Citrus Sinensis ID: 018466

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
MEPLVRVQNLVQSGVSQVPRQYIQPLESRPNNHSHDQNNNHTPQSSNINIPLIDLSNPNDTILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGELYQNITISYYPPCPQPELTLGLQPHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARLSVATFHDPAKTVKISPASELVSKSSLLRYRQVVYGDYVSSWYTKGPEGKRNLDALLLDS
ccccccHHHHHHcccccccccccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHcccccHHHHHHHHcccccccEEEcccccccccccccccccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccEEEEccccccccccccccccccccccEEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEccccccEEEEEEEEcccccccEEccccccccccccccccccHHHHHHHHHHcccccccccccccccc
cccHHHHHHHHHcccccccHHccccccccccccccccccccccccccccccEEEcccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccEEEEccEEEEccccccccHHHHEEEcccccccccHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcHcEEEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEcccccEccccHHHcccccccccccccHHHHHHHHHHccccccccHHEEEEcc
MEPLVRVQNLVqsgvsqvprqyiqplesrpnnhshdqnnnhtpqssniniplidlsnpndtiLLDSIRHACREWGafhvinhgvplklLHDVRHvgrsffegcpltdkleyacdnasaasegygskllvanddtvldwrdyfdhhtlplsrrnpsrwpsklipnygkvLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGELYQNitisyyppcpqpeltlglqphsdfgaLTLLIQDDVEGlqvlkdghwvtvqpLSEAIVVILSDQTQILTNGEYISAIHRAITNASRArlsvatfhdpaktvkispaselvsksslLRYRQVVYGDYVsswytkgpegkrnldaLLLDS
MEPLVRVQNlvqsgvsqvprqyIQPLESRPNNHSHDQNNNHTPQSSNINIPLIDLSNPNDTILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLVANDDTVLDWRDYFDHhtlplsrrnpsrwpsklIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGELYQNITISYYPPCPQPELTLGLQPHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARLSVATfhdpaktvkispaselvskssllryRQVVYGDyvsswytkgpegkrnldalllds
MEPLVRVQNLVQSGVSQVPRQYIQPLESRPNNHSHDQNNNHTPQSSNINIPLIDLSNPNDTILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGELYQNITISYYPPCPQPELTLGLQPHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARLSVATFHDPAKTVKISPASELVSKSSLLRYRQVVYGDYVSSWYTKGPEGKRNLDALLLDS
************************************************NIPLIDLSNPNDTILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGELYQNITISYYPPCPQPELTLGLQPHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARLSVATFHDPAKTVKISPASELVSKSSLLRYRQVVYGDYVSSWYTK***************
*EPLVRVQNLVQSGVSQVPRQYIQPLESRPN**********TPQSSNINIPLIDLSNPNDTILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGELYQNITISYYPPCPQPELTLGLQPHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARLSVATFHDPAKTVKISPASELVSKSSLLRYRQVVYGDYVSSWYTKGPEGKRNLDALLLD*
MEPLVRVQNLVQSGVSQVPRQYIQPLESRPNNHSHDQNNNHTPQSSNINIPLIDLSNPNDTILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGELYQNITISYYPPCPQPELTLGLQPHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARLSVATFHDPAKTVKISPASELVSKSSLLRYRQVVYGDYVSSWYTKGPEGKRNLDALLLDS
************S*VSQVPRQYIQPLESRPNNHSH*****HTPQSSNINIPLIDLSNPNDTILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGELYQNITISYYPPCPQPELTLGLQPHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARLSVATFHDPAKTVKISPASELVSKSSLLRYRQVVYGDYVSSWYTKGPEGKRNLDALLLDS
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEPLVRVQNLVQSGVSQVPRQYIQPLESRPNNHSHDQNNNHTPQSSNINIPLIDLSNPNDTILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGELYQNITISYYPPCPQPELTLGLQPHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARLSVATFHDPAKTVKISPASELVSKSSLLRYRQVVYGDYVSSWYTKGPEGKRNLDALLLDS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query355 2.2.26 [Sep-21-2011]
D4N501364 Probable 2-oxoglutarate/F N/A no 0.923 0.901 0.359 9e-58
P51091357 Leucoanthocyanidin dioxyg N/A no 0.898 0.893 0.346 2e-55
Q96323356 Leucoanthocyanidin dioxyg no no 0.921 0.918 0.342 3e-54
D4N500364 Thebaine 6-O-demethylase N/A no 0.938 0.914 0.364 8e-54
P51092430 Leucoanthocyanidin dioxyg N/A no 0.918 0.758 0.332 3e-53
D4N502360 Codeine O-demethylase OS= N/A no 0.938 0.925 0.342 9e-53
O04274362 Leucoanthocyanidin dioxyg N/A no 0.935 0.917 0.332 1e-52
Q39224358 Protein SRG1 OS=Arabidops no no 0.935 0.927 0.325 2e-51
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.923 0.908 0.331 1e-50
Q07512348 Flavonol synthase/flavano N/A no 0.929 0.948 0.325 1e-50
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function desciption
 Score =  224 bits (570), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 130/362 (35%), Positives = 211/362 (58%), Gaps = 34/362 (9%)

Query: 7   VQNLVQSGVSQVPRQYIQPLESRPNNHSHDQNNNHTPQSSNI-----NIPLIDLSN---- 57
           VQ L +  ++++P +YI  +E           N   P  +++      +P+ID+ N    
Sbjct: 18  VQELAKLTLAEIPSRYICTVE-----------NLQLPVGASVIDDHETVPVIDIENLISS 66

Query: 58  --PNDTILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDN 115
               + + LD +  AC+EWG F V+NHGV   L+ +V+   + FF    + +K++Y   +
Sbjct: 67  EPVTEKLELDRLHSACKEWGFFQVVNHGVDTSLVDNVKSDIQGFF-NLSMNEKIKYGQKD 125

Query: 116 ASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDE 175
                EG+G +  VA++D  LDW D F   TLPL  R P  + SKL     + +  YS E
Sbjct: 126 GDV--EGFG-QAFVASEDQTLDWADIFMILTLPLHLRKPHLF-SKLPLPLRETIESYSSE 181

Query: 176 MKLLCEKLLGFISESLGLTSSYMKDAVGELYQNIT----ISYYPPCPQPELTLGLQPHSD 231
           MK L   L   + ++L + +  +K+ + E+++++T    ++YYPPCPQPEL +GL PHSD
Sbjct: 182 MKKLSMVLFEKMEKALQVQAVEIKE-ISEVFKDMTQVMRMNYYPPCPQPELAIGLTPHSD 240

Query: 232 FGALTLLIQ-DDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITN 290
           FG LT+L+Q ++VEGLQ+  +G W++V+PL  A VV + D  +I+TNG Y S  HRA+ N
Sbjct: 241 FGGLTILLQLNEVEGLQIKNEGRWISVKPLPNAFVVNVGDVLEIMTNGMYRSVDHRAVVN 300

Query: 291 ASRARLSVATFHDPAKTVKISPASELVSKSSLLRYRQ-VVYGDYVSSWYTKGPEGKRNLD 349
           +++ RLS+ATFHDP    +I P S L++ ++   +R    YG+ V  ++++  +GK  LD
Sbjct: 301 STKERLSIATFHDPNLESEIGPISSLITPNTPALFRSGSTYGELVEEFHSRKLDGKSFLD 360

Query: 350 AL 351
           ++
Sbjct: 361 SM 362
Non-heme dioxygenase active on an unknown substrate. No activity with (S)-reticuline, salutaridine, papaverine, (S)-corytuberine, oripavine, (S)-scoulerine, pavine, noscapine, codeine or thebaine.
Papaver somniferum (taxid: 3469)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|Q96323|LDOX_ARATH Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|P51092|LDOX_PETHY Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|O04274|LDOX_PERFR Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description
>sp|Q07512|FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
356569949351 PREDICTED: naringenin,2-oxoglutarate 3-d 0.952 0.962 0.655 1e-126
255554713352 Leucoanthocyanidin dioxygenase, putative 0.971 0.980 0.639 1e-126
359475786355 PREDICTED: probable 2-oxoglutarate/Fe(II 0.966 0.966 0.648 1e-125
356537730441 PREDICTED: probable 2-oxoglutarate/Fe(II 0.963 0.775 0.632 1e-123
20260150338 strong similarity to naringenin 3-dioxyg 0.943 0.991 0.612 1e-120
297800516338 hypothetical protein ARALYDRAFT_355126 [ 0.946 0.994 0.611 1e-118
125554188351 hypothetical protein OsI_21782 [Oryza sa 0.960 0.971 0.588 1e-115
115466580352 Os06g0162500 [Oryza sativa Japonica Grou 0.960 0.968 0.588 1e-115
326534104347 predicted protein [Hordeum vulgare subsp 0.952 0.974 0.591 1e-115
223946015372 unknown [Zea mays] 0.946 0.903 0.582 1e-114
>gi|356569949|ref|XP_003553156.1| PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like [Glycine max] Back     alignment and taxonomy information
 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/360 (65%), Positives = 280/360 (77%), Gaps = 22/360 (6%)

Query: 5   VRVQNLVQSGVSQVPRQYIQPLESRPNNHSHDQNNNHTPQSSNINIPLIDLSNPNDT--- 61
            RVQ+L QSG+S+VP QYIQP ++RP  H+  + ++         IP+IDLS+ + T   
Sbjct: 3   TRVQSLAQSGLSRVPPQYIQPPQTRPVRHTAPEPDS---------IPVIDLSSFDPTQRA 53

Query: 62  ILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASE 121
              DSI  ACREWGAFHV NHGVP  LL  +R  G SFF   P+ DKL Y+C  ++AASE
Sbjct: 54  STRDSIARACREWGAFHVTNHGVPPSLLASLRRAGLSFFSDTPIPDKLRYSC--SAAASE 111

Query: 122 GYGSKLLVA-----NDDT-VLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDE 175
           GYGSK+L       ND   VLDWRDYFDHHTLPLSRRNP+RWP +   +Y +++  YSDE
Sbjct: 112 GYGSKMLATTTSDQNDAVQVLDWRDYFDHHTLPLSRRNPNRWP-EFPADYRELVATYSDE 170

Query: 176 MKLLCEKLLGFISESLGLTSSYMKDAVGELYQNITISYYPPCPQPELTLGLQPHSDFGAL 235
           MK+L +KLL  ISESLGL +S ++DAVGE YQNITISYYPPCP+P+LTLGLQ HSD GA+
Sbjct: 171 MKILAQKLLALISESLGLRASCIEDAVGEFYQNITISYYPPCPEPDLTLGLQSHSDMGAI 230

Query: 236 TLLIQDDVEGLQVLKDGH-WVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRA 294
           TLLIQDDV GLQVLK G+ WVTVQPLS+AI+V+L+DQT+I+TNG+Y S  HRAITN  RA
Sbjct: 231 TLLIQDDVGGLQVLKGGNKWVTVQPLSDAILVLLADQTEIITNGKYRSCEHRAITNPDRA 290

Query: 295 RLSVATFHDPAKTVKISPASELVSKSSLLRYRQVVYGDYVSSWYTKGPEGKRNLDALLLD 354
           RLSVATFHDPAKTVKISPASEL++ SSL +YR VVYGDYVSSWYTKGP GKRN+DALLLD
Sbjct: 291 RLSVATFHDPAKTVKISPASELINDSSLAKYRDVVYGDYVSSWYTKGPGGKRNIDALLLD 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255554713|ref|XP_002518394.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223542239|gb|EEF43781.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359475786|ref|XP_002263131.2| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356537730|ref|XP_003537378.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|20260150|gb|AAM12973.1| strong similarity to naringenin 3-dioxygenase [Arabidopsis thaliana] gi|21387115|gb|AAM47961.1| strong similarity to naringenin 3-dioxygenase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297800516|ref|XP_002868142.1| hypothetical protein ARALYDRAFT_355126 [Arabidopsis lyrata subsp. lyrata] gi|297313978|gb|EFH44401.1| hypothetical protein ARALYDRAFT_355126 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|125554188|gb|EAY99793.1| hypothetical protein OsI_21782 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|115466580|ref|NP_001056889.1| Os06g0162500 [Oryza sativa Japonica Group] gi|5295961|dbj|BAA81862.1| putative anthocyanidin synthase [Oryza sativa Japonica Group] gi|113594929|dbj|BAF18803.1| Os06g0162500 [Oryza sativa Japonica Group] gi|125596139|gb|EAZ35919.1| hypothetical protein OsJ_20223 [Oryza sativa Japonica Group] gi|215712352|dbj|BAG94479.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|326534104|dbj|BAJ89402.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|223946015|gb|ACN27091.1| unknown [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.957 0.963 0.408 4.1e-65
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.954 0.933 0.406 3.8e-62
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.946 0.905 0.382 5.7e-59
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.946 0.923 0.375 2.2e-57
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.907 0.922 0.349 7.2e-52
TAIR|locus:2127218356 LDOX "leucoanthocyanidin dioxy 0.918 0.915 0.343 9.2e-52
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.926 0.964 0.352 2.4e-51
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.890 0.908 0.352 5.1e-51
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.923 0.908 0.334 2e-49
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.876 0.873 0.352 3.2e-49
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
 Identities = 146/357 (40%), Positives = 215/357 (60%)

Query:     2 EPLVRVQNLVQSGVSQVPRQYIQPLESRPNNHSHDQNNNHTPQSSNINIPLIDLSNP-ND 60
             EP+V VQ+L Q+GV  VP +Y++P   RP         N T   + I IP++D+++    
Sbjct:     7 EPIVSVQSLSQTGVPTVPNRYVKPAHQRPVF-------NTTQSDAGIEIPVLDMNDVWGK 59

Query:    61 TILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAAS 120
                L  +R AC EWG F ++NHGV   L+  VR   R FFE  PL +K +YA  N+    
Sbjct:    60 PEGLRLVRSACEEWGFFQMVNHGVTHSLMERVRGAWREFFE-LPLEEKRKYA--NSPDTY 116

Query:   121 EGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDEMKLLC 180
             EGYGS+L V  D   LDW DYF  + LP S RNPS+WPS+  P   +++  Y +E++ LC
Sbjct:   117 EGYGSRLGVVKD-AKLDWSDYFFLNYLPSSIRNPSKWPSQP-PKIRELIEKYGEEVRKLC 174

Query:   181 EKLLGFISESLGLTSSYMKDAVG---ELYQNITISYYPPCPQPELTLGLQPHSDFGALTL 237
             E+L   +SESLGL  + +  A+G   ++  ++  ++YP CPQP+LTLGL  HSD G +T+
Sbjct:   175 ERLTETLSESLGLKPNKLMQALGGGDKVGASLRTNFYPKCPQPQLTLGLSSHSDPGGITI 234

Query:   238 LIQDD-VEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARL 296
             L+ D+ V GLQV +   WVT++ +  A++V + DQ QIL+NG Y S  H+ I N+   R+
Sbjct:   235 LLPDEKVAGLQVRRGDGWVTIKSVPNALIVNIGDQLQILSNGIYKSVEHQVIVNSGMERV 294

Query:   297 SVATFHDPAKTVKISPASELVSKSSLLRYRQVVYGDYVSSWYTKGPEGKRNLDALLL 353
             S+A F++P   + + P  ELV+ +    Y+ + + +Y S    KGP GK  +D+LLL
Sbjct:   295 SLAFFYNPRSDIPVGPIEELVTANRPALYKPIRFDEYRSLIRQKGPCGKNQVDSLLL 351
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0010583 "response to cyclopentenone" evidence=RCA
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127218 LDOX "leucoanthocyanidin dioxygenase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.11LOW CONFIDENCE prediction!
3rd Layer1.14.11.13LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 1e-147
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-135
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-109
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 7e-86
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 6e-82
PLN02947374 PLN02947, PLN02947, oxidoreductase 3e-77
PLN02704335 PLN02704, PLN02704, flavonol synthase 1e-70
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 8e-69
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-67
PLN02216357 PLN02216, PLN02216, protein SRG1 5e-67
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-64
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-59
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-59
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 9e-58
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-54
PLN02997325 PLN02997, PLN02997, flavonol synthase 4e-54
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 6e-49
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-46
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 5e-45
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 5e-36
PLN02485329 PLN02485, PLN02485, oxidoreductase 4e-31
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-30
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 1e-30
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 5e-27
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-26
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 8e-24
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 7e-18
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-06
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  416 bits (1071), Expect = e-147
 Identities = 181/263 (68%), Positives = 220/263 (83%), Gaps = 2/263 (0%)

Query: 92  VRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLV-ANDDTVLDWRDYFDHHTLPLS 150
           +R +G SFF+  P+ +KL YACD  SAASEGYGS++L+ A DDTVLDWRD+FDHHT PLS
Sbjct: 1   MRSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLGAKDDTVLDWRDFFDHHTFPLS 60

Query: 151 RRNPSRWPSKLIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGELYQNIT 210
           RRNPS WP    P+Y +V+ +Y D MK L +KLL FISESLGL  S ++DAVG+ YQNIT
Sbjct: 61  RRNPSHWPD-FPPDYREVVGEYGDCMKALAQKLLAFISESLGLPCSCIEDAVGDFYQNIT 119

Query: 211 ISYYPPCPQPELTLGLQPHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSD 270
           +SYYPPCPQPELTLGLQ HSDFGA+TLLIQDDVEGLQ+LKD  W+ V P+S+AI++I++D
Sbjct: 120 VSYYPPCPQPELTLGLQSHSDFGAITLLIQDDVEGLQLLKDAEWLMVPPISDAILIIIAD 179

Query: 271 QTQILTNGEYISAIHRAITNASRARLSVATFHDPAKTVKISPASELVSKSSLLRYRQVVY 330
           QT+I+TNG Y SA HRAI NA++ARLSVATFHDPAKT KI+PAS L ++S   RY ++VY
Sbjct: 180 QTEIITNGNYKSAQHRAIANANKARLSVATFHDPAKTAKIAPASALSTESFPPRYCEIVY 239

Query: 331 GDYVSSWYTKGPEGKRNLDALLL 353
           G+YVSSWY+KGPEGKRN+DALLL
Sbjct: 240 GEYVSSWYSKGPEGKRNIDALLL 262

Length = 262
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 355
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02485329 oxidoreductase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.88
PLN03176120 flavanone-3-hydroxylase; Provisional 99.83
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.63
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.54
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.04
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 93.94
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 85.98
TIGR02466201 conserved hypothetical protein. This family consis 83.87
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=2.4e-83  Score=617.42  Aligned_cols=337  Identities=34%  Similarity=0.635  Sum_probs=301.9

Q ss_pred             hhhHHHHHHc-CCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceeeCCCC----CcHHHHHHHHHHHHHcceEE
Q 018466            4 LVRVQNLVQS-GVSQVPRQYIQPLESRPNNHSHDQNNNHTPQSSNINIPLIDLSNP----NDTILLDSIRHACREWGAFH   78 (355)
Q Consensus         4 ~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l----~~~~~~~~l~~A~~~~Gff~   78 (355)
                      +..|+.|+.+ |+++||++||+|.+++|.+..     ....   ..+||+|||+.+    .+.+++++|.+||++|||||
T Consensus        14 ~~~~~~~~~~~~~~~~p~~~v~p~~~~~~~~~-----~~~~---~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~   85 (357)
T PLN02216         14 VPSVQEMVKEKMITTVPPRYVRSDQDKTEIAV-----DSGL---SSEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQ   85 (357)
T ss_pred             chhHHHHHhcCCCCCCCHhhCcCcccCCcccc-----ccCc---CCCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEE
Confidence            3558999876 899999999999999975421     0011   147999999988    23578999999999999999


Q ss_pred             EEeCCCCHHHHHHHHHHHhHhccCCCHHhhhhhhccCCCCCccCCccCccccCCCCCCCcccccccccCCCCCCCCCCCC
Q 018466           79 VINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWP  158 (355)
Q Consensus        79 l~nhgi~~~l~~~~~~~~~~fF~~lp~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~n~wP  158 (355)
                      |+||||+.++++++++++++||+ ||.|+|+++.....  .++||+...... ..+..||+|.|.+...|.....+|.||
T Consensus        86 v~nHGI~~~li~~~~~~~~~FF~-LP~eeK~k~~~~~~--~~~Gy~~~~~~~-~~~~~d~~e~~~~~~~p~~~~~~~~WP  161 (357)
T PLN02216         86 LVNHGIDSSFLDKVKSEIQDFFN-LPMEEKKKLWQRPG--EIEGFGQAFVVS-EDQKLDWADMFFLTMQPVRLRKPHLFP  161 (357)
T ss_pred             EECCCCCHHHHHHHHHHHHHHHc-CCHHHHHhhhcCCC--CccccCcccccc-ccccCCceeeeeeeccCcccccchhcc
Confidence            99999999999999999999999 99999999976442  378997644333 455779999998876665556679999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHhHHHhhcC-cccceeeeecCCCCCCCcCcccCCCCCCCcEEE
Q 018466          159 SKLIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGE-LYQNITISYYPPCPQPELTLGLQPHSDFGALTL  237 (355)
Q Consensus       159 ~~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~-~~~~lrl~~Yp~~~~~~~~~g~~~HtD~~~lTl  237 (355)
                      +. ++.||+.+++|+++|.+|+.+||++|+++|||++++|.+.+.. ..+.||++|||||+.++..+|+++|||+|+|||
T Consensus       162 ~~-p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTl  240 (357)
T PLN02216        162 KL-PLPFRDTLETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTI  240 (357)
T ss_pred             cc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEE
Confidence            88 8999999999999999999999999999999999999998876 457899999999999888999999999999999


Q ss_pred             Eee-CCCCCceeeeCCceEEecCCCCeEEEEcchhhHHHhcCccccccceecCCCCCceeeeEEEeCCCCCceeecCccc
Q 018466          238 LIQ-DDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARLSVATFHDPAKTVKISPASEL  316 (355)
Q Consensus       238 L~q-d~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~l~~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~  316 (355)
                      |+| ++++||||+++|+|++|+|.||++||||||+||+||||+|||++|||+.++.++||||+||+.|+.|++|+|+++|
T Consensus       241 L~q~~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~l  320 (357)
T PLN02216        241 LLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSL  320 (357)
T ss_pred             EEecCCCCceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHH
Confidence            999 5799999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             cCCCCCCCCCcccHHHHHHHHHHcCCCCCCccccccc
Q 018466          317 VSKSSLLRYRQVVYGDYVSSWYTKGPEGKRNLDALLL  353 (355)
Q Consensus       317 ~~~~~p~~y~~~t~~e~~~~~~~~~~~~~~~~~~~~~  353 (355)
                      +++++|++|+++|++||+..++.+...+++.+|.+||
T Consensus       321 v~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~  357 (357)
T PLN02216        321 VERQKAALFKSLTTKEYFDGLFSRELDGKAYLDAMRI  357 (357)
T ss_pred             cCCCCCCCCCCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence            9999999999999999999999999999999999986

>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-55
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-55
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 8e-54
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-43
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-09
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-05
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  212 bits (540), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/342 (34%), Positives = 191/342 (55%), Gaps = 20/342 (5%)
Query: 6   RVQNLVQSGVSQVPRQYIQPLESRP--NNHSHDQNNNHTPQSSNINIPLIDLSN--PNDT 61
           RV++L +SG+  +P++YI+P E     N+   ++     PQ     +P IDL N   +D 
Sbjct: 5   RVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQ-----VPTIDLKNIESDDE 59
Query: 62  IL----LDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNAS 117
            +    ++ ++ A  +WG  H+INHG+P  L+  V+  G  FF    + +K +YA D A+
Sbjct: 60  KIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFF-SLSVEEKEKYANDQAT 118
Query: 118 AASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDEMK 177
              +GYGSKL   N    L+W DYF H   P  +R+ S WP K   +Y +   +Y+  ++
Sbjct: 119 GKIQGYGSKL-ANNASGQLEWEDYFFHLAYPEEKRDLSIWP-KTPSDYIEATSEYAKCLR 176
Query: 178 LLCEKLLGFISESLGLTSSYMKDAVG---ELYQNITISYYPPCPQPELTLGLQPHSDFGA 234
           LL  K+   +S  LGL    ++  VG   EL   + I+YYP CPQPEL LG++ H+D  A
Sbjct: 177 LLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSA 236
Query: 235 LTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRA 294
           LT ++ + V GLQ+  +G WVT + + ++IV+ + D  +IL+NG+Y S +HR + N  + 
Sbjct: 237 LTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKV 296
Query: 295 RLSVATFHDPAK-TVKISPASELVSKSSLLRYRQVVYGDYVS 335
           R+S A F +P K  + + P  E+VS  S  ++    +  ++ 
Sbjct: 297 RISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIE 338
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-146
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-127
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-76
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 3e-74
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-67
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 7e-66
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  416 bits (1071), Expect = e-146
 Identities = 116/361 (32%), Positives = 190/361 (52%), Gaps = 20/361 (5%)

Query: 1   MEPLVRVQNLVQSGVSQVPRQYIQPLESRPNNHSHDQNNNHTPQSSNINIPLIDLSNPND 60
           M  + RV++L +SG+  +P++YI+P E   + +          +     +P IDL N   
Sbjct: 1   MVAVERVESLAKSGIISIPKEYIRPKEELESINDVFLEE---KKEDGPQVPTIDLKNIES 57

Query: 61  T------ILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACD 114
                    ++ ++ A  +WG  H+INHG+P  L+  V+  G  FF    + +K +YA D
Sbjct: 58  DDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFS-LSVEEKEKYAND 116

Query: 115 NASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSD 174
            A+   +GYGSKL   N    L+W DYF H   P  +R+ S WP     +Y +   +Y+ 
Sbjct: 117 QATGKIQGYGSKL-ANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP-SDYIEATSEYAK 174

Query: 175 EMKLLCEKLLGFISESLGLTSSYMKDAVG---ELYQNITISYYPPCPQPELTLGLQPHSD 231
            ++LL  K+   +S  LGL    ++  VG   EL   + I+YYP CPQPEL LG++ H+D
Sbjct: 175 CLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTD 234

Query: 232 FGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNA 291
             ALT ++ + V GLQ+  +G WVT + + ++IV+ + D  +IL+NG+Y S +HR + N 
Sbjct: 235 VSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNK 294

Query: 292 SRARLSVATFHDPAK-TVKISPASELVSKSSLLRYRQVVYGDYVSSWYTKGPEGKRNLDA 350
            + R+S A F +P K  + + P  E+VS  S  ++    +  ++         GK   + 
Sbjct: 295 EKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKL----FGKEQEEL 350

Query: 351 L 351
           +
Sbjct: 351 V 351
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query355
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.18
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 91.54
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 87.55
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 83.36
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 81.41
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2.9e-83  Score=617.34  Aligned_cols=338  Identities=33%  Similarity=0.652  Sum_probs=300.4

Q ss_pred             CCchhhHHHHHHcCCCCCCCcccCCCCCCCCCCCCCCCCC--CC-CCCCCCCCceeeCCCC--C----cHHHHHHHHHHH
Q 018466            1 MEPLVRVQNLVQSGVSQVPRQYIQPLESRPNNHSHDQNNN--HT-PQSSNINIPLIDLSNP--N----DTILLDSIRHAC   71 (355)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~iPvIDls~l--~----~~~~~~~l~~A~   71 (355)
                      |-+.++||.|+++|+.+||++|++|.++++....     .  .. .. .+.+||||||+.+  .    +.+++++|.+||
T Consensus         1 ~~~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~-----~~~~~~~~-~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~   74 (356)
T 1gp6_A            1 MVAVERVESLAKSGIISIPKEYIRPKEELESIND-----VFLEEKKE-DGPQVPTIDLKNIESDDEKIRENCIEELKKAS   74 (356)
T ss_dssp             -CCCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCC-----HHHHHHCC-CSCCCCEEECTTTTCSCHHHHHHHHHHHHHHH
T ss_pred             CCCcccHHHHHhcCCCCCCHHhcCCchhcccccc-----cccccccc-cCCCCCEEEchhccCCChHHHHHHHHHHHHHH
Confidence            5678899999999999999999999988875310     0  00 00 0147999999998  1    356899999999


Q ss_pred             HHcceEEEEeCCCCHHHHHHHHHHHhHhccCCCHHhhhhhhccCCCCCccCCccCccccCCCCCCCcccccccccCCCCC
Q 018466           72 REWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSR  151 (355)
Q Consensus        72 ~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~~lp~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~~d~~e~~~~~~~p~~~  151 (355)
                      ++||||||+||||+.++++++++.+++||+ ||.|+|+++........++||+...... ..+..||+|+|.+...|...
T Consensus        75 ~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~-lP~eeK~~~~~~~~~~~~~Gy~~~~~~~-~~~~~d~kE~~~~~~~p~~~  152 (356)
T 1gp6_A           75 LDWGVMHLINHGIPADLMERVKKAGEEFFS-LSVEEKEKYANDQATGKIQGYGSKLANN-ASGQLEWEDYFFHLAYPEEK  152 (356)
T ss_dssp             HHTSEEEEESCSCCHHHHHHHHHHHHHHHT-SCHHHHGGGBCBGGGTBCSEEECCCCCS-TTCCCCSCEEEEEEEESGGG
T ss_pred             HhCCEEEEeCCCCCHHHHHHHHHHHHHHHC-CCHHHHHhhcccccccCccccCcCcccC-CCCCCChhheeeeecCCccc
Confidence            999999999999999999999999999999 9999999998765312489998765444 56688999999988766544


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHhHHHhhc---CcccceeeeecCCCCCCCcCcccCC
Q 018466          152 RNPSRWPSKLIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVG---ELYQNITISYYPPCPQPELTLGLQP  228 (355)
Q Consensus       152 ~~~n~wP~~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~g~~~  228 (355)
                      ..+|.||+. +++||+.+++|+++|.+|+..||++|+++||+++++|.+.+.   .+.+.||++|||||+.++..+|+++
T Consensus       153 ~~~~~wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~  231 (356)
T 1gp6_A          153 RDLSIWPKT-PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEA  231 (356)
T ss_dssp             CCGGGSCCS-STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEE
T ss_pred             cccccCCCc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCC
Confidence            567999998 999999999999999999999999999999999999999987   4778899999999999888899999


Q ss_pred             CCCCCcEEEEeeCCCCCceeeeCCceEEecCCCCeEEEEcchhhHHHhcCccccccceecCCCCCceeeeEEEeCCCCCc
Q 018466          229 HSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARLSVATFHDPAKTV  308 (355)
Q Consensus       229 HtD~~~lTlL~qd~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~l~~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~  308 (355)
                      |||+|+||||+||.++||||+++|+|++|+|.||++||||||+||+||||+||||+|||+.++..+|||++||++|+.|+
T Consensus       232 HtD~g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~  311 (356)
T 1gp6_A          232 HTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDK  311 (356)
T ss_dssp             ECCCSSEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTT
T ss_pred             ccCCCeEEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999998889999999999999999


Q ss_pred             -eeecCccccCCCCCCCCCcccHHHHHHHHHHcCCCCCCc
Q 018466          309 -KISPASELVSKSSLLRYRQVVYGDYVSSWYTKGPEGKRN  347 (355)
Q Consensus       309 -~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~~~  347 (355)
                       +|+|+++|+++++|++|+++|++||+..++.++++++..
T Consensus       312 ~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~  351 (356)
T 1gp6_A          312 IVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELV  351 (356)
T ss_dssp             CEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred             cEEeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence             999999999999999999999999999999888766543
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 355
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-69
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-56
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 4e-50
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 7e-41
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  219 bits (559), Expect = 1e-69
 Identities = 114/340 (33%), Positives = 185/340 (54%), Gaps = 16/340 (4%)

Query: 5   VRVQNLVQSGVSQVPRQYIQPLESRPNNHSHDQNNNHTPQSSNINIPLIDLSNPNDT--- 61
            RV++L +SG+  +P++YI+P E   + +          +     +P IDL N       
Sbjct: 4   ERVESLAKSGIISIPKEYIRPKEELESIND---VFLEEKKEDGPQVPTIDLKNIESDDEK 60

Query: 62  ---ILLDSIRHACREWGAFHVINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASA 118
                ++ ++ A  +WG  H+INHG+P  L+  V+  G  FF    + +K +YA D A+ 
Sbjct: 61  IRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFS-LSVEEKEKYANDQATG 119

Query: 119 ASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWPSKLIPNYGKVLCDYSDEMKL 178
             +GYGSKL   N    L+W DYF H   P  +R+ S WP K   +Y +   +Y+  ++L
Sbjct: 120 KIQGYGSKL-ANNASGQLEWEDYFFHLAYPEEKRDLSIWP-KTPSDYIEATSEYAKCLRL 177

Query: 179 LCEKLLGFISESLGLTSSYMKDAVG---ELYQNITISYYPPCPQPELTLGLQPHSDFGAL 235
           L  K+   +S  LGL    ++  VG   EL   + I+YYP CPQPEL LG++ H+D  AL
Sbjct: 178 LATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSAL 237

Query: 236 TLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRAR 295
           T ++ + V GLQ+  +G WVT + + ++IV+ + D  +IL+NG+Y S +HR + N  + R
Sbjct: 238 TFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVR 297

Query: 296 LSVATFHDPAK-TVKISPASELVSKSSLLRYRQVVYGDYV 334
           +S A F +P K  + + P  E+VS  S  ++    +  ++
Sbjct: 298 ISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHI 337
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query355
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 89.69
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.8e-79  Score=585.92  Aligned_cols=330  Identities=34%  Similarity=0.653  Sum_probs=286.2

Q ss_pred             hhHHHHHHcCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceeeCCCC------CcHHHHHHHHHHHHHcceEE
Q 018466            5 VRVQNLVQSGVSQVPRQYIQPLESRPNNHSHDQNNNHTPQSSNINIPLIDLSNP------NDTILLDSIRHACREWGAFH   78 (355)
Q Consensus         5 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l------~~~~~~~~l~~A~~~~Gff~   78 (355)
                      .+|+.|+++|+++||++||+|++++|....-.-.....   ++.+||||||+.+      .+++++++|.+||+++||||
T Consensus         4 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~   80 (349)
T d1gp6a_           4 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKE---DGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH   80 (349)
T ss_dssp             CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCC---CSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred             cchHHHHhCCCccCCHhhcCChhhcCCCCccccccccC---CCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEE
Confidence            57999999999999999999999999663200000011   2368999999998      25678999999999999999


Q ss_pred             EEeCCCCHHHHHHHHHHHhHhccCCCHHhhhhhhccCCCCCccCCccCccccCCCCCCCcccccccccCCCCCCCCCCCC
Q 018466           79 VINHGVPLKLLHDVRHVGRSFFEGCPLTDKLEYACDNASAASEGYGSKLLVANDDTVLDWRDYFDHHTLPLSRRNPSRWP  158 (355)
Q Consensus        79 l~nhgi~~~l~~~~~~~~~~fF~~lp~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~n~wP  158 (355)
                      |+||||+.++++++++++++||+ ||.|+|+++......+.+.||+...... .....++.+.+.....+.....+|.||
T Consensus        81 l~nHGI~~~li~~~~~~~~~FF~-lP~eeK~k~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~wp  158 (349)
T d1gp6a_          81 LINHGIPADLMERVKKAGEEFFS-LSVEEKEKYANDQATGKIQGYGSKLANN-ASGQLEWEDYFFHLAYPEEKRDLSIWP  158 (349)
T ss_dssp             EESCSCCHHHHHHHHHHHHHHHT-SCHHHHGGGBCBGGGTBCSEEECCCCCS-TTCCCCSCEEEEEEEESGGGCCGGGSC
T ss_pred             EEccCCCHHHHHHHHHHHHHHHc-CCHHHHhhhhcccccCCccccccccccc-cccccchhhhhcccccccccccccccc
Confidence            99999999999999999999999 9999999998765433355665444333 455566666555433344445569999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHhHHHhhcC---cccceeeeecCCCCCCCcCcccCCCCCCCcE
Q 018466          159 SKLIPNYGKVLCDYSDEMKLLCEKLLGFISESLGLTSSYMKDAVGE---LYQNITISYYPPCPQPELTLGLQPHSDFGAL  235 (355)
Q Consensus       159 ~~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~---~~~~lrl~~Yp~~~~~~~~~g~~~HtD~~~l  235 (355)
                      +. ++.|++.+++|+++|.+|+..|+++++++||+++++|.+.+..   ..+.||++|||+++.+...+|+++|||+|+|
T Consensus       159 ~~-~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~l  237 (349)
T d1gp6a_         159 KT-PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSAL  237 (349)
T ss_dssp             CS-STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSE
T ss_pred             cc-cchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcce
Confidence            99 9999999999999999999999999999999999999988753   5678999999999998889999999999999


Q ss_pred             EEEeeCCCCCceeeeCCceEEecCCCCeEEEEcchhhHHHhcCccccccceecCCCCCceeeeEEEeCCCCCcee-ecCc
Q 018466          236 TLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQILTNGEYISAIHRAITNASRARLSVATFHDPAKTVKI-SPAS  314 (355)
Q Consensus       236 TlL~qd~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~l~~~TnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i-~p~~  314 (355)
                      |||+|+.++||||+++|+|++|+|.+|++|||+||+||+||||+||||+|||+.+++++||||+||++|+.|++| +|++
T Consensus       238 TlL~q~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~  317 (349)
T d1gp6a_         238 TFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLP  317 (349)
T ss_dssp             EEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCG
T ss_pred             EEEeccCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCH
Confidence            999999999999999999999999999999999999999999999999999999988999999999999999876 8999


Q ss_pred             cccCCCCCCCCCcccHHHHHHHHHHc
Q 018466          315 ELVSKSSLLRYRQVVYGDYVSSWYTK  340 (355)
Q Consensus       315 ~~~~~~~p~~y~~~t~~e~~~~~~~~  340 (355)
                      +|+++++|++|++||++||++.|+..
T Consensus       318 ~~v~~~~p~~y~~~t~~e~~~~rl~~  343 (349)
T d1gp6a_         318 EMVSVESPAKFPPRTFAQHIEHKLFG  343 (349)
T ss_dssp             GGCCSSSCCSSCCEEHHHHHHHHHHH
T ss_pred             HHcCCCCCCCCCCccHHHHHHHHHhc
Confidence            99999999999999999999998743
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure