Citrus Sinensis ID: 018488

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
MSSSTIPNSFDDVTDFVVNRGNGITGLVDSGIQKVPERYILPPQQRFDLTKVVSQDSILIIDVSNWDDPEVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIKNLLQVLLQGLNVKDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLPESGEIPIYKQLVFSDYFNFYFSKPHDGKKTIDYARI
ccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHccccccccccEEEEEcccccccccccccEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHccccccccEEEcccccccccccccccccccccccccEEEEEcccccEEEEEccccEEEEcccccccEEEEccccHHHHHcccccccccEEEccccccEEEEEEEEccccccEEEcccccccccccccccHHHHHHHHHccccccccccccccc
cccHHHHHHHHccccccccccHHHHHHHHcccccccHHcEcccHcccccccccccccccEEEccccccHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEcccccccccccccHHHHEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEccccccccccccccccHHHHHHHHHHcccccccHHHHccc
mssstipnsfddVTDFVVNRgngitglvdsgiqkvperyilppqqrfdltkvvsqdsiliidvsnwddpeVIKSICEAsgkwgffqiinhgiplqvleNITDAAhsffglpneqrskyykgaspsetvflatsfspqaeVALEWRDYLSfqyipgndqasalwppvckdEVLEYMKKAEIVIKNLLQVLLQGlnvkdfdrdtqhtlmgspriylnyypkcpnpeltagvgphsdiSTITVLLQDdigglyvrgieddtwihvppikgalVINIGDVLQIISNDKYKSIEHRVVANKIknrvsvpifvnpapdavfgplpesgeipiykqlvFSDYfnfyfskphdgkktidyari
mssstipnsfddVTDFVVNRGNGItglvdsgiqkvpeRYILPPQQRFDLTKVVSQDSILIidvsnwddpeVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIpgndqasalWPPVCKDEVLEYMKKAEIVIKNLLQVLLQGLNVKDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLPESGEIPIYKQLVFSDYFNFyfskphdgkktidyari
MSSSTIPNSFDDVTDFVVNRGNGITGLVDSGIQKVPERYILPPQQRFDLTKVVSQDSILIIDVSNWDDPEVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIknllqvllqglnvkDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLPESGEIPIYKQLVFSDYFNFYFSKPHDGKKTIDYARI
**********DDVTDFVVNRGNGITGLVDSGIQKVPERYILPPQQRFDLTKVVSQDSILIIDVSNWDDPEVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGA**SETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIKNLLQVLLQGLNVKDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLPESGEIPIYKQLVFSDYFNFYFSK*************
*****************VNRGNGITGLVDSGIQKVPERYILP**************SILIIDVSNWDDPEVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKY**********FLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIKNLLQVLLQGLNVKDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLPESGEIPIYKQLVFSDYFNFYFSKPHDGKKTIDYARI
********SFDDVTDFVVNRGNGITGLVDSGIQKVPERYILPPQQRFDLTKVVSQDSILIIDVSNWDDPEVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIKNLLQVLLQGLNVKDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLPESGEIPIYKQLVFSDYFNFYFSKPHDGKKTIDYARI
******PNSFDDVTDFVVNRGNGITGLVDSGIQKVPERYILPPQQRFDLTKVVSQDSILIIDVSNWDDPEVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIKNLLQVLLQGLNVKDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLPESGEIPIYKQLVFSDYFNFYFSKPHDGKKTID**RI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSSSTIPNSFDDVTDFVVNRGNGITGLVDSGIQKVPERYILPPQQRFDLTKVVSQDSILIIDVSNWDDPEVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIKNLLQVLLQGLNVKDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLPESGEIPIYKQLVFSDYFNFYFSKPHDGKKTIDYARI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query355 2.2.26 [Sep-21-2011]
Q9C899361 Feruloyl CoA ortho-hydrox yes no 0.969 0.952 0.534 1e-110
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.963 0.947 0.527 1e-110
Q84MB3365 1-aminocyclopropane-1-car no no 0.952 0.926 0.354 2e-52
P10967363 1-aminocyclopropane-1-car N/A no 0.977 0.955 0.336 1e-51
Q9LTH8364 1-aminocyclopropane-1-car no no 0.938 0.914 0.351 3e-48
Q8H1S4369 1-aminocyclopropane-1-car no no 0.912 0.878 0.356 7e-48
Q43383398 1-aminocyclopropane-1-car no no 0.876 0.781 0.345 2e-47
Q9C5K7369 1-aminocyclopropane-1-car no no 0.960 0.924 0.343 2e-47
O04847401 Deacetoxyvindoline 4-hydr N/A no 0.912 0.807 0.326 2e-47
Q9LSW7365 1-aminocyclopropane-1-car no no 0.943 0.917 0.349 6e-46
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function desciption
 Score =  400 bits (1027), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/350 (53%), Positives = 256/350 (73%), Gaps = 6/350 (1%)

Query: 11  DDVTDFVVNRGNGITGLVDSGIQKVPERYILPPQQRFD--LTKVVSQDSILIIDVSNWDD 68
           D VT+FVV+ GNG+ GL ++GI+ +P++YI P ++R      K  S +SI +ID+SN D+
Sbjct: 13  DQVTNFVVHEGNGVKGLSETGIKVLPDQYIQPFEERLINFHVKEDSDESIPVIDISNLDE 72

Query: 69  PEVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETV 128
             V K++C+A+ +WGFFQ+INHG+ ++VLEN+  A H FFGLP E++ K+ +  S S  V
Sbjct: 73  KSVSKAVCDAAEEWGFFQVINHGVSMEVLENMKTATHRFFGLPVEEKRKFSREKSLSTNV 132

Query: 129 FLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIKNLLQV 188
              TSFSP AE ALEW+DYLS  ++    +AS LWP  C+ E LEYM + + ++K LL+ 
Sbjct: 133 RFGTSFSPHAEKALEWKDYLSLFFV-SEAEASQLWPDSCRSETLEYMNETKPLVKKLLRF 191

Query: 189 LLQGLNVKDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGG 248
           L + LNVK+ D+  +   MGS RI LNYYP CPNPELT GVG HSD+S++T+LLQD+IGG
Sbjct: 192 LGENLNVKELDKTKESFFMGSTRINLNYYPICPNPELTVGVGRHSDVSSLTILLQDEIGG 251

Query: 249 LYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVN 308
           L+VR +    W+HVPPI G+LVINIGD +QI+SN +YKS+EHRV+AN   NR+SVPIFV+
Sbjct: 252 LHVRSLTTGRWVHVPPISGSLVINIGDAMQIMSNGRYKSVEHRVLANGSYNRISVPIFVS 311

Query: 309 PAPDAVFGPLP---ESGEIPIYKQLVFSDYFNFYFSKPHDGKKTIDYARI 355
           P P++V GPL    E+GE P+YK ++++DY   +F K HDGKKTID+A I
Sbjct: 312 PKPESVIGPLLEVIENGEKPVYKDILYTDYVKHFFRKAHDGKKTIDFANI 361
2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description
>sp|P10967|ACCH3_SOLLC 1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|Q8H1S4|ACCH3_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1 Back     alignment and function description
>sp|Q43383|ACCH5_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana GN=2A6 PE=2 SV=2 Back     alignment and function description
>sp|Q9C5K7|ACCH2_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1 Back     alignment and function description
>sp|O04847|DV4H_CATRO Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2 Back     alignment and function description
>sp|Q9LSW7|ACCH9_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 9 OS=Arabidopsis thaliana GN=At5g43440 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
224057036358 predicted protein [Populus trichocarpa] 0.974 0.966 0.592 1e-123
225435724358 PREDICTED: 1-aminocyclopropane-1-carboxy 0.963 0.955 0.590 1e-122
225435722358 PREDICTED: 1-aminocyclopropane-1-carboxy 0.963 0.955 0.585 1e-121
388499148361 unknown [Lotus japonicus] 0.997 0.980 0.573 1e-119
358635024358 oxidoreductase [Ipomoea batatas] 0.988 0.980 0.550 1e-118
358635022358 oxidoreductase [Ipomoea batatas] 0.988 0.980 0.544 1e-117
358635028358 oxidoreductase [Ipomoea batatas] 0.997 0.988 0.553 1e-117
358635026358 oxidoreductase [Ipomoea batatas] 0.997 0.988 0.550 1e-116
224052970361 2-oxoglutarate-dependent dioxygenase [Po 0.980 0.963 0.563 1e-116
358635020358 oxidoreductase [Ipomoea batatas] 0.988 0.980 0.542 1e-116
>gi|224057036|ref|XP_002299115.1| predicted protein [Populus trichocarpa] gi|222846373|gb|EEE83920.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/351 (59%), Positives = 267/351 (76%), Gaps = 5/351 (1%)

Query: 8   NSFDDVTDFVVNRGNGITGLVDSGIQKVPERYILPPQQRFDLTKVVSQDSILIIDVSNWD 67
           N   D+TDF +N+GNG+ GL + G++ +P++YI P ++R   TK++S +SI IID+S WD
Sbjct: 10  NDSSDITDFFLNKGNGVKGLSEMGLESLPKQYIQPLEERMCGTKIMSHESIPIIDMSKWD 69

Query: 68  DPEVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSET 127
           DP+V ++ICEA+ KWGFFQIINHG+P++VLEN+ +A H FF LP E++ KY K  SPS  
Sbjct: 70  DPKVAEAICEAAEKWGFFQIINHGVPIEVLENVKEATHQFFRLPAEEKRKYLKEFSPSNN 129

Query: 128 VFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIKNLLQ 187
           V   TSFSP+AE ALEW+DYLS  Y+   D+ASALWP VCKD+VLEYMK++E VI+ LL 
Sbjct: 130 VRFGTSFSPEAEKALEWKDYLSLFYV-SEDEASALWPAVCKDQVLEYMKRSETVIRKLLD 188

Query: 188 VLLQGLNVKDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIG 247
           VL++ LNV + D   +  LMGS R  LNYYP CPNPELT GVG HSD+ST+T LLQDDIG
Sbjct: 189 VLMKNLNVTEIDETKESLLMGSKRTNLNYYPICPNPELTVGVGRHSDVSTLTFLLQDDIG 248

Query: 248 GLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFV 307
           GLYVRG  +D+WIHVPP+ G++VIN+GD LQI+SN +YKSIEHRV+AN   NR+SVPIF+
Sbjct: 249 GLYVRG-NNDSWIHVPPVSGSIVINVGDALQIMSNGRYKSIEHRVIANGSNNRISVPIFI 307

Query: 308 NPAPDAVFGPLPE---SGEIPIYKQLVFSDYFNFYFSKPHDGKKTIDYARI 355
           NP P     P PE    GE  +YK++++SDY   +F K HDGKKTID A+I
Sbjct: 308 NPMPSDKISPFPEVLAGGEKAVYKEVLYSDYVKHFFRKAHDGKKTIDLAKI 358

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225435724|ref|XP_002285698.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225435722|ref|XP_002285699.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|388499148|gb|AFK37640.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|358635024|dbj|BAL22345.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|358635022|dbj|BAL22344.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|358635028|dbj|BAL22347.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|358635026|dbj|BAL22346.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|224052970|ref|XP_002297642.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222844900|gb|EEE82447.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|358635020|dbj|BAL22343.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.963 0.947 0.507 2.2e-98
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.966 0.950 0.512 1.1e-96
TAIR|locus:505006595360 AT5G12270 [Arabidopsis thalian 0.966 0.952 0.480 3.1e-90
TAIR|locus:2090359357 AT3G12900 [Arabidopsis thalian 0.963 0.957 0.443 8.7e-79
TAIR|locus:2009130365 AT1G06620 [Arabidopsis thalian 0.954 0.928 0.347 2.5e-49
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.847 0.862 0.358 5.2e-49
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.898 0.916 0.342 3.7e-48
TAIR|locus:2148403364 AT5G59530 [Arabidopsis thalian 0.932 0.909 0.346 1.8e-46
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.907 0.912 0.318 1.6e-45
TAIR|locus:2009175369 AT1G06650 [Arabidopsis thalian 0.912 0.878 0.350 5.6e-45
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
 Identities = 177/349 (50%), Positives = 250/349 (71%)

Query:    12 DVTDFVVNRGNGITGLVDSGIQKVPERYILPPQQRFDLTKVVSQ--DSILIIDVSNWDDP 69
             +VTDFVV +GNG+ GL ++GI+ +PE+YI P ++R  + K V++  ++I +ID+SN D+ 
Sbjct:    15 EVTDFVVYKGNGVKGLSETGIKALPEQYIQPLEERL-INKFVNETDEAIPVIDMSNPDED 73

Query:    70 EVIKSICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVF 129
              V +++C+A+ KWGFFQ+INHG+PL+VL+++  A H FF LP E++ K+ K  S S TV 
Sbjct:    74 RVAEAVCDAAEKWGFFQVINHGVPLEVLDDVKAATHKFFNLPVEEKRKFTKENSLSTTVR 133

Query:   130 LATSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIXXXXXXX 189
               TSFSP AE ALEW+DYLS  ++    +A   WP +C++E LEY+ K++ ++       
Sbjct:   134 FGTSFSPLAEQALEWKDYLSLFFV-SEAEAEQFWPDICRNETLEYINKSKKMVRRLLEYL 192

Query:   190 XXXXXXXDFDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGGL 249
                    + D   +   MGS R+ LNYYP CPNP+LT GVG HSD+S++T+LLQD IGGL
Sbjct:   193 GKNLNVKELDETKESLFMGSIRVNLNYYPICPNPDLTVGVGRHSDVSSLTILLQDQIGGL 252

Query:   250 YVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNP 309
             +VR +    W+HVPP+ G+ VINIGD +QI+SN  YKS+EHRV+AN   NR+SVPIFVNP
Sbjct:   253 HVRSLASGNWVHVPPVAGSFVINIGDAMQIMSNGLYKSVEHRVLANGYNNRISVPIFVNP 312

Query:   310 APDAVFGPLPE---SGEIPIYKQLVFSDYFNFYFSKPHDGKKTIDYARI 355
              P++V GPLPE   +GE PIY+ +++SDY  ++F K HDGKKT+DYA+I
Sbjct:   313 KPESVIGPLPEVIANGEEPIYRDVLYSDYVKYFFRKAHDGKKTVDYAKI 361
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0019748 "secondary metabolic process" evidence=ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010421 "hydrogen peroxide-mediated programmed cell death" evidence=IMP
GO:0009805 "coumarin biosynthetic process" evidence=RCA;IMP
GO:0051213 "dioxygenase activity" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0010583 "response to cyclopentenone" evidence=RCA
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006595 AT5G12270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090359 AT3G12900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009130 AT1G06620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009175 AT1G06650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9C899F6H2_ARATH1, ., 1, 4, ., 1, 1, ., -0.53420.96900.9529yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.9LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 3e-70
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-68
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 3e-66
PLN02947374 PLN02947, PLN02947, oxidoreductase 2e-65
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-62
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 9e-61
PLN02704335 PLN02704, PLN02704, flavonol synthase 5e-56
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 9e-56
PLN02216357 PLN02216, PLN02216, protein SRG1 6e-53
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 8e-53
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-52
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 4e-48
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 4e-47
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 5e-47
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 6e-45
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 1e-39
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 3e-39
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 3e-36
PLN02997325 PLN02997, PLN02997, flavonol synthase 1e-35
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 2e-32
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-31
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-30
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 8e-30
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 2e-28
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-26
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-21
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 3e-20
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-07
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  222 bits (568), Expect = 3e-70
 Identities = 121/336 (36%), Positives = 194/336 (57%), Gaps = 26/336 (7%)

Query: 25  TGLVDSGIQ--KVPERYILPPQQRFDLTKVVSQDSILIIDVSNWDDPEVIKSICEASGKW 82
           T L+ +GI+   +PE Y+ P  +R  L++V + +++ +ID+ + D  +V++ I +A  ++
Sbjct: 3   TKLLSTGIRHTTLPESYVRPESERPRLSEVSTCENVPVIDLGSPDRAQVVQQIGDACRRY 62

Query: 83  GFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVAL 142
           GFFQ+INHG+  +++E +   AH FF LP E++ K Y    P++T+ L+TSF+ + E   
Sbjct: 63  GFFQVINHGVSAELVEKMLAVAHEFFRLPVEEKMKLYSD-DPTKTMRLSTSFNVRKEKVH 121

Query: 143 EWRDYLSFQYIPGNDQASALW---PPVCKDEVLEYMKKAEIVIKNLLQVLLQGLNV-KDF 198
            WRDYL     P  D+    W   PP  K+ V  Y ++   +   L + + + L + KD+
Sbjct: 122 NWRDYLRLHCYP-LDKYVPEWPSNPPSFKEIVSTYCREVRELGFRLQEAISESLGLEKDY 180

Query: 199 DRDT-----QHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQD-DIGGLYVR 252
            ++      QH       + +NYYP CP PELT G+  H+D + +T+LLQD  + GL V 
Sbjct: 181 IKNVLGEQGQH-------MAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQV- 232

Query: 253 GIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPD 312
            ++D  W+ V P  GA VINIGD LQ +SN +YKS+ HR V N  K R+SV  F+ P  D
Sbjct: 233 -LKDGKWVAVNPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDD 291

Query: 313 AVFGP---LPESGEIPIYKQLVFSDYFNFYFSKPHD 345
           AV  P   L + G   +Y+   +++Y+  ++S+  D
Sbjct: 292 AVISPAKKLTDDGTAAVYRDFTYAEYYKKFWSRNLD 327

Length = 337
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 355
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.89
PLN03176120 flavanone-3-hydroxylase; Provisional 99.87
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.57
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.0
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.05
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 92.99
TIGR02466201 conserved hypothetical protein. This family consis 85.35
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 82.0
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=4.6e-83  Score=617.26  Aligned_cols=328  Identities=32%  Similarity=0.572  Sum_probs=291.3

Q ss_pred             cchHHHHhc-CCCCCCCcccCCCCCCCCccccc-CCCCceeeeCCC---C-CcHHHHHHHHHHhhhcCeEEEEeCCCCHH
Q 018488           22 NGITGLVDS-GIQKVPERYILPPQQRFDLTKVV-SQDSILIIDVSN---W-DDPEVIKSICEASGKWGFFQIINHGIPLQ   95 (355)
Q Consensus        22 ~~v~~l~~~-~~~~vp~~y~~~~~~~~~~~~~~-~~~~iPvIDl~~---~-~~~~~~~~l~~A~~~~GFF~v~nhGi~~~   95 (355)
                      ..||.|+.. ++++||++|++|+++++...... ...+||||||+.   . .+.+++++|++||++||||||+||||+.+
T Consensus        15 ~~~~~~~~~~~~~~~p~~~v~p~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~   94 (357)
T PLN02216         15 PSVQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSS   94 (357)
T ss_pred             hhHHHHHhcCCCCCCCHhhCcCcccCCccccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCCHH
Confidence            358999876 88999999999999887532111 125799999986   1 23578999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCHHHHhccccCCCCCCccccccCCCCCcccccCccccccceecCCCCCCCCCCC---CCcHHHHH
Q 018488           96 VLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWP---PVCKDEVL  172 (355)
Q Consensus        96 l~~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP---~~fr~~~~  172 (355)
                      +++++++++++||+||.|+|+++....  +..+||+........++.||+|.|.+...|......+.||   +.||++++
T Consensus        95 li~~~~~~~~~FF~LP~eeK~k~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~p~~fr~~~~  172 (357)
T PLN02216         95 FLDKVKSEIQDFFNLPMEEKKKLWQRP--GEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDTLE  172 (357)
T ss_pred             HHHHHHHHHHHHHcCCHHHHHhhhcCC--CCccccCccccccccccCCceeeeeeeccCcccccchhcccchHHHHHHHH
Confidence            999999999999999999999997654  4578996554444456789999998876665444678896   58999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCC-CCccccccccC-CCCeeeeccCCCCCCCccCCCccccccCCCeEEEee-CCCCCc
Q 018488          173 EYMKKAEIVIKNLLQVLLQGLNVK-DFDRDTQHTLM-GSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQ-DDIGGL  249 (355)
Q Consensus       173 ~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~~~~-~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL~q-d~v~GL  249 (355)
                      +|+++|.+|+.+||++||++|||+ ++|  .+.+.. ..+.||+||||||++++.++|+++|||+|+||||+| ++++||
T Consensus       173 ~y~~~~~~l~~~ll~~la~~Lgl~~~~f--~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GL  250 (357)
T PLN02216        173 TYSAEVKSIAKILFAKMASALEIKPEEM--EKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGL  250 (357)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCce
Confidence            999999999999999999999999 999  887765 357899999999999999999999999999999999 579999


Q ss_pred             eeEecCCCeeEEeCCCCCcEEEEecchhHHhhcCccccccccccCCCCCceeEEEEEeccCCCCEEeCCC---CCCCCCC
Q 018488          250 YVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVFGPLP---ESGEIPI  326 (355)
Q Consensus       250 qV~~~~~g~W~~V~p~~g~~vVnvGD~le~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~P~~---~~~~p~~  326 (355)
                      ||+  ++|+|++|+|+||++||||||+||+||||+|||++|||++++.++||||+||++|+.|++|.|++   ++++|++
T Consensus       251 QV~--~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~  328 (357)
T PLN02216        251 QIK--KDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAAL  328 (357)
T ss_pred             eEE--ECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCC
Confidence            999  89999999999999999999999999999999999999998888999999999999999999998   6788999


Q ss_pred             CCCccHHHHHHHHHhCCCCCCCcccccCC
Q 018488          327 YKQLVFSDYFNFYFSKPHDGKKTIDYARI  355 (355)
Q Consensus       327 y~~~t~~ey~~~~~~~~~~~~~~l~~~~~  355 (355)
                      |+++||+||+..++++.+.+++.++.+||
T Consensus       329 Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~  357 (357)
T PLN02216        329 FKSLTTKEYFDGLFSRELDGKAYLDAMRI  357 (357)
T ss_pred             CCCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence            99999999999999999999999999986

>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-37
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-37
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 2e-36
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-29
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 1e-11
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-11
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 2e-04
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 2e-04
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  152 bits (384), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 149/315 (47%), Gaps = 20/315 (6%)
Query: 24  ITGLVDSGIQKVPERYILPPQQRFDLTKVVSQDS------ILIIDVSNWD-DPEVIKSIC 76
           +  L  SGI  +P+ YI P ++   +  V  ++       +  ID+ N + D E I+  C
Sbjct: 6   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 65
Query: 77  -----EASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLA 131
                +AS  WG   +INHGIP  ++E +  A   FF L  E++ KY    +  +     
Sbjct: 66  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 125
Query: 132 TSFSPQAEVALEWRDYLSFQYIPGNDQASALWPPVCKDEVLEYMKKAEIVIXXXXXXXXX 191
           +  +  A   LEW DY      P   +  ++WP    D +    + A+ +          
Sbjct: 126 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 185
Query: 192 XXXXXDFDRDTQHTLMGS-----PRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDI 246
                  + D     +G       ++ +NYYPKCP PEL  GV  H+D+S +T +L + +
Sbjct: 186 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMV 245
Query: 247 GGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIF 306
            GL +    +  W+    +  ++V++IGD L+I+SN KYKSI HR + NK K R+S  +F
Sbjct: 246 PGLQL--FYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVF 303
Query: 307 VNPAPDA-VFGPLPE 320
             P  D  V  PLPE
Sbjct: 304 CEPPKDKIVLKPLPE 318
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-125
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-110
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 4e-75
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-74
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-68
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 6e-65
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  362 bits (931), Expect = e-125
 Identities = 97/351 (27%), Positives = 158/351 (45%), Gaps = 27/351 (7%)

Query: 26  GLVDSGIQKVPERYILPPQQRFDLTKVV------SQDSILIIDVSNWDDP------EVIK 73
            L  SGI  +P+ YI P ++   +  V           +  ID+ N +          I+
Sbjct: 9   SLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIE 68

Query: 74  SICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATS 133
            + +AS  WG   +INHGIP  ++E +  A   FF L  E++ KY    +  +     + 
Sbjct: 69  ELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSK 128

Query: 134 FSPQAEVALEWRDYLSFQYIPGNDQASALWP---PVCKDEVLEYMKKAEIVIKNLLQVLL 190
            +  A   LEW DY      P   +  ++WP       +   EY K   ++   + + L 
Sbjct: 129 LANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALS 188

Query: 191 QGLNVKD--FDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGG 248
            GL ++    +++         ++ +NYYPKCP PEL  GV  H+D+S +T +L + + G
Sbjct: 189 VGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPG 248

Query: 249 LYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVN 308
           L +    +  W+    +  ++V++IGD L+I+SN KYKSI HR + NK K R+S  +F  
Sbjct: 249 LQLF--YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCE 306

Query: 309 PAPDA-VFGPLPE---SGEIPIYKQLVFSDYFNFYFSKPHDGKKTIDYARI 355
           P  D  V  PLPE         +    F+ +          GK+  +    
Sbjct: 307 PPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKL----FGKEQEELVSE 353
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query355
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.76
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 92.59
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 87.29
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 85.75
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 85.23
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2.7e-82  Score=612.35  Aligned_cols=324  Identities=29%  Similarity=0.527  Sum_probs=286.8

Q ss_pred             CcchHHHHhcCCCCCCCcccCCCCCCCCcccc--cC----CCCceeeeCCC--C----CcHHHHHHHHHHhhhcCeEEEE
Q 018488           21 GNGITGLVDSGIQKVPERYILPPQQRFDLTKV--VS----QDSILIIDVSN--W----DDPEVIKSICEASGKWGFFQII   88 (355)
Q Consensus        21 ~~~v~~l~~~~~~~vp~~y~~~~~~~~~~~~~--~~----~~~iPvIDl~~--~----~~~~~~~~l~~A~~~~GFF~v~   88 (355)
                      ..+||+|+++++.+||++|++|+++++.....  ..    ..+||||||+.  .    .+.+++++|.+||++||||||+
T Consensus         4 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             cccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            46899999999999999999998777653210  11    24699999987  2    1456899999999999999999


Q ss_pred             eCCCCHHHHHHHHHHHHHHhCCCHHHHhccccCCCCCCccccccCCCCCcccccCccccccceecCCCCCCCCCCC---C
Q 018488           89 NHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWP---P  165 (355)
Q Consensus        89 nhGi~~~l~~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP---~  165 (355)
                      ||||+.++++++++.+++||+||.|+|+++........++||+........+..||+|+|++...|......|.||   +
T Consensus        84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~  163 (356)
T 1gp6_A           84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  163 (356)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence            9999999999999999999999999999998754213578997655444567889999999987665434568897   5


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCcccccccc---CCCCeeeeccCCCCCCCccCCCccccccCCCeEEE
Q 018488          166 VCKDEVLEYMKKAEIVIKNLLQVLLQGLNVK-DFDRDTQHTL---MGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVL  241 (355)
Q Consensus       166 ~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~~~---~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL  241 (355)
                      .||+.+++|+++|.+|+.+||++|+++|||+ ++|  .+.+.   ...+.||+||||||++++..+|+++|||+|+||||
T Consensus       164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f--~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL  241 (356)
T 1gp6_A          164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRL--EKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI  241 (356)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHH--HHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence            8999999999999999999999999999999 999  88876   36678999999999999999999999999999999


Q ss_pred             eeCCCCCceeEecCCCeeEEeCCCCCcEEEEecchhHHhhcCccccccccccCCCCCceeEEEEEeccCCCC-EEeCCC-
Q 018488          242 LQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDA-VFGPLP-  319 (355)
Q Consensus       242 ~qd~v~GLqV~~~~~g~W~~V~p~~g~~vVnvGD~le~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~-~i~P~~-  319 (355)
                      +||+++||||+  ++|+|++|+|+||+|||||||+||+||||+|||++|||++++.++|||++||++|+.|+ +|+|++ 
T Consensus       242 ~qd~v~GLQV~--~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~  319 (356)
T 1gp6_A          242 LHNMVPGLQLF--YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPE  319 (356)
T ss_dssp             EECSCCCEEEE--ETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGG
T ss_pred             EEcCCCCeEEe--cCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChh
Confidence            99999999999  79999999999999999999999999999999999999999888999999999999999 999998 


Q ss_pred             --CCCCCCCCCCccHHHHHHHHHhCCCCCCC
Q 018488          320 --ESGEIPIYKQLVFSDYFNFYFSKPHDGKK  348 (355)
Q Consensus       320 --~~~~p~~y~~~t~~ey~~~~~~~~~~~~~  348 (355)
                        ++++|++|+++||+||+..++.++++|+.
T Consensus       320 ~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~  350 (356)
T 1gp6_A          320 MVSVESPAKFPPRTFAQHIEHKLFGKEQEEL  350 (356)
T ss_dssp             GCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred             hcCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence              67789999999999999999988777654
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 355
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 6e-63
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-55
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 9e-51
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-36
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  202 bits (514), Expect = 6e-63
 Identities = 97/342 (28%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 26  GLVDSGIQKVPERYILPPQQRFDLTKVVSQD------SILIIDVSNWDDP------EVIK 73
            L  SGI  +P+ YI P ++   +  V  ++       +  ID+ N +          I+
Sbjct: 8   SLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIE 67

Query: 74  SICEASGKWGFFQIINHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATS 133
            + +AS  WG   +INHGIP  ++E +  A   FF L  E++ KY    +  +     + 
Sbjct: 68  ELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSK 127

Query: 134 FSPQAEVALEWRDYLSFQYIPGNDQASALW---PPVCKDEVLEYMKKAEIVIKNLLQVLL 190
            +  A   LEW DY      P   +  ++W   P    +   EY K   ++   + + L 
Sbjct: 128 LANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALS 187

Query: 191 QGLNVKD--FDRDTQHTLMGSPRIYLNYYPKCPNPELTAGVGPHSDISTITVLLQDDIGG 248
            GL ++    +++         ++ +NYYPKCP PEL  GV  H+D+S +T +L + + G
Sbjct: 188 VGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPG 247

Query: 249 LYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVN 308
           L +    +  W+    +  ++V++IGD L+I+SN KYKSI HR + NK K R+S  +F  
Sbjct: 248 LQLF--YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCE 305

Query: 309 PAPDA-VFGPLPE---SGEIPIYKQLVFSDYFNF-YFSKPHD 345
           P  D  V  PLPE         +    F+ +     F K  +
Sbjct: 306 PPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQE 347
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query355
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 87.63
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.3e-77  Score=574.65  Aligned_cols=317  Identities=29%  Similarity=0.532  Sum_probs=277.7

Q ss_pred             CcchHHHHhcCCCCCCCcccCCCCCCCCccc------ccCCCCceeeeCCC--C----CcHHHHHHHHHHhhhcCeEEEE
Q 018488           21 GNGITGLVDSGIQKVPERYILPPQQRFDLTK------VVSQDSILIIDVSN--W----DDPEVIKSICEASGKWGFFQII   88 (355)
Q Consensus        21 ~~~v~~l~~~~~~~vp~~y~~~~~~~~~~~~------~~~~~~iPvIDl~~--~----~~~~~~~~l~~A~~~~GFF~v~   88 (355)
                      ...||+|+++|+.+||++||+|+.+++....      .....+||||||+.  .    .+++++++|.+||++||||||+
T Consensus         3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           3 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             CcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            4579999999999999999999998887532      12346899999987  1    2567899999999999999999


Q ss_pred             eCCCCHHHHHHHHHHHHHHhCCCHHHHhccccCCCCCCccccccCCCCCcccccCccccccceecCCCCCCCCCCC---C
Q 018488           89 NHGIPLQVLENITDAAHSFFGLPNEQRSKYYKGASPSETVFLATSFSPQAEVALEWRDYLSFQYIPGNDQASALWP---P  165 (355)
Q Consensus        89 nhGi~~~l~~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP---~  165 (355)
                      ||||+.++++++++++++||+||.|+|++|......+.+.||+...........+|.+.+.....+......+.||   +
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~  162 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  162 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccc
Confidence            9999999999999999999999999999998765424455666555555566678877765544454444668896   6


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCccccccccC---CCCeeeeccCCCCCCCccCCCccccccCCCeEEE
Q 018488          166 VCKDEVLEYMKKAEIVIKNLLQVLLQGLNVK-DFDRDTQHTLM---GSPRIYLNYYPKCPNPELTAGVGPHSDISTITVL  241 (355)
Q Consensus       166 ~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~~~~---~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTlL  241 (355)
                      .|++.+++|+++|.+|+.+|+++++++||++ ++|  .+.+..   ..+.||++||||++.++..+|+++|||+|+||||
T Consensus       163 ~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~--~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL  240 (349)
T d1gp6a_         163 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRL--EKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI  240 (349)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHH--HHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHH--HHHhccccccceeeeecccccccchhhccccccCCCCcceEEE
Confidence            8999999999999999999999999999999 988  766642   4568999999999999999999999999999999


Q ss_pred             eeCCCCCceeEecCCCeeEEeCCCCCcEEEEecchhHHhhcCccccccccccCCCCCceeEEEEEeccCCCCEE-eCCC-
Q 018488          242 LQDDIGGLYVRGIEDDTWIHVPPIKGALVINIGDVLQIISNDKYKSIEHRVVANKIKNRVSVPIFVNPAPDAVF-GPLP-  319 (355)
Q Consensus       242 ~qd~v~GLqV~~~~~g~W~~V~p~~g~~vVnvGD~le~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i-~P~~-  319 (355)
                      +|+.++||||+  .+|+|++|+|.+|++|||+||+||+||||+|||++|||+.+++++||||+||++|+.|++| +|++ 
T Consensus       241 ~q~~~~GLqv~--~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~  318 (349)
T d1gp6a_         241 LHNMVPGLQLF--YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPE  318 (349)
T ss_dssp             EECSCCCEEEE--ETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGG
T ss_pred             eccCCcceeee--cCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHH
Confidence            99999999998  7999999999999999999999999999999999999999999999999999999999865 8998 


Q ss_pred             --CCCCCCCCCCccHHHHHHHHHh
Q 018488          320 --ESGEIPIYKQLVFSDYFNFYFS  341 (355)
Q Consensus       320 --~~~~p~~y~~~t~~ey~~~~~~  341 (355)
                        ++++|++|+++|++||++.++.
T Consensus       319 ~v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         319 MVSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             GCCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             HcCCCCCCCCCCccHHHHHHHHHh
Confidence              7789999999999999999874
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure