EEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHH----------HHHHHHTTCCCCCS-----STTGGGG----GC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHH----------HHHHHhcccccccc-----cHHHhcc----cc
Confidence            578999 8999854 45556555 56777666776666          55554777654332     2222222    25


Q ss_pred             ccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHH-hhccee-eceeeecchhhHHHHHHHHHH
Q 018404          237 IDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVV-YKRIRM-EGFVVFDYFPQYSRFLDAVLP  313 (356)
Q Consensus       237 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~l~~~~~  313 (356)
                      +|+|+-|+.. .++..+..++..+-+ |.+..+-..+.   .......... .++..+ .+     + .++...+.++.+
T Consensus        63 iD~V~I~tp~~~H~~~~~~al~~gk~-V~~EKP~~~~~---~e~~~l~~~a~~~~~~~~vg-----~-~r~~~~~~~~~~  132 (167)
T d1xeaa1          63 VDAVMIHAATDVHSTLAAFFLHLGIP-TFVDKPLAASA---QECENLYELAEKHHQPLYVG-----F-NGFDAMVQDWLQ  132 (167)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTTCC-EEEESCSCSSH---HHHHHHHHHHHHTTCCEEEE-----C-GTHHHHHHHHHH
T ss_pred             cceecccccccccccccccccccccc-cccCCCCcCCH---HHHHHHHHHHHHcCCEEEEE-----e-CcCCHHHHHHHH
Confidence            8999999998 677888888887655 55654322110   0011122222 222221 22     1 234566788888


Q ss_pred             HHHcCCCccc
Q 018404          314 YIREGKVVYV  323 (356)
Q Consensus       314 ~~~~g~l~~~  323 (356)
                      .+..|++-..
T Consensus       133 ~~~~G~ig~~  142 (167)
T d1xeaa1         133 VAAAGKLPTH  142 (167)
T ss_dssp             HHHHTCCCHH
T ss_pred             HhhcCCCCcE
Confidence            9999988643

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.47  E-value=0.072  Score=43.33  Aligned_cols=99  Identities=14%  Similarity=0.129  Sum_probs=65.0

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhh---cCCCEEEecCCcccHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNK---FGFDDAFNYKEENDLD  226 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~  226 (356)
                      ..++||++||=.|+  |.|..+..+++..|.  +|++++.++...          +.+++.   .+....+..+.. . .
T Consensus        69 l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l----------~~a~~~a~~~~~~~~i~~d~~-~-~  134 (227)
T d1g8aa_          69 FPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVL----------RELVPIVEERRNIVPILGDAT-K-P  134 (227)
T ss_dssp             CCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHH----------HHHHHHHSSCTTEEEEECCTT-C-G
T ss_pred             cccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHH----------HHHHHHHHhcCCceEEEEECC-C-c
Confidence            56899999999984  568889999999864  999999998877          555422   232222222211 1 1


Q ss_pred             HHHHHhCCCCccEEEeCCCc-----hHHHHHHHhhccCCeEEEE
Q 018404          227 AALKRCFPEGIDIYFEHVGG-----KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~  265 (356)
                      +... .....+|++|..+..     ..+..+.+.|+++|+++.+
T Consensus       135 ~~~~-~~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         135 EEYR-ALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             GGGT-TTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccc-ccccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            1111 111268888765442     2678889999999998865

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.46  E-value=0.079  Score=42.38  Aligned_cols=94  Identities=15%  Similarity=0.080  Sum_probs=60.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCC-EEEecCCcccHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFD-DAFNYKEENDLDAA  228 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~-~vv~~~~~~~~~~~  228 (356)
                      -+.++++||=+| + |.|..+..+++ .|++|++++.+++.+          +.+++   ..+.. ..+..+.. +    
T Consensus        34 ~l~~~~~ILDiG-c-G~G~~~~~la~-~~~~v~giD~S~~~i----------~~ak~~~~~~~~~~~~~~~d~~-~----   95 (226)
T d1ve3a1          34 YMKKRGKVLDLA-C-GVGGFSFLLED-YGFEVVGVDISEDMI----------RKAREYAKSRESNVEFIVGDAR-K----   95 (226)
T ss_dssp             SCCSCCEEEEET-C-TTSHHHHHHHH-TTCEEEEEESCHHHH----------HHHHHHHHHTTCCCEEEECCTT-S----
T ss_pred             hcCCCCEEEEEC-C-CcchhhhhHhh-hhcccccccccccch----------hhhhhhhccccccccccccccc-c----
Confidence            367889999998 3 44778888886 589999999998877          55542   23332 22222111 1    


Q ss_pred             HHHhCCCCccEEEeCCC-----c----hHHHHHHHhhccCCeEEEE
Q 018404          229 LKRCFPEGIDIYFEHVG-----G----KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~  265 (356)
                      + ....+.+|+|+-...     .    ..++.+.+.|+|||+++..
T Consensus        96 l-~~~~~~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1          96 L-SFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             C-CSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             c-cccCcCceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            1 111237899876333     1    2577889999999998754

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.45  E-value=0.18  Score=38.05  Aligned_cols=147  Identities=15%  Similarity=0.013  Sum_probs=77.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHHHh
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC---YVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~---~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~~~  232 (356)
                      |-+|.|.||+|-+|.-.++++..+..   ++...+++...-          ..+. ..... ...+..+. +        
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G----------~~~~-~~~~~~~~~~~~~~-~--------   60 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAG----------KSLK-FKDQDITIEETTET-A--------   60 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTT----------CEEE-ETTEEEEEEECCTT-T--------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccc----------cccc-ccCCcccccccchh-h--------
Confidence            45799999999999999999988843   555555432221          1111 11111 11111111 1        


Q ss_pred             CCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceeeecchhhHHHHHHHH
Q 018404          233 FPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAV  311 (356)
Q Consensus       233 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  311 (356)
                       ....|++|-+.+. .....+-+.+..+-+++..+..-+..  .. .+.....+....+.-...... .|.-....+.-+
T Consensus        61 -~~~~d~~f~~~~~~~s~~~~~~~~~~~~~VIDlSsdfR~~--~~-~~~~~pe~n~~~~~~~~~iIA-nPgC~tt~i~~l  135 (154)
T d2gz1a1          61 -FEGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQN--PD-VPLVVPEVNAHALDAHNGIIA-CPNAAWNSVQIA  135 (154)
T ss_dssp             -TTTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTC--TT-SCBCCHHHHGGGGGGCCSEEE-CCCTHHHHHHHH
T ss_pred             -hhhhhhhhhccCccchhhHHhhhccccceehhcChhhhcc--CC-cccccchhhHHHhcCcCceEE-CCCCHHHHHHHH
Confidence             1258999999998 45566666777888888887533221  11 111111122111111111111 122223334446


Q ss_pred             HHHHHcCCCccceeeee
Q 018404          312 LPYIREGKVVYVEDVAD  328 (356)
Q Consensus       312 ~~~~~~g~l~~~i~~~~  328 (356)
                      ..++++|.+++.....|
T Consensus       136 ~PL~~~~lik~~~~~~~  152 (154)
T d2gz1a1         136 ETLHERGLVRPTAELKF  152 (154)
T ss_dssp             HHHHHTTCCSCCSSCCS
T ss_pred             HHHHHhcCCCccceeee
Confidence            78888999987765443

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.44  E-value=0.037  Score=48.86  Aligned_cols=32  Identities=16%  Similarity=0.076  Sum_probs=29.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA  188 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~  188 (356)
                      |.+|||+||+|-+|..++..+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            67899999999999999999999999999986

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.41  E-value=0.56  Score=36.11  Aligned_cols=89  Identities=13%  Similarity=0.123  Sum_probs=60.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeC-CcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHHHHhC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~~~~  233 (356)
                      +|.|.| +|.+|..-++..+.. ++++++++. +.++.          +.+.++++..   .++  .   ++.+.+..  
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~----------~~~~~~~~~~~~~~~~--~---~~~~ll~~--   64 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKA----------KAFATANNYPESTKIH--G---SYESLLED--   64 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHH----------HHHHHHTTCCTTCEEE--S---SHHHHHHC--
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCcccc----------ccchhccccccceeec--C---cHHHhhhc--
Confidence            578899 899998888777776 678887754 44444          4443367652   222  1   45544542  


Q ss_pred             CCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEcc
Q 018404          234 PEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       234 ~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                       ..+|+|+.|+.. ..+..+..++..+=. |.+..
T Consensus        65 -~~iD~v~I~tp~~~h~~~~~~~l~~g~~-v~~EK   97 (184)
T d1ydwa1          65 -PEIDALYVPLPTSLHVEWAIKAAEKGKH-ILLEK   97 (184)
T ss_dssp             -TTCCEEEECCCGGGHHHHHHHHHTTTCE-EEECS
T ss_pred             -cccceeeecccchhhcchhhhhhhccce-eeccc
Confidence             269999999988 678888888886644 55654

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.40  E-value=0.21  Score=42.91  Aligned_cols=113  Identities=16%  Similarity=0.128  Sum_probs=67.6

Q ss_pred             HHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhcccc-chhHHHHHHHhhcCCC----EEEe
Q 018404          145 WAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIP-MQSQLVELLKNKFGFD----DAFN  218 (356)
Q Consensus       145 ~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~----~vv~  218 (356)
                      .+.+ ...+++++++||=.|  .|.|..+.++|+..++ ++++++.+++...+-. +..++....+ .+|..    .++.
T Consensus       141 ~~~~-~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~-~~g~~~~~i~~~~  216 (328)
T d1nw3a_         141 AQMI-DEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMK-WYGKKHAEYTLER  216 (328)
T ss_dssp             HHHH-HHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHH-HHTCCCCCEEEEE
T ss_pred             HHHH-HHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhh-hccccCCceEEEE
Confidence            3444 567899999998888  6789999999999987 8999999987651000 0011111112 23321    2222


Q ss_pred             cCCc-ccHHHHHHHhCCCCccEEEeCCC---c---hHHHHHHHhhccCCeEEEEc
Q 018404          219 YKEE-NDLDAALKRCFPEGIDIYFEHVG---G---KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       219 ~~~~-~~~~~~~~~~~~~~~d~vid~~g---~---~~~~~~~~~l~~~G~~v~~g  266 (356)
                      .+-. ..+.+.+.+     +|+|+-..-   .   ..+.+.++.|+|||++|..-
T Consensus       217 gd~~~~~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         217 GDFLSEEWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             CCTTSHHHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             CcccccccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            2111 133333332     577774221   1   25677888999999998754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.31  E-value=0.053  Score=38.80  Aligned_cols=40  Identities=15%  Similarity=0.208  Sum_probs=34.2

Q ss_pred             CCCC-CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          154 PKKG-EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       154 ~~~g-~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      +.++ .+|.|+| +|-+|.+.++-|+.+|.++++.+.+++..
T Consensus         7 ~~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~P   47 (111)
T d1kjqa2           7 LRPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAP   47 (111)
T ss_dssp             TSTTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCG
T ss_pred             CCCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCc
Confidence            3444 4699999 89999999999999999999999876653

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.30  E-value=0.038  Score=44.16  Aligned_cols=84  Identities=18%  Similarity=0.256  Sum_probs=58.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      -.|.+|+|.| .|.+|..+++++...|++|++.+...++.          .... .+|...+ +..   +       +..
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~----------~~~~-~~g~~~~-~~~---~-------~~~   81 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERV----------AHAV-ALGHTAV-ALE---D-------VLS   81 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTCEEC-CGG---G-------GGG
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHH----------HHHH-hhccccc-Ccc---c-------ccc
Confidence            3688999999 99999999999999999999999887777          6666 7776422 211   1       112


Q ss_pred             CCccEEEeCCCch-HHHHHHHhhccCCeEE
Q 018404          235 EGIDIYFEHVGGK-MLDAVLLNMRLHGRIA  263 (356)
Q Consensus       235 ~~~d~vid~~g~~-~~~~~~~~l~~~G~~v  263 (356)
                      -.+|+++=|..+. .-....+.++  .++|
T Consensus        82 ~~~DI~iPcA~~~~I~~~~a~~i~--ak~i  109 (201)
T d1c1da1          82 TPCDVFAPCAMGGVITTEVARTLD--CSVV  109 (201)
T ss_dssp             CCCSEEEECSCSCCBCHHHHHHCC--CSEE
T ss_pred             ccceeeecccccccccHHHHhhhh--hhee
Confidence            2688888776653 2234444443  3444

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.29  E-value=0.042  Score=45.82  Aligned_cols=98  Identities=16%  Similarity=0.076  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAAL  229 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~  229 (356)
                      .+++|++||-.+  .|+|..++.+|+.-+++|++++.+++..      +.+.+.++ ..|.+   .+++.+.        
T Consensus       104 ~~~~g~~VlD~~--aG~G~~~l~~a~~~~~~V~avd~n~~a~------~~~~~N~~-~n~l~~~v~~~~~D~--------  166 (260)
T d2frna1         104 VAKPDELVVDMF--AGIGHLSLPIAVYGKAKVIAIEKDPYTF------KFLVENIH-LNKVEDRMSAYNMDN--------  166 (260)
T ss_dssp             HCCTTCEEEETT--CTTTTTHHHHHHHTCCEEEEECCCHHHH------HHHHHHHH-HTTCTTTEEEECSCT--------
T ss_pred             hcCCccEEEECc--ceEcHHHHHHHHhCCcEEEEecCCHHHH------HHHHHHHH-HhCCCceEEEEEcch--------
Confidence            368999999887  4667777888887557999999998876      22223333 34553   2332221        


Q ss_pred             HHhCCC-CccEEE-eCC-Cc-hHHHHHHHhhccCCeEEEEcc
Q 018404          230 KRCFPE-GIDIYF-EHV-GG-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       230 ~~~~~~-~~d~vi-d~~-g~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .++... .+|.|+ +-- .+ ..+..+++.++++|.+.....
T Consensus       167 ~~~~~~~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~  208 (260)
T d2frna1         167 RDFPGENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT  208 (260)
T ss_dssp             TTCCCCSCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred             HHhccCCCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEec
Confidence            122223 688555 432 23 688899999999998866543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.29  E-value=0.039  Score=45.95  Aligned_cols=56  Identities=13%  Similarity=0.116  Sum_probs=39.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEe
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFN  218 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~  218 (356)
                      +|||+||+|-+|..++..++..|.+|+++++++-..   -+.+++.+.++ ....+.+++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~---~d~~~~~~~l~-~~~~d~vih   58 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDI---TNVLAVNKFFN-EKKPNVVIN   58 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCT---TCHHHHHHHHH-HHCCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccC---CCHHHHHHHHH-HcCCCEEEe
Confidence            589999999999999999999999999998764322   12233334444 444455544

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.21  E-value=0.016  Score=46.93  Aligned_cols=107  Identities=11%  Similarity=0.106  Sum_probs=64.9

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDL  225 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  225 (356)
                      |..+.+..+..+||-+|  ++.|..++.+|+.+  +.+|+.++.+++..      +.+.+.++ ..|....+..... +.
T Consensus        48 L~~lv~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~------~~a~~~~~-~~gl~~~i~l~~G-d~  117 (214)
T d2cl5a1          48 MDAVIREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYA------AITQQMLN-FAGLQDKVTILNG-AS  117 (214)
T ss_dssp             HHHHHHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHH------HHHHHHHH-HHTCGGGEEEEES-CH
T ss_pred             HHHHHHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHH------HHHHHHHH-HcCCCccceeeec-cc
Confidence            33334445567999998  66788888899876  57999999887765      22334444 5676432333222 34


Q ss_pred             HHHHHHh---CC-CCccEEEeCCCch------HHHHHHHhhccCCeEEE
Q 018404          226 DAALKRC---FP-EGIDIYFEHVGGK------MLDAVLLNMRLHGRIAA  264 (356)
Q Consensus       226 ~~~~~~~---~~-~~~d~vid~~g~~------~~~~~~~~l~~~G~~v~  264 (356)
                      .+.+.++   .. +.+|++|--...+      .+..+++.|+|||.++.
T Consensus       118 ~e~l~~l~~~~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         118 QDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             HHHGGGHHHHSCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cccccchhhcccccccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            4443332   22 2789887543322      23455677999997653

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.20  E-value=0.031  Score=42.81  Aligned_cols=87  Identities=16%  Similarity=0.064  Sum_probs=56.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-----EEEecCCcccHHHHHHHhC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-----DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~vv~~~~~~~~~~~~~~~~  233 (356)
                      +|+|+| +|.+|.+....+...|.+|..+++++++.          +... ..+..     ..+...    ..+.+.   
T Consensus         2 kI~IiG-aG~iG~~~a~~L~~~G~~V~~~~r~~~~~----------~~~~-~~~~~~~~~~~~~~~~----~~~~~~---   62 (167)
T d1ks9a2           2 KITVLG-CGALGQLWLTALCKQGHEVQGWLRVPQPY----------CSVN-LVETDGSIFNESLTAN----DPDFLA---   62 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSE----------EEEE-EECTTSCEEEEEEEES----CHHHHH---
T ss_pred             EEEEEC-cCHHHHHHHHHHHHCCCceEEEEcCHHHh----------hhhc-cccCCccccccccccc----hhhhhc---
Confidence            589999 69999998888888999999999988765          3222 22321     111111    122222   


Q ss_pred             CCCccEEEeCCCchHHHHHHHhh----ccCCeEEEEc
Q 018404          234 PEGIDIYFEHVGGKMLDAVLLNM----RLHGRIAACG  266 (356)
Q Consensus       234 ~~~~d~vid~~g~~~~~~~~~~l----~~~G~~v~~g  266 (356)
                        .+|++|-|+.......+++.+    .++..++.+.
T Consensus        63 --~~D~iii~vka~~~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          63 --TSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             --TCSEEEECSCGGGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred             --ccceEEEeecccchHHHHHhhccccCcccEEeecc
Confidence              589999999986555555444    4455666553

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.14  E-value=0.055  Score=46.42  Aligned_cols=34  Identities=18%  Similarity=0.229  Sum_probs=31.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      .++||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~   35 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRS   35 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCC
Confidence            5799999999999999999999999999999753

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.09  E-value=0.72  Score=35.40  Aligned_cols=138  Identities=12%  Similarity=0.111  Sum_probs=77.5

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-C-CEEEEEeCC-cchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          159 YIYVSAASGAVGQL-VGQFAKLM-G-CYVVGSAGS-REKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       159 ~VlI~ga~g~vG~~-ai~la~~~-g-~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      +|.|.| +|.+|.. -+...+.. + .++++++.. +++.          +.+.++++...+.+     ++.+.+..   
T Consensus         5 rigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~----------~~~~~~~~~~~~~~-----~~~ell~~---   65 (181)
T d1zh8a1           5 RLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHA----------EEFAKMVGNPAVFD-----SYEELLES---   65 (181)
T ss_dssp             EEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHH----------HHHHHHHSSCEEES-----CHHHHHHS---
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhh----------hhhhccccccceee-----eeeccccc---
Confidence            688999 8999864 45666655 3 478876644 4444          44443777655432     45555542   


Q ss_pred             CCccEEEeCCCc-hHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhh-cceeeceeeecc-hhhHHHHHHHH
Q 018404          235 EGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYK-RIRMEGFVVFDY-FPQYSRFLDAV  311 (356)
Q Consensus       235 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~l~~~  311 (356)
                      ..+|+|+.|+.. .++..+..++..+ .=|.+..+-..+..   ..........+ +..+  +....+ ...+...++.+
T Consensus        66 ~~id~v~I~tp~~~h~~~~~~al~~g-k~V~~EKPl~~~~~---e~~~l~~~~~~~~~~~--~v~~~~R~~~~~~~~~~~  139 (181)
T d1zh8a1          66 GLVDAVDLTLPVELNLPFIEKALRKG-VHVICEKPISTDVE---TGKKVVELSEKSEKTV--YIAENFRENSYQKEFEDF  139 (181)
T ss_dssp             SCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESSSSSSHH---HHHHHHHHHHHCSSCE--EEECGGGCCHHHHHHHHH
T ss_pred             cccceeeccccccccccccccccccc-hhhhcCCCCcCCHH---HHHHHHHHHHHhCCeE--EEEeeccccccCHHHHHH
Confidence            369999999988 5677777777765 44556543221100   00111222222 2221  111111 12345678888


Q ss_pred             HHHHHcCCCc
Q 018404          312 LPYIREGKVV  321 (356)
Q Consensus       312 ~~~~~~g~l~  321 (356)
                      .+++.+|++-
T Consensus       140 ~~~i~~G~ig  149 (181)
T d1zh8a1         140 YQVVAEGKPN  149 (181)
T ss_dssp             HHHHHSCCCC
T ss_pred             HHHHHCCCCc
Confidence            9999998875

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.09  E-value=0.12  Score=40.69  Aligned_cols=96  Identities=14%  Similarity=0.098  Sum_probs=59.7

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE-EecCCcccHHHHHHHh
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA-FNYKEENDLDAALKRC  232 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~~~  232 (356)
                      +.+| +||=+| + |.|..+..+++ .|++|++++.+++.+      +.+++.++ +.+.+.+ +...+       +.+.
T Consensus        29 ~~~g-rvLDiG-c-G~G~~~~~la~-~g~~v~gvD~s~~~l------~~a~~~~~-~~~~~~~~~~~~d-------~~~~   90 (198)
T d2i6ga1          29 VAPG-RTLDLG-C-GNGRNSLYLAA-NGYDVTAWDKNPASM------ANLERIKA-AEGLDNLQTDLVD-------LNTL   90 (198)
T ss_dssp             SCSC-EEEEET-C-TTSHHHHHHHH-TTCEEEEEESCHHHH------HHHHHHHH-HTTCTTEEEEECC-------TTTC
T ss_pred             CCCC-cEEEEC-C-CCCHHHHHHHH-HhhhhccccCcHHHH------HHHHHHhh-hccccchhhhhee-------cccc
Confidence            4555 899998 4 48888888876 589999999998876      12222333 4454321 11111       1111


Q ss_pred             -CCCCccEEEeCCC-----c----hHHHHHHHhhccCCeEEEEcc
Q 018404          233 -FPEGIDIYFEHVG-----G----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       233 -~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                       ..+.+|+|+...-     .    ..++.+.++|+|+|+++....
T Consensus        91 ~~~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          91 TFDGEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             CCCCCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             cccccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence             1236899986321     1    266788889999999887654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.08  E-value=0.094  Score=43.98  Aligned_cols=37  Identities=8%  Similarity=0.055  Sum_probs=32.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      ..+|||+||+|-+|...+..+...|.+|++++|+...
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~   39 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVV   39 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcc
Confidence            4579999999999999999888899999999987553

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.05  E-value=0.21  Score=37.93  Aligned_cols=86  Identities=10%  Similarity=0.084  Sum_probs=61.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      +|-|.| .|.+|...+.-+...|.+|++.++++++.          +.+. +.+.. +.+     +..+.+++     .|
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~----------~~~~-~~~~~-~~~-----~~~e~~~~-----~d   58 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAI----------ADVI-AAGAE-TAS-----TAKAIAEQ-----CD   58 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHH----------HHHH-HTTCE-ECS-----SHHHHHHH-----CS
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchh----------HHHH-Hhhhh-hcc-----cHHHHHhC-----CC
Confidence            477888 99999999988888899999999999988          7777 66653 211     33444443     68


Q ss_pred             EEEeCCCc-hHHHH-------HHHhhccCCeEEEEcc
Q 018404          239 IYFEHVGG-KMLDA-------VLLNMRLHGRIAACGM  267 (356)
Q Consensus       239 ~vid~~g~-~~~~~-------~~~~l~~~G~~v~~g~  267 (356)
                      ++|-|+.. +....       ....+.++-.++.+++
T Consensus        59 ~ii~~v~~~~~v~~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          59 VIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             EEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             eEEEEcCCHHHHHHHHhCCcchhhccCCCCEEEECCC
Confidence            99999876 44433       3345566666777665

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=94.05  E-value=0.05  Score=47.40  Aligned_cols=34  Identities=18%  Similarity=0.268  Sum_probs=29.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      ..|||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            5789999999999999999999999999999854

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.03  E-value=0.17  Score=40.12  Aligned_cols=85  Identities=21%  Similarity=0.255  Sum_probs=60.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|..++++++.+|++|++.++.....          .    ....    .+.   ++.+.+.+    
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~----------~----~~~~----~~~---~l~~l~~~----   97 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKG----------D----HPDF----DYV---SLEDLFKQ----   97 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSS----------C----CTTC----EEC---CHHHHHHH----
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCccchh----------h----hcch----hHH---HHHHHHHh----
Confidence            467999999 99999999999999999999999765542          1    1111    111   44444444    


Q ss_pred             CccEEEeCCCc-h-----HHHHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K-----MLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~-----~~~~~~~~l~~~G~~v~~g~  267 (356)
                       .|++.-+... +     .-...++.|+++..+|.++.
T Consensus        98 -~D~v~~~~plt~~T~~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1          98 -SDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             -CSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred             -cccceeeecccccccccccHHHhhccCCceEEEeccc
Confidence             5777765543 2     12577889999999998876

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.97  E-value=0.17  Score=36.63  Aligned_cols=44  Identities=14%  Similarity=-0.008  Sum_probs=36.2

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +.....-.++.+|+|.| +|.+|+-+++.++.+|.+|+.+.+.+.
T Consensus        21 i~~~~~~~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          21 LKQKTVDPEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             HHHHHTCTTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             HHHHhhccCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            33444445678999999 899999999999999999999988754

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.93  E-value=0.39  Score=36.88  Aligned_cols=96  Identities=15%  Similarity=0.051  Sum_probs=62.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCc--chhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC--
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSR--EKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF--  233 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~--  233 (356)
                      +|.|+| -|-+|...+..+... ..+++++....  +..          ..+. +++.+......+  . .....+..  
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~----------~~l~-~~~~~~~~~~~~--~-~~~~~~~~~~   68 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEA----------YRAK-ELGIPVYAASEE--F-IPRFEKEGFE   68 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHH----------HHHH-HTTCCEEESSGG--G-HHHHHHHTCC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHH----------HHhh-hcCceeeccccc--c-eeeecccCcc
Confidence            689999 899999888877665 45777776422  222          4455 666543321111  1 11111110  


Q ss_pred             --------CCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEcccc
Q 018404          234 --------PEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       234 --------~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                              ..++|+|+||+|. .....+-..+..|-+.|.++.+.
T Consensus        69 ~~~~~~~~~~~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          69 VAGTLNDLLEKVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             CSCBHHHHHTTCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             ccchhhhhhccCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence                    0269999999998 67778888999999999887743

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=93.92  E-value=0.093  Score=45.12  Aligned_cols=31  Identities=19%  Similarity=0.122  Sum_probs=28.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAG  189 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~  189 (356)
                      +|||+||+|-+|..++..+...|.+|+++++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~   32 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            5999999999999999999999999999875

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.92  E-value=0.34  Score=36.66  Aligned_cols=95  Identities=14%  Similarity=0.101  Sum_probs=55.9

Q ss_pred             CEEEEecCCchHHH-HHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC-C
Q 018404          158 EYIYVSAASGAVGQ-LVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF-P  234 (356)
Q Consensus       158 ~~VlI~ga~g~vG~-~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~-~  234 (356)
                      =+|.|.| +|.+|. ..+++++.. ..+++++++.....       +-....+ ++|....  +    ...+.+.+.. .
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~-------~~~~~a~-~~~i~~~--~----~~~d~l~~~~~~   69 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS-------DGLARAQ-RMGVTTT--Y----AGVEGLIKLPEF   69 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTC-------HHHHHHH-HTTCCEE--S----SHHHHHHHSGGG
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhc-------cchhhhh-hcCCccc--c----cceeeeeecccc
Confidence            3789999 899986 567888876 45888887543221       0003455 7776432  2    2222333222 1


Q ss_pred             CCccEEEeCCCc-hHHHHH--HHhhccCCeEEEEcc
Q 018404          235 EGIDIYFEHVGG-KMLDAV--LLNMRLHGRIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g~-~~~~~~--~~~l~~~G~~v~~g~  267 (356)
                      .++|+||+++.. .+....  .+.++.|-+++....
T Consensus        70 ~~iDiVf~ATpag~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          70 ADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             GGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred             cccCEEEEcCCchhHHHhHHHHHHHHcCCEEEEccc
Confidence            269999999875 455433  445665666665543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.84  E-value=0.31  Score=37.12  Aligned_cols=88  Identities=10%  Similarity=0.098  Sum_probs=58.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcchhccccchhHHHHHHHhhcCC-CEEEecCCcccHHHHHHHhCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      +|+|.| .|.+|...+.-++..|.  +|++.+++++.+          +.++ +.+. +...+....         ....
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~----------~~a~-~~~~~~~~~~~~~~---------~~~~   61 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESI----------SKAV-DLGIIDEGTTSIAK---------VEDF   61 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHH----------HHHH-HTTSCSEEESCGGG---------GGGT
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHH----------HHHH-Hhhcchhhhhhhhh---------hhcc
Confidence            689998 89999999988888875  899999999888          8888 7775 333322110         0011


Q ss_pred             CccEEEeCCCchHH----HHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGGKML----DAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~~~~----~~~~~~l~~~G~~v~~g~  267 (356)
                      ..|+||-|+-....    ....+.+.++..++.++.
T Consensus        62 ~~dlIila~p~~~~~~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          62 SPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             CCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             ccccccccCCchhhhhhhhhhhcccccccccccccc
Confidence            46788877775433    334445555556666654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.75  E-value=0.073  Score=45.84  Aligned_cols=104  Identities=17%  Similarity=0.116  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR  231 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  231 (356)
                      .+++|++||=.+  ++.|..++.+++. |+ +|++++.+++.+      +.+.+.++ ..|....+..... +..+.+..
T Consensus       142 ~~~~g~~VLDl~--~g~G~~si~~a~~-ga~~V~~vD~s~~al------~~a~~N~~-~ngl~~~~~~~~~-d~~~~~~~  210 (324)
T d2as0a2         142 WVQPGDRVLDVF--TYTGGFAIHAAIA-GADEVIGIDKSPRAI------ETAKENAK-LNGVEDRMKFIVG-SAFEEMEK  210 (324)
T ss_dssp             GCCTTCEEEETT--CTTTHHHHHHHHT-TCSEEEEEESCHHHH------HHHHHHHH-HTTCGGGEEEEES-CHHHHHHH
T ss_pred             hcCCCCeeeccc--Ccccchhhhhhhc-CCcEEEeecCCHHHH------HHHHHHHH-HcCCCccceeeec-hhhhhhHH
Confidence            367899987776  3555566666654 66 899999998877      22223333 4455311122122 44444433


Q ss_pred             h--CCCCccEEEe---CCCc-------------hHHHHHHHhhccCCeEEEEcc
Q 018404          232 C--FPEGIDIYFE---HVGG-------------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       232 ~--~~~~~d~vid---~~g~-------------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .  .++.||+|+-   +.+.             +.+..++++|+|||.++.+..
T Consensus       211 ~~~~~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~  264 (324)
T d2as0a2         211 LQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC  264 (324)
T ss_dssp             HHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred             HHhccCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            2  2238999985   2221             145677889999999998754

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.74  E-value=0.13  Score=40.43  Aligned_cols=89  Identities=10%  Similarity=0.056  Sum_probs=63.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.++.|+| .|.+|...+++++.+|++|+..++.....          .... ..+..   .+ +  ++.+.+.+    
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~----------~~~~-~~~~~---~~-~--~l~~ll~~----  103 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASS----------SDEA-SYQAT---FH-D--SLDSLLSV----  103 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCH----------HHHH-HHTCE---EC-S--SHHHHHHH----
T ss_pred             cccceEEee-cccchHHHHHHHHhhcccccccccccccc----------chhh-ccccc---cc-C--CHHHHHhh----
Confidence            378999999 99999999999999999999998766543          2222 22221   11 1  45555655    


Q ss_pred             CccEEEeCCCc-h----H-HHHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K----M-LDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~----~-~~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|..+..- +    . -...++.|+++..+|.++.
T Consensus       104 -sD~v~l~~plt~~T~~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         104 -SQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             -CSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             -CCeEEecCCCCchHhheecHHHhhCcCCccEEEecCC
Confidence             6888776543 2    1 1577888999999988875

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.68  E-value=0.18  Score=40.26  Aligned_cols=103  Identities=13%  Similarity=0.165  Sum_probs=63.2

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALK  230 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~  230 (356)
                      ..++||++||=.|+  |.|..+..+++..+ .+|++++.++...      +++.+.++ +.+....+..+.. + .... 
T Consensus        52 l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i------~~a~~~a~-~~~ni~~i~~d~~-~-~~~~-  119 (209)
T d1nt2a_          52 LKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPF------EKLLELVR-ERNNIIPLLFDAS-K-PWKY-  119 (209)
T ss_dssp             CCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHH------HHHHHHHH-HCSSEEEECSCTT-C-GGGT-
T ss_pred             CCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHH------HHHHHHhh-ccCCceEEEeecc-C-cccc-
Confidence            56899999999984  34567788888775 4999999998876      22333334 3343222211111 1 0000 


Q ss_pred             HhCCCCccEEEeCCCc-----hHHHHHHHhhccCCeEEEEc
Q 018404          231 RCFPEGIDIYFEHVGG-----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       231 ~~~~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ......+|+++.....     ..+..+.+.|+|+|+++.+-
T Consensus       120 ~~~~~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         120 SGIVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             TTTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            0111157887764432     25788889999999998663

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.42  E-value=0.078  Score=41.22  Aligned_cols=47  Identities=15%  Similarity=0.082  Sum_probs=36.0

Q ss_pred             HHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          146 AGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       146 ~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      .+|.....--++.+|+|+| +||++.+++..+...| +|++..|+.++.
T Consensus         7 ~~l~~~~~~~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka   53 (177)
T d1nvta1           7 MALEEEIGRVKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKA   53 (177)
T ss_dssp             HHHHHHHCCCCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHH
T ss_pred             HHHHHhCCCcCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHH
Confidence            3454444335688999999 8999998887776555 999999998886

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.39  E-value=0.048  Score=46.14  Aligned_cols=96  Identities=11%  Similarity=-0.021  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhh---cCCC-----EEEecCCccc
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNK---FGFD-----DAFNYKEEND  224 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-----~vv~~~~~~~  224 (356)
                      +.+++.+||=.|  .|.|..++.|++. |++|++++.|++-+          +.+++.   .+..     ..+..-   +
T Consensus        53 ~~~~~~~vLD~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml----------~~A~~~~~~~~~~~~~~~~~~~~~---~  116 (292)
T d1xvaa_          53 RQHGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKML----------KYALKERWNRRKEPAFDKWVIEEA---N  116 (292)
T ss_dssp             HHTTCCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHH----------HHHHHHHHHTTTSHHHHTCEEEEC---C
T ss_pred             hhcCCCEEEEec--CCCcHHHHHHHHc-CCeeeeccCchHHH----------HHHHHHHHhcccccccceeeeeec---c
Confidence            345678998888  4667888888875 89999999998876          554421   2221     111111   1


Q ss_pred             HHHHHHHhCCC-CccEEEeCCCc---------------hHHHHHHHhhccCCeEEE
Q 018404          225 LDAALKRCFPE-GIDIYFEHVGG---------------KMLDAVLLNMRLHGRIAA  264 (356)
Q Consensus       225 ~~~~~~~~~~~-~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~  264 (356)
                      +...-.....+ .+|.|+.....               ..++.+.+.|+|+|.++.
T Consensus       117 ~~~~~~~~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         117 WLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             GGGHHHHSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             ccccccccCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            11111222223 79999854321               257899999999999885

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.34  E-value=0.032  Score=47.69  Aligned_cols=32  Identities=19%  Similarity=0.210  Sum_probs=29.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG  189 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~  189 (356)
                      .+|||+||+|-+|..++..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            58999999999999999888889999999975

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.32  E-value=0.076  Score=41.85  Aligned_cols=81  Identities=17%  Similarity=0.149  Sum_probs=57.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC------CEE----EecCCcccHHH
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF------DDA----FNYKEENDLDA  227 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~v----v~~~~~~~~~~  227 (356)
                      .+|.|+| +|..|.+.+.++...|.+|+...++++..          +.+. +.+.      ...    +....  ++.+
T Consensus         8 ~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~----------~~i~-~~~~n~~yl~~~~l~~~i~~t~--~l~~   73 (189)
T d1n1ea2           8 NKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEV----------RLVN-EKRENVLFLKGVQLASNITFTS--DVEK   73 (189)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHH----------HHHH-HHTBCTTTSTTCBCCTTEEEES--CHHH
T ss_pred             ceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHH----------HHHh-hcccccccccccccccccccch--hhhh
Confidence            3799999 89999999999988888999999988877          6665 3221      001    11111  4444


Q ss_pred             HHHHhCCCCccEEEeCCCchHHHHHHHhhc
Q 018404          228 ALKRCFPEGIDIYFEHVGGKMLDAVLLNMR  257 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~~~~~~~~~~l~  257 (356)
                      .+.     +.|++|-++....+...++.++
T Consensus        74 a~~-----~ad~iiiavPs~~~~~~~~~~~   98 (189)
T d1n1ea2          74 AYN-----GAEIILFVIPTQFLRGFFEKSG   98 (189)
T ss_dssp             HHT-----TCSCEEECSCHHHHHHHHHHHC
T ss_pred             ccC-----CCCEEEEcCcHHHHHHHHHHHH
Confidence            444     4799999999888877776654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.19  E-value=0.17  Score=41.04  Aligned_cols=71  Identities=17%  Similarity=0.137  Sum_probs=52.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      -.|.+|+|.| .|.||..+++++..+|++|++++.+....          +.+.+..|... ++. +         ++..
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~----------~~~~~~~g~~~-~~~-~---------~~~~   94 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAV----------SAAVAEEGADA-VAP-N---------AIYG   94 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH----------HHHHHHHCCEE-CCG-G---------GTTT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHH----------HHHHHhcCCcc-cCC-c---------cccc
Confidence            4688999999 99999999999999999999999888777          66664666532 211 1         1112


Q ss_pred             CCccEEEeCCCch
Q 018404          235 EGIDIYFEHVGGK  247 (356)
Q Consensus       235 ~~~d~vid~~g~~  247 (356)
                      -.+|+++=|.-+.
T Consensus        95 ~~cDIl~PcA~~~  107 (230)
T d1leha1          95 VTCDIFAPCALGA  107 (230)
T ss_dssp             CCCSEEEECSCSC
T ss_pred             ccccEeccccccc
Confidence            2678888777663

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.11  E-value=0.14  Score=40.16  Aligned_cols=89  Identities=11%  Similarity=-0.007  Sum_probs=62.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .+.+|.|.| .|.+|...+++++.+|++|+..++.....          .... ..+...   . .  ++.+.+++    
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~----------~~~~-~~~~~~---~-~--~l~~~l~~----  100 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPE----------SVEK-ELNLTW---H-A--TREDMYPV----  100 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCH----------HHHH-HHTCEE---C-S--SHHHHGGG----
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeeccccc----------cccc-cccccc---c-C--CHHHHHHh----
Confidence            578999999 99999999999999999999999875553          3333 444321   1 1  33444433    


Q ss_pred             CccEEEeCCCc-h-----HHHHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K-----MLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~-----~~~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|.-+..- +     .-...+..|+++..+|.++.
T Consensus       101 -sD~v~~~~plt~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         101 -CDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             -CSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             -ccchhhcccccccchhhhHHHHHHhCCCCCEEEecCc
Confidence             6788765553 2     12577788888888888765

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.07  E-value=0.15  Score=39.64  Aligned_cols=94  Identities=14%  Similarity=0.103  Sum_probs=57.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCc-----------ccHH
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEE-----------NDLD  226 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~-----------~~~~  226 (356)
                      +|.|+| .|-+|+..++.+... ..+++++.......        ....+. ..+..........           -.+.
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~g~~~   72 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNY--------EAFIAH-RRGIRIYVPQQSIKKFEESGIPVAGTVE   72 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSH--------HHHHHH-HTTCCEECCGGGHHHHHTTTCCCCCCHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcH--------HHHHhc-ccCcceeccCccceeccccceecCCchh
Confidence            688999 999999999998877 56888887543221        003333 3333221111110           0111


Q ss_pred             HHHHHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEcc
Q 018404          227 AALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ..+.     ++|+|+||+|. .....+-.++..+-+++..+.
T Consensus        73 ~~~~-----~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          73 DLIK-----TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             HHHH-----HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             hhhh-----cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence            1111     48999999998 566777777877767776654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.95  E-value=0.16  Score=36.46  Aligned_cols=42  Identities=17%  Similarity=0.087  Sum_probs=36.6

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +.....++.+|+|.| +|.+|+-+++.++.+|.+|..+.+.+.
T Consensus        15 ~~l~~~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          15 EELDYEPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             HHCCSCCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             HHHhhCCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            335667889999999 899999999999999999999998754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.85  E-value=0.19  Score=43.34  Aligned_cols=38  Identities=21%  Similarity=0.316  Sum_probs=32.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .+-+|||+||+|-+|..++..+...|.+|+++++....
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~   51 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNE   51 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCcc
Confidence            35589999999999999999999999999999865443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.77  E-value=0.061  Score=42.89  Aligned_cols=33  Identities=15%  Similarity=0.148  Sum_probs=27.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGS  190 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~  190 (356)
                      .+|||+||+|-+|..++..+...|.  +|++..++
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~   37 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK   37 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCC
Confidence            6899999999999999998888876  67766654

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=92.71  E-value=0.24  Score=41.05  Aligned_cols=95  Identities=9%  Similarity=0.039  Sum_probs=65.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHh
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRC  232 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~  232 (356)
                      ..++.+||=.|  -|.|..+..+++.. +.++++++.+++.+          +.+++...-...+..+-. +    + .+
T Consensus        82 ~~~~~~iLDiG--cG~G~~~~~l~~~~~~~~~~giD~s~~~~----------~~a~~~~~~~~~~~~d~~-~----l-~~  143 (268)
T d1p91a_          82 DDKATAVLDIG--CGEGYYTHAFADALPEITTFGLDVSKVAI----------KAAAKRYPQVTFCVASSH-R----L-PF  143 (268)
T ss_dssp             CTTCCEEEEET--CTTSTTHHHHHHTCTTSEEEEEESCHHHH----------HHHHHHCTTSEEEECCTT-S----C-SB
T ss_pred             CCCCCEEEEeC--CCCcHHHHHHHHHCCCCEEEEecchHhhh----------hhhhcccccccceeeehh-h----c-cC
Confidence            45677888887  45677778888876 77999999998887          777633322222222111 1    0 11


Q ss_pred             CCCCccEEEeCCCchHHHHHHHhhccCCeEEEEc
Q 018404          233 FPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ..+.+|+|+....-..+.++.+.|+|+|.++...
T Consensus       144 ~~~sfD~v~~~~~~~~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         144 SDTSMDAIIRIYAPCKAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             CTTCEEEEEEESCCCCHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEeecCCHHHHHHHHHHhCCCcEEEEEe
Confidence            1237999997666678899999999999998764

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.70  E-value=0.18  Score=37.80  Aligned_cols=90  Identities=18%  Similarity=0.080  Sum_probs=52.4

Q ss_pred             EEEEecCCchHHHHHHHH-HHHc---CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCC
Q 018404          159 YIYVSAASGAVGQLVGQF-AKLM---GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~l-a~~~---g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      +|-|.||+|-+|+-.+++ +.+.   -.+++...++...-          ...........+.+..+   .. .+.    
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g----------~~~~~~~~~~~~~~~~~---~~-~~~----   64 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ----------AAPSFGGTTGTLQDAFD---LE-ALK----   64 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS----------BCCGGGTCCCBCEETTC---HH-HHH----
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccc----------ccccccCCceeeecccc---hh-hhh----
Confidence            689999999999999974 5443   34777777664432          11110111112222211   11 122    


Q ss_pred             CCccEEEeCCCchHHHHHHHhhccCC---eEEEEcc
Q 018404          235 EGIDIYFEHVGGKMLDAVLLNMRLHG---RIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g~~~~~~~~~~l~~~G---~~v~~g~  267 (356)
                       ++|++|-|.+.+........+...|   .++..+.
T Consensus        65 -~~DivF~a~~~~~s~~~~~~~~~~g~~~~VID~Ss   99 (146)
T d1t4ba1          65 -ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAAS   99 (146)
T ss_dssp             -TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             -cCcEEEEecCchHHHHhhHHHHhcCCCeecccCCc
Confidence             5899999999976666666665555   3566554

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=92.66  E-value=0.92  Score=33.63  Aligned_cols=98  Identities=9%  Similarity=-0.093  Sum_probs=61.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG  236 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~  236 (356)
                      .++++|.| .|.+|..+++.+...|.+|+++...+++..      +..+.+. ..|.. ++..+.  .-.+.+++..-..
T Consensus         3 knHiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~------~~~~~~~-~~~~~-vi~Gd~--~d~~~L~~a~i~~   71 (153)
T d1id1a_           3 KDHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDI------KQLEQRL-GDNAD-VIPGDS--NDSSVLKKAGIDR   71 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHH------HHHHHHH-CTTCE-EEESCT--TSHHHHHHHTTTT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHH------HHHHHhh-cCCcE-EEEccC--cchHHHHHhcccc
Confidence            46799999 799999999999999999999998776430      0002222 23443 343322  2234555553347


Q ss_pred             ccEEEeCCCchHH----HHHHHhhccCCeEEEE
Q 018404          237 IDIYFEHVGGKML----DAVLLNMRLHGRIAAC  265 (356)
Q Consensus       237 ~d~vid~~g~~~~----~~~~~~l~~~G~~v~~  265 (356)
                      +|.++-+.+.+..    ....+.+.+.-+++..
T Consensus        72 a~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          72 CRAILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             CSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             CCEEEEccccHHHHHHHHHHHHHhCCCCceEEE
Confidence            8999999887422    2334456666666654

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.63  E-value=0.14  Score=41.11  Aligned_cols=96  Identities=9%  Similarity=0.104  Sum_probs=61.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHH---cCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKL---MGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLDA  227 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~---~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~~  227 (356)
                      ++++.+||=+|  -|.|..+..+++.   .+++|++++.|++-+          +.+++   +.+....+..... +.  
T Consensus        37 ~~~~~~vLDlG--CGtG~~~~~l~~~~~~~~~~v~giD~S~~ml----------~~A~~~~~~~~~~~~~~~~~~-d~--  101 (225)
T d1im8a_          37 VTADSNVYDLG--CSRGAATLSARRNINQPNVKIIGIDNSQPMV----------ERCRQHIAAYHSEIPVEILCN-DI--  101 (225)
T ss_dssp             CCTTCEEEEES--CTTCHHHHHHHHTCCCSSCEEEEECSCHHHH----------HHHHHHHHTSCCSSCEEEECS-CT--
T ss_pred             cCCCCEEEEec--cchhhHHHHHHHhhcCCCCceEEeCCCHHHH----------HHHHHHhHhhcccchhhhccc-hh--
Confidence            68899999998  4567777777775   478999999998877          55552   2333211211111 11  


Q ss_pred             HHHHhCCCCccEEEeCCC-------c--hHHHHHHHhhccCCeEEEEc
Q 018404          228 ALKRCFPEGIDIYFEHVG-------G--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g-------~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                        .+.....+|+++-+..       .  ..++.+.+.|+|+|.++...
T Consensus       102 --~~~~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         102 --RHVEIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             --TTCCCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --hccccccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence              1221225676665433       1  36889999999999999764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=92.62  E-value=0.28  Score=40.51  Aligned_cols=36  Identities=17%  Similarity=0.148  Sum_probs=32.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .+|||+||+|-+|..++..+...|.+|++++++...
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~   39 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTA   39 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCcc
Confidence            579999999999999999998999999999987655

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.62  E-value=0.16  Score=43.63  Aligned_cols=32  Identities=16%  Similarity=0.113  Sum_probs=28.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG  189 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~  189 (356)
                      +.|||+||+|-+|..++..+...|.+|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence            47999999999999999988889999999864

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.60  E-value=0.08  Score=45.52  Aligned_cols=36  Identities=11%  Similarity=0.121  Sum_probs=30.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchh
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKV  194 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~  194 (356)
                      +|||+||+|-+|..+++.+...| .+|++++......
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~   38 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI   38 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcch
Confidence            59999999999999998777777 6999998765554

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.58  E-value=0.16  Score=41.67  Aligned_cols=43  Identities=16%  Similarity=0.268  Sum_probs=35.3

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      ++.....--.|.+|+|.| .|.||..+++++..+|++|++++.+
T Consensus        21 ~~~~~~~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          21 MAKKLWGGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             HHHHHHSCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             HHHHcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            343433334689999999 9999999999999999999988865

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.56  E-value=0.2  Score=38.28  Aligned_cols=94  Identities=14%  Similarity=0.061  Sum_probs=61.1

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEE
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDA  216 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v  216 (356)
                      +|++..-.+..|.+..---.|.+|+|.|.+.-+|.-+..++...|++|+...+....+                      
T Consensus        17 ~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l----------------------   74 (166)
T d1b0aa1          17 RPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL----------------------   74 (166)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH----------------------
T ss_pred             CCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchh----------------------
Confidence            4444444444554443345699999999999999999999999999987665332221                      


Q ss_pred             EecCCcccHHHHHHHhCCCCccEEEeCCCch-HHHHHHHhhccCCeEEEEccc
Q 018404          217 FNYKEENDLDAALKRCFPEGIDIYFEHVGGK-MLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       217 v~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~  268 (356)
                               .+.+++     .|+++-++|.. .+.  -+.++++..++.+|..
T Consensus        75 ---------~~~~~~-----ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          75 ---------RHHVEN-----ADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             ---------HHHHHH-----CSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             ---------HHHHhh-----hhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence                     112222     67777777763 222  2366777788888763

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.45  E-value=0.56  Score=36.51  Aligned_cols=98  Identities=14%  Similarity=0.082  Sum_probs=61.8

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCC----EEEecC
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFD----DAFNYK  220 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~----~vv~~~  220 (356)
                      |.......++++||=.|  .|.|..++.+++ .+.+|++++.++...          +.+++   ..+..    .++.. 
T Consensus        44 Li~~l~~~~~~~VLDiG--cG~G~~~~~la~-~~~~v~~iD~s~~~i----------~~a~~n~~~~~l~~~~i~~~~~-  109 (194)
T d1dusa_          44 LVENVVVDKDDDILDLG--CGYGVIGIALAD-EVKSTTMADINRRAI----------KLAKENIKLNNLDNYDIRVVHS-  109 (194)
T ss_dssp             HHHHCCCCTTCEEEEET--CTTSHHHHHHGG-GSSEEEEEESCHHHH----------HHHHHHHHHTTCTTSCEEEEEC-
T ss_pred             HHHhCCcCCCCeEEEEe--ecCChhHHHHHh-hccccceeeeccccc----------hhHHHHHHHhCCccceEEEEEc-
Confidence            33456788899999888  455667777765 567999999988776          44432   33432    12221 


Q ss_pred             CcccHHHHHHHhCCCCccEEEeC----CCch----HHHHHHHhhccCCeEEEE
Q 018404          221 EENDLDAALKRCFPEGIDIYFEH----VGGK----MLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       221 ~~~~~~~~~~~~~~~~~d~vid~----~g~~----~~~~~~~~l~~~G~~v~~  265 (356)
                         ++.   ....++.+|+|+-.    .+.+    .+..+.+.|+|+|+++.+
T Consensus       110 ---d~~---~~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         110 ---DLY---ENVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             ---STT---TTCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ---chh---hhhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence               111   11222379999862    2222    467888999999998654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.39  E-value=0.13  Score=43.75  Aligned_cols=100  Identities=20%  Similarity=0.153  Sum_probs=55.7

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCc
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEE  222 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~  222 (356)
                      ++.+...+.+|++||-+| +| .|..++.+|+ .|+ +|++++.++.-.       .+.+..+ +.+..   .++..+-.
T Consensus        26 ai~~~~~~~~~~~VLDiG-cG-~G~lsl~aa~-~Ga~~V~aid~s~~~~-------~a~~~~~-~~~~~~~i~~~~~~~~   94 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVG-CG-TGILSMFAAK-AGAKKVLGVDQSEILY-------QAMDIIR-LNKLEDTITLIKGKIE   94 (311)
T ss_dssp             HHHHCGGGTTTCEEEEET-CT-TSHHHHHHHH-TTCSEEEEEESSTHHH-------HHHHHHH-HTTCTTTEEEEESCTT
T ss_pred             HHHhccccCCcCEEEEEC-CC-CCHHHHHHHH-cCCCEEEEEeCHHHHH-------HHHHHHH-HhCCCccceEEEeeHH
Confidence            344444567899999998 44 6667776666 476 899999886532       1223333 44432   23322211


Q ss_pred             ccHHHHHHHhCCCCccEEEe-CCC----c-h---H-HHHHHHhhccCCeEE
Q 018404          223 NDLDAALKRCFPEGIDIYFE-HVG----G-K---M-LDAVLLNMRLHGRIA  263 (356)
Q Consensus       223 ~~~~~~~~~~~~~~~d~vid-~~g----~-~---~-~~~~~~~l~~~G~~v  263 (356)
                       +    +. ...+.+|+|+. ..+    + .   . +...-+.|+|+|+++
T Consensus        95 -~----l~-~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1          95 -E----VH-LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             -T----SC-CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             -H----hc-CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence             1    10 11137999975 122    1 1   2 233446899999886

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.30  E-value=0.085  Score=44.81  Aligned_cols=35  Identities=20%  Similarity=0.264  Sum_probs=31.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      .+|||+||+|-+|..++..+...|.+|+++++...
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~   35 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS   35 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCC
Confidence            48999999999999999988888999999997644

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.20  E-value=0.21  Score=36.09  Aligned_cols=38  Identities=18%  Similarity=0.139  Sum_probs=33.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      +..++++|.| +|-+|+-+++..+.+|++|+++.+++.-
T Consensus        23 ~~p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          23 EIPKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             SCCSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             ccCCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            3457999999 8999999999999999999999987654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.13  E-value=0.25  Score=35.38  Aligned_cols=47  Identities=13%  Similarity=0.158  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          142 MTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       142 ~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      .++..+| +. + +..++++|.| +|.+|+-+++.++.+|++|..+.+++.
T Consensus        10 ~~s~~~l-~l-~-~~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          10 VDSTGAL-DF-Q-NVPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             EEHHHHT-SC-S-SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             EchhHhh-Cc-c-cCCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence            4566665 22 2 3347899999 899999999999999999999997754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.02  E-value=0.21  Score=36.00  Aligned_cols=35  Identities=14%  Similarity=0.178  Sum_probs=31.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      .++++|.| +|.+|+-+++.+..+|++|+.+.+++.
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhhCcceeEEEeccc
Confidence            46999999 899999999999999999999997654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.98  E-value=0.17  Score=36.23  Aligned_cols=40  Identities=18%  Similarity=0.049  Sum_probs=34.5

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      ..++..++|+|.| +|.+|+-++..++.+|.+|+.+.+++.
T Consensus        17 ~~l~~p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          17 FNIKESKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             TTCCCCSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             hccCCCCEEEEEC-CchHHHHHHHHHHhccccceeeehhcc
Confidence            3455678999999 899999999999999999999997754

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=91.95  E-value=0.27  Score=40.37  Aligned_cols=99  Identities=8%  Similarity=0.006  Sum_probs=66.6

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKR  231 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~  231 (356)
                      ....++.+||=.|  .|.|..+..++.....+|++++.+++-+          +.+++.+.....+++... +    +.+
T Consensus        89 l~~~~~~~vLD~G--cG~G~~t~~ll~~~~~~v~~vD~s~~~l----------~~a~~~~~~~~~~~~~~~-d----~~~  151 (254)
T d1xtpa_          89 LPGHGTSRALDCG--AGIGRITKNLLTKLYATTDLLEPVKHML----------EEAKRELAGMPVGKFILA-S----MET  151 (254)
T ss_dssp             STTCCCSEEEEET--CTTTHHHHHTHHHHCSEEEEEESCHHHH----------HHHHHHTTTSSEEEEEES-C----GGG
T ss_pred             CCCCCCCeEEEec--ccCChhhHHHHhhcCceEEEEcCCHHHH----------HhhhccccccccceeEEc-c----ccc
Confidence            3445677888888  5678888998888778999999998887          777745543223332221 2    222


Q ss_pred             hC--CCCccEEEeCCC-----c----hHHHHHHHhhccCCeEEEEcc
Q 018404          232 CF--PEGIDIYFEHVG-----G----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       232 ~~--~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      +.  .+.+|+|+..--     .    ..++.+.+.|+++|.++....
T Consensus       152 ~~~~~~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         152 ATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             CCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccCCCccceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence            22  237999976332     1    246788899999999987543

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.94  E-value=0.079  Score=35.09  Aligned_cols=36  Identities=19%  Similarity=0.260  Sum_probs=32.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      .+|.|+| +|-+|.+.++-++.+|.++++.+..++..
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            4799999 89999999999999999999999876654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.80  E-value=0.55  Score=35.43  Aligned_cols=43  Identities=16%  Similarity=0.018  Sum_probs=36.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF  213 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~  213 (356)
                      +|-+.| .|-+|...+.-+...|.+|++.++++++.          +.+. ..+.
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~----------~~~~-~~~~   45 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAV----------DGLV-AAGA   45 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHH----------HHHH-HTTC
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhh----------hhhh-hhhc
Confidence            688888 99999988887777899999999998887          7776 6664

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.76  E-value=0.39  Score=37.46  Aligned_cols=85  Identities=18%  Similarity=0.138  Sum_probs=61.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .+.+|.|+| .|.+|...+++++.+|++|+..++.....               ....   ....   ++.+.+.+    
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~---------------~~~~---~~~~---~l~ell~~----   96 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLP---------------LGNA---TQVQ---HLSDLLNM----   96 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCC---------------CTTC---EECS---CHHHHHHH----
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccch---------------hhhh---hhhh---hHHHHHhh----
Confidence            467999999 99999999999999999999998764432               1111   1111   45555554    


Q ss_pred             CccEEEeCCCc-h-----HHHHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K-----MLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~-----~~~~~~~~l~~~G~~v~~g~  267 (356)
                       .|++.-+..- +     .-.+.++.|+++..+|.++.
T Consensus        97 -sDii~i~~plt~~T~~li~~~~l~~mk~~a~lIN~aR  133 (188)
T d1sc6a1          97 -SDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASR  133 (188)
T ss_dssp             -CSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             -ccceeecccCCcchhhhccHHHHhhCCCCCEEEEcCc
Confidence             6888876653 2     12677889999999988875

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.72  E-value=0.24  Score=42.30  Aligned_cols=100  Identities=16%  Similarity=0.072  Sum_probs=59.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE--EEecCCcccHHHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD--AFNYKEENDLDAALKR  231 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~~  231 (356)
                      ..+|++||=.+  .+.|..++.+|+ .+++|++++.++..+      +.+.+.++ ..|.+.  .+..    +..+.++.
T Consensus       143 ~~~g~rVLDl~--~gtG~~s~~~a~-g~~~V~~vD~s~~al------~~a~~n~~-~ngl~~~~~i~~----d~~~~~~~  208 (318)
T d1wxxa2         143 RFRGERALDVF--SYAGGFALHLAL-GFREVVAVDSSAEAL------RRAEENAR-LNGLGNVRVLEA----NAFDLLRR  208 (318)
T ss_dssp             GCCEEEEEEET--CTTTHHHHHHHH-HEEEEEEEESCHHHH------HHHHHHHH-HTTCTTEEEEES----CHHHHHHH
T ss_pred             HhCCCeeeccC--CCCcHHHHHHHh-cCCcEEeecchHHHH------HHHHHHHH-HcCCCCcceeec----cHHHHhhh
Confidence            34688887665  233445566664 456999999998877      23333333 456542  2222    33333333


Q ss_pred             hC--CCCccEEEe---CCC--c-----------hHHHHHHHhhccCCeEEEEcc
Q 018404          232 CF--PEGIDIYFE---HVG--G-----------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       232 ~~--~~~~d~vid---~~g--~-----------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ..  ++.||+|+-   |.+  .           +.+..+++.|+|||.++.+..
T Consensus       209 ~~~~~~~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         209 LEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             HHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             hHhhhcCCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            22  237998884   221  1           144677889999999988754

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.68  E-value=0.18  Score=41.06  Aligned_cols=89  Identities=16%  Similarity=0.053  Sum_probs=56.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCC-EEEecCCcccHHHHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFD-DAFNYKEENDLDAALK  230 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~-~vv~~~~~~~~~~~~~  230 (356)
                      .++.+||=.| +| .|..+..+++ .|.+|++++.|++-+          +.+++   ..+.. .++..    +    +.
T Consensus        36 ~~~~~vLDiG-CG-~G~~~~~l~~-~g~~v~GvD~S~~ml----------~~A~~~~~~~~~~v~~~~~----d----~~   94 (246)
T d1y8ca_          36 LVFDDYLDLA-CG-TGNLTENLCP-KFKNTWAVDLSQEML----------SEAENKFRSQGLKPRLACQ----D----IS   94 (246)
T ss_dssp             CCTTEEEEET-CT-TSTTHHHHGG-GSSEEEEECSCHHHH----------HHHHHHHHHTTCCCEEECC----C----GG
T ss_pred             CCCCeEEEEe-Cc-CCHHHHHHHH-hCCccEeeccchhhh----------hhccccccccCccceeecc----c----hh
Confidence            3457899888 44 5677777765 588999999998876          55542   23432 22221    2    12


Q ss_pred             HhC-CCCccEEEeCCCc-----------hHHHHHHHhhccCCeEEE
Q 018404          231 RCF-PEGIDIYFEHVGG-----------KMLDAVLLNMRLHGRIAA  264 (356)
Q Consensus       231 ~~~-~~~~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~  264 (356)
                      ++. .+.+|+|+...+.           ..++.+.+.|+|+|.++.
T Consensus        95 ~~~~~~~fD~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_          95 NLNINRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             GCCCSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             hhcccccccccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            222 2379999854331           156788889999999874

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=91.65  E-value=0.087  Score=45.50  Aligned_cols=39  Identities=23%  Similarity=0.209  Sum_probs=34.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      +..+|+|+||+|.+|..++..+...|.+|++++|+.+..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~   40 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL   40 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchh
Confidence            457899999999999999999999999999999976653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.64  E-value=0.31  Score=37.34  Aligned_cols=55  Identities=15%  Similarity=0.048  Sum_probs=40.8

Q ss_pred             cCcchHHHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          137 LGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       137 l~~~~~tA~~~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      +|++..-.+..|.+..---.|.+|+|.|.+.-+|.-+..++...|+.|+...+..
T Consensus        19 ~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          19 IPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            4545444444554433334789999999999999999999999999999776543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.61  E-value=0.71  Score=35.48  Aligned_cols=81  Identities=12%  Similarity=0.055  Sum_probs=54.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch--hccccchhHHHHHHHhhcCC---------CEEEecCCcccHHH
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK--VWLIPMQSQLVELLKNKFGF---------DDAFNYKEENDLDA  227 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~--~~~~~~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~  227 (356)
                      .|.|+| +|.+|.+.+..+...|.+|+...+..+.  .          +.+. +-..         ...+...+  ++.+
T Consensus         2 kI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~----------~~i~-~~~~~~~~~~~~~~~~i~~~~--~~~~   67 (180)
T d1txga2           2 IVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEIL----------KSIS-AGREHPRLGVKLNGVEIFWPE--QLEK   67 (180)
T ss_dssp             EEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHH----------HHHH-TTCCBTTTTBCCCSEEEECGG--GHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHH----------HHHh-hhhhhhhhcchhccccccccc--cHHH
Confidence            578999 8999999999988889999999875443  2          3443 2111         11111111  4444


Q ss_pred             HHHHhCCCCccEEEeCCCchHHHHHHHhhcc
Q 018404          228 ALKRCFPEGIDIYFEHVGGKMLDAVLLNMRL  258 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~  258 (356)
                      .+.     ..|+||.++....+...++.+.+
T Consensus        68 ~~~-----~ad~Ii~avps~~~~~~~~~l~~   93 (180)
T d1txga2          68 CLE-----NAEVVLLGVSTDGVLPVMSRILP   93 (180)
T ss_dssp             HHT-----TCSEEEECSCGGGHHHHHHHHTT
T ss_pred             HHh-----ccchhhcccchhhhHHHHHhhcc
Confidence            443     48999999999887777776655

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=91.59  E-value=2.3  Score=35.05  Aligned_cols=105  Identities=15%  Similarity=0.153  Sum_probs=65.0

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC---cchhccccchhHHHHHHHhhcCCCEEEecCCc-----
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS---REKVWLIPMQSQLVELLKNKFGFDDAFNYKEE-----  222 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~-----  222 (356)
                      .+.+.++.+|+... +|..|++++..++.+|.+++++...   +.+.          +.++ .+|++.++...+.     
T Consensus        54 ~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~----------~~~~-~~GA~v~~v~~~~~~~~a  121 (292)
T d2bhsa1          54 RGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERR----------AAMR-AYGAELILVTKEQGMEGA  121 (292)
T ss_dssp             TTSCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEEEESCCCHHHH----------HHHH-HTTCEEEEECTTTHHHHH
T ss_pred             hCCcCCCceeeeec-ccchhHHHHHHHHhcCcceEeeeccCchhhhh----------HHHH-HhCCCcceeecccchHHH
Confidence            35566676665555 8999999999999999977666653   3344          6666 7887533321110     


Q ss_pred             ---------------------cc--------HHHHHHHhCCCCccEEEeCCCc-hHHH---HHHHhhccCCeEEEEcc
Q 018404          223 ---------------------ND--------LDAALKRCFPEGIDIYFEHVGG-KMLD---AVLLNMRLHGRIAACGM  267 (356)
Q Consensus       223 ---------------------~~--------~~~~~~~~~~~~~d~vid~~g~-~~~~---~~~~~l~~~G~~v~~g~  267 (356)
                                           +.        ...++.+..++.+|.++-++|+ ..+.   ..++.+.+..+++.+..
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         122 RDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             HHHHHHHHHHTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             HHHHhhccccccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                                 00        1122323334468999998887 4443   45555667788776654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.55  E-value=0.037  Score=40.32  Aligned_cols=38  Identities=11%  Similarity=-0.046  Sum_probs=32.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      +.+.+++|.| +|.+|+-+++.++.+|.+|+.+.+++.-
T Consensus        30 ~~~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~l   67 (122)
T d1xhca2          30 ENSGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAMF   67 (122)
T ss_dssp             HHHSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred             hcCCcEEEEC-CcHHHHHHHHHhhcccceEEEEeccccc
Confidence            4457999999 8999999999999999999999877543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.38  E-value=0.16  Score=39.51  Aligned_cols=38  Identities=18%  Similarity=0.108  Sum_probs=33.7

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      ...+.+|+|.| +|+.|+.|+..+..+|.+|+.....+.
T Consensus        40 ~~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCc
Confidence            35568999999 899999999999999999999997653

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.37  E-value=0.17  Score=41.06  Aligned_cols=101  Identities=12%  Similarity=0.032  Sum_probs=62.8

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhh---cCCCEEEecCCcccHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNK---FGFDDAFNYKEENDLD  226 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~  226 (356)
                      ...+++|++||=+|+  |.|..+..+++.. +.+|++++.++...          +.+++.   .+....+..... .. 
T Consensus        69 ~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i----------~~a~~~a~~~~ni~~i~~d~~-~~-  134 (230)
T d1g8sa_          69 VMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIM----------RELLDACAERENIIPILGDAN-KP-  134 (230)
T ss_dssp             CCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHH----------HHHHHHTTTCTTEEEEECCTT-CG-
T ss_pred             hCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHH----------HHHHHHHhhhcccceEEEeec-cC-
Confidence            356899999999995  4467778888875 45999999998877          555522   222222222211 11 


Q ss_pred             HHHHHhCCCCccEEEeCCCc-----hHHHHHHHhhccCCeEEEEc
Q 018404          227 AALKRCFPEGIDIYFEHVGG-----KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ...... ...+|+++.....     ..+..+.+.|+|+|+++.+-
T Consensus       135 ~~~~~~-~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         135 QEYANI-VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             GGGTTT-CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccc-cceeEEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            011111 1146667665542     25788889999999988653

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=91.30  E-value=1.3  Score=33.68  Aligned_cols=98  Identities=14%  Similarity=0.129  Sum_probs=59.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcc-cHHH-------HH
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEEN-DLDA-------AL  229 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~-------~~  229 (356)
                      +|.|+| -|-+|....+++...+ .+++++.......        ....+. .++.+......+.. .+.+       .+
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~--------~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~g~~   72 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDF--------EARMAL-KKGYDLYVAIPERVKLFEKAGIEVAGTV   72 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSH--------HHHHHH-HTTCCEEESSGGGHHHHHHTTCCCCEEH
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHH--------HHHHHH-hcCCceEecccccceeecccCcccCCCh
Confidence            689999 9999999998887664 5777776432211        003444 55554322211110 0000       00


Q ss_pred             HHhCCCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEcc
Q 018404          230 KRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       230 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+.. .++|+|+||+|. .....+-..+..+-++|..+.
T Consensus        73 ~~~~-~~vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~  110 (171)
T d1cf2o1          73 DDML-DEADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGG  110 (171)
T ss_dssp             HHHH-HTCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             hHhh-cCCCEEEEccCCCCCHHHHHHHHHcCCCEEEECC
Confidence            1110 169999999998 666777888888888887765

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.28  E-value=0.22  Score=40.97  Aligned_cols=43  Identities=14%  Similarity=0.074  Sum_probs=34.8

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      ++.+...--+|.+|+|.| .|.||..+++++..+|++|++++.+
T Consensus        26 ~~~~~~~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          26 VMKHENDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             HHHHTTCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             HHHhCCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence            344333334688999999 9999999999999999999988754

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=91.20  E-value=1.1  Score=35.24  Aligned_cols=98  Identities=14%  Similarity=0.063  Sum_probs=62.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      +..||=+|  -|.|..++.+|+.. +.++++++.+...+      ..+.+.++ +.+.+.+--...  +.......+-.+
T Consensus        30 ~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i------~~a~~~~~-~~~l~Nv~~~~~--Da~~l~~~~~~~   98 (204)
T d2fcaa1          30 NPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVI------VTAVQKVK-DSEAQNVKLLNI--DADTLTDVFEPG   98 (204)
T ss_dssp             CCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHH------HHHHHHHH-HSCCSSEEEECC--CGGGHHHHCCTT
T ss_pred             CceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHH------HHHHHHHH-HHhccCchhccc--chhhhhcccCch
Confidence            34566666  57789999999987 78999999988876      23334445 567653321112  222222222233


Q ss_pred             CccEEEeCCCc---------------hHHHHHHHhhccCCeEEEE
Q 018404          236 GIDIYFEHVGG---------------KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       236 ~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~~  265 (356)
                      .+|.|+-..-.               ..+..+.+.|+|+|.+...
T Consensus        99 ~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1          99 EVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             SCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             hhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            67777654321               3678889999999998765

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.16  E-value=0.86  Score=31.11  Aligned_cols=51  Identities=18%  Similarity=0.133  Sum_probs=39.8

Q ss_pred             CCCCCCEEEEecCCchHHHHH-HHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC
Q 018404          153 APKKGEYIYVSAASGAVGQLV-GQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD  214 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~a-i~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  214 (356)
                      .++...++.+.| -||+|..+ +++++..|++|.+.+......         .+.++ +.|..
T Consensus         4 ~~~~~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~---------~~~L~-~~Gi~   55 (96)
T d1p3da1           4 EMRRVQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADGVV---------TQRLA-QAGAK   55 (96)
T ss_dssp             CCTTCCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHH---------HHHHH-HTTCE
T ss_pred             cchhCCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChh---------hhHHH-HCCCe
Confidence            356678999999 89999777 799999999999999875432         15566 77875

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.15  E-value=0.21  Score=35.58  Aligned_cols=36  Identities=22%  Similarity=0.213  Sum_probs=32.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      ..++++|.| +|.+|+-+++.+..+|.+|+.+.+.+.
T Consensus        21 ~p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            347899999 899999999999999999999997765

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=91.08  E-value=0.14  Score=41.97  Aligned_cols=96  Identities=10%  Similarity=0.076  Sum_probs=58.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHHHHHH
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLDAALK  230 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~~~~~  230 (356)
                      ++++++||=.| +|. |..+..+++.-..+|++++.+++.+          +.+++   ..+...-+..... +.   ..
T Consensus        22 ~~~~~~VLDlG-CG~-G~~~~~~~~~~~~~v~GiD~S~~~l----------~~A~~r~~~~~~~~~v~f~~~-D~---~~   85 (252)
T d1ri5a_          22 TKRGDSVLDLG-CGK-GGDLLKYERAGIGEYYGVDIAEVSI----------NDARVRARNMKRRFKVFFRAQ-DS---YG   85 (252)
T ss_dssp             CCTTCEEEEET-CTT-TTTHHHHHHHTCSEEEEEESCHHHH----------HHHHHHHHTSCCSSEEEEEES-CT---TT
T ss_pred             CCCcCEEEEec-ccC-cHHHHHHHHcCCCeEEEecCCHHHH----------HHHHHHHHhcCCCcceEEEEc-ch---hh
Confidence            57899999998 443 6667778776556999999998887          55542   3343211111110 10   01


Q ss_pred             H-h-CCCCccEEEeCCCc-----------hHHHHHHHhhccCCeEEEE
Q 018404          231 R-C-FPEGIDIYFEHVGG-----------KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       231 ~-~-~~~~~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~  265 (356)
                      . . ..+.+|+|+....-           ..+..+.+.|+|+|.++..
T Consensus        86 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          86 RHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             SCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             hcccccccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            1 1 12379999764332           1456677899999998754

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=90.74  E-value=0.48  Score=38.70  Aligned_cols=103  Identities=16%  Similarity=0.109  Sum_probs=63.8

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHH
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA  228 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  228 (356)
                      ....+....+||=+|  +|.|..++.+++.. +.++++++.+ +..      +.+.+.+. +.+....+..... ++.  
T Consensus        74 ~~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~~-~~~------~~a~~~~~-~~~~~~rv~~~~~-D~~--  140 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEMA-GTV------DTARSYLK-DEGLSDRVDVVEG-DFF--  140 (253)
T ss_dssp             HHSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEECT-THH------HHHHHHHH-HTTCTTTEEEEEC-CTT--
T ss_pred             hhcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccCH-HHH------HHHHHHHH-Hhhcccchhhccc-cch--
Confidence            445677788999888  56788999999988 6799888864 333      12223344 4454211221111 211  


Q ss_pred             HHHhCCCCccEEEeCCC-----c----hHHHHHHHhhccCCeEEEEcc
Q 018404          229 LKRCFPEGIDIYFEHVG-----G----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                        +...+++|+|+-..-     .    ..++++.+.|+|+|+++.+..
T Consensus       141 --~~~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         141 --EPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             --SCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             --hhcccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence              111236899875322     1    247889999999999987754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.56  E-value=0.17  Score=41.27  Aligned_cols=35  Identities=17%  Similarity=0.057  Sum_probs=31.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      .++|+|.| +|..|++++..++..|.+|+++.++++
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            47899999 899999999999999999999997644

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=90.55  E-value=0.49  Score=39.35  Aligned_cols=97  Identities=18%  Similarity=0.186  Sum_probs=64.0

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLM--GCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLD  226 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~--g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~  226 (356)
                      .++.++.+||=.| + |.|..+..+++..  +++|++++.+++.+          +.+++   ..+....+...   ++.
T Consensus        23 ~~~~~~~~ILDiG-c-G~G~~~~~la~~~~~~~~v~giD~s~~~l----------~~a~~~~~~~~~~~~f~~~---d~~   87 (281)
T d2gh1a1          23 WKITKPVHIVDYG-C-GYGYLGLVLMPLLPEGSKYTGIDSGETLL----------AEARELFRLLPYDSEFLEG---DAT   87 (281)
T ss_dssp             SCCCSCCEEEEET-C-TTTHHHHHHTTTSCTTCEEEEEECCHHHH----------HHHHHHHHSSSSEEEEEES---CTT
T ss_pred             hccCCcCEEEEec-C-cCCHHHHHHHHhCCCCCEEEEEecchhHh----------hhhhccccccccccccccc---ccc
Confidence            4567788999888 4 4688888998876  57999999998876          55542   23432112111   111


Q ss_pred             HHHHHhCCCCccEEEeCCC-----c--hHHHHHHHhhccCCeEEEEc
Q 018404          227 AALKRCFPEGIDIYFEHVG-----G--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                       .+ . ..+.+|+|+....     .  ..++.+.+.|+|+|.++...
T Consensus        88 -~~-~-~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          88 -EI-E-LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             -TC-C-CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             -cc-c-ccCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence             01 1 1237999986432     2  36789999999999998765

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.48  E-value=0.11  Score=40.41  Aligned_cols=35  Identities=11%  Similarity=0.073  Sum_probs=30.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSRE  192 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~  192 (356)
                      +++|+|.| +|..|+.++..++..|+ .|+++.+++.
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            57899999 89999999999999998 5888887654

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=90.36  E-value=0.087  Score=41.24  Aligned_cols=91  Identities=14%  Similarity=0.059  Sum_probs=56.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHh---hc-CCCEEEecCCcccHHHHHHHhC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKN---KF-GFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~-g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      +|.|.||+|-+|+-.++|+..+ ..++..+.++...-          ..+.+   .+ +.+... ...   .    .+..
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG----------~~~~~~~~~~~~~~~~~-~~~---~----~~~~   68 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAG----------EQFGSVFPHLITQDLPN-LVA---V----KDAD   68 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTT----------SCHHHHCGGGTTSCCCC-CBC---G----GGCC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCC----------Ccccccccccccccccc-chh---h----hhhh
Confidence            6899999999999999999988 55766665443321          11110   11 111000 000   0    0000


Q ss_pred             CCCccEEEeCCCchHHHHHHHhhccCCeEEEEcc
Q 018404          234 PEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       234 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ..+.|++|-|............+...+.++....
T Consensus        69 ~~~~Dvvf~alp~~~s~~~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          69 FSNVDAVFCCLPHGTTQEIIKGLPQELKIVDLSA  102 (183)
T ss_dssp             GGGCSEEEECCSSSHHHHHHHTSCSSCEEEECSS
T ss_pred             hcccceeeeccccchHHHHHHHHHhcCcccccch
Confidence            1258999999999777777788888888876544

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=90.25  E-value=0.039  Score=42.48  Aligned_cols=91  Identities=18%  Similarity=0.211  Sum_probs=59.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcC----C---CEEEecCCcccHHHHHH
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFG----F---DDAFNYKEENDLDAALK  230 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g----~---~~vv~~~~~~~~~~~~~  230 (356)
                      +|.|+|++|=+|++.++++... ++++++....+...           .+-...|    .   ...+..    +.    .
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~-----------~~g~d~~~~~~~~~~~~~~~~----~~----~   66 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSS-----------LLGSDAGELAGAGKTGVTVQS----SL----D   66 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCT-----------TCSCCTTCSSSSSCCSCCEES----CS----T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccch-----------hccchhhhhhccccCCceeec----cH----H
Confidence            6899999999999999988876 77877766544331           0000111    1   000111    11    1


Q ss_pred             HhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEcccc
Q 018404          231 RCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMIS  269 (356)
Q Consensus       231 ~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  269 (356)
                      +. -..+|+++|++-.+.....++.....|.=+.+|+++
T Consensus        67 ~~-~~~~DViIDFs~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          67 AV-KDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             TT-TTSCSEEEECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             HH-hcccceEEEeccHHHHHHHHHHHHhccceeEEecCC
Confidence            11 125899999999888888888888888778888765

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.22  E-value=0.32  Score=40.86  Aligned_cols=95  Identities=16%  Similarity=0.112  Sum_probs=62.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcC---------CC-EEEecCCcc
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFG---------FD-DAFNYKEEN  223 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g---------~~-~vv~~~~~~  223 (356)
                      ..-++|||.|  ||-|..+-.+++..+. +|.++.-.++-.          +.++ ++-         .. .++. .   
T Consensus        79 ~~pk~VLiiG--gG~G~~~r~~l~~~~~~~i~~VEiD~~Vi----------~~~~-~~f~~~~~~~~~~r~~i~~-~---  141 (290)
T d1xj5a_          79 PNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVV----------DVSK-QFFPDVAIGYEDPRVNLVI-G---  141 (290)
T ss_dssp             SCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHH----------HHHH-HHCHHHHGGGGSTTEEEEE-S---
T ss_pred             CCCcceEEec--CCchHHHHHHHhcccceeeEEecCCHHHH----------HHHH-HhchhhhccccCCCcEEEE-c---
Confidence            3447999999  4456666677887665 899999888776          6666 431         11 1221 1   


Q ss_pred             cHHHHHHHhCCCCccEEEe-CCC---------c-hHHHHHHHhhccCCeEEEEc
Q 018404          224 DLDAALKRCFPEGIDIYFE-HVG---------G-KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid-~~g---------~-~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +..+.+++...+.+|+||- +..         + +.++.+.++|+++|.++.-.
T Consensus       142 Da~~~l~~~~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         142 DGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             CHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cHHHHHhhccccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            4555666654458997763 332         1 35789999999999998654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=90.21  E-value=0.39  Score=39.10  Aligned_cols=87  Identities=11%  Similarity=0.052  Sum_probs=52.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcc-----hhcc--------ccchhHHHHHHHhhcCCC-EEEecCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSRE-----KVWL--------IPMQSQLVELLKNKFGFD-DAFNYKE  221 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~-----~~~~--------~~~~~~~~~~~~~~~g~~-~vv~~~~  221 (356)
                      +.+|+|.| .||+|-.+++.+..+|. +++.++...=     .+++        -+-.+++++.++ ++..+ .+..+..
T Consensus        30 ~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~-~~np~~~i~~~~~  107 (247)
T d1jw9b_          30 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALT-RINPHIAITPVNA  107 (247)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHH-HHCTTSEEEEECS
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHH-Hhhcccchhhhhh
Confidence            35999999 89999999999999999 7777663210     0011        133466777777 66553 3322322


Q ss_pred             cccHHHHHHHhCCCCccEEEeCCCch
Q 018404          222 ENDLDAALKRCFPEGIDIYFEHVGGK  247 (356)
Q Consensus       222 ~~~~~~~~~~~~~~~~d~vid~~g~~  247 (356)
                      . -......... ..+|+++||....
T Consensus       108 ~-~~~~~~~~~~-~~~divid~~d~~  131 (247)
T d1jw9b_         108 L-LDDAELAALI-AEHDLVLDCTDNV  131 (247)
T ss_dssp             C-CCHHHHHHHH-HTSSEEEECCSSH
T ss_pred             h-hhhccccccc-cccceeeeccchh
Confidence            1 1111122111 1589999999973

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.21  E-value=0.15  Score=42.20  Aligned_cols=34  Identities=18%  Similarity=0.132  Sum_probs=30.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      +++|+|+| +|.-|++++..++..|.+|+++..++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            57899999 89999999999999999999998754

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.18  E-value=0.14  Score=43.69  Aligned_cols=94  Identities=26%  Similarity=0.198  Sum_probs=53.3

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAA  228 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~  228 (356)
                      .+.+|++||-+| +| .|..++.+|+ .|+ +|++++.++...       .+.+.++ ..+..   .++..+-. ++   
T Consensus        30 ~~~~~~~VLDiG-cG-~G~ls~~aa~-~Ga~~V~avd~s~~~~-------~a~~~~~-~n~~~~~v~~~~~~~~-~~---   94 (316)
T d1oria_          30 HLFKDKVVLDVG-SG-TGILCMFAAK-AGARKVIGIECSSISD-------YAVKIVK-ANKLDHVVTIIKGKVE-EV---   94 (316)
T ss_dssp             HHHTTCEEEEET-CT-TSHHHHHHHH-TTCSEEEEEECSTTHH-------HHHHHHH-HTTCTTTEEEEESCTT-TC---
T ss_pred             ccCCcCEEEEEe-cC-CcHHHHHHHH-hCCCEEEEEcCcHHHh-------hhhhHHH-HhCCccccceEeccHH-Hc---
Confidence            355789999998 44 4777776666 576 899999775422       1223333 44442   22222211 11   


Q ss_pred             HHHhCCCCccEEEeC-CCc---------hHHHHHHHhhccCCeEE
Q 018404          229 LKRCFPEGIDIYFEH-VGG---------KMLDAVLLNMRLHGRIA  263 (356)
Q Consensus       229 ~~~~~~~~~d~vid~-~g~---------~~~~~~~~~l~~~G~~v  263 (356)
                        +...+.+|+|+.. .+.         ..+....+.|+|+|+++
T Consensus        95 --~~~~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_          95 --ELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             --CCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             --ccccceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence              1111378998752 221         13455668999999886

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.10  E-value=0.23  Score=35.37  Aligned_cols=35  Identities=17%  Similarity=0.097  Sum_probs=31.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      .++|+|.| +|.+|+-+++.++.+|.+|+.+.+.+.
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            46899999 899999999999999999999988754

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.01  E-value=0.75  Score=39.06  Aligned_cols=32  Identities=19%  Similarity=0.118  Sum_probs=29.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG  189 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~  189 (356)
                      ++|||+||+|-+|...+..+...|.+|+++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~   34 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN   34 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            58999999999999999998889999999863

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.70  E-value=4  Score=34.74  Aligned_cols=106  Identities=18%  Similarity=0.172  Sum_probs=66.4

Q ss_pred             HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc---chhccccchhHHHHHHHhhcCCCEEEecCC-----
Q 018404          150 EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR---EKVWLIPMQSQLVELLKNKFGFDDAFNYKE-----  221 (356)
Q Consensus       150 ~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~-----  221 (356)
                      ..+.++++..|+... +|..|.+++..|+.+|.+.+++....   ++.          +.++ .+|++.+.....     
T Consensus        90 ~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~----------~~i~-~~GA~vv~v~~~~~~~~  157 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPT-SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKV----------DVLR-ALGAEIVRTPTNARFDS  157 (355)
T ss_dssp             HHTCSCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEECSCCCHHHH----------HHHH-HTTCEEEECCC------
T ss_pred             HcCCcccCceEEEec-ccchhhHHHHHHHhccCCeEEEeeccchHHHH----------HHHH-hcCCeEEEecccccchh
Confidence            335667777665555 89999999999999999877776543   344          6666 888854331100     


Q ss_pred             -------------------------c-cc-------HHHHHHHhCCCCccEEEeCCCc-hHH---HHHHHhhccCCeEEE
Q 018404          222 -------------------------E-ND-------LDAALKRCFPEGIDIYFEHVGG-KML---DAVLLNMRLHGRIAA  264 (356)
Q Consensus       222 -------------------------~-~~-------~~~~~~~~~~~~~d~vid~~g~-~~~---~~~~~~l~~~G~~v~  264 (356)
                                               . .+       ...++.+..++.+|.++-++|+ ..+   -..++...+.-+++.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~  237 (355)
T d1jbqa_         158 PESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIG  237 (355)
T ss_dssp             -CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEE
T ss_pred             hhhhhhHHHHHHHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEe
Confidence                                     0 00       1112222234468999999997 444   344555667778877


Q ss_pred             Ecc
Q 018404          265 CGM  267 (356)
Q Consensus       265 ~g~  267 (356)
                      +..
T Consensus       238 vep  240 (355)
T d1jbqa_         238 VDP  240 (355)
T ss_dssp             EEE
T ss_pred             ecc
Confidence            654

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.41  E-value=0.17  Score=37.87  Aligned_cols=89  Identities=11%  Similarity=0.008  Sum_probs=51.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc---CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM---GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~---g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      +|.|.||+|-+|+-.++++..+   ..++..++++...-          +.+  .+..... ...   +.    ....-.
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~G----------k~i--~~~~~~~-~~~---~~----~~~~~~   63 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG----------QRM--GFAESSL-RVG---DV----DSFDFS   63 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT----------CEE--EETTEEE-ECE---EG----GGCCGG
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCC----------cce--eeccccc-hhc---cc----hhhhhc
Confidence            5899999999999999999754   34777666553332          111  1111111 010   00    000012


Q ss_pred             CccEEEeCCCchHHHH-HHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGGKMLDA-VLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~~~~~~-~~~~l~~~G~~v~~g~  267 (356)
                      +.|++|-|.+...... .-+.+..+.+++..+.
T Consensus        64 ~~d~vf~a~p~~~s~~~~~~~~~~g~~VID~Ss   96 (144)
T d2hjsa1          64 SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSG   96 (144)
T ss_dssp             GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTC
T ss_pred             cceEEEecCCcchhhhhccccccCCceEEeech
Confidence            6899999999865544 4445556666666654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.17  E-value=0.48  Score=34.54  Aligned_cols=40  Identities=15%  Similarity=-0.005  Sum_probs=35.3

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      .++++.+|+|.| +|.+|+-++..++.+|.+|..+.+.+.-
T Consensus        31 ~~~~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          31 QLIADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             hhccCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence            456788999999 8999999999999999999999987653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.03  E-value=0.33  Score=35.12  Aligned_cols=38  Identities=11%  Similarity=0.092  Sum_probs=33.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      +..++++|.| +|.+|+-+++..+.+|.+|+.+.+.+.-
T Consensus        24 ~~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          24 EVPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             CCCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             ccCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            3458999999 8999999999999999999999987543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.94  E-value=0.26  Score=41.30  Aligned_cols=34  Identities=21%  Similarity=0.217  Sum_probs=31.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      +|.+|+|.| .|.||..+++++...|++|++++.+
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            578999999 9999999999999999999998854

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.87  E-value=1.1  Score=30.18  Aligned_cols=46  Identities=22%  Similarity=0.187  Sum_probs=35.1

Q ss_pred             EEEEecCCchHHHHH-HHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE
Q 018404          159 YIYVSAASGAVGQLV-GQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD  215 (356)
Q Consensus       159 ~VlI~ga~g~vG~~a-i~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  215 (356)
                      +|-+.| -||+|+.+ +++++..|+.|.+.+..+...     +    +.|+ +.|+..
T Consensus         3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~-----t----~~L~-~~Gi~i   49 (89)
T d1j6ua1           3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETER-----T----AYLR-KLGIPI   49 (89)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHH-----H----HHHH-HTTCCE
T ss_pred             EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChh-----H----HHHH-HCCCeE
Confidence            577888 88999755 689999999999999775432     2    5566 899853

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.75  E-value=0.35  Score=34.23  Aligned_cols=35  Identities=17%  Similarity=0.217  Sum_probs=31.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      .++++|.| +|.+|+-+++.++.+|++|+.+.+.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            37899999 899999999999999999999987754

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=88.74  E-value=0.42  Score=40.45  Aligned_cols=97  Identities=13%  Similarity=0.126  Sum_probs=61.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc-CC-CEE-----EecCCcccHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF-GF-DDA-----FNYKEENDLD  226 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~v-----v~~~~~~~~~  226 (356)
                      ...++|||+|  ||-|..+-.+++.... +|.++.-.++-.          +.++ ++ .. ...     ++..-. +..
T Consensus       105 ~~pk~VLIiG--gG~G~~~rellk~~~v~~v~~VEID~~Vv----------~~a~-~~~~~~~~~~~dprv~i~i~-Da~  170 (312)
T d2b2ca1         105 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVI----------DVAK-KFLPGMSCGFSHPKLDLFCG-DGF  170 (312)
T ss_dssp             SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHH----------HHHH-HHCTTTSGGGGCTTEEEECS-CHH
T ss_pred             CCCCeEEEeC--CCchHHHHHHHHcCCcceEEEEcccHHHH----------HHHH-hhchhhccccCCCCeEEEEc-hHH
Confidence            3456899998  4556666677777664 899999888876          7676 43 21 000     111111 455


Q ss_pred             HHHHHhCCCCccEEEeCCC-----------chHHHHHHHhhccCCeEEEEc
Q 018404          227 AALKRCFPEGIDIYFEHVG-----------GKMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g  266 (356)
                      +.+++ +.+.+|+||--.-           .+.++.+.++|+++|.++.-+
T Consensus       171 ~~l~~-~~~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         171 EFLKN-HKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             HHHHH-CTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             HHHHh-CCCCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            66665 3448999984221           125678889999999998764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.66  E-value=0.25  Score=35.62  Aligned_cols=33  Identities=18%  Similarity=0.022  Sum_probs=29.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      .++++|.| +|.+|+-+++.++.+|++|+.+.++
T Consensus        20 P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            46799999 8999999999999999999999764

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=88.60  E-value=0.6  Score=39.54  Aligned_cols=94  Identities=19%  Similarity=0.144  Sum_probs=60.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhc-----CC----C-EEEecCCcc
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKF-----GF----D-DAFNYKEEN  223 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~----~-~vv~~~~~~  223 (356)
                      ...++|||+|+  |.|..+-.+++.. ..+|.++.-.++-.          +.+++-+     +.    . .++.   . 
T Consensus        76 ~~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi----------~~a~~~f~~~~~~~~~d~rv~i~~---~-  139 (312)
T d1uira_          76 PEPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELV----------EVAKRHMPEWHQGAFDDPRAVLVI---D-  139 (312)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHH----------HHHHHHCHHHHTTGGGCTTEEEEE---S-
T ss_pred             CCcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHH----------HHHHhcCcccccCccCCCceEEEE---c-
Confidence            34579999994  4566667777776 45999999888876          6665222     11    1 2221   1 


Q ss_pred             cHHHHHHHhCCCCccEEEe-C---CCc----------hHHHHHHHhhccCCeEEEE
Q 018404          224 DLDAALKRCFPEGIDIYFE-H---VGG----------KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~vid-~---~g~----------~~~~~~~~~l~~~G~~v~~  265 (356)
                      +..+.+++ +.+.+|+||- .   .+.          +.++.+.+.|+++|.++.-
T Consensus       140 Da~~~l~~-~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         140 DARAYLER-TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             CHHHHHHH-CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             hHHHHhhh-cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            55556655 3447999874 2   221          2568899999999998753

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.58  E-value=4.3  Score=31.47  Aligned_cols=129  Identities=13%  Similarity=0.072  Sum_probs=70.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCC--cccHHHHHHHhCCCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE--ENDLDAALKRCFPEG  236 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~--~~~~~~~~~~~~~~~  236 (356)
                      +|++.| .+.+|..+++.+...|.+|.++...+++.......+.+++.++ +.+... +...+  .+.+.+.+++.   .
T Consensus         2 kiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~-~~~i~~-~~~~~~~~~~~~~~i~~~---~   75 (203)
T d2blna2           2 KTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAA-ERGIPV-YAPDNVNHPLWVERIAQL---S   75 (203)
T ss_dssp             EEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHH-HHTCCE-ECCSCCCSHHHHHHHHHT---C
T ss_pred             eEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHH-HcCCcc-eecccccchhhhhhhhhh---c
Confidence            477777 8899999999988889988777654332111122334556666 667642 22211  11455555543   5


Q ss_pred             ccEEEeCCCchHHHHHHHhhccCCeEEEEccccccCCCCCccccchHHHHhhcceeeceee
Q 018404          237 IDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVV  297 (356)
Q Consensus       237 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (356)
                      +|++|-+..+..+..-+-...+.|.+-.-...    ++...........+..+....|..+
T Consensus        76 ~Dlii~~g~~~ii~~~il~~~~~~~iN~H~sl----LP~yrG~~p~~wai~~g~~~~G~Ti  132 (203)
T d2blna2          76 PDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL----LPKYRGRAPLNWVLVNGETETGVTL  132 (203)
T ss_dssp             CSEEEEESCCSCCCHHHHTTCTTCEEEEESSC----TTTTEESCHHHHHHHTTCSEEEEEE
T ss_pred             ccceeeeecccchhcccchhhHHHHHHHhhhc----chhhhhhhhhhhhhhccccccccee
Confidence            89998776555555444455566665443331    1112233334444555555555443

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.57  E-value=0.31  Score=39.24  Aligned_cols=37  Identities=14%  Similarity=0.180  Sum_probs=32.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      ..+++|+|.| +|..|+.++..++..|.+|+++..+++
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeeccc
Confidence            4568999999 899999999999999999999987654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=88.56  E-value=0.31  Score=37.83  Aligned_cols=83  Identities=20%  Similarity=0.210  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      .|.+|.|+| .|.+|...+++++.+|++|++.+++....               .  . ...   +  ++.+.+.+    
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~---------------~--~-~~~---~--~l~ell~~----   92 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEG---------------P--W-RFT---N--SLEEALRE----   92 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCS---------------S--S-CCB---S--CSHHHHTT----
T ss_pred             cCceEEEec-cccccccceeeeecccccccccccccccc---------------c--e-eee---e--chhhhhhc----
Confidence            478999999 89999999999999999999998765442               1  1 011   1  33333433    


Q ss_pred             CccEEEeCCCc-h-H----HHHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-K-M----LDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~-~----~~~~~~~l~~~G~~v~~g~  267 (356)
                       .|+|+-+..- + +    -...++.|+++..+|.++.
T Consensus        93 -sDiv~~~~pl~~~t~~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1          93 -ARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             -CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             -cchhhcccccccccccccccceeeeccccceEEeccc
Confidence             6888776643 1 1    1577888999999998875

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=88.51  E-value=2.3  Score=32.11  Aligned_cols=99  Identities=18%  Similarity=0.127  Sum_probs=52.7

Q ss_pred             CCCCCCEEEEec-CCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHHHHHH
Q 018404          153 APKKGEYIYVSA-ASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLDAALK  230 (356)
Q Consensus       153 ~~~~g~~VlI~g-a~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~  230 (356)
                      .+.+|.+||=.+ |+|.+|+   . |...|++|+.++.+++..      +.+.+.++ .++.. .+...+.. .+... .
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~-a~~~ga~vv~vD~~~~a~------~~~~~N~~-~~~~~~~v~~~~~d-~~~~~-~  104 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---E-AASEGWEAVLVEKDPEAV------RLLKENVR-RTGLGARVVALPVE-VFLPE-A  104 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---H-HHHTTCEEEEECCCHHHH------HHHHHHHH-HHTCCCEEECSCHH-HHHHH-H
T ss_pred             cccCCCeEEEeccccchhhh---h-hhhccchhhhcccCHHHH------hhhhHHHH-hhccccceeeeehh-ccccc-c
Confidence            467788876543 3444444   3 334589999988887766      22333344 56664 44332221 22222 2


Q ss_pred             HhCCCCccEEEeC----CCc-hHHHHHH--HhhccCCeEEE
Q 018404          231 RCFPEGIDIYFEH----VGG-KMLDAVL--LNMRLHGRIAA  264 (356)
Q Consensus       231 ~~~~~~~d~vid~----~g~-~~~~~~~--~~l~~~G~~v~  264 (356)
                      ....+.+|+||-.    .+. ..+...+  ..|+++|.++.
T Consensus       105 ~~~~~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         105 KAQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             HHTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             cccCCccceeEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence            2233479999742    222 3444333  35788887664

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.39  E-value=0.36  Score=34.85  Aligned_cols=35  Identities=6%  Similarity=-0.001  Sum_probs=31.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      .++|+|.| +|.+|+-++..++.+|.+|+.+.+++.
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeeccc
Confidence            36899999 899999999999999999999998754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=88.33  E-value=1.4  Score=33.54  Aligned_cols=36  Identities=19%  Similarity=0.040  Sum_probs=32.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ..|-++| .|.+|...+.-+...|.+|++.++++++.
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~   38 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKV   38 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            3578899 89999998888888899999999999988

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.15  E-value=0.24  Score=37.05  Aligned_cols=34  Identities=21%  Similarity=0.167  Sum_probs=30.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      .|.+|||.| +|.+|..-+..+...|++|++++..
T Consensus        12 ~gkrvLViG-gG~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          12 KDKRILLIG-GGEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             TTCEEEEEE-ESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            478999999 6999999999999999999999753

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.07  E-value=0.39  Score=38.27  Aligned_cols=97  Identities=13%  Similarity=0.056  Sum_probs=63.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcC---CCEEEecCCcccHHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFG---FDDAFNYKEENDLDAAL  229 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~vv~~~~~~~~~~~~  229 (356)
                      ...++.+||=+|  .|.|..+..+++..+.+|++++.+++-+          +.+++.+.   ... +.+... ++    
T Consensus        57 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l----------~~ak~~~~~~~~~~-~~f~~~-d~----  118 (222)
T d2ex4a1          57 NKTGTSCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFL----------VQAKTYLGEEGKRV-RNYFCC-GL----  118 (222)
T ss_dssp             -CCCCSEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHH----------HHHHHHTGGGGGGE-EEEEEC-CG----
T ss_pred             CCCCCCEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHh----------hccccccccccccc-cccccc-cc----
Confidence            346678999988  5678888888877778999999998887          66663322   221 121111 21    


Q ss_pred             HHhC--CCCccEEEeCCC-----c----hHHHHHHHhhccCCeEEEEcc
Q 018404          230 KRCF--PEGIDIYFEHVG-----G----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       230 ~~~~--~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .++.  .+.+|+|+....     .    ..+..+.+.|+|+|.++....
T Consensus       119 ~~~~~~~~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         119 QDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             GGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            1221  237899987322     2    256788899999999987654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.05  E-value=0.26  Score=42.05  Aligned_cols=34  Identities=18%  Similarity=0.294  Sum_probs=30.2

Q ss_pred             EE-EEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          159 YI-YVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       159 ~V-lI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +| ||+||+|-+|..++..+...|.+|+++++...
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~   36 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS   36 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCc
Confidence            46 99999999999999988889999999998543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.95  E-value=3.7  Score=29.98  Aligned_cols=35  Identities=20%  Similarity=0.092  Sum_probs=29.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCcch
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREK  193 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~--~Vi~~~~~~~~  193 (356)
                      +|.|.||+|.+|..++.++...+.  ++..++..+.+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~   38 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP   38 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc
Confidence            689999889999999999998876  78888876554

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=87.63  E-value=0.7  Score=36.80  Aligned_cols=96  Identities=8%  Similarity=0.015  Sum_probs=59.2

Q ss_pred             HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCC-EEEecCCcccHH
Q 018404          148 FYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD-DAFNYKEENDLD  226 (356)
Q Consensus       148 l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~  226 (356)
                      +....+..++.+||=+|  .|.|..+..+++ .|.+|++++.+++..          +.+++...-. ..+..    ++ 
T Consensus        12 ~~~~~~~~~~~~VLDiG--cG~G~~~~~l~~-~g~~v~giD~s~~~i----------~~a~~~~~~~~~~~~~----~~-   73 (225)
T d2p7ia1          12 VRAFTPFFRPGNLLELG--SFKGDFTSRLQE-HFNDITCVEASEEAI----------SHAQGRLKDGITYIHS----RF-   73 (225)
T ss_dssp             HHHHGGGCCSSCEEEES--CTTSHHHHHHTT-TCSCEEEEESCHHHH----------HHHHHHSCSCEEEEES----CG-
T ss_pred             HHHhhhhCCCCcEEEEe--CCCcHHHHHHHH-cCCeEEEEeCcHHHh----------hhhhcccccccccccc----cc-
Confidence            33344445677899888  455777766654 588999999998887          7777444322 22221    11 


Q ss_pred             HHHHHhC-CCCccEEEeCCCc--------hHHHHHH-HhhccCCeEEEE
Q 018404          227 AALKRCF-PEGIDIYFEHVGG--------KMLDAVL-LNMRLHGRIAAC  265 (356)
Q Consensus       227 ~~~~~~~-~~~~d~vid~~g~--------~~~~~~~-~~l~~~G~~v~~  265 (356)
                         .... .+.+|+|+- .+.        ..+.... ++|+|+|.++..
T Consensus        74 ---~~~~~~~~fD~I~~-~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          74 ---EDAQLPRRYDNIVL-THVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             ---GGCCCSSCEEEEEE-ESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ---cccccccccccccc-cceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence               1111 237999974 331        2355665 679999998754

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.62  E-value=0.33  Score=41.44  Aligned_cols=33  Identities=15%  Similarity=0.159  Sum_probs=30.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG  189 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~  189 (356)
                      -.+|||+||+|-+|...+..+...|.+|+++++
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            358999999999999999999999999999985

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=87.58  E-value=0.52  Score=35.93  Aligned_cols=82  Identities=13%  Similarity=0.230  Sum_probs=56.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI  237 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~  237 (356)
                      +|.|+| .|.+|...+...+.. +++++++.....+.               .... .+..+.+   +.    .. ...+
T Consensus         5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~---------------~~~~-~~~~~~~---~~----~~-~~~~   59 (170)
T d1f06a1           5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATL---------------DTKT-PVFDVAD---VD----KH-ADDV   59 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCC---------------SSSS-CEEEGGG---GG----GT-TTTC
T ss_pred             eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccc---------------cccc-ccccchh---hh----hh-cccc
Confidence            689999 899998888777776 67888777554442               1111 2222222   11    11 1258


Q ss_pred             cEEEeCCCc-hHHHHHHHhhccCCeEEEE
Q 018404          238 DIYFEHVGG-KMLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       238 d~vid~~g~-~~~~~~~~~l~~~G~~v~~  265 (356)
                      |+|+.|++. .....+.++|..|-+++.+
T Consensus        60 D~Vvi~tp~~~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          60 DVLFLCMGSATDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             SEEEECSCTTTHHHHHHHHHTTTSEEECC
T ss_pred             ceEEEeCCCcccHHHHHHHHHCCCcEEEe
Confidence            999999998 6888999999999887754

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.58  E-value=1.9  Score=35.69  Aligned_cols=102  Identities=19%  Similarity=0.238  Sum_probs=60.7

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCE-EEecCCcccHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDD-AFNYKEENDLDAA  228 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~  228 (356)
                      ....++|++||=.  +.+-|-=+.+++..+ +.+|++.+.++.++      ..+.+.++ .+|... ++...+. ...  
T Consensus        97 ~L~~~~g~~vLD~--CAaPGgKt~~la~l~~~~~i~a~d~~~~R~------~~l~~~~~-r~g~~~~~~~~~~~-~~~--  164 (284)
T d1sqga2          97 WLAPQNGEHILDL--CAAPGGKTTHILEVAPEAQVVAVDIDEQRL------SRVYDNLK-RLGMKATVKQGDGR-YPS--  164 (284)
T ss_dssp             HHCCCTTCEEEEE--SCTTCHHHHHHHHHCTTCEEEEEESSTTTH------HHHHHHHH-HTTCCCEEEECCTT-CTH--
T ss_pred             ccCccccceeEec--cCccccchhhhhhhhhhhhhhhhhcchhhh------hhHhhhhh-cccccceeeecccc-ccc--
Confidence            3467889987644  233333334455444 46899999999987      44555666 788753 3333221 211  


Q ss_pred             HHHhCCCCccEEEe---CCCch--------------------------HHHHHHHhhccCCeEEEE
Q 018404          229 LKRCFPEGIDIYFE---HVGGK--------------------------MLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       229 ~~~~~~~~~d~vid---~~g~~--------------------------~~~~~~~~l~~~G~~v~~  265 (356)
                       .....+.||.|+-   |+|..                          .+..+++.|+++|++|..
T Consensus       165 -~~~~~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYs  229 (284)
T d1sqga2         165 -QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA  229 (284)
T ss_dssp             -HHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             -hhcccccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence             1122236887765   77742                          246667788999988754

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=87.55  E-value=0.33  Score=40.05  Aligned_cols=31  Identities=16%  Similarity=0.170  Sum_probs=24.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      +|||+||+|-+|...+..+...|. ++++.+.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~   32 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVH   32 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECC
Confidence            599999999999998887776664 5555544

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.32  E-value=0.38  Score=40.27  Aligned_cols=38  Identities=16%  Similarity=0.111  Sum_probs=32.6

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      ......+|+|+| +|..|+.++..+...|.+|+++..++
T Consensus        26 ~~~~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            345567999999 89999999999999999999998654

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=87.30  E-value=3.5  Score=34.25  Aligned_cols=97  Identities=14%  Similarity=0.147  Sum_probs=58.4

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCC----------
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKE----------  221 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~----------  221 (356)
                      +.+.++++|+... +|.-|.+++..++..|.+.+++.......       ...+.++ .+|+..+.....          
T Consensus        56 g~~~~~~~vv~~S-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~-------~k~~~~~-~~GA~vv~~~~~~~~~~~~~~~  126 (310)
T d1y7la1          56 GTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSL-------ERKRLLC-GLGVNLVLTEGAKGMKGAIAKA  126 (310)
T ss_dssp             TSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCH-------HHHHHHH-HTTCEEEEECGGGHHHHHHHHH
T ss_pred             CCCCCCceeeeec-CCCchHHHHHHHHHhhccccccchhhhhh-------hhhhhHH-HhCCceEeccCccccchhhHHH
Confidence            5567777666655 99999999999999999655555432211       0115555 777754431110          


Q ss_pred             -------------------cc-------cHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhc
Q 018404          222 -------------------EN-------DLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMR  257 (356)
Q Consensus       222 -------------------~~-------~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~  257 (356)
                                         ..       ....++.+..++.+|.++-++|+ ..+.-..+.++
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         127 EEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             HHHHHHCTTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             HHHHHhhcCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                               00       01223444444578999999998 56666666554

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.05  E-value=0.51  Score=36.87  Aligned_cols=36  Identities=22%  Similarity=0.243  Sum_probs=32.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchh
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV  194 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~  194 (356)
                      ++|.|.| +|.+|...++++...|++|+..+.+++.+
T Consensus         5 kkvaViG-aG~mG~~iA~~~a~~G~~V~l~D~~~~~l   40 (192)
T d1f0ya2           5 KHVTVIG-GGLMGAGIAQVAAATGHTVVLVDQTEDIL   40 (192)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             EEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECChHHH
Confidence            4899999 79999999999999999999999998765

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=87.01  E-value=1.2  Score=35.50  Aligned_cols=91  Identities=12%  Similarity=0.154  Sum_probs=56.7

Q ss_pred             EEEEecCCchHHH-HHHHHHHHc-CCEEEEEeC-CcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHHhC
Q 018404          159 YIYVSAASGAVGQ-LVGQFAKLM-GCYVVGSAG-SREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       159 ~VlI~ga~g~vG~-~ai~la~~~-g~~Vi~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~~  233 (356)
                      +|.|.| +|.+|. ..+...+.. ++++++++. +.++.          +.+.++++..  .+..++   ++.+.+.   
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a----------~~~~~~~~i~~~~~~~~~---d~~ell~---   97 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKA----------KIVAAEYGVDPRKIYDYS---NFDKIAK---   97 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHH----------HHHHHHTTCCGGGEECSS---SGGGGGG---
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHH----------HHHHHhhccccccccccC---chhhhcc---
Confidence            789999 899986 344444444 778887765 44454          4444377763  233333   2222222   


Q ss_pred             CCCccEEEeCCCc-hHHHHHHHhhccCCeEEEEcc
Q 018404          234 PEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       234 ~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ...+|+|+.|+.. .+...+.++|..+= =+.+..
T Consensus        98 ~~~iD~V~I~tp~~~H~~~~~~al~~gk-~v~~EK  131 (221)
T d1h6da1          98 DPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEK  131 (221)
T ss_dssp             CTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECS
T ss_pred             cccceeeeeccchhhhhhHHHHhhhcch-hhhcCC
Confidence            1279999999998 67788888887654 455654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.97  E-value=0.79  Score=36.99  Aligned_cols=43  Identities=23%  Similarity=0.277  Sum_probs=33.0

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHH-HHcCCEEEEEeCC
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFA-KLMGCYVVGSAGS  190 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la-~~~g~~Vi~~~~~  190 (356)
                      ++.....--+|.+|+|.| .|.||..+++++ +..|++|++++.+
T Consensus        21 ~~~~~~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          21 AMDVLGIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             HHHHTTCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             HHHHcCCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence            344433334688999999 999999999877 6789999988754

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.95  E-value=0.69  Score=38.40  Aligned_cols=94  Identities=13%  Similarity=0.040  Sum_probs=57.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC------------C---EEEec
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF------------D---DAFNY  219 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~------------~---~vv~~  219 (356)
                      .+.++|||.|+.  -|..+-.+++.-..+|.++.-.++-.          +.+++-++.            +   .++. 
T Consensus        71 ~~p~~vLiiG~G--~G~~~~~~l~~~~~~v~~VEiD~~Vi----------~~a~~~f~~~~~~~~~~~~~~d~rv~i~~-  137 (276)
T d1mjfa_          71 PKPKRVLVIGGG--DGGTVREVLQHDVDEVIMVEIDEDVI----------MVSKDLIKIDNGLLEAMLNGKHEKAKLTI-  137 (276)
T ss_dssp             SCCCEEEEEECT--TSHHHHHHTTSCCSEEEEEESCHHHH----------HHHHHHTCTTTTHHHHHHTTCCSSEEEEE-
T ss_pred             CCCceEEEecCC--chHHHHHHHHhCCceEEEecCCHHHH----------HHHHHhhhhccchhhhhhccCCCCceEEE-
Confidence            445799999944  34444555664445899888887766          666522221            1   2222 


Q ss_pred             CCcccHHHHHHHhCCCCccEEEe-CCCc----------hHHHHHHHhhccCCeEEEEc
Q 018404          220 KEENDLDAALKRCFPEGIDIYFE-HVGG----------KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~d~vid-~~g~----------~~~~~~~~~l~~~G~~v~~g  266 (356)
                        . +....+++  .+.+|+||- +...          +.+..+.+.|+++|.++.-+
T Consensus       138 --~-Da~~~l~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         138 --G-DGFEFIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             --S-CHHHHHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --C-hHHHHHhc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence              1 44455554  347998864 3321          35788999999999988543

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=86.92  E-value=0.53  Score=39.08  Aligned_cols=95  Identities=15%  Similarity=0.110  Sum_probs=61.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc----CC--C---EEEecCCccc
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF----GF--D---DAFNYKEEND  224 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~----g~--~---~vv~~~~~~~  224 (356)
                      .+.++|||+|  ||-|..+-.+++..+. +|.++.-.++-.          +.+++-+    +.  +   .++..    +
T Consensus        74 ~~p~~vLiiG--gG~G~~~~~~l~~~~~~~i~~VEID~~Vi----------~~a~~~~~~~~~~~~d~r~~i~~~----D  137 (274)
T d1iy9a_          74 PNPEHVLVVG--GGDGGVIREILKHPSVKKATLVDIDGKVI----------EYSKKFLPSIAGKLDDPRVDVQVD----D  137 (274)
T ss_dssp             SSCCEEEEES--CTTCHHHHHHTTCTTCSEEEEEESCHHHH----------HHHHHHCHHHHTTTTSTTEEEEES----C
T ss_pred             CCcceEEecC--CCCcHHHHHHHhcCCcceEEEecCCHHHH----------HHHHHhChhhcccccCCCeEEEec----h
Confidence            3457999998  4556666777777654 899999888876          6655222    22  1   22221    3


Q ss_pred             HHHHHHHhCCCCccEEEeC-CC---------c-hHHHHHHHhhccCCeEEEEc
Q 018404          225 LDAALKRCFPEGIDIYFEH-VG---------G-KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid~-~g---------~-~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ..+.+++. ...+|+||-- ..         + +.++.+.+.|+++|.++.-.
T Consensus       138 ~~~~l~~~-~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         138 GFMHIAKS-ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             SHHHHHTC-CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             HHHHHhhc-CCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            34455542 3489999642 22         1 35789999999999998654

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.72  E-value=0.55  Score=39.20  Aligned_cols=95  Identities=12%  Similarity=0.125  Sum_probs=59.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc----C----CC-EEEecCCccc
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF----G----FD-DAFNYKEEND  224 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~----g----~~-~vv~~~~~~~  224 (356)
                      ...++|||.|  ||-|..+-.+++..+. +|.++.-.++-.          +.+++-+    +    .. .++ ..   |
T Consensus        77 ~~pk~vLiiG--gG~G~~~~~~l~~~~~~~v~~vEiD~~Vv----------~~a~~~~~~~~~~~~d~rv~i~-~~---D  140 (285)
T d2o07a1          77 PNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVI----------QVSKKFLPGMAIGYSSSKLTLH-VG---D  140 (285)
T ss_dssp             SSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHH----------HHHHHHCHHHHGGGGCTTEEEE-ES---C
T ss_pred             cCcCeEEEeC--CCchHHHHHHHHcCCcceeeeccCCHHHH----------HHHHhhchhhccccCCCCceEE-Ec---c
Confidence            4457999998  4555666677777654 888888887766          6665222    1    11 222 11   4


Q ss_pred             HHHHHHHhCCCCccEEEe-CCC----------chHHHHHHHhhccCCeEEEEc
Q 018404          225 LDAALKRCFPEGIDIYFE-HVG----------GKMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ..+.+++ +.+.+|+||- ...          .+.++.+.+.|+++|.++.-.
T Consensus       141 a~~~l~~-~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         141 GFEFMKQ-NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             HHHHHHT-CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHHHHhc-CCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            4555654 3347998874 222          135788899999999998653

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.70  E-value=0.21  Score=38.38  Aligned_cols=96  Identities=13%  Similarity=0.025  Sum_probs=60.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhc----CCCEEEe---cCCcccHHH
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKF----GFDDAFN---YKEENDLDA  227 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~vv~---~~~~~~~~~  227 (356)
                      -.|.+|+|.|-+.-+|.=+..|+.+.|+.|+..... ...          +.-+ ..    -...+-+   +..+ .+.+
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~-~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~-~lk~   93 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN-NIQ----------KFTR-GESLKLNKHHVEDLGEYSED-LLKK   93 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS-EEE----------EEES-CCCSSCCCCEEEEEEECCHH-HHHH
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc-ccc----------cccc-ccceeeeeeccccccccchh-HHhh
Confidence            458999999988899998888888999999855533 221          0000 00    1111111   1111 2333


Q ss_pred             HHHHhCCCCccEEEeCCCchHHHHHHHhhccCCeEEEEccc
Q 018404          228 ALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       228 ~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                      .+.+     +|+++.++|...+.---+.+++|..++.+|..
T Consensus        94 ~~~~-----aDIvIsavG~p~~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1          94 CSLD-----SDVVITGVPSENYKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             HHHH-----CSEEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             cccc-----CCEEEEccCCCccccChhhcccCceEeecccc
Confidence            3333     89999999986543334577888888899863

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.66  E-value=4.3  Score=33.93  Aligned_cols=105  Identities=15%  Similarity=0.160  Sum_probs=65.2

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC---cchhccccchhHHHHHHHhhcCCCEEEecC--------
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS---REKVWLIPMQSQLVELLKNKFGFDDAFNYK--------  220 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~--------  220 (356)
                      +.++.+...+|...+|..|.+++..++.+|.+++++...   +.+.          +.++ .+|++.++...        
T Consensus        59 g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~----------~~i~-~~Ga~vi~~~~~~~~~~~~  127 (320)
T d1z7wa1          59 GLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERR----------IILL-AFGVELVLTDPAKGMKGAI  127 (320)
T ss_dssp             TSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHH----------HHHH-HTTCEEEEECGGGHHHHHH
T ss_pred             CCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhh----------hhhh-ccCcceEEeeccccccccc
Confidence            556666666666669999999999999999976666643   3344          5566 77775433211        


Q ss_pred             --------------------Ccc-------cHHHHHHHhCCCCccEEEeCCCc-hHHH---HHHHhhccCCeEEEEcc
Q 018404          221 --------------------EEN-------DLDAALKRCFPEGIDIYFEHVGG-KMLD---AVLLNMRLHGRIAACGM  267 (356)
Q Consensus       221 --------------------~~~-------~~~~~~~~~~~~~~d~vid~~g~-~~~~---~~~~~l~~~G~~v~~g~  267 (356)
                                          +..       ....++.+...+.+|.++-++|+ ..+.   ..++...+.-+++.+..
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve~  205 (320)
T d1z7wa1         128 AKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP  205 (320)
T ss_dssp             HHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             hhHHHHHHhCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecccc
Confidence                                000       01122333334468999999988 4443   44455666777776653

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=86.57  E-value=0.92  Score=33.69  Aligned_cols=88  Identities=20%  Similarity=0.133  Sum_probs=51.4

Q ss_pred             EEEEecCCchHHHHHHHHHHH-c---CCEEEEEeCCcchhccccchhHHHHHHHhhcCCC--EEEecCCcccHHHHHHHh
Q 018404          159 YIYVSAASGAVGQLVGQFAKL-M---GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFD--DAFNYKEENDLDAALKRC  232 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~-~---g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~~~  232 (356)
                      +|.|.||+|-+|+-.++++.. .   ..++...+++...-          ...  .++..  .+....   +. +.+   
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~g----------k~~--~~~~~~~~~~~~~---~~-~~~---   62 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGV----------PAP--NFGKDAGMLHDAF---DI-ESL---   62 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSS----------BCC--CSSSCCCBCEETT---CH-HHH---
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccc----------ccc--ccCCcceeeeccc---ch-hhh---
Confidence            588999999999999986543 2   35777666554432          111  12211  111111   11 112   


Q ss_pred             CCCCccEEEeCCCchHHHHHHHhhccCC---eEEEEcc
Q 018404          233 FPEGIDIYFEHVGGKMLDAVLLNMRLHG---RIAACGM  267 (356)
Q Consensus       233 ~~~~~d~vid~~g~~~~~~~~~~l~~~G---~~v~~g~  267 (356)
                        ..+|++|-|.+..........+...|   .+|..+.
T Consensus        63 --~~~DvvF~alp~~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          63 --KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             --TTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             --ccccEEEEecCchHHHHHhHHHHHcCCceEEEeCCc
Confidence              25899999999976666666555554   3666654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.55  E-value=0.68  Score=34.50  Aligned_cols=50  Identities=12%  Similarity=-0.009  Sum_probs=40.3

Q ss_pred             hHHHHHHHHHHcCCCCCCEEEEec-CCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          141 GMTAWAGFYEICAPKKGEYIYVSA-ASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       141 ~~tA~~~l~~~~~~~~g~~VlI~g-a~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      +.|....|  ..+..++..|+|.+ +.|-+|+.+++.+..+|++|+.+.+.+.
T Consensus        25 v~t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          25 QLTPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             EECHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             EECHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            34777776  35678888888872 3689999999999999999999998753

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=85.98  E-value=0.61  Score=37.38  Aligned_cols=35  Identities=20%  Similarity=0.120  Sum_probs=30.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      +...+|+|+| +|..|++++..+...|.+|+++++.
T Consensus         4 ~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLG-SGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3445899999 8999999999999999999999864

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=85.95  E-value=0.38  Score=41.56  Aligned_cols=30  Identities=20%  Similarity=0.165  Sum_probs=25.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCE-EEEEe
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCY-VVGSA  188 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~-Vi~~~  188 (356)
                      +|||+||+|-+|..++..+...|.+ |++++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d   32 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID   32 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            5999999999999999888888885 45454

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=85.78  E-value=1.7  Score=33.20  Aligned_cols=90  Identities=12%  Similarity=0.037  Sum_probs=52.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHh---hcCCCEEEecCCcccHHHHHHHhCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKN---KFGFDDAFNYKEENDLDAALKRCFP  234 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~~~~~~~~~  234 (356)
                      +|.|.||+|-+|.-.++++..+ ..++..+.++...-          +.+.+   .+-....+...   +..+...    
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG----------~~i~~~~p~~~~~~~~~~~---~~~~~~~----   65 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAG----------KKLEEIFPSTLENSILSEF---DPEKVSK----   65 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTT----------SBHHHHCGGGCCCCBCBCC---CHHHHHH----
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCC----------CcccccCchhhcccccccc---CHhHhcc----
Confidence            6899999999999999999887 55777666543322          22220   11111112111   2222222    


Q ss_pred             CCccEEEeCCCchHHHHHHHhhccCCeEEEEcc
Q 018404          235 EGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       235 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  267 (356)
                       +.|++|-|.+........... .+-++|..+.
T Consensus        66 -~~dvvf~a~p~~~s~~~~~~~-~~~~VIDlSa   96 (176)
T d1vkna1          66 -NCDVLFTALPAGASYDLVREL-KGVKIIDLGA   96 (176)
T ss_dssp             -HCSEEEECCSTTHHHHHHTTC-CSCEEEESSS
T ss_pred             -ccceEEEccccHHHHHHHHhh-ccceEEecCc
Confidence             389999999986554444433 4556666654

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=85.54  E-value=1.1  Score=36.59  Aligned_cols=102  Identities=13%  Similarity=0.110  Sum_probs=62.6

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAAL  229 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  229 (356)
                      ...+....+||=+|  +|.|..+..+++.. ++++++++.+ +..      +...+.+. +.|....+..... ++   .
T Consensus        76 ~~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dlp-~~~------~~a~~~~~-~~~~~~ri~~~~~-d~---~  141 (256)
T d1qzza2          76 AYDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVELA-GPA------ERARRRFA-DAGLADRVTVAEG-DF---F  141 (256)
T ss_dssp             TSCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEECH-HHH------HHHHHHHH-HTTCTTTEEEEEC-CT---T
T ss_pred             cCCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecCh-HHH------HHHHHHHh-hcCCcceeeeeee-ec---c
Confidence            34567778898888  67789999999988 7899998853 332      12223344 4454211111111 11   1


Q ss_pred             HHhCCCCccEEEeCC-----Cc----hHHHHHHHhhccCCeEEEEcc
Q 018404          230 KRCFPEGIDIYFEHV-----GG----KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       230 ~~~~~~~~d~vid~~-----g~----~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .. .+.++|+++-..     ..    ..++++.+.|+|+|+++.+..
T Consensus       142 ~~-~p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         142 KP-LPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             SC-CSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cc-ccccchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            11 123688887422     11    246888999999999998865

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=85.52  E-value=2.9  Score=29.68  Aligned_cols=91  Identities=10%  Similarity=-0.033  Sum_probs=61.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID  238 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d  238 (356)
                      +++|.| .|.+|..+++.++  +.+|++++.++++.          +.++ ..|.. ++..+.  .-.+.+++..=..++
T Consensus         2 HivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~----------~~~~-~~~~~-~i~Gd~--~~~~~L~~a~i~~A~   64 (129)
T d2fy8a1           2 HVVICG-WSESTLECLRELR--GSEVFVLAEDENVR----------KKVL-RSGAN-FVHGDP--TRVSDLEKANVRGAR   64 (129)
T ss_dssp             CEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHH----------HHHH-HTTCE-EEESCT--TSHHHHHHTTCTTCS
T ss_pred             EEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHH----------HHHH-hcCcc-cccccc--CCHHHHHHhhhhcCc
Confidence            588888 7899988877664  44677788888887          7777 77764 343332  224456664333788


Q ss_pred             EEEeCCCch----HHHHHHHhhccCCeEEEEc
Q 018404          239 IYFEHVGGK----MLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       239 ~vid~~g~~----~~~~~~~~l~~~G~~v~~g  266 (356)
                      .++-+...+    .+-...+.+.|..+++...
T Consensus        65 ~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          65 AVIVNLESDSETIHCILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             EEEECCSSHHHHHHHHHHHHHHCSSSCEEEEC
T ss_pred             EEEEeccchhhhHHHHHHHHHHCCCceEEEEE
Confidence            999888864    2345566778887777654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=85.50  E-value=0.2  Score=37.45  Aligned_cols=82  Identities=15%  Similarity=0.119  Sum_probs=49.6

Q ss_pred             EecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCCCccEEE
Q 018404          162 VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYF  241 (356)
Q Consensus       162 I~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~~~d~vi  241 (356)
                      +.| +|.+|.+.++.++..+..+.+..|+.++.          +.+.+..+.. ..+..+      .+     ...|+||
T Consensus         4 fIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~----------~~l~~~~~~~-~~~~~~------~~-----~~~DiVi   60 (153)
T d2i76a2           4 FVG-TGTLTRFFLECLKDRYEIGYILSRSIDRA----------RNLAEVYGGK-AATLEK------HP-----ELNGVVF   60 (153)
T ss_dssp             EES-CCHHHHHHHHTTC----CCCEECSSHHHH----------HHHHHHTCCC-CCSSCC------CC-----C---CEE
T ss_pred             EEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhh----------cchhhccccc-ccchhh------hh-----ccCcEEE
Confidence            567 89999988876655333345678888887          7777344432 212111      01     2479999


Q ss_pred             eCCCchHHHHHHHhhccCCeE-EEEc
Q 018404          242 EHVGGKMLDAVLLNMRLHGRI-AACG  266 (356)
Q Consensus       242 d~~g~~~~~~~~~~l~~~G~~-v~~g  266 (356)
                      -|+..+.+...+..|+..+++ +.+.
T Consensus        61 l~v~d~~i~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          61 VIVPDRYIKTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             ECSCTTTHHHHHTTTCCSSCCEEECC
T ss_pred             EeccchhhhHHHhhhcccceeeeecc
Confidence            999888888888888755554 4443

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=85.20  E-value=0.73  Score=38.46  Aligned_cols=33  Identities=12%  Similarity=0.197  Sum_probs=28.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          158 EYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       158 ~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      ++|||+||+|-+|..++..+...|..++++...
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            489999999999999999998889988876544

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=85.12  E-value=1.8  Score=35.41  Aligned_cols=29  Identities=17%  Similarity=0.205  Sum_probs=25.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-EEEEEe
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGC-YVVGSA  188 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~  188 (356)
                      |||+||+|-+|..++..+...|. +|++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d   31 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVD   31 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEE
Confidence            89999999999999888888896 688875

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.05  E-value=2.5  Score=35.52  Aligned_cols=102  Identities=17%  Similarity=0.198  Sum_probs=62.2

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHH
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAA  228 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  228 (356)
                      ....++|++||=.  +.+-|-=+.+++..++  ..+++.+.++.+.      ..+.+.++ ++|...++..... ..  .
T Consensus       111 ~l~~~~g~~vlD~--CAapGgKt~~l~~~~~~~~~i~a~d~~~~r~------~~l~~~~~-r~~~~~i~~~~~d-~~--~  178 (313)
T d1ixka_         111 ALDPKPGEIVADM--AAAPGGKTSYLAQLMRNDGVIYAFDVDENRL------RETRLNLS-RLGVLNVILFHSS-SL--H  178 (313)
T ss_dssp             HHCCCTTCEEEEC--CSSCSHHHHHHHHHTTTCSEEEEECSCHHHH------HHHHHHHH-HHTCCSEEEESSC-GG--G
T ss_pred             cccCCccceeeec--ccchhhhhHhhhhhcccccceeeeccCHHHH------HHHHHHHH-HHHhhcccccccc-cc--c
Confidence            3568999986533  3444445666777664  4799999998887      33444455 6787544433331 11  1


Q ss_pred             HHHhCCCCccEEEe---CCCch--------------------------HHHHHHHhhccCCeEEEE
Q 018404          229 LKRCFPEGIDIYFE---HVGGK--------------------------MLDAVLLNMRLHGRIAAC  265 (356)
Q Consensus       229 ~~~~~~~~~d~vid---~~g~~--------------------------~~~~~~~~l~~~G~~v~~  265 (356)
                      + ....+.||.|+-   |+|..                          .+..++++++++|++|..
T Consensus       179 ~-~~~~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYs  243 (313)
T d1ixka_         179 I-GELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS  243 (313)
T ss_dssp             G-GGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             c-ccccccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEe
Confidence            1 112236887765   67632                          347778889999987754

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=84.58  E-value=1.5  Score=31.19  Aligned_cols=87  Identities=14%  Similarity=0.078  Sum_probs=48.8

Q ss_pred             CCEEEEecCCchH-----------HHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-CEEEecCCccc
Q 018404          157 GEYIYVSAASGAV-----------GQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DDAFNYKEEND  224 (356)
Q Consensus       157 g~~VlI~ga~g~v-----------G~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~  224 (356)
                      .++|||+| +|+.           +..++.-+|..|.+++.+..+++..          .  . .+.. +++. ...  -
T Consensus         4 ~kkvlViG-sGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTV----------s--t-d~d~aD~lY-fep--l   66 (121)
T d1a9xa4           4 REKIMVLG-GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETV----------S--T-DYDTSDRLY-FEP--V   66 (121)
T ss_dssp             SCEEEEEC-CCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSS----------T--T-STTSSSEEE-CCC--C
T ss_pred             CCEEEEEC-CCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhh----------h--c-ChhhcCceE-Ecc--C
Confidence            46899999 6642           3445555666799999999999876          1  1 2232 3332 111  1


Q ss_pred             HHHHHHHhCC-CCccEEEeCCCchHHHHHHHhhccCC
Q 018404          225 LDAALKRCFP-EGIDIYFEHVGGKMLDAVLLNMRLHG  260 (356)
Q Consensus       225 ~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~l~~~G  260 (356)
                      ..+.+.+... +.+|.|+-..|+.....+...|.+.|
T Consensus        67 t~e~v~~Ii~~E~p~~ii~~~GGQtalnla~~L~~~g  103 (121)
T d1a9xa4          67 TLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAG  103 (121)
T ss_dssp             SHHHHHHHHHHHCCSEEECSSSTHHHHTTHHHHHHTT
T ss_pred             CHHHHHHHHHHhCCCEEEeehhhhhHHHHHHHHHHcC
Confidence            1122222221 25788888888854333333444444

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=84.42  E-value=3.6  Score=30.39  Aligned_cols=39  Identities=18%  Similarity=0.168  Sum_probs=31.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchh
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKV  194 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~  194 (356)
                      ++..+|.|.| +|.+|..++.++...+. +++..+.++++.
T Consensus         5 ~k~~KI~IIG-aG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           5 QRRKKVAMIG-SGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             SCCCEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             cCCCcEEEEC-CCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            4567899999 59999988888887775 888888777654

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.91  E-value=5.7  Score=28.32  Aligned_cols=88  Identities=17%  Similarity=0.154  Sum_probs=55.3

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhC
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCF  233 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~  233 (356)
                      +.++.+|+|.|-+|.-|..-.+.++..|-+|++-+.....-          +..   .|. .|+|     ...+.+++. 
T Consensus        12 i~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG----------~~~---~gi-PVf~-----tV~eA~~~~-   71 (130)
T d1euca1          12 VDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGG----------KTH---LGL-PVFN-----TVKEAKEQT-   71 (130)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTT----------CEE---TTE-EEES-----SHHHHHHHH-
T ss_pred             EcCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCC----------ccc---cCc-cchh-----hHHHHHHhc-
Confidence            56778999999999999999999999999999877553322          111   111 2332     333444332 


Q ss_pred             CCCccEEEeCCCc-hHHHHHHHhhccCCeEE
Q 018404          234 PEGIDIYFEHVGG-KMLDAVLLNMRLHGRIA  263 (356)
Q Consensus       234 ~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v  263 (356)
                        ++|.-+-++.. .....+++.+..+=+++
T Consensus        72 --~~daSvIfVPp~~a~dAi~EAi~agI~li  100 (130)
T d1euca1          72 --GATASVIYVPPPFAAAAINEAIDAEVPLV  100 (130)
T ss_dssp             --CCCEEEECCCHHHHHHHHHHHHHTTCSEE
T ss_pred             --CCcEEEEecCHHHHHHHHHHHHhCCCCEE
Confidence              35555555665 34455666666654444

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=83.78  E-value=5.5  Score=30.59  Aligned_cols=103  Identities=19%  Similarity=0.247  Sum_probs=62.2

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCcchhccccchhHHHHHHHhh---cCCC-EEEecCCcccHH
Q 018404          152 CAPKKGEYIYVSAASGAVGQLVGQFAKLM-GCYVVGSAGSREKVWLIPMQSQLVELLKNK---FGFD-DAFNYKEENDLD  226 (356)
Q Consensus       152 ~~~~~g~~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~vv~~~~~~~~~  226 (356)
                      ...++|+.+ |-. +-|.|-.+..+++.. +++|++++..++.+          +.+++.   ++.. ..++.+-. ++.
T Consensus        19 l~~~~~~~~-lD~-t~G~Gghs~~il~~~~~~~vi~~D~d~~~l----------~~a~~~l~~~~~r~~~~~~~f~-~~~   85 (192)
T d1m6ya2          19 LKPEDEKII-LDC-TVGEGGHSRAILEHCPGCRIIGIDVDSEVL----------RIAEEKLKEFSDRVSLFKVSYR-EAD   85 (192)
T ss_dssp             HCCCTTCEE-EET-TCTTSHHHHHHHHHCTTCEEEEEESCHHHH----------HHHHHHTGGGTTTEEEEECCGG-GHH
T ss_pred             hCCCCCCEE-EEe-cCCCcHHHHHHHhcCCCCeEEEeechHHHH----------HHHHHhhccccccccchhHHHh-hHH
Confidence            457788744 554 455555555666655 77999999998887          666532   3332 23333222 444


Q ss_pred             HHHHHhCCCCccEEEeCCCc----------------hHHHHHHHhhccCCeEEEEcc
Q 018404          227 AALKRCFPEGIDIYFEHVGG----------------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       227 ~~~~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ..+.....+.+|.|+--.|-                ..+..+.+.|+++|+++.+..
T Consensus        86 ~~~~~~~~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f  142 (192)
T d1m6ya2          86 FLLKTLGIEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISF  142 (192)
T ss_dssp             HHHHHTTCSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEES
T ss_pred             HHHHHcCCCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeecc
Confidence            44555433478877543331                245666778899999887755

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=83.57  E-value=0.77  Score=34.47  Aligned_cols=35  Identities=20%  Similarity=0.233  Sum_probs=29.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMG--CYVVGSAGSR  191 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g--~~Vi~~~~~~  191 (356)
                      .|.+|+|.| +|..|+.+++.++..+  .+|+.+.+.+
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999 8999999998888886  4888887665

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.50  E-value=1.6  Score=35.73  Aligned_cols=100  Identities=13%  Similarity=0.054  Sum_probs=57.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc-----C--CEEEEEeCCcchhccccchhHHHHHHHhhcC----C-CEEEecCC
Q 018404          154 PKKGEYIYVSAASGAVGQLVGQFAKLM-----G--CYVVGSAGSREKVWLIPMQSQLVELLKNKFG----F-DDAFNYKE  221 (356)
Q Consensus       154 ~~~g~~VlI~ga~g~vG~~ai~la~~~-----g--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g----~-~~vv~~~~  221 (356)
                      .++.-+||=.|  .|.|..+..+++..     +  .++++++.++..+          +.+++.+.    . ...++...
T Consensus        38 ~~~~~~VLDiG--cG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l----------~~a~~~~~~~~~~~~~~~~~~~  105 (280)
T d1jqea_          38 TKSEIKILSIG--GGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQI----------AKYKELVAKISNLENVKFAWHK  105 (280)
T ss_dssp             TCSEEEEEEET--CTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHH----------HHHHHHHTTCCSCTTEEEEEEC
T ss_pred             CCCCCeEEEEc--CCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHH----------HHHHHHHhhccccccccccchh
Confidence            34444788887  34455555554432     2  3678888887776          55553321    1 12233333


Q ss_pred             cccHH---HHHHHhC-CCCccEEEeCCC-----c--hHHHHHHHhhccCCeEEEEc
Q 018404          222 ENDLD---AALKRCF-PEGIDIYFEHVG-----G--KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       222 ~~~~~---~~~~~~~-~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  266 (356)
                      . .+.   ....... .+.+|+|+-...     .  ..++.+.++|+|+|.++...
T Consensus       106 ~-~~~~~~~~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~  160 (280)
T d1jqea_         106 E-TSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV  160 (280)
T ss_dssp             S-CHHHHHHHHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             h-hhhhhcchhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEE
Confidence            2 222   2222222 238999986333     2  47889999999999887654

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.38  E-value=0.73  Score=37.41  Aligned_cols=33  Identities=21%  Similarity=0.127  Sum_probs=29.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSRE  192 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~  192 (356)
                      .|+|.| +|..|++++.+++..|. +|.++.++++
T Consensus         3 ~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAG-AGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            589999 89999999999999996 8888887654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.36  E-value=0.76  Score=38.24  Aligned_cols=35  Identities=20%  Similarity=0.171  Sum_probs=30.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      ++..+|+|+| +|--|+.|+..++..|.+|++...+
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            4456899999 8999999999999999999998865

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.03  E-value=3.6  Score=31.20  Aligned_cols=30  Identities=13%  Similarity=0.140  Sum_probs=25.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEe
Q 018404          159 YIYVSAASGAVGQLVGQFAKLM-GCYVVGSA  188 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~-g~~Vi~~~  188 (356)
                      +|.|.||+|-+|+-.++++..+ ..++..+.
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            6899999999999999999998 66765553

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.90  E-value=0.47  Score=39.23  Aligned_cols=33  Identities=21%  Similarity=0.229  Sum_probs=29.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      .|+|.| +|..|++++..++..|.+|+++.+.++
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            489999 799999999999999999999998754

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.63  E-value=6.3  Score=29.42  Aligned_cols=99  Identities=15%  Similarity=0.014  Sum_probs=55.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC----CEEEEEeCCcchhccc------cchhHHHHHHHhhcCCCEEEecCCcccHHHH
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMG----CYVVGSAGSREKVWLI------PMQSQLVELLKNKFGFDDAFNYKEENDLDAA  228 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g----~~Vi~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  228 (356)
                      +|.|.| .|.||...+++.....    .++.++..+.... +-      .......+.+. ....      ... .....
T Consensus         6 ~I~l~G-~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~-~~~~g~~~~~~~~~~~~~~-~~~~------~~~-~~~~~   75 (168)
T d1ebfa1           6 NVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAERSL-ISKDFSPLNVGSDWKAALA-ASTT------KTL-PLDDL   75 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEE-ECSSCSCCSCTTCHHHHHH-TCCC------BCC-CHHHH
T ss_pred             EEEEEe-CCHHHHHHHHHHHHhHHHhhhheEEEEEeeeee-ecccccchHhhhhhhhhhh-hccc------ccc-cHHHH
Confidence            578888 9999999988777652    3677776543321 00      00000011111 1111      010 11222


Q ss_pred             HHHhCCC-CccEEEeCCCc-hHHHHHHHhhccCCeEEEEcc
Q 018404          229 LKRCFPE-GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       229 ~~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      ....... ..++++||.++ +........|..+=++|+..-
T Consensus        76 ~~~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G~hVVTANK  116 (168)
T d1ebfa1          76 IAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNK  116 (168)
T ss_dssp             HHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCC
T ss_pred             HHHhccCCCceEEEEecCChHHHHHHHHHHHcCCeEEecCc
Confidence            2222223 67999999999 556666778888889887654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.38  E-value=0.88  Score=38.62  Aligned_cols=94  Identities=26%  Similarity=0.173  Sum_probs=52.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCC---EEEecCCcccHHHH
Q 018404          153 APKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFD---DAFNYKEENDLDAA  228 (356)
Q Consensus       153 ~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~  228 (356)
                      ...+|++||-+| +| .|..++.+|+ .|+ +|++++.++. .      ..+.+..+ +.+..   .++..+.. ++   
T Consensus        35 ~~~~~~~VLDlG-cG-tG~ls~~aa~-~Ga~~V~avd~s~~-~------~~a~~~~~-~~~~~~~i~~i~~~~~-~l---   99 (328)
T d1g6q1_          35 DLFKDKIVLDVG-CG-TGILSMFAAK-HGAKHVIGVDMSSI-I------EMAKELVE-LNGFSDKITLLRGKLE-DV---   99 (328)
T ss_dssp             HHHTTCEEEEET-CT-TSHHHHHHHH-TCCSEEEEEESSTH-H------HHHHHHHH-HTTCTTTEEEEESCTT-TS---
T ss_pred             ccCCcCEEEEeC-CC-CCHHHHHHHH-hCCCEEEEEeCCHH-H------HHHHHHHH-HhCccccceEEEeehh-hc---
Confidence            456789999998 44 4666665555 566 8999997742 2      11223334 44542   22322211 11   


Q ss_pred             HHHhCCCCccEEEeCC-C----c-h----HHHHHHHhhccCCeEE
Q 018404          229 LKRCFPEGIDIYFEHV-G----G-K----MLDAVLLNMRLHGRIA  263 (356)
Q Consensus       229 ~~~~~~~~~d~vid~~-g----~-~----~~~~~~~~l~~~G~~v  263 (356)
                        ....+.+|+|+... +    . .    .+...-+.|+|+|+++
T Consensus       100 --~~~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         100 --HLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             --CCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             --cCcccceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence              11123789987522 1    1 1    3444557899999885

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.26  E-value=3.2  Score=35.75  Aligned_cols=94  Identities=18%  Similarity=0.140  Sum_probs=60.9

Q ss_pred             EecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhc---CCCEE--------------EecCCcc
Q 018404          162 VSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKF---GFDDA--------------FNYKEEN  223 (356)
Q Consensus       162 I~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~v--------------v~~~~~~  223 (356)
                      |+.+-++.|...+.+|+..|+ +|++.+.+++-.          +.+++..   +....              +..... 
T Consensus        49 vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~----------~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~-  117 (375)
T d2dula1          49 VLDALSATGIRGIRFALETPAEEVWLNDISEDAY----------ELMKRNVMLNFDGELRESKGRAILKGEKTIVINHD-  117 (375)
T ss_dssp             EEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHH----------HHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEES-
T ss_pred             EEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHH----------HHHHHHHHhcCccccccccccccccccceeEeehh-
Confidence            344477889999999998887 899999998877          5554222   22110              111111 


Q ss_pred             cHHHHHHHhCCCCccEE-EeCCCc--hHHHHHHHhhccCCeEEEEcc
Q 018404          224 DLDAALKRCFPEGIDIY-FEHVGG--KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       224 ~~~~~~~~~~~~~~d~v-id~~g~--~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      +....+.+ .+..+|+| ||..|+  +.+..++++++.+|-+....+
T Consensus       118 Da~~~~~~-~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTaT  163 (375)
T d2dula1         118 DANRLMAE-RHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTAT  163 (375)
T ss_dssp             CHHHHHHH-STTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hhhhhhHh-hcCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEec
Confidence            33333332 22378955 889888  688999999999888765543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=82.14  E-value=0.87  Score=38.40  Aligned_cols=35  Identities=17%  Similarity=0.181  Sum_probs=30.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       157 g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      ..+|+|+| +|..|+.++..+...|.+|+++..++.
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            46899999 899999999999989999999997643

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=81.76  E-value=2.7  Score=35.35  Aligned_cols=98  Identities=14%  Similarity=0.029  Sum_probs=58.1

Q ss_pred             cCCCCCCEEEEec-CCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhh---cCC--C--EEEecCCc
Q 018404          152 CAPKKGEYIYVSA-ASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNK---FGF--D--DAFNYKEE  222 (356)
Q Consensus       152 ~~~~~g~~VlI~g-a~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~---~g~--~--~vv~~~~~  222 (356)
                      ..+.+|++||=.. ++|+.+   +..+ ..|+ .|+.++.++...          +.+++.   .|.  +  .++..   
T Consensus       140 ~~~~~g~~VLdlf~~~G~~s---l~aa-~~ga~~V~~vD~s~~a~----------~~a~~N~~~n~l~~~~~~~i~~---  202 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFS---VAAA-MGGAMATTSVDLAKRSR----------ALSLAHFEANHLDMANHQLVVM---  202 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHH---HHHH-HTTBSEEEEEESCTTHH----------HHHHHHHHHTTCCCTTEEEEES---
T ss_pred             HHhhCCCceeecCCCCcHHH---HHHH-hCCCceEEEecCCHHHH----------HHHHHHHHHhcccCcceEEEEc---
Confidence            4577899987553 344444   3333 3576 899999998876          444422   233  2  22322   


Q ss_pred             ccHHHHHHHhC--CCCccEEEeC---CCc-------------hHHHHHHHhhccCCeEEEEcc
Q 018404          223 NDLDAALKRCF--PEGIDIYFEH---VGG-------------KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       223 ~~~~~~~~~~~--~~~~d~vid~---~g~-------------~~~~~~~~~l~~~G~~v~~g~  267 (356)
                       +..+.++...  ++.||+||--   .+.             +.+..++++|+|+|.++.+..
T Consensus       203 -d~~~~l~~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         203 -DVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             -CHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             -cHHHHHHHHHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence             4444444332  2379998741   110             255678899999999987654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=81.60  E-value=0.67  Score=35.20  Aligned_cols=32  Identities=13%  Similarity=0.020  Sum_probs=26.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA  188 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~  188 (356)
                      ++++|+|.| +|.+|+.++.-++.+|.++.++.
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEE
Confidence            578999999 89999999999999998654444

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.57  E-value=0.38  Score=37.23  Aligned_cols=35  Identities=20%  Similarity=0.184  Sum_probs=30.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      ++..|+|.| .|+.|+.++..+.+.|++|+++.+..
T Consensus         4 k~~dVvIIG-GGpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILG-SGPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEEC-CSHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEEeec
Confidence            456799999 89999999999999999999997543

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.41  E-value=0.58  Score=34.22  Aligned_cols=58  Identities=14%  Similarity=0.163  Sum_probs=36.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHH----HHcCCEEEEEeCCcchhc--cccch-hHHHHHHHhhcCCC
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFA----KLMGCYVVGSAGSREKVW--LIPMQ-SQLVELLKNKFGFD  214 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la----~~~g~~Vi~~~~~~~~~~--~~~~~-~~~~~~~~~~~g~~  214 (356)
                      +++++++|.| +|.+|.-++..+    +..|.+|+.+.+++.-+.  ++++- +.+.+.++ +.|.+
T Consensus        35 ~~~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~l~~~~~~~~~~~~~~~l~-~~GV~   99 (137)
T d1m6ia2          35 REVKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVR-REGVK   99 (137)
T ss_dssp             HHCSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHH-TTTCE
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccccCCcccCCHHHHHHHHHHHH-hCCcE
Confidence            4578999999 799985544333    457999999987665431  22222 23344455 66664

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=81.39  E-value=2.3  Score=29.73  Aligned_cols=37  Identities=5%  Similarity=-0.072  Sum_probs=28.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC---CEEEEEeCCcc
Q 018404          155 KKGEYIYVSAASGAVGQLVGQFAKLMG---CYVVGSAGSRE  192 (356)
Q Consensus       155 ~~g~~VlI~ga~g~vG~~ai~la~~~g---~~Vi~~~~~~~  192 (356)
                      +..++++|.| +|.+|.-++..++.++   .+|+.+.+.+.
T Consensus        18 ~~p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          18 EPPRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             SCCSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             hcCCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            3457999999 7999999887777664   47998887654

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.22  E-value=0.69  Score=36.32  Aligned_cols=31  Identities=13%  Similarity=0.117  Sum_probs=27.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      |+|+| +|+.|+.++..+..+|.+|+++...+
T Consensus         6 vvVIG-gGpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIG-GGPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEEC-CCHHHHHHHHHHHHCCCcEEEEEecC
Confidence            78889 79999999999999999999998653

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=81.20  E-value=0.64  Score=35.37  Aligned_cols=31  Identities=13%  Similarity=0.134  Sum_probs=27.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGS  190 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~  190 (356)
                      -|+|+| +|+.|+.++..+.+.|.+|+++.+.
T Consensus         3 DViIIG-gGpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVG-SGPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             cEEEEC-cCHHHHHHHHHHHHcCCeEEEEEEe
Confidence            378999 8999999999999999999999853

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=81.04  E-value=12  Score=30.38  Aligned_cols=38  Identities=16%  Similarity=0.089  Sum_probs=28.5

Q ss_pred             HcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 018404          151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAG  189 (356)
Q Consensus       151 ~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~  189 (356)
                      .+.++++.+|+..+ +|.-|.+++..++.+|.+++++..
T Consensus        55 ~g~~~~~~~vv~as-sGn~g~a~A~~a~~~g~~~~i~~p   92 (302)
T d1fcja_          55 RGVLKPGVELVEPT-NGNTGIALAYVAAARGYKLTLTMP   92 (302)
T ss_dssp             HTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             cCCCCCCceEEEec-cccchhHHHHHHHHhccCCceEEe
Confidence            35667776655544 999999999999999986555553

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=80.91  E-value=8.5  Score=28.24  Aligned_cols=86  Identities=15%  Similarity=0.086  Sum_probs=54.9

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-CCEEEEEeCC-cchhccccchhHHHHHHHhhcCCCEEEecCCcccHHHHHHHhCCC
Q 018404          159 YIYVSAASGAVGQL-VGQFAKLM-GCYVVGSAGS-REKVWLIPMQSQLVELLKNKFGFDDAFNYKEENDLDAALKRCFPE  235 (356)
Q Consensus       159 ~VlI~ga~g~vG~~-ai~la~~~-g~~Vi~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~~~~~~  235 (356)
                      +|.|.| +|.+|.- .+...+.. ++++++++.. .++.          +.+.++++...   + +  ++.+.+     .
T Consensus         3 ri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~----------~~~~~~~~~~~---~-~--~~~~l~-----~   60 (164)
T d1tlta1           3 RIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKA----------LPICESWRIPY---A-D--SLSSLA-----A   60 (164)
T ss_dssp             EEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTH----------HHHHHHHTCCB---C-S--SHHHHH-----T
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhh----------hhhhhcccccc---c-c--cchhhh-----h
Confidence            588999 7999864 56666655 7788877744 4444          44433777642   1 1  333222     2


Q ss_pred             CccEEEeCCCc-hHHHHHHHhhccCCeEEEEcc
Q 018404          236 GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGM  267 (356)
Q Consensus       236 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  267 (356)
                      .+|+|+.|+.. .++..+..+|..+=+ |.+..
T Consensus        61 ~~D~V~I~tp~~~h~~~~~~al~~gk~-V~~EK   92 (164)
T d1tlta1          61 SCDAVFVHSSTASHFDVVSTLLNAGVH-VCVDK   92 (164)
T ss_dssp             TCSEEEECSCTTHHHHHHHHHHHTTCE-EEEES
T ss_pred             hcccccccccchhccccccccccccce-eeccc
Confidence            48999999887 677777777877655 55654

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.90  E-value=0.9  Score=38.04  Aligned_cols=93  Identities=9%  Similarity=0.049  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCcchhccccchhHHHHHHHhhcC---------CC-EEEecCCccc
Q 018404          156 KGEYIYVSAASGAVGQLVGQFAKLMG-CYVVGSAGSREKVWLIPMQSQLVELLKNKFG---------FD-DAFNYKEEND  224 (356)
Q Consensus       156 ~g~~VlI~ga~g~vG~~ai~la~~~g-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g---------~~-~vv~~~~~~~  224 (356)
                      ..++|||+|+  |-|..+-.+++..+ .+|.++.-.++-.          +.++ ++-         .. .++. .   +
T Consensus        89 ~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi----------~~a~-~~~~~~~~~~~d~rv~v~~-~---D  151 (295)
T d1inla_          89 NPKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVI----------EAAR-KYLKQTSCGFDDPRAEIVI-A---N  151 (295)
T ss_dssp             SCCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHH----------HHHH-HHCHHHHGGGGCTTEEEEE-S---C
T ss_pred             CCceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHH----------HHHH-HHHHhhcccccCCCcEEEh-h---h
Confidence            3479999995  44555667777765 4899999888776          6555 321         11 2221 1   4


Q ss_pred             HHHHHHHhCCCCccEEEe-CCC----------c-hHHHHHHHhhccCCeEEEEc
Q 018404          225 LDAALKRCFPEGIDIYFE-HVG----------G-KMLDAVLLNMRLHGRIAACG  266 (356)
Q Consensus       225 ~~~~~~~~~~~~~d~vid-~~g----------~-~~~~~~~~~l~~~G~~v~~g  266 (356)
                      ..+.+++. .+.+|+||- +..          + +.+..+.+.|+++|.++.-.
T Consensus       152 a~~~l~~~-~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         152 GAEYVRKF-KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             HHHHGGGC-SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HHHHHhcC-CCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence            55556543 347999874 211          1 35688999999999998654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=80.81  E-value=3  Score=29.69  Aligned_cols=62  Identities=13%  Similarity=0.185  Sum_probs=47.7

Q ss_pred             HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCcchhccccchhHHHHHHHhhcCCCEEEecC
Q 018404          147 GFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLIPMQSQLVELLKNKFGFDDAFNYK  220 (356)
Q Consensus       147 ~l~~~~~~~~g~~VlI~ga~g~vG~~ai~la~~~g~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vv~~~  220 (356)
                      .| ..++++.-+.+++.-..-..-+.++++++.+|. ++++...+.+..          +.++ ++|++.++++.
T Consensus        57 ~l-~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~----------~~l~-~~G~d~vi~p~  119 (132)
T d1lssa_          57 TL-EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYK----------DVFE-RLGVDVVVSPE  119 (132)
T ss_dssp             HH-HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHH----------HHHH-HTTCSEEECHH
T ss_pred             hh-hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHH----------HHHH-HCCCCEEECHH
Confidence            44 346777777777765466677888999999987 688888777776          8888 99999998653

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=80.73  E-value=3.1  Score=29.74  Aligned_cols=85  Identities=15%  Similarity=0.188  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCchH-----------HHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-CEEEe-cCCc
Q 018404          156 KGEYIYVSAASGAV-----------GQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-DDAFN-YKEE  222 (356)
Q Consensus       156 ~g~~VlI~ga~g~v-----------G~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~vv~-~~~~  222 (356)
                      .-++|||+| +|+.           +.-++.-+|..|.+++.+..+++..          ..   .+.. +++.- .-..
T Consensus         6 ~~kkvlilG-sGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TV----------st---d~d~aD~lYfePlt~   71 (127)
T d1a9xa3           6 DIKSILILG-AGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATI----------MT---DPEMADATYIEPIHW   71 (127)
T ss_dssp             SCCEEEEEC-CCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCG----------GG---CGGGSSEEECSCCCH
T ss_pred             CCCEEEEEC-CCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhh----------hc---ChhhcceeeeecCCH
Confidence            347899999 6642           3444555556699999999998876          11   2222 33321 1111


Q ss_pred             ccHHHHHHHhCCCCccEEEeCCCc-hHHHHHHHhhc
Q 018404          223 NDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMR  257 (356)
Q Consensus       223 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~  257 (356)
                      +.+.+.++.   +.+|.|+-..|+ ..++.+.++..
T Consensus        72 e~v~~Ii~~---E~pd~il~~~GGQtalnla~~L~~  104 (127)
T d1a9xa3          72 EVVRKIIEK---ERPDAVLPTMGGQTALNCALELER  104 (127)
T ss_dssp             HHHHHHHHH---HCCSEEECSSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH---hCcCCeEEEeeeehHhHHHHHHHH
Confidence            122222222   268999999999 45556665543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=80.67  E-value=0.74  Score=36.95  Aligned_cols=32  Identities=19%  Similarity=0.150  Sum_probs=28.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSRE  192 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~  192 (356)
                      |+|.| +|..|++++..+...|.+|+++++++.
T Consensus         5 ViIIG-aG~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            78999 899999998888889999999997654

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=80.24  E-value=6.9  Score=29.31  Aligned_cols=100  Identities=14%  Similarity=0.090  Sum_probs=58.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCcchhccccchhHHHHHHHhhcCC-----CEEEecCCc------c--cH
Q 018404          159 YIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVWLIPMQSQLVELLKNKFGF-----DDAFNYKEE------N--DL  225 (356)
Q Consensus       159 ~VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~vv~~~~~------~--~~  225 (356)
                      +|.|+| -|=+|+.+.+.+...+.+|+++-... ..      +.+ .++. ++..     ...+...+.      .  .+
T Consensus         2 kigING-fGRIGR~~~R~l~~~~i~iv~INd~~-~~------~~~-ayLl-~yDS~hG~~~~~v~~~~~~l~i~g~~I~~   71 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSRGVEVALINDLT-DN------KTL-AHLL-KYDSIYHRFPGEVAYDDQYLYVDGKAIRA   71 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSS-CH------HHH-HHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEE
T ss_pred             EEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCc-ch------hhh-hhee-ecccccCccccccccccceeEecceeEEE
Confidence            578999 99999999998888888888877543 22      111 3333 3321     111111110      0  00


Q ss_pred             --HHHHHHhCCC--CccEEEeCCCc-hHHHHHHHhhccCCeEEEEccc
Q 018404          226 --DAALKRCFPE--GIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMI  268 (356)
Q Consensus       226 --~~~~~~~~~~--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  268 (356)
                        .....++-.+  ++|+|+||+|. .....+...+..+-+=|.+..+
T Consensus        72 ~~~~~p~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  119 (168)
T d2g82a1          72 TAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP  119 (168)
T ss_dssp             ECCSSGGGCCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             EecCChHHCcccccCCceeEeccccccchHHhhhhhccccceeeeccc
Confidence              0001222112  79999999998 6777888888877655556554

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=80.16  E-value=0.78  Score=37.12  Aligned_cols=33  Identities=15%  Similarity=0.142  Sum_probs=29.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCcch
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREK  193 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~~~  193 (356)
                      |+|+| +|+.|++++-.+...|.+|++++.++.-
T Consensus         7 ViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~~~   39 (253)
T d2gqfa1           7 NIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGKKI   39 (253)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence            88999 8999999999999999999999987653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.03  E-value=0.79  Score=36.11  Aligned_cols=31  Identities=13%  Similarity=0.155  Sum_probs=28.1

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 018404          160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR  191 (356)
Q Consensus       160 VlI~ga~g~vG~~ai~la~~~g~~Vi~~~~~~  191 (356)
                      |+|+| +|..|+.++..+...|.+|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            88899 89999999999989999999999864