Citrus Sinensis ID: 018446

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
MEGLVSPKTTPRILFPTLNRRPSKFSIVRSVPASAMDAHRRNGVGFTPIRAQKAETKDGSATISSVMEDAETALKAKEWEVGMLINEVAASQGIKIRRRPPTGPPLHYVGPFQFRIQNEGNTPRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVSGPFTR
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHccccEEEcccccccccccccccCEECcccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccHHHHHHHHHHcccccEEEEEEcccccccccccccccHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHccHHHHHHHHcccHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHccccccEEEEccccccccCEccHHHHHHHHHccccEEEEEcCECcccccc
*************************************************************************LKAKEWEVGMLINEVAASQGIKIRRRPPTGPPLHYVGPFQFRIQNEGNTPRNILEEIVWHKDVEVTQLKQRRPL*MLKN**DNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVSGP***
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MEGLVSPKTTPRILFPTLNRRPSKFSIVRSVPASAMDAHRRNGVGFTPIRAQKAETKDGSATISSVMEDAETALKAKEWEVGMLINEVAASQGIKIRRRPPTGPPLHYVGPFQFRIQNEGNTPRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERGEIIRQKNIIVSGPFTR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Indole-3-glycerol phosphate synthase probableB0CEU2
Indole-3-glycerol phosphate synthase probableB1WQE4
Indole-3-glycerol phosphate synthase probableA5GMK4

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.1.-.-Carbon-carbon lyases.probable
4.1.1.-Carboxy-lyases.probable
4.1.1.48Indole-3-glycerol-phosphate synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3TSM, chain A
Confidence level:very confident
Coverage over the Query: 125-338
View the alignment between query and template
View the model in PyMOL